Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A0 F0 I1 R1
|
4926 |
296.4 |
4517418 |
96.8% |
4372860 |
264.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,463,030 |
3 bp→TCA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,463,030 | 0 | A | T | 99.7%
| 711.4
/ NA
| 302 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (147/153); minor base C (1/0); total (149/153) |
| Fisher's exact test for biased strand distribution p-value = 4.92e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,463,031 | 0 | G | C | 99.7%
| 703.4
/ NA
| 302 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (148/153); minor base A (1/0); total (149/153) |
| Fisher's exact test for biased strand distribution p-value = 4.93e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
| * | CP042583 | 1,463,032 | 0 | T | A | 99.0%
| 714.9
/ NA
| 302 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (146/153); minor base C (3/0); total (149/153) |
| Fisher's exact test for biased strand distribution p-value = 1.19e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 302 total aligned reads displayed.
AAGATCAACAGCCCGCTGGCGATCATTACCCTTGCACCCGGTGTTCAGGAACCGTGCACCAGTGATACCTCTCATCAGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTAGTCGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCG‑ACTACGGTCTGGTGGGCGATATCTACAAAGTCGTCCCTGCCCTGATTAGCCAGTTGAGCCGCTAATTCCCCTTTCAACCACATCTC > CP042583/1462757‑1463311
|||
gtcccGCTGGCGATCATTAGCCTTGCACCCGGGGTTCAGGAACCGTGCAACAGTGATACCTCTCATCAGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCAGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCgaga < 2:266643/287‑1 (MQ=255)
cGCTGGCGATCATTACCCTTGCACCCGGTGTTCAGGAACCGTGCACCAGTGATACCTCTCATCAGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGGGGCGGTTCTGCATGCTGAAGTCGGTCGGTCACGTCCACTTGACGAAGGCGATAAcgg > 2:871167/1‑287 (MQ=255)
cTGGCGATCATTACCCTTGCACCCGGTGTTCAGGAACCGTGCACCAGTGATACCTCTCATCAGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACt‑gga > 1:1319378/1‑289 (MQ=255)
tGGCGATCATTACCCTTGCACCCGGTGTTCAGGAACCGTGCACCAGTGATACCTCTCATCAGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACt‑gga < 1:101749/288‑1 (MQ=255)
tGGCGATCATTACCCTTGCACCCGGTGTTCAGGAACCGTGCACCAGTGATACCTCTCATCAGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACt‑gga < 2:803227/288‑1 (MQ=255)
cATTACCCTTGCACCCGGTGTTCAGGAACCGTGAACCAGTGATACCTCTCATCAGTGCCCGACAGAACCGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGt < 2:298871/289‑1 (MQ=255)
tACCCTTGCACCCGGTGTTCAGGAACCGGGAACCAGTGATACCTCTCATCAGTGCCCGACAGAAACGGTACCTTATGTGGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCAAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGaa < 2:246963/289‑1 (MQ=255)
tGCACCCGGTGTTCAGGAACCGTGCACCAGTGATACCTCTCATCAGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGCACTGGCGGCGGTGCGGAATGCTGAAGTCGGCTGTTCACGGCCAATTGCCGAAGGCGAGAACTGGGAGGAAGCGTGacgtcat > 2:81067/1‑283 (MQ=255)
tGCACCCGGTGTTCAGGAACCGTGCACCAGTGATACCTCTCATCAGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGaa < 2:642981/283‑1 (MQ=255)
tGCACCCGGTGTTCAGGAACCGTGCACCAGTGATACCTCTCATCAGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGaa > 1:642981/1‑283 (MQ=255)
tGCACCCGGTGTTCAGGAACCGTGCACCAGTGATACCTCTCATCAGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGGGAACGTtat > 1:1794102/1‑289 (MQ=255)
tGCACCCGGTGTTCAGGAACCGTGCACCAGTGATACCTCTCATCAGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGGGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTtat > 1:111379/1‑289 (MQ=255)
gCACCCGGTGTTCAGGAACCGTGCACCAGTGATACCTCTCATCAGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGc > 2:2221294/1‑261 (MQ=255)
gCACCCGGTGTTCAGGAACCGTGCACCAGTGATACCTCTCATCAGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTtata > 1:2131594/1‑289 (MQ=255)
gCACCCGGTGTTCAGGAACCGTGCACCAGTGATACCTCTCATCAGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTtata > 1:1096360/1‑289 (MQ=255)
gCACCCGGTGTTCAGGAACCGTGCACCAGTGATACCTCTCATCAGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTtata > 1:663715/1‑289 (MQ=255)
gCACCCGGTGTTCAGGAACCGTGCACCAGTGATACCTCTCATCAGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGGCCAATTGCCGAATGCCAGAACT‑GGAAGGTGCGTGAACGGtata > 2:1798965/1‑289 (MQ=255)
gCACCCGGTGTTCAGGAACCGTGCACCAGTGATACCTCTCATCAGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGACGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAAGGCTGAAGGCGGCTGCTCCCGTCCACTTGCCGAAGGCGAGCACT‑GGATGGAGCGTGacagtgata > 2:2054178/1‑281 (MQ=255)
ggTGTTCAGGAACCGTGCACCAGTGATACCTCTCATCAGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTCAACGTCCAATTGCCGAAGGGGAGAACT‑GGAAGGAGGGTGAACGGTCTAT‑CGgtg > 2:933504/1‑289 (MQ=255)
ccGTGCACCAGTGATACCTCTCATCAGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCgtgt > 1:34077/1‑289 (MQ=255)
gTGCACCAGTGATACCTCTCATCAGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGc < 2:1351369/241‑1 (MQ=255)
gTGCACCAGTGATACCTCTCATCAGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGaa < 2:623302/246‑1 (MQ=255)
gTGATACCTCTCATCAGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGGGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAAt > 1:428473/1‑288 (MQ=255)
tGATACCTCTCATCAGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGGGAGAACT‑GGATGGAGCGTGAACGGTATAT‑CGGTGTACCCGGCgttgtgtcgaaagt > 2:583437/1‑276 (MQ=255)
aTACCTCTCATCAGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCg < 1:525226/288‑1 (MQ=255)
aTACCTCTCATCAGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCGGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGGGCGGGAACGTTATTA‑CGGGGTCTCCGGCGTGTTGGTGAAATCCGa > 2:2186621/1‑289 (MQ=255)
tACCTCTCATCAGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGAt < 1:1146889/289‑1 (MQ=255)
tctcATCAGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATc‑tct > 1:2231236/1‑289 (MQ=255)
catcgttGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTAcc < 1:2195941/283‑1 (MQ=255)
catcaGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTa > 1:2060815/1‑287 (MQ=255)
atcaGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCgtg < 2:466170/266‑1 (MQ=255)
tGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTTTCTCCGGCGGGTTGCTGAAATCCGATC‑TCTTCCTGACg > 2:1051134/1‑288 (MQ=255)
cccGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑Cgg < 2:1237179/246‑1 (MQ=255)
cGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTggg < 2:1540827/289‑1 (MQ=255)
aaaCGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCg < 1:690627/201‑1 (MQ=255)
aaCGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGAtctc < 1:1111013/288‑1 (MQ=255)
ggTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGAGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCggg < 1:1918106/289‑1 (MQ=255)
tACCTTATGTTGCTCCGGGTAATGAAATGGTCTGTCGCGAACGCCGTGAGAAAGCCGAAAGCAGCGGGGACCGTAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGc < 2:723013/288‑1 (MQ=255)
aCCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACg > 1:871058/1‑271 (MQ=255)
ttATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATc < 2:1995255/289‑1 (MQ=255)
ttATGTTGCTCCGCGACATGACATTCTCTGTCACGAACGCCGTGCGAAAGCCGCAAGCGGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATc < 2:1268335/289‑1 (MQ=255)
aTGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCa > 1:1644401/1‑289 (MQ=255)
cTCCGCGTGATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCCGCGTGGACCTGAGCAAAGCAAAAAGTGTGGTTGGCTTCGGTCGTGGACTGGCGGCGCAGGATGACCGAAAAATGGTCGACGAACTGGCGGGGGTGTTGAATGCTGACGTCGGCTGTTCACGTCCAATTGCCGAAGGCGGGCACA‑GGATTGAGCGTGACCGTTATAG‑AGGTGTCTACGGGGGGTTGCTGACATCCGATC‑CCTACTTGACGCATGGGACCTCCgggaacatgtacgctac > 2:5520/1‑275 (MQ=255)
cTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGc > 1:120168/1‑188 (MQ=255)
cTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGAtc‑t < 1:2239572/250‑1 (MQ=255)
cTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTggg > 1:274149/1‑265 (MQ=255)
cTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCatat > 2:384490/1‑289 (MQ=255)
cTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGGTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATACGATC‑TCTACCTTACGCTTGGGATCTCCGGGCAGATCCAGCatat > 2:700192/1‑289 (MQ=255)
tCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGACGCAAGCAGCGTGGACCTGAGCACAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGATGAAGTCGGCTGTTCACGTCCAATTGCTGAAGGCGAGAACG‑GGATGGAGCGTGTACGTTATAT‑CGGTGTCTCCGGAGTGTTGCTGAAACCCGACC‑TCGACATGACGCTGGGGCTCTCCGGGCAGagtccgaacaag > 2:1391986/1‑278 (MQ=255)
cgcgTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACCGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCCAAGGCGAGCACT‑GGATGGAGCGGGAATGTTTTATGCGGT‑TCTCAGGCGTGTTGGTGAGTCTCGATCTTCTA‑CTGACGTCGGGGAGCCCCTGGCAGCTccgggcaatgct > 2:1434330/1‑279 (MQ=255)
tGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTggcggc > 1:1825622/1‑289 (MQ=255)
tctGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGc > 1:1082974/1‑170 (MQ=255)
tctGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGc > 1:2092767/1‑170 (MQ=255)
tGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCaa > 1:822774/1‑289 (MQ=255)
gCGAAGGCCGCAAGCAGCGTGGACCGGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGcc < 1:916855/288‑1 (MQ=255)
aGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAAt < 1:1585890/289‑1 (MQ=255)
aGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGAAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAAt < 1:125092/289‑1 (MQ=255)
cAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCaaaa > 1:562974/1‑266 (MQ=255)
aCCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATgcgc < 2:1096360/288‑1 (MQ=255)
aCCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATgcgc < 2:2131594/288‑1 (MQ=255)
agcaaagcaaAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCata < 1:602988/226‑1 (MQ=255)
agcaaagcaaAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCt > 1:964327/1‑289 (MQ=255)
agcaaaACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATgcgc > 2:680826/1‑278 (MQ=255)
aaaCGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATg < 2:825968/289‑1 (MQ=255)
cGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATc < 1:1261010/207‑1 (MQ=255)
tGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCG‑ACTACGGt < 1:996685/289‑1 (MQ=255)
gtcggtcgTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCG‑ACTACGGTCtgg > 1:175167/1‑289 (MQ=255)
gTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCG‑ACTACGGTCTGGTGGGCGa < 1:806030/289‑1 (MQ=255)
ggACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCG‑ACTACGGTCTGGTGGGCGat < 2:1600444/288‑1 (MQ=255)
ggACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCG‑ACTACGGTCTGGTGGGCGat < 1:1434330/288‑1 (MQ=255)
gcggcgCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAACTCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATTGCTGGCGGCAACGGCGCCAAAGTGATTTTCGCAATCCAATATGCTAAAAATGCCCCAAACTTCAACTAAGCCGTACAAC‑GCCTGGTGGGCGatgacttca > 2:52700/1‑282 (MQ=255)
gcggcgCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACg > 2:2235678/1‑159 (MQ=255)
gcggcgCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCG‑ACTACGGTCTGGTGGGGGATACCAACa > 2:899044/1‑289 (MQ=255)
gcggcgCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCG‑ACTACGGTCTGGTGGGCGat < 2:1928972/282‑1 (MQ=255)
gcggcgCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCG‑ACTACGGTCTGGTGGGCGATATCTaaa > 2:1299247/1‑287 (MQ=255)
gcggcgCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCG‑ACTACGGTCTGGTGGGCGATATCTACa > 1:160704/1‑289 (MQ=255)
gcggcgCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCG‑ACTACGGTCTGGTGGGCGATATCTACa > 1:1979733/1‑289 (MQ=255)
gcggcgCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAAGGCGCCAATCTTCAACTATTCCG‑ACCTCGGTACGGTTGTCGatacccaaa > 2:1179716/1‑283 (MQ=255)
gcggcgCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGAAGGAGCGTGAACGTTATAT‑CAGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTggg > 2:111343/1‑164 (MQ=255)
cggcgCAGGATGACCTAAAAATGGTCCACGAACTGGCGGTGGTGCTGAATGCTGAAGTCGGCTGATCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGGGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCG‑ACTACGGTCTGGTGGGCGATATCTACa < 1:1391986/288‑1 (MQ=255)
aTGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCG‑ACTACGGTCTGGTGGGCGATATCTACAAAGTCGTcc < 1:384490/288‑1 (MQ=255)
aTGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCG‑ACTACGGTCTGGTGGGCGATATCTACAAAGTCGTcc < 1:1459955/288‑1 (MQ=255)
ccTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCaaaa > 2:2098535/1‑196 (MQ=255)
ccTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCG‑ACTACGGTCTGGTGGGCGat < 2:114619/268‑1 (MQ=255)
ccTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCG‑ACTACGGTCTGGTGGGCGATATCTACAAAGTCGTccctgc < 2:1825622/288‑1 (MQ=255)
ccTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCG‑ACTACGGTCTGGTGGGCGATATCTACAAAGTCGTccctgc < 1:1298545/288‑1 (MQ=255)
ccTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCG‑ACTACGGTCTGGTGGGCGATATCTACAAAGTCGTccctgc < 1:860239/288‑1 (MQ=255)
ccTAAAAATGGGCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCG‑ACTACGGTCTGGTGGGCGATATCTACAAAGTCGTccccgc < 1:249075/288‑1 (MQ=255)
gTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGCTTGTCGCCATCAATAAAGAAAAAAATTGGCCACTTTTTAACTATTCCG‑ACTACGGCTTGGTGGGCGACGTTTACTAAGTCGTCCTTTCCCTGttttac > 2:1323964/1‑285 (MQ=255)
tCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCG‑ACTACGGTCTGGTGGGCGATATCTACAAAGTCGTCCCTGCCCTGATTAGcc > 2:650645/1‑288 (MQ=255)
tCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCG‑ACTACGGTCTGGTGGGCGATATCTACAAAGTCGTCCCTGCCCTGATTAGCCa > 1:2175039/1‑289 (MQ=255)
tCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTCAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCG‑ACTACGGTCTAGTGGGCGATATCTACAAAGTCGTCCCTGCCCTGATTAGCCa > 1:1497923/1‑289 (MQ=255)
aCGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCG‑ACTACGGTCTGGTGGGCGATATCTACAAAGTCGTCCCTGCCCTGATTAGCCAGtt > 1:716535/1‑289 (MQ=255)
aCTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCG‑ACTACGGTCTGGTGGGCGATATCTACAAAGTCGTCCCTGCCCTGATTAGCCAGTTGAg < 2:2175039/288‑1 (MQ=255)
gTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCG‑ACTACGGTCTGGTGGGCGATATCTACAAAgt < 2:1656449/251‑1 (MQ=255)
gTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCG‑ACTACGGTCTGGTGGGCGATATCTACAAAGTCGTCCCTGCCCGGATTAGCCAGTTGACCCGCTAATTc > 1:1700932/1‑288 (MQ=255)
ttactggttaaGTCGGCTGTTCACGTACAATTGCCGAAGGAGACAATT‑GGATTGAGCGTGAACGTTATAT‑CGGGGTCTCCGGGGTGTTGCTGAAAGCCGAGC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTGCAACTATGCCG‑ACTACGGGCTGGTGGGCGATATCTACAAAGTCGTCCCTGCCCTGATTAGCCAGTTGAGCCGCTAATTCCCCt < 2:1461490/279‑1 (MQ=255)
gaatgctgaaGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTCAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCG‑ACTACGGTCTAGTGGGCGATATCTACAAAGTCGTCCCTGCCCTGATTAGCCAGTTGAGCCGCTAATTCCCCttt < 2:1497923/289‑1 (MQ=255)
aaGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCG‑ACTACGGTCTGGTGGGCGATATCTACAAAGTCGTCCCTGCCCTGa > 1:1344287/1‑252 (MQ=255)
cGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCG‑ACTACGGTCTGGTGGGCGATATCTACAAAGTCGTCCCTGCCCTGATTAGCCAGTTGAGCCGCTAATTCCCCTTTCAACCACAtctc < 2:424417/289‑1 (MQ=255)
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AAGATCAACAGCCCGCTGGCGATCATTACCCTTGCACCCGGTGTTCAGGAACCGTGCACCAGTGATACCTCTCATCAGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTAGTCGTCCAATTGCCGAAGGCGAGAACT‑GGATGGAGCGTGAACGTTATAT‑CGGTGTCTCCGGCGTGTTGCTGAAATCCGATC‑TCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCG‑ACTACGGTCTGGTGGGCGATATCTACAAAGTCGTCCCTGCCCTGATTAGCCAGTTGAGCCGCTAATTCCCCTTTCAACCACATCTC > CP042583/1462757‑1463311
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
