Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 805,791 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583805,7910AT99.6% 570.9 / NA 243intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base T (126/115);  total (127/116)
Fisher's exact test for biased strand distribution p-value = 4.79e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01
*CP042583805,7920GC99.6% 566.1 / NA 243intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (127/115);  total (127/116)
Fisher's exact test for biased strand distribution p-value = 4.77e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583805,7930CG99.6% 562.5 / NA 243intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base G (127/115);  total (127/116)
Fisher's exact test for biased strand distribution p-value = 4.77e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 243 total aligned reads displayed.

AGGTGATTAAACCGCGCTTTGAATGTAAGACCATCTATGAAATGACCAGCGAACTGGCAAAACGTCTTGGCGTTGAGCAACAGTTTACTGAAGGCCGTACCCAGGAAGAGTGGATGCGGCATCTGTATGCCCAGAGCCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCAAGCGG‑CAAAATTGAGATTTATAGCCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACAGTACTTACGGCAACGTTGATGTGCTGAAAGCGGCTTGCCGTCAGGAAATGTGGATCAACCCGCTTGATGCCCAAAAACGCGGTATCCACAACGGCGAT  >  CP042583/805516‑806072
                                                                                                                                                                                                                                                                                   |||                                                                                                                                                                                                                                                                                        
aGGTGATTAAACCGCGCTTTGAATGTAAGACCATCTATGAAATGACCAGCGAACTGGCAAAACGTCTTGGCGTTGAGCAACAGTTTACTGAAGGCCGTACCCAGGAAGAGTGGATGCGGCATCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTCTGCCATCGGG‑CAAAATTga                                                                                                                                                                                                                                                                              >  2:2418/1‑289 (MQ=255)
      ttAAACCGCGCTTTGAATGTAAGACCATCTATGAAATGACCAGCGAACTGGCAAAACGTCTTGGCGTTGAGCAACAGTTTACTGAAGGCCGTACCCAGGAAGAGTGGATGCGGCATCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGAttt                                                                                                                                                                                                                                                                         <  1:2215295/288‑1 (MQ=255)
        aaaCCGCGCTTTGAATGTAAGACCATCTATGAAATGACCAGCGAACTGGCAAAACGTCTTGGCGTTGAGCAACAGTTTACTGAAGGCCGTACCCAGGAAGAGTGGATGCGGCATCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATAACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTtatt                                                                                                                                                                                                                                                                      >  1:146942/1‑288 (MQ=255)
            cgcgCTTTGAATGTAAGACCATCTATGAAATTACCAGCGAACTGGCAAAACGTCTTGGCGTTGAGCAACAGTGTACTGAAGGCCGTACCCAGGAAGAGTGGATGCGGCATCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTtattcgca                                                                                                                                                                                                                                                                  <  2:1606745/289‑6 (MQ=255)
            cgcgCTTTGAATGTAAGACCATCTATGAAATGACCAGCGAACTGGCAAAACGTCTTGGCGTTGAGCAACAGTTTACTGAAGGCCGTACCCAGGAAGAGTGGATGCGGCATCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTtattcgca                                                                                                                                                                                                                                                                  >  2:1934204/1‑284 (MQ=255)
               gcTTTGAATGTAAGACCATCTATGAAATGACCAGCGAACTGGCAAAACGTCTTGGCGTTGAGCAACAGTTTACTGAAGGCCGTACCCAGGAAGAGTGGATGCGGCATCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGCTGCTTAAAAAGCCTTCCGTGACACACCGCAGCCAAACCCACTGACTACGCCCTCGGG‑CAAAATTAAGATTgattcgaagcc                                                                                                                                                                                                                                                               >  2:1331905/1‑281 (MQ=255)
                                 tCTATGAAATGACCAGCGAACTGGCAAAACGTCTTGGCGTTGAGCAACAGTTTACTGAAGGCCGTACCCAGGAAGAGTGGATGCGGCATCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGgcg                                                                                                                                                                                                                                                              <  1:1351749/272‑1 (MQ=255)
                                 tCTATGAAATGACCAGCGAACTGGCAAAACGTCTTGGCGTTGAGCAACAGTTTACTGAAGGCCGTACCCAGGAAGAGTGGATGCGGCATCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCg                                                                                                                                                                                                                                              >  2:1969772/1‑288 (MQ=255)
                                 tCTATGAAATGACCAGCGAACTGGCAAAACGTCTTGGCGTGGAGCAACAGTTTACTGAAGGCCGTACCCAGGAAGAGTGGATGCGGCATCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGc                                                                                                                                                                                                                                             <  1:517479/289‑1 (MQ=255)
                                            aCCAGCGAACTGGCAAAACGTCTTGGCGTTGAGTAACAGTTTACTGAAGGCCGTACCCAGTAAGAGTCGATGCGGCATCTGTATTCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGCTCCGCAAGCAGGGGACCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAAt                                                                                                                                                                                                                                  >  1:940498/1‑289 (MQ=255)
                                            aCCAGCGAACTGGCAAAACGTCTTGGCGTTGAGCAACAGTTTACTGAAGGCCGTACCCAGGAAGAGTGGATGCGGCATCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCg                                                                                                                                                                                                                                              >  1:499418/1‑277 (MQ=255)
                                            aCCAGCGAACTGGCAAAACGTCTTGGCGTTGAGCAACAGTTTACTGAAGGCCGTACCCAGGAAGAGTGGATGCGGCATCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCg                                                                                                                                                                                                                                              <  2:499418/277‑1 (MQ=255)
                                             ccAGCGAACTGGCAAAACGTCTTGGCGTTGAGCAACAGTTTACTGAAGGCCGTACCCAGGAAGAGTGGATGCGGCATCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAAtt                                                                                                                                                                                                                                 >  2:1873332/1‑289 (MQ=255)
                                             ccAGCGAACTGGCAAAACGTCTTGGCGTTGAGCAACAGTTTACTGAAGGCCGTACCCAGGAAGAGTGGATGCGGCATCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAAtt                                                                                                                                                                                                                                 >  1:555490/1‑289 (MQ=255)
                                                          aagaCGTCGTGGCGGGGGGCAGCAGTGGACGGGAGGCCGGACCGAGGAAGAGTTGATGCGGCATCTGTATGGCCAGTAGCGGGAAGCGTGTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGCTCTTTAAAAAGCGCGA‑CCACAAGGGCATCACGTTGAGTAGAAAGCCTTCCGTGAAGATCCGCAGGCAAACACACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGAt                                                                                                                                                                                                                    <  2:719190/285‑1 (MQ=255)
                                                          aaaaCGTCTTGGCGTTGAGCAACAGTTTACTGAAGGCCGTACCCAGGAAGAGTGGATGCGGCATCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGAt                                                                                                                                                                                                                    <  1:367609/289‑1 (MQ=255)
                                                               gTCTTGGCGTTGAGCAACAGTTTACTGAAGGCCGTACCCAGGAAGAGTGGATGCGGCATCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTgat                                                                                                                                                                                                               <  1:1985544/289‑1 (MQ=255)
                                                               gTCTTGGCGTTGAGCAACAGTTTACTGAAGGCCGTACCCAGGAAGAGTGGATGCGGCATCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTgat                                                                                                                                                                                                               <  1:1741315/289‑1 (MQ=255)
                                                                    ggCGTTGAGCAACGGTTTACTGAAGGCCTAACCCAGGAAGAGGGGATGCGGCATCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTgatcgatc                                                                                                                                                                                                          <  1:1883380/289‑1 (MQ=255)
                                                                    ggCGTTGAGCAACAGTTTACTGAAGGCCGTACCCAGGAAGAGTGGATGCGGCATCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTgatcgatc                                                                                                                                                                                                          <  2:2243920/289‑1 (MQ=255)
                                                                    ggCGTTGAGCAACAGTTTACTGAAGGCCGTACCCAGGAAGAGTGGATGCGGCATCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTgatcgatc                                                                                                                                                                                                          <  1:1158885/289‑1 (MQ=255)
                                                                        ttGAGCAACAGTTTACTGAAGGCCGTACCCAGGAAGAGTGGATGCGGCATCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGc                                                                                                                                                                                                                       <  1:2256740/272‑1 (MQ=255)
                                                                            gCAACAGTTTACTGAAGGCCGTACCCAGGAAGAGTGGATGCGGCATCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGcc                                                                                                                                                                                                   <  1:155703/288‑1 (MQ=255)
                                                                              aaCAGTTTACTGAAGACCGTACCCTGGAGTTGTGGATGCGGCATCTGTATGCCCAGTCGCGTGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTGAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGTCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCTCAGTCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGTCGATGTTATCGATCCACTGCCGa                                                                                                                                                                                                 <  2:259965/288‑1 (MQ=255)
                                                                                     tACTGAAGGCCGTACCCAGGAAGAGTGGATGCGGCATCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCgctggc                                                                                                                                                                                                                                                         >  2:212735/1‑225 (MQ=255)
                                                                                             gCCGTACCCCGGAAGAGTGGATGCGGCATATGTATGCCCAATCGCGGGATGCGATTCCTGAACTGCCAACGTTTGAAGAGTTTCGCCAGCAGGGGATCTTTAAAAAGCCCGACCCACGAGGGCCTCGCGTTGCGTATAAGGCCTGCCGTAAGTCTCCGCAGGCGAACCCACTCACCACGCGATCGGA‑CAAACTTGGGATTGATTCGCAGGCGCTGGCTTACATTGCCGCTACCTGGGAATTGCCTGAAGGCGTATCGACCGCTCCGCTCCCGATCGAACCGCCGTGCtt                                                                                                                                                                                 >  2:1583247/1‑289 (MQ=255)
                                                                                               cGTACCCAGGAAGAGTGGATGCGGCATCTGTATGCCCAGTCGCGCGCAGCGATTCCTGAACTGCCACCGTTTGAAGACTTCCGCAAGCAGGGGCACTTTAAAAAGCGCGACCCCCAAGGGCACCACGTTGCTTATAACGCCTTCCGTGAAGAGCCGAAGGCAAACCCCCTGACCACGCCAGCGGG‑CAAAATTGAGATTTATTCGCAGGCCCAGGCTGACATTTCCGCTACCTCGGAATGCCACGAAGGCGATGTGATCGAACCGCCGCCCATCAaccacacgggccttg                                                                                                                                                                               >  2:1178622/1‑276 (MQ=255)
                                                                                                gTACCCAGGAAGAGTGGATGCGGCATCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGa                                                                                                                                                                              <  1:1599076/289‑1 (MQ=255)
                                                                                                 tACCCAGGAAGAGTGGATGCGGCATCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGCTGTGATCGATCCACTGCCGATCTACACCCCGGGCTTTgca                                                                                                                                                                             >  2:2117713/1‑287 (MQ=255)
                                                                                                 tACCCAGGAAGAGTGGATGCGGCATCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGaa                                                                                                                                                                             >  1:1165108/1‑289 (MQ=255)
                                                                                                 tACCCAGGAAGAGTGGATGCGGCATCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGAACCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATGGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCttgtaa                                                                                                                                                                             >  1:1027854/1‑285 (MQ=255)
                                                                                                  aCCCAGGAAGAGTGGATGCGGCATCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGACGATCTACACGCCGGGCTTTgcac                                                                                                                                                                            >  2:1217210/1‑286 (MQ=255)
                                                                                                  aCCCAGGAAGAGTGGATGCGGCATCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACCGCCGATCTACACGCCGGGCTTTGaaa                                                                                                                                                                            >  2:812313/1‑289 (MQ=255)
                                                                                                   gccAGGAAGGGTGGATGCGGCATCTGTATGCCCAGTCGCAGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGTGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTTCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAg                                                                                                                                                                           <  2:146942/288‑1 (MQ=255)
                                                                                                   cccAGGAGGAGTGGATGCAGCATCTGTAGGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGCTCCACTGCCGATCTACACGCCGGGCTTTGAAAg                                                                                                                                                                           <  2:555490/289‑1 (MQ=255)
                                                                                                         aaGAGTGGATACGGCATCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGTTCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATc                                                                                                                                                                      <  1:598637/288‑1 (MQ=255)
                                                                                                            agTGGATGCGGCATCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTTCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAACCCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCGGACATTGCCGCTACCTGGGAATTGCATGAAGGCGATGTGATTGAACCACTGCCGATCTACACGCCGGGCTTTGAAAGTTAACAGGa                                                                                                                                                                  >  2:2191134/1‑289 (MQ=255)
                                                                                                                  tGCGGCATCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCCGGGAATTTCCTTAATGCGATGTGAACGATGCACTGCCGATCTAACCGCCGGGGCTTTAAATGTATCacgcaccctt                                                                                                                                                            >  2:1402819/1‑280 (MQ=255)
                                                                                                                     ggactcgtgaTGCCCAGTGGCGGGAAGCGATTCCTGAACTGCAAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACACACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCGTACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGa                                                                                                                                                          <  2:1386527/279‑1 (MQ=255)
                                                                                                                        aTCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGaaca                                                                                                                                                       <  1:103891/288‑1 (MQ=255)
                                                                                                                         tCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGaacaaa                                                                                                                                                     <  2:393567/289‑1 (MQ=255)
                                                                                                                               tGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTa                                                                                                                                                >  1:1693869/1‑288 (MQ=255)
                                                                                                                               tGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTa                                                                                                                                                >  1:1302506/1‑288 (MQ=255)
                                                                                                                               tGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTa                                                                                                                                                >  1:624368/1‑288 (MQ=255)
                                                                                                                                    agtcgcGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCCATCCACACGCCGGGGTTTGAAAGTTAACAGGAGCCGCGTAACAAACAGGAACCGc                                                                                                                                           >  2:2077867/6‑288 (MQ=255)
                                                                                                                                     gtcgcGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTgat                                                                                                                                                                                                               >  2:1789356/5‑219 (MQ=255)
                                                                                                                                     gtcgcGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGCTCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCt                                                                                                                                          >  2:694036/5‑288 (MQ=255)
                                                                                                                                     gtcgcGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGaacaa                                                                                                                                                      <  1:2106676/272‑1 (MQ=255)
                                                                                                                                     gtcgcGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATccctgt                                                                                                                                         >  1:666108/5‑285 (MQ=255)
                                                                                                                                     gtcgcGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCt                                                                                                                                          >  1:406630/5‑288 (MQ=255)
                                                                                                                                       cgcGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCt                                                                                                                                          <  1:2119197/284‑1 (MQ=255)
                                                                                                                                       cgcGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTg                                                                                                                                         <  1:434500/285‑1 (MQ=255)
                                                                                                                                                   ttCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGttt                                                                                                                           <  1:747977/289‑1 (MQ=255)
                                                                                                                                                      cTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGaa                                                                                                                                                                             >  2:833981/1‑236 (MQ=255)
                                                                                                                                                        gAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGa                                                                                                                                                          >  2:1512582/1‑253 (MQ=255)
                                                                                                                                                              ccAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATaaa                                                                                                                 >  1:810311/1‑288 (MQ=255)
                                                                                                                                                                        aaGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTg                                                                                                                                         >  2:1292285/1‑254 (MQ=255)
                                                                                                                                                                                    aGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACgg                                                                                          <  1:1782147/289‑1 (MQ=255)
                                                                                                                                                                                    aGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACgg                                                                                          <  2:1693869/289‑1 (MQ=255)
                                                                                                                                                                                             tCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACGGCAACGTTg                                                                                  <  1:861223/288‑1 (MQ=255)
                                                                                                                                                                                               tttAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACGGCAACGTTGAtg                                                                               >  1:1631071/1‑289 (MQ=255)
                                                                                                                                                                                               tttAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACGGCAACGTTGAtg                                                                               >  1:131924/1‑289 (MQ=255)
                                                                                                                                                                                                ttAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACGGCAACGTTGAtgt                                                                              >  1:1574467/1‑289 (MQ=255)
                                                                                                                                                                                                   aaaaGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTcact                                                                                                    >  1:639923/1‑263 (MQ=255)
                                                                                                                                                                                                   aaaaGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTcact                                                                                                    <  2:639923/264‑2 (MQ=255)
                                                                                                                                                                                                        cgcgACCCACAAGGGCATCACGTTACTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACTCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACGGCAACGTTGATGTGTGGaaa                                                                       >  1:1965407/1‑288 (MQ=255)
                                                                                                                                                                                                         gcgACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACGGCAACGTTGATGTGCTGAAAGc                                                                     >  1:1810857/1‑289 (MQ=255)
                                                                                                                                                                                                                       cATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTgat                                                                                                                                                                                                               <  1:214609/137‑1 (MQ=255)
                                                                                                                                                                                                                       cATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGaacaaa                                                                                                                                                     >  1:250901/1‑195 (MQ=255)
                                                                                                                                                                                                                       cATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTg                                                                                                                                         <  2:1412992/207‑1 (MQ=255)
                                                                                                                                                                                                                       cATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTg                                                                                                                                         >  1:1412992/1‑207 (MQ=255)
                                                                                                                                                                                                                       cATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACGGCAACGTTGATGTGCTGAAAGCGGCTTGCCGTCAgg                                                       >  1:1074586/1‑289 (MQ=255)
                                                                                                                                                                                                                       cATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCCTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACg                                                                                           >  1:1926340/1‑253 (MQ=255)
                                                                                                                                                                                                                         tCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTcact                                                                                                    >  2:587916/1‑241 (MQ=255)
                                                                                                                                                                                                                         tCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACGGCAACGTTGATGTGCTGAAAGCGGCTTGCCGTCAg                                                        >  1:879117/1‑286 (MQ=255)
                                                                                                                                                                                                                         tCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACGGCAACGTTGATGTGCTGAAAGCGGCTTGCCGTCAGGaa                                                     >  2:766870/1‑289 (MQ=255)
                                                                                                                                                                                                                         tCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑AAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACGGCAACGTTGATGTGCTGAAAGCGGCTTGCCGTCAg                                                        <  2:879117/286‑1 (MQ=255)
                                                                                                                                                                                                                           aCGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGTG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACGGCAACGTTGATGTGCTGAAAGCGGCTTGCTGTCAGGAAAt                                                   <  1:1543440/289‑1 (MQ=255)
                                                                                                                                                                                                                                gCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCg                                                                                                                                                                                      <  2:2063371/153‑1 (MQ=255)
                                                                                                                                                                                                                                gCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCg                                                                                                                                                                                      >  1:2063371/1‑153 (MQ=255)
                                                                                                                                                                                                                                    ataAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACGGCAAAGTTGAAGTGCTGAAAGCGGCTTGCCGTCAGGAAATGGTGATCaa                                          >  2:1000395/1‑289 (MQ=255)
                                                                                                                                                                                                                                      aaaGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGaacaa                                                                                                                                                      <  2:807421/179‑1 (MQ=255)
                                                                                                                                                                                                                                       aaGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACGGCAACGTTGATGTGCTGAAAGCGGCTTGCCGTCAGGAAATGTGGATCAAccc                                       <  1:834297/289‑1 (MQ=255)
                                                                                                                                                                                                                                           cTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACGGCAACGTTGATGTGCTGAAAGCGGCTTGCCGTCAgg                                                       <  2:199266/269‑1 (MQ=255)
                                                                                                                                                                                                                                           cTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACGGCAACGTTGATGTGCTGAAAGCGGCTTGCCGTCAgg                                                       >  1:199266/1‑269 (MQ=255)
                                                                                                                                                                                                                                           cTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACGGCAACGTTGATGTGCTGAAAGCGGCTTGCCGTCAGGAAATGTGGATCAACCCGCtt                                   >  1:1315673/1‑289 (MQ=255)
                                                                                                                                                                                                                                             tCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACGGCAACGTTGATGTGCTGAAAGCGGCTTGCCGTCAGGAAATGTGGATCAACCCGCt                                    >  2:1319071/1‑286 (MQ=255)
                                                                                                                                                                                                                                                        ccGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACGGCAACGTTGATGTGCTGAAAGCGGCTTGCCGTCAGGAAATGTGGATCAACCCGCTTGATGCCCAAAAAc                      >  1:1238279/1‑289 (MQ=255)
                                                                                                                                                                                                                                                         cGCAGGCAAACCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACGGCAACGTTGATGTGCTGAAAGCGGCTTGCCGTCAGGAAATGTGGATCAACCCGCTTGATGCCCAAAAAcg                     <  1:1217210/289‑1 (MQ=255)
                                                                                                                                                                                                                                                         cGCAGGCAAACCCACTGACTACGCCATCGGG‑AAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACGGCAACGTTGATGTGCTGAAAGCGGCTTGCCGTCAGGAAATGTGGATCAACCCGCTTGATGCCCAAAAAcg                     <  1:2077608/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                  aCCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACGGCAACGTTGATGTGCTGAAAGCGGCTTGCCGt                                                           <  2:2033202/242‑1 (MQ=255)
                                                                                                                                                                                                                                                                  aCCCACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACGGCAACGTTGATGTGCTGAAAGCGGCTTGCCGt                                                           >  1:2033202/1‑242 (MQ=255)
                                                                                                                                                                                                                                                                     cACTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACGGCAACGTTGATGTGCTGAAAGCGGCTTGCCGTCAGGAAATGTGGATCAACCCGCTTGATGCCCAAAAACGCGGTATCCACaa         <  1:733288/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                      aCTGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACGGCAACGTTGATGTGCTGAAAGCGGCTTGCCGTCAGGAAATGTGGATCAACCCGCTTGATGCCCAAAAACGCGGTATCCACAAc        >  1:822361/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                       cTGACTACGCC‑AGCGGACAAAATGGAGATTTATTCGCCGGCGCGGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGCTCCACTGCAGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACGGCAACGTTGATGTGCTGAAAGCGGCTTGCCGTCAGGAAATGTGGATCAACCCGCTTGATGCCCAAAAACGCGGTATCCACAACg       <  2:740242/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                        tGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATTCCGCGTTCAATCAACTTACGGCAACGTTGATGTGCTGAAAGCGGCCTGCCGTCAGGAAATGGGGATCAACCCGCTTGATGCCCCAAAACTCGGttacccacacgg      >  2:932919/1‑278 (MQ=255)
                                                                                                                                                                                                                                                                        tGACTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACGGCAACGTTGATGTGCTGAAAGCGGCTTGCCGTCAGGAAATGTGGATCAACCCGCTTGATGCCCAAAAACGCGGTATCCACAACg       >  2:202120/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                          aCTACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACGGCAACGTTGATGTGCTGAAAGCGGCTTGCCGTCAGGAAATGTGGATCAACCCGCTTGATGCCCAAAAAcgcg                   <  2:1510908/274‑1 (MQ=255)
                                                                                                                                                                                                                                                                            tACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACGGCAACGTTGATGTGCTGAAAGCGGCTTGCCGTCAGGAAATGTGGATCAACCCGCTTGATGCCCAAAAACGCGGTATCCACAACGGCGAt  <  2:1238279/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                            tACGCCATCGGG‑CAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACGGCAACGTTGATGTGCTGAAAGCGGCTTGCCGTCAGGAAATGTGGATCAACCCGCTTGATGCCCAAAAACGCGGTATCCACAACGGCGAt  <  1:139772/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                   |||                                                                                                                                                                                                                                                                                        
AGGTGATTAAACCGCGCTTTGAATGTAAGACCATCTATGAAATGACCAGCGAACTGGCAAAACGTCTTGGCGTTGAGCAACAGTTTACTGAAGGCCGTACCCAGGAAGAGTGGATGCGGCATCTGTATGCCCAGAGCCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCAAGCGG‑CAAAATTGAGATTTATAGCCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACAGTACTTACGGCAACGTTGATGTGCTGAAAGCGGCTTGCCGTCAGGAAATGTGGATCAACCCGCTTGATGCCCAAAAACGCGGTATCCACAACGGCGAT  >  CP042583/805516‑806072

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A