Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A0 F0 I1 R1
|
4926 |
296.4 |
4517418 |
96.8% |
4372860 |
264.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
794,048 |
3 bp→CGA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 794,048 | 0 | G | C | 99.3%
| 644.5
/ NA
| 274 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base C (126/145); total (127/147) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 794,049 | 0 | C | G | 99.6%
| 645.2
/ NA
| 274 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base G (126/147); total (127/147) |
| Fisher's exact test for biased strand distribution p-value = 4.64e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 794,050 | 0 | T | A | 99.6%
| 650.8
/ NA
| 274 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base A (126/147); total (127/147) |
| Fisher's exact test for biased strand distribution p-value = 4.64e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 274 total aligned reads displayed.
GCAGACGAGAAATATTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CGCTAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCGCTCTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGACTCTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGT > CP042583/793769‑794326
|||
cGAGAAATATTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCt < 1:247262/288‑1 (MQ=255)
ccACCGTTGGGAGATGACGCTTTGCTGTTTTCACCAGCGGGTTAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGTGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTCTTACGGATTTGTATAATTATTTTGCGTCAGCTAAACCATCAAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGGCCGCT‑GTAATGGCCTGGCGACAACCGTGaa > 2:1674887/1‑288 (MQ=255)
ccAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTgg < 2:1563372/276‑1 (MQ=255)
cAACGTTGGGAGATGACGCTTTGCTTTTTTAACCCGCGGGTTAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGAt < 1:1902953/288‑1 (MQ=255)
aTGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGc > 2:2044869/1‑288 (MQ=255)
gACGCTTTGCTGTTTTAACCAGCGGGTTAAATCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCAATATTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTAAGCTAAACCATCGCGTTAGCTTTCAGCATCAAGTGCTTCCATGCAGTCTGTA‑CCGG‑CCGAAGTAATGACATTGCAAATAATTTGATTCATCCCTTCGCCt > 2:1551448/1‑288 (MQ=255)
cTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGc > 1:1589498/1‑289 (MQ=255)
ttttAACCAGCGGGTTAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTCCTTTTGTTACTTATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCATGTCGCCTGCGGCAAAGACGc < 1:2181407/289‑1 (MQ=255)
ttttAACCAGCGGGTTAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACg > 2:2171167/1‑288 (MQ=255)
tttAACCAGCGGGTTAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGcc < 2:2112413/289‑1 (MQ=255)
aCCAGCGGGTTAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGa > 2:1838511/1‑289 (MQ=255)
cGGGTTAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTTATCCATACCGTCGCCTGCGGCAAAGCCGCCAGGAAt > 2:1728698/1‑286 (MQ=255)
cGGGTTAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAAt > 2:1306748/1‑286 (MQ=255)
cGGGTTAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCAGGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAACCCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCACCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGACACATCACCTCGCCCGCGGGCACGCCGCCAGGAATGc > 2:330730/1‑288 (MQ=255)
ttAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGt < 2:425186/288‑1 (MQ=255)
ttAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGCTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGt < 1:676648/288‑1 (MQ=255)
ttAACTATTTTTGACGTGATTGTTTCATTGCACGCTTAGCAGGTTAGTTATAAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGAATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGt < 1:1551448/288‑1 (MQ=255)
cttttttttACGTGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTggg < 2:1493312/286‑1 (MQ=255)
tttGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCa < 2:243138/289‑1 (MQ=255)
tttGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGAGATCCATCCAGTCGCCTGCGGCGAAGACGACAAGAATGCTGGCCTGGGTGGcg > 2:2079212/1‑288 (MQ=255)
ttGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCTTGGTGTCGCATTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCTTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGAAGCCCGGAATGCTGGTCTGGGTGGcct > 1:1538789/1‑287 (MQ=255)
gaggagaTTTATTACTTGCCCGCTTAGAAGGTGAGTTATCAGAATTCTTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGAACCGTAGTAGCATTGTGTAGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCACGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTa < 2:1863796/286‑1 (MQ=255)
tttATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGaa < 2:682942/289‑1 (MQ=255)
tGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATAcccg > 2:199344/1‑284 (MQ=255)
tGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATAcccg > 2:1499178/1‑284 (MQ=255)
gCACGCTTAGCAGGTAAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATAcccgactg < 2:151918/289‑7 (MQ=255)
ttAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGTTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTg < 1:1666734/257‑1 (MQ=255)
aGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCa > 1:687073/1‑253 (MQ=255)
aGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGt > 1:1980304/1‑284 (MQ=255)
aGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCg > 2:106402/1‑289 (MQ=255)
aGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCg > 1:1300892/1‑289 (MQ=255)
ttATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATa < 1:1502604/263‑1 (MQ=255)
ttATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTCTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATa > 2:576951/1‑263 (MQ=255)
attattTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTttccagt < 1:2241778/288‑1 (MQ=255)
tattTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCa > 2:1658671/1‑241 (MQ=255)
cAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCg < 2:503191/289‑1 (MQ=255)
cAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGGACTTTGATGTAGCCGTTTTCCGGTTCCAACTGCCCTTCGAAAATc > 1:1692832/1‑288 (MQ=255)
cGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTATAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAg < 1:1315082/289‑1 (MQ=255)
gggAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCAc < 2:1010430/174‑1 (MQ=255)
gggAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTa > 2:1126450/1‑289 (MQ=255)
gggAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTa > 1:1795872/1‑289 (MQ=255)
gggAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTa > 2:636709/1‑289 (MQ=255)
gggAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTa > 1:2047964/1‑289 (MQ=255)
aaaaaaTAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTAtt < 2:1926459/288‑1 (MQ=255)
aaaTAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCggg < 1:1126450/289‑1 (MQ=255)
aaaTAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCggg < 1:1728698/289‑1 (MQ=255)
tAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCtg < 2:2221814/289‑1 (MQ=255)
cGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGAcc < 1:636709/288‑1 (MQ=255)
gACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGa < 1:2043950/289‑1 (MQ=255)
aCCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGAt > 2:306676/1‑289 (MQ=255)
cATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGc < 1:984856/289‑1 (MQ=255)
cGCATGGTGTTGCCTTCTTTCCTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCaacaaa < 1:1891881/289‑1 (MQ=255)
cATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCaaa > 2:778863/1‑161 (MQ=255)
cATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCaaa < 1:778863/161‑1 (MQ=255)
cATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCaaa > 1:1034487/1‑161 (MQ=255)
cATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATAcccga > 1:195880/1‑203 (MQ=255)
cATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATAcccga < 2:850160/206‑4 (MQ=255)
cATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGaa > 2:1234250/1‑251 (MQ=255)
cATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGaa < 1:1234250/251‑1 (MQ=255)
cATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTAtt < 1:1446603/263‑1 (MQ=255)
cATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCaacaaaca > 2:1572778/1‑289 (MQ=255)
tGGTGTCGCCTTCTTTACTTTTTTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAg < 2:1964661/288‑1 (MQ=255)
tGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAg > 1:1566255/1‑288 (MQ=255)
tGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGa < 1:936199/289‑1 (MQ=255)
ggTGTCTCCTTGTTTACTGTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGAc < 2:960945/289‑1 (MQ=255)
tCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATAcc > 1:468960/1‑196 (MQ=255)
tCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATAcc < 2:468960/196‑1 (MQ=255)
cGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGc < 1:185502/288‑1 (MQ=255)
tcttTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTTGTACCGATAGCAACACACAGAcctccaagcgc > 2:1545908/1‑280 (MQ=255)
cttTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTgg > 1:1496288/1‑164 (MQ=255)
cttTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATAcccgact < 2:924000/194‑6 (MQ=255)
cttTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATAcccgact > 1:924000/1‑189 (MQ=255)
ttttCTTTTGTTACTGATTTGTAAAATTATTTTGCGTCATCCAAACCATCGAGGTAGCGTTCCTCAGCAAGTGCTGCCATGCAGCATGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGTGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCga < 2:370516/289‑1 (MQ=255)
tttACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCga > 1:2231788/1‑289 (MQ=255)
gTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTAtt > 1:371948/1‑239 (MQ=255)
ttACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCa < 1:214869/164‑1 (MQ=255)
gATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAAc < 2:1807331/269‑1 (MQ=255)
tGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTC‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGTAACGTCGAGTGACTCGATGTTATCGCt < 1:406819/289‑1 (MQ=255)
tGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATAAAGGGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCt < 1:1837056/289‑1 (MQ=255)
ttattTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAg < 1:220183/249‑1 (MQ=255)
ttattTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAg > 2:2240096/1‑249 (MQ=255)
cgtgcgccaaaCCATCGCAGTAGCGTTCACCTTGACGTACTGCCCAGCAGGCTTGA‑CCAG‑CCGAAATAATGACTTGGCGATAGATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTTGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATcgcg < 2:1211019/281‑1 (MQ=255)
cGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGca < 1:859058/233‑1 (MQ=255)
ggTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGa < 1:532592/288‑1 (MQ=255)
gTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGac < 1:2097273/288‑1 (MQ=255)
cGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCg < 1:1392325/153‑1 (MQ=255)
cGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCg > 2:1392325/1‑153 (MQ=255)
cGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGa > 1:1946846/1‑289 (MQ=255)
cGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGa > 2:698646/1‑289 (MQ=255)
gCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGa < 1:822714/199‑1 (MQ=255)
gCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGa > 2:822714/1‑199 (MQ=255)
cATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGAt > 1:1199468/1‑288 (MQ=255)
cAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCgg > 1:1138961/1‑213 (MQ=255)
ccATGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGaca < 1:727448/266‑1 (MQ=255)
tGCAGCCTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACttcttc < 1:1092577/289‑1 (MQ=255)
tGCAGCCTGGA‑CCGG‑CGGAAGTGATGGCCGGGTGATAACTTTGATCCAGCCCGTCGGCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACttcttc < 2:1163206/289‑1 (MQ=255)
cTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCg < 1:330730/288‑1 (MQ=255)
cTGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCg < 2:134464/288‑1 (MQ=255)
tGTA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACg < 1:1008319/243‑1 (MQ=255)
tA‑CCGG‑CCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACttcttc < 1:605297/280‑1 (MQ=255)
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GCAGACGAGAAATATTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTA‑CCGG‑CGCTAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCGCTCTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGACTCTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGT > CP042583/793769‑794326
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
