Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A0 F0 I1 R1
|
4926 |
296.4 |
4517418 |
96.8% |
4372860 |
264.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
807,170 |
3 bp→TCA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 807,170 | 0 | A | T | 99.4%
| 806.0
/ NA
| 337 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (173/162); minor base C (0/2); total (173/164) |
| Fisher's exact test for biased strand distribution p-value = 2.36e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 807,171 | 0 | G | C | 100.0%
| 800.1
/ NA
| 337 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (173/164); total (173/164) |
| * | CP042583 | 807,172 | 0 | T | A | 99.7%
| 811.3
/ NA
| 337 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (172/164); minor base C (1/0); total (173/164) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 337 total aligned reads displayed.
CTGGCTATCTGGCAAACCCGAAGGAGGTGTGAGATGGGAAGTGGATGGCATGAATGGCCGCTGATGATCTTCACGGTCTTCGGGCAATGTGTAGCAGGTGGTTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTAGTCCAATGCGCGCTTTTAAC‑AGCCTCAACC‑GGGTAGGGGCTAGTGCACTCAGTAACGAAATCGCCAGCG‑GTAGCATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGAGTCCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACAGCATTGATACCGTTCCGACCTGGTACAGCATCTGGACGCCGATGGGCTTCTTCCTGACGATGTTTATGGGCGGCCCGTTACTGGGTTACCTGTTGTTGAGTCTGGCTGG > CP042583/806894‑807450
|||
tGGCTATCTGGCAAACCCGAAGGAGGTGTGAGATGGGAAGTGGATGGCATGAATGGCCGCTGATGATCTTCACGGTCTTCGGGCAATGTGTAGCAGGTGGTTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTa > 1:1709339/1‑288 (MQ=255)
ggCTATCTGGCAAACCCGAAGGAGGTGTGAGATGGGAAGTGGATGGCATGAATGGCCGCTGATGATCTTCACGGTCTTCGGGCAATGTGTAGCAGGTGGTTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTaa > 2:863126/1‑288 (MQ=255)
tCTGGCAAACCCGAAGGAGGTGTGAGATGGGAAGTGGATGGCATGAATGGCCGCTGATGATCTTCACGGTCTTCGGGCAATGTGTAGCAGGTGGTTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGaaa > 1:2132230/1‑288 (MQ=255)
gAAGGAGGTGTGAGATGGGAAGTGGATGGCATGAATGGCCGCTGATGATCTTCACGGTCTTCGGGCAATGTGTAGCAGGTGGTTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCACTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑Gttc > 1:1555300/1‑287 (MQ=255)
agaTGGGAAGTGGATGGCATGAATGGCCGCTGATGATCTTCACGGTCTTCGGGCAATGTGTAGCAGGTGGTTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTg > 1:1648931/1‑288 (MQ=255)
ggAAGTGGATGGCATGAATGGCCGCTGATGATCTTCACGGTCTTCGGGCAATGTGTAGCAGGTGGTTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAg > 1:320410/1‑289 (MQ=255)
gAAGTGGATGGCATGAATGGCCGCTGATGATCTTCACGGTCTTCGGGCAATGTGTAGCAGGTGGTTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATTGGCATTGGCTTTATCGCCCCTGTGCTCCCTCTTGGTTCACCAATGCGCGCTTTTACCTTGCCTC‑ACC‑GGTATGGGGCTTCAAGCCTAAGGAACGAAATCGCCAGAG‑GTTCAATCTGTTTTGCAGtcg > 2:1724055/1‑286 (MQ=255)
gAAGTGGATGGCATGAATGGCCGCTGATGATCTTCACGGTCTTCGGGCAATGTGTAGCAGGTGGTTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAgg > 1:35435/1‑289 (MQ=255)
gAAGTGGATGGCATGAATGGCCGCTGATGATCTTCACGGTCTTCGGGCAATGTGTAGCAGGTGGTTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAg > 2:1956930/1‑288 (MQ=255)
aGTGGATGGCATGAATGGCCGCTGATGATCTTCACGGTCTTCGGGCAATGTGTAGCAGGTGGTTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCTGCCTTTTTTGCCGTAggcc > 2:2054914/1‑288 (MQ=255)
gATGGCATGAATGGCCGCTGATGATCTTCACGGTCTTCGGGCAATGTGTAGCAGGTGGTTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCa < 2:336044/288‑1 (MQ=255)
aTGGCATGAATGGCCGCTGATGATCTTCACGGTCTTCGGGCAATGTGTAGCAGGTGGTTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCAt < 1:1934093/288‑1 (MQ=255)
ccGCTGATGATCTTCACGGTCTTCGGGCAATGTGTAGCAGGTGGTTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTa > 2:381998/1‑232 (MQ=255)
ccGCTGATGATCTTCACGGTCTTCGGGCAATGTGTAGCAGGTGGTTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTa < 1:381998/232‑1 (MQ=255)
cGCTGATGATCTTCACGGTCTTCGGGCAATGTGTAGCAGGTGGTTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGc > 1:606811/1‑289 (MQ=255)
cGCTGATGATCTTCACGGTCTTCGGGCAATGTGTAGCAGGTGGTTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGc > 2:549992/1‑289 (MQ=255)
cGCTGATGATCTTCACGGTCTTCGGGCAATGTGTAGCAGGTGGTTTTATCGTTCTGGCTTTGGCGCGGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGCGCATTGGCTTTCTCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTCTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTACCGACATCGCCAGCG‑TTTCGATCTTTTTTGCCGTAGTCGGCCTCGTCTGGTTCCTGGc > 2:81808/1‑289 (MQ=255)
tgttgagtttCACGGTCTTCGGGCAATGTGTAGCAGGTGGTTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAAt < 2:1941594/281‑1 (MQ=255)
cACGGTCTTCGGGCAATGTGTAGCAGGTGGTTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCCGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGaaaaa > 2:1453470/1‑288 (MQ=255)
tCGGGCAATGTGTAGCAGGTGGTTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTgtcacc > 1:1983484/1‑284 (MQ=255)
cGGGCAAGGTTTTGCGGGTGGTTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTgtcaccg < 2:2127218/289‑7 (MQ=255)
cattgggtAGCGGGTGGTTTTATCGTTCTGGCTTTGGCGCTGCCCAAAGGCGACCTGCGAGCGGAAGCCCGGGGGCGGTTTTTGGCCTGCATGTTTGGTTTG‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTCGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCa < 2:1851030/282‑1 (MQ=255)
aTGTGTAGCAGGTGGTTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTgtcaccgg > 1:562023/1‑277 (MQ=255)
aTGTGTAGCAGGTGGTTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTg > 2:259613/1‑289 (MQ=255)
aTGTGTAGCAGGTGGTTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTg > 1:483568/1‑289 (MQ=255)
aTGTGTAGCAGGTGGTTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTGCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAAGGCTGAAAAAGCTgtcaccggctatg > 2:1375632/1‑277 (MQ=255)
gtggtTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCt > 1:990257/1‑240 (MQ=255)
gtggtTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCCCCGGCATTGCGTACGCtgtg > 2:717121/1‑289 (MQ=255)
gtggtTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACg > 1:552811/1‑284 (MQ=255)
gtggtTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCttgg > 2:1700085/1‑286 (MQ=255)
gtggtTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCtgtg > 1:1485203/1‑289 (MQ=255)
gtggtTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCtgtg > 1:1403014/1‑289 (MQ=255)
gtggtTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGCAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCtgtg > 2:241458/1‑289 (MQ=255)
ggtTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTgtcaccggc > 1:286797/1‑264 (MQ=255)
ggtTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTTAGGTGTGGc > 2:1092381/1‑289 (MQ=255)
ggtTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTgg < 1:1140062/288‑1 (MQ=255)
ggtTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGc > 2:1003646/1‑289 (MQ=255)
ggtTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGc > 2:1157689/1‑289 (MQ=255)
cTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATC‑TTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGAt > 1:75710/1‑289 (MQ=255)
gCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATgg > 1:7077/1‑289 (MQ=255)
tgctCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCg < 2:149670/288‑1 (MQ=255)
tgctCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCg > 2:97776/1‑288 (MQ=255)
aaGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCtt > 1:678195/1‑289 (MQ=255)
aCCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCAt < 1:944564/196‑1 (MQ=255)
cAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATgg < 2:682642/288‑1 (MQ=255)
aGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGc < 1:1851155/287‑1 (MQ=255)
cccAGCAGGGTTTTCTTGCCTGCATGTTTGGTTTA‑TGGGGGCTGATGGGCATTGGCTTTATAGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCgt < 2:586174/287‑1 (MQ=255)
ccAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCgtgtg < 1:1700085/289‑1 (MQ=255)
agcGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGtata < 2:308304/288‑1 (MQ=255)
gttttATTGCCTGCTTGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATaa < 2:1403014/283‑1 (MQ=255)
gtgtTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAAc < 1:885994/287‑1 (MQ=255)
gtgtTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAAc < 1:2087998/287‑1 (MQ=255)
tgtTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTgtcaccg < 1:1789802/208‑7 (MQ=255)
tgtTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACAGc > 1:811939/1‑289 (MQ=255)
gCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACAGCATTGATa < 1:1453470/289‑1 (MQ=255)
gCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACAGCATTGATa < 1:241458/289‑1 (MQ=255)
ccTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCgtgtg > 2:928786/1‑272 (MQ=255)
tGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACAGCATTGATACCg > 2:695200/1‑289 (MQ=255)
aTGTTTGGTTTA‑TGTGTGCTGTTGTGCATTGGCGTTTTCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACAGCATTGATACCGTTc < 2:1709339/289‑1 (MQ=255)
gTTTGGTTTATTGGGTG‑TAATGGGCCTTGGCTTTATCGCCTCGATGCTCCTTCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGTGCTTCAGCACTCAGTAACGAAATCTCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACAGCATTGATACCGTTCCg < 2:1772774/289‑1 (MQ=255)
attgttGCTGATCGGCATTGGCGTTATGCCCTCTATGCTCCATGTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCCACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACAGCATTGATACCGTTCCGACCTGGTAc < 1:1043329/284‑1 (MQ=255)
gCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACAGCATTGATACCGTTTCGACCTgtgacggta > 2:176217/1‑279 (MQ=255)
tGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACAGCATTGATACCGTTCCGACCTGGTACAGCATCTGGa < 2:1587454/288‑1 (MQ=255)
gggCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACAGCATTGATACCGTTCCGACCTGGTACAGCATCTGGAc > 1:920163/1‑288 (MQ=255)
cATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCt < 2:1240889/183‑1 (MQ=255)
cATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACAGCATTGATACCGTTCCGACCTGGTACAGCATCTgg > 1:2051347/1‑283 (MQ=255)
aTTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACAGCATTGATACCGTTCCGACCTGGTACAGCATCTGGACGCCGa > 1:508689/1‑289 (MQ=255)
tGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGc > 2:2177355/1‑233 (MQ=255)
gCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACAGCATTGATACCGTTCCGACCTGGTACAGCATCTGGACGCCGATggg > 1:1319845/1‑289 (MQ=255)
gCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCAGTGGCGGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTTCGTGTGTATACCAGCATTGATACCTTCTCGCCCTGGTACAGCATCTGGACGCCGATgg > 2:1804229/1‑288 (MQ=255)
ctctATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCg > 2:2248116/1‑197 (MQ=255)
ctctATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACAGCATTGATACCGTTCCGACCTGGTACAGCATCTGGACGCCGATGGGCTTCTTCCTg > 2:403711/1‑289 (MQ=255)
aTGCTCCATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACAGCATTGATACCGTTCCGACCTGGTACAGCATCTGGACGCCGATGGGCTTCTTCCTGACGa < 2:320410/289‑1 (MQ=255)
cATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGgatga < 1:1161193/205‑1 (MQ=255)
cATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGc > 1:68732/1‑211 (MQ=255)
cATCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACAGCATTGATACCGTTCCGACCTGGTa > 2:768926/1‑248 (MQ=255)
tCTTGGTTCACCAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGc < 1:13756/209‑1 (MQ=255)
ttggttcaccAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACAGCATTGATACCGTTCCGACCTGGTACAGCATCTGGACGCCGATGGGCTTCTTCCTGACGATGTTTATggg < 1:1016395/281‑1 (MQ=255)
tggttcaccAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACAGCATTGATACCGTTCCGACCTGGTa < 1:1763911/236‑1 (MQ=255)
gttcaccAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACCGCATTGATACCTTTCCGACTGGGTACAGCATCTGGACTCCGATGGGCTTGTTCCTGACGATGGTTATGggcgt > 2:564354/6‑288 (MQ=255)
ttcaccAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACAGCATTGATACCGTTCCGACCTGGTACAGCATCTGGACGCCGATGGGCTTCTTCCTGACGATGTTTATGggcggc < 2:35435/285‑1 (MQ=255)
ttcaccAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACAGCATTGATACCGTTCCGACCTGGTACAGCATCTGGACGCCGATGGGCTTCTTCCTGACGATGTTTATGggcgg > 1:850611/5‑288 (MQ=255)
tcaccAATGGGAGCTTTTCAC‑TCGCACAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCGTGTCG‑ATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACAGCATTGATACCGTTCCGACCTGGTACAGCATCTGGACGCCGATGGGCTTCTTCCTGACGATGTTTATGggcggc < 2:1374347/285‑1 (MQ=255)
tcaccAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCGTCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACAGCATTGATACCGTTCCGACCTGGTACAGCATCTGGACGCCGATGGGCTTCTTCCTGACGATGTTTATGGGCGGcc < 1:2024785/286‑1 (MQ=255)
ccAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCg < 1:1598751/175‑1 (MQ=255)
cAATGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTACGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACAGCATTGATACCGTTCCGa > 1:1728173/1‑228 (MQ=255)
cAATGCGCGCTTTTAAC‑TCGCTACACC‑GTGTAGGGGCTTCAGCACTCAGTACCGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGTCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACAGCATTGATACCGTTCCGACCTGGTACAGCATCTGGACGCCGATGGGCTTCTTCCTGACGATGTTTATGGGCGGCCCGtt < 2:2018112/289‑1 (MQ=255)
aTGCGCGCTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACAGCATTGATACCGTTCCGACCTGGTACAGCATCTGGACGCCGATGGGCTTCTTCCTGACGATGTTTATGGGCGGCCCGTTAc < 1:221761/289‑1 (MQ=255)
cgcgcTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGc < 2:1115480/193‑1 (MQ=255)
cgcgcTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATCACAGCATTGATACCGTTCCGACCTGGTACAGCATCTGGACGCCGATGGGCTTCTTCCTGACGATGTTTATGggcggc > 2:491712/1‑279 (MQ=255)
cgcgcTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACAGCATTGATACCGTTCCGACCTGGTACAGCATCTGGACGCCGATGGGCTTCTTCCTGACGATGTTTATGGGCGGCCCGTTACTgg > 1:397858/1‑289 (MQ=255)
cgcgcTTTTAAC‑TCGCTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACAGCATTGATACCGTTCCGACCTGGTACAGCATCTGGACGCCGATGGGCTTCTTCCTGACGATGTTTATGGGCGGCCCGTTACTgg > 1:1950401/1‑289 (MQ=255)
tttaactcgcTCAACCGGGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACAGCATTGATACCGTTCCGACCTGGTACAGCATCTGGACGCCGATGGGCTTCTTCCTGACGATGTTTATGGGCGGCCCGTTACTGGGTTAc < 2:1633758/280‑1 (MQ=255)
cTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGc > 1:1817156/1‑178 (MQ=255)
cTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAAc > 2:1917100/1‑189 (MQ=255)
cTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAAc < 1:1917100/189‑1 (MQ=255)
cTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACAGCATTGATACCGTTCCGACCTGGTACAGCATCTGGACGCCGATGGGCTTCTTCCTGACGATGTTTATGGGCGGCCCGTTa < 1:1003566/270‑1 (MQ=255)
cTCAACC‑GGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTCGCTGATAGTGACGACGGTTCTTGTCGCCACCTTTGTCTTGATGATTGTACTTGTGGATATCAGTATTGATACCGCTCCGACCTGGTTCAGCACCTGAACGCCGCTGTGCTTCTACCTGTCTCGGTATATGTGCGGCTCGTTGCTGGGTTACGTgttgttca > 2:1532988/1‑287 (MQ=255)
tAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCttt < 1:1113133/152‑1 (MQ=255)
tAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCG‑GTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCgtgtg > 2:1024497/1‑173 (MQ=255)
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CTGGCTATCTGGCAAACCCGAAGGAGGTGTGAGATGGGAAGTGGATGGCATGAATGGCCGCTGATGATCTTCACGGTCTTCGGGCAATGTGTAGCAGGTGGTTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTA‑TGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTAGTCCAATGCGCGCTTTTAAC‑AGCCTCAACC‑GGGTAGGGGCTAGTGCACTCAGTAACGAAATCGCCAGCG‑GTAGCATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGAGTCCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACAGCATTGATACCGTTCCGACCTGGTACAGCATCTGGACGCCGATGGGCTTCTTCCTGACGATGTTTATGGGCGGCCCGTTACTGGGTTACCTGTTGTTGAGTCTGGCTGG > CP042583/806894‑807450
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
