Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,783,524 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,783,5240AT98.7% 537.6 / NA 234intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (3/0);  new base T (105/125);  total (109/125)
Fisher's exact test for biased strand distribution p-value = 9.81e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,783,5250GC99.2% 535.4 / NA 234intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/2);  new base C (109/123);  total (109/125)
Fisher's exact test for biased strand distribution p-value = 5.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,783,5260CG100.0% 553.6 / NA 234intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (109/125);  total (109/125)

Only 100 of 234 total aligned reads displayed.

TGGCTGCCGCCCGCCGGATAGTGTGCCAGGTTGTTGAAGAAATTATGGCTCGACTGGCAAAGGAAGTTCGTCAGGCTTTTTCTGGTGTCCGCGATCGCCGTCGCCGTAGTTTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGAAGCATGGTCGATAGCGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGTCATTATCCTCGTGAGCGATTTTTACGAAGGGGGTAGTAGTAGTTT  >  CP042583/1783246‑1783795
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                             
tGGCTGCCGCCCGCCGGATAGTGTGCCAGGTTGTTGAAGAAATTATGGCTCGACTGGCAAAGGAAGTTCGTCAGGCTTTTTCTGGTGTCCGCGATCGCCGTCGCCGTTCATTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGa                                                                                                                                                                                                                                                                       >  2:865174/1‑289 (MQ=255)
   cTGCCGCCCGCCGGATAGTGTGCCAGGTTGTTGAAGAAATTATGGCTCGACTGGCAAAGGAAGTTCGTCAGGCTTTTTCTGGTGTCCGCGATCGCCGTCGCCGTTCATTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGAtt                                                                                                                                                                                                                                                                     <  1:865174/288‑2 (MQ=255)
       ggccagccGGGTAGTGGGCCAGGTTGTTGAAGAAATTATGGCTCGACTGGCAAAGGAAGTTCGTCAGGCTTTTTCTGGTGTCCGCGATCGCCGTCGCCGTTCATTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGAttcggtg                                                                                                                                                                                                                                                                <  2:666254/288‑7 (MQ=255)
       cgcccgccGGATAGTGTGCCAGGTTGTTGAAGAAATTATGGCTCGACTGGCAAAGGAAGTTCGTCAGGCTTTTTCTGGTGTCCGCGATCGCCGTCGCCGTTCATTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGAttcggtg                                                                                                                                                                                                                                                                >  1:823475/1‑283 (MQ=255)
       cgcccgccGGATAGTGTGCCAGGTTGTTGAAGAAATTATGGCTCGACTGGCAAAGGAAGTTCGTCAGGCTTTTTCTGGTGTCCGCGATCGCCGTCGCCGTTCATTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGAttcggt                                                                                                                                                                                                                                                                 <  1:1991366/288‑6 (MQ=255)
         cccgccGGAAAGTGTGCCAGGTTGTTGAAGAATTTATGGCTCGACTGGCAAAGGAAGTTCGTCAGGCTTTTTCTGGTGTCCGCGATCGCCGTCGCCGTTCATTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGAttcggtgat                                                                                                                                                                                                                                                              <  2:561497/289‑9 (MQ=255)
            gccgGATAGTGTGCCAGGTTGTTGAAGAAATTATGGCTCGACTGGCAAAGGAAGTTCGTCAGGCTTTTTCTGGTGTCCGCGATCGCCGTCGCCGTTCATTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCa                                                                                                                                                                                                                                                           <  1:638171/289‑1 (MQ=255)
            gccgGATAGTGTGCCAGGTTGTTGAAGAAATTATGGCTCGACTGGCAAAGGAAGTTCGTCAGGCTTTTTCTGGTGTCCGCGATCGCCGTCGCCGTTCATTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCa                                                                                                                                                                                                                                                           <  1:565152/289‑1 (MQ=255)
                              ttgttgAAGAAATTATGGCTCGACTGGCAAAGGAAGTTCGTCAGGCTTTTTCTGGTGTCCGCGATCGCCGTCGCCGTTCATTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATggc                                                                                                                                                                                                                                            <  1:1330395/286‑1 (MQ=255)
                                gttgAAGAAATTATGGCTCGACGTGCAAAGGAAGGTCGTCAGGCTTTTTCTGGGGTCCGCGATCGCCGTCGCCGTTCATTTTTTCCACTGTCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCGGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCt                                                                                                                                                                                                                                       <  2:1854850/289‑1 (MQ=255)
                                   gaagaaATTATGGCTCGACTGGCAAAGGAAGTTCGTCAGGCTTTTTCTGGTGTCCGCGATCGCCGTCGCCGTTCATTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACCCTGCGGTGATGGCGGCCTGtt                                                                                                                                                                                                                                    >  1:906035/1‑289 (MQ=255)
                                           tATGGCTCACTTGGAAAAGGAAGTTGTTCAGGCTTGTTCTGGGTGCCGCGATCGCCGTCGCCGTTCATTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACC‑CTGCGCGCCACCCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAg                                                                                                                                                                                                                            <  2:283064/289‑1 (MQ=255)
                                                 tCGACTGGCAAAGGAAGTTCGTCAGGCTTTTTCTGGTGTCCGCGATCGCCGTCGCCGTTCATTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTAccc                                                                                                                                                                                                                      >  1:1762565/1‑289 (MQ=255)
                                                   gACTGGCAAAGGAAGTTCGTCAGGCTTTTTCTGGTGTCCGCGATCGCCGTCGCCGTTCATTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCgg                                                                                                                                                                                                                    <  1:1529285/289‑1 (MQ=255)
                                                      tGGCAAAGGAAGTTCGTCAGGCTGTTTCTGGTGTCCGCGATCGCCGTCGCCGTTCATTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCAt                                                                                                                                                                                                                 <  1:1965037/289‑1 (MQ=255)
                                                            aGGAAGTTCGTCAGGCTTTTTCTGGTGTCCGCGATCGCCGTCGCCGTTCATTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTAc                                                                                                                                                                                                           <  1:925636/289‑1 (MQ=255)
                                                                  ttCGTCAGGCTTTTTCTGGTGTCCGCGATCGCCGTCGCCGTTCATTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCa                                                                                                                                                                                                        >  1:1297563/1‑286 (MQ=255)
                                                                  ttCGTCAGGCTTTTTCTGGTGTCCGCGATCGCCGTCGCCGTTCATTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCa                                                                                                                                                                                                        >  2:1478706/1‑286 (MQ=255)
                                                                       ccggCTTTTTCTGGTGTCCGCGATCGCCGTCGCCGTTCATTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCtggtg                                                                                                                                                                                                 <  1:1920220/286‑1 (MQ=255)
                                                                              tttCTGGTGTCCGCGATCGCCGTCGCCGTTCATTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGAGGGTCGATTCGGTGATCCACTCTGCGGTTATGGCGGCCTGTTTGTGGCCGTGACCCGGCATTCGACCCCTTCGGGTGGGGTTTg                                                                                                                                                                                          >  2:1838750/1‑288 (MQ=255)
                                                                                    gtgtCCGCGATCGCCGTCGCCGTTCATTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTCACCCGGCATTCGTACCCATCTGGTGGTGTTTGACACCAg                                                                                                                                                                                   >  2:328116/1‑289 (MQ=255)
                                                                                      gtCCGCGATCGCCGTCGCCGTTCATTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGAGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGcg                                                                                                                                                                                 >  1:398274/1‑289 (MQ=255)
                                                                                         cgcgATCGCCGTCGCCGTTCATTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCGGGCATTCGTACCCATCTGGTGGCGTTTGATCCAAGctact                                                                                                                                                                              >  2:6091/1‑285 (MQ=255)
                                                                                         cgcgATCGCCGTCGCCGTTCATTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGcgtcg                                                                                                                                                                              >  1:1441341/1‑289 (MQ=255)
                                                                                         cgcgATCGCCGTCGCCGTTCATTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGAATGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGcgtgg                                                                                                                                                                              >  1:232215/1‑287 (MQ=255)
                                                                                         cgcgATCGCCCTCGCCGTTCATTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCCTTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACCCTGCGGTGATGGCGGCCTGTTGGTGGCCGTTACCCGGCATGACTACCCAGCTGGTGGCGTTTGACATCAGcctcg                                                                                                                                                                              >  2:526988/1‑289 (MQ=255)
                                                                                            gATCGCCGTCGCCGTTCATTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGtt                                                                                                                                                                            <  1:792840/288‑1 (MQ=255)
                                                                                            gATCGCCGTCGCCGTTCATTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGtt                                                                                                                                                                            <  1:1484843/288‑1 (MQ=255)
                                                                                              tcgccgtcgccgTTCATTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGAt                                                                                                                                                                         <  1:67693/289‑1 (MQ=255)
                                                                                                gccgtcgccgtGCATTTATTCCCCGGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGAtct                                                                                                                                                                       <  2:192933/289‑1 (MQ=255)
                                                                                                         gttcatttATTCCCCTGGCGCGATACTTTGATTTCAAAAGTCCT‑CTCCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGCACCATGGCAACTGGTCTTACTGGTTGATCAAAGCGTATCGATGGTCGATTCTGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGa                                                                                                                                                              <  1:2045015/284‑1 (MQ=255)
                                                                                                         gttcatttATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCTTTTGACACAAGCGTCGTTGATCTCACGGCAGa                                                                                                                                                              <  1:1257197/284‑1 (MQ=255)
                                                                                                                 aTTCCACTGGCGCGAAACATTGATTCCAAAAGAACT‑CAGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCg                                                                                                                                                      <  2:106362/289‑1 (MQ=255)
                                                                                                                  ttCCACTGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGAttcggtgat                                                                                                                                                                                                                                                              <  2:787032/184‑9 (MQ=255)
                                                                                                                    ccACTGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATc                                                                                                                                                   <  2:673716/289‑1 (MQ=255)
                                                                                                                     ctcctgcgcGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATcc                                                                                                                                                  <  2:1516844/284‑1 (MQ=255)
                                                                                                                       cTGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCgg                                                                                                                                                >  1:1600860/1‑289 (MQ=255)
                                                                                                                          gcgcGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTTGCGTTTGACACAAGCGGCGTTGATCTAACGGCAGACGTTGCCGATCCGGtga                                                                                                                                             >  2:910402/1‑287 (MQ=255)
                                                                                                                           accaaatcTTTGCTTTCAAAGCTACC‑CCGCGCTCCACCCTGCACCACTGACACCCGACA‑CACGGCAAGTTGTAGATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTag                                                                                                                                             <  2:847998/281‑1 (MQ=255)
                                                                                                                            gcgAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTagag                                                                                                                                           <  1:2210801/289‑1 (MQ=255)
                                                                                                                             cgAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCTTGGTTGATCCTACGGCAGACGTTGCCGATCCGGTGGAGt                                                                                                                                          >  1:780382/1‑289 (MQ=255)
                                                                                                                             cgAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTagag                                                                                                                                           <  2:823475/288‑1 (MQ=255)
                                                                                                                                 aCTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGttatt                                                                                                                                      <  2:716968/289‑1 (MQ=255)
                                                                                                                                 aCTTTGATTGCACAAG‑ACTCCTCCCCGCCAAACAGCAACACTGGCACCCCCAA‑CCCGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGttatt                                                                                                                                      <  2:974927/289‑1 (MQ=255)
                                                                                                                                    ttgtcttCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTTGCACCCGCAT‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCCAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAAt                                                                                                                                   <  1:1957726/284‑1 (MQ=255)
                                                                                                                                    ttGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGACGATCCGGTAGAGTTATTAAt                                                                                                                                   <  1:536724/289‑1 (MQ=255)
                                                                                                                                         taaaaaaGTAAC‑GTGCACCCCAAACCGCAACCACGGAACCCCAAA‑AACGGGAAGGTGTATATCCAAACCCCCCGCCTTAACAGACCCATTAAACCCCAAAGCGAACCATGGCAAACGGTCTTACCGGGTGAACAAAGCGGATCGAATGTCGGTTCGGTGAGCCACTCTGCGGTGATTGGGGCCTGGTTGGGGCAGTTACCCGGCAATCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAg                                                                                                                              <  2:780382/286‑1 (MQ=255)
                                                                                                                                                   accccgcgcgcCAACCTGCACAACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTgg                                                                                                                     <  2:209826/284‑1 (MQ=255)
                                                                                                                                                       tGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGa                                                                                                                                                     >  1:949329/1‑253 (MQ=255)
                                                                                                                                                       tGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTCTTAATCAAAGCACAGTTGggcgg                                                                                                                 >  2:1642137/1‑289 (MQ=255)
                                                                                                                                                       tGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGggcgg                                                                                                                 >  2:1982071/1‑289 (MQ=255)
                                                                                                                                                         cgcgcCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCActc                                                                                                                                                                                                                                                        >  1:1123163/1‑152 (MQ=255)
                                                                                                                                                         cgcgcCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGGTATTAATGAAAGTACAGTTGGgcggcg                                                                                                               >  1:622539/1‑289 (MQ=255)
                                                                                                                                                                 ccTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGa                                                                                                                                                              <  2:1755446/234‑1 (MQ=255)
                                                                                                                                                                   tGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAata                                                                                                      >  1:1216330/1‑288 (MQ=255)
                                                                                                                                                                        cacTGGCACCCGCCA‑CACGGCGAGTTGGATATCGGACCCCCCCGCTTTACCAGCCGCATTAAACGCCCAAGCTCACAATGGCAACTGGGCCTACTGGTTGATCAAGGCGGATCGACGGTCGATTCGGTAATTCACTCCGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCCGCCTTCGTCCCCATCTGGTGGCGTTTGACAAAAGCGTCGTGTATCTCACGGCAGACGTTGCCGCTCCGGTAGAGTTATTAATGAAAGTACAGTCGTGCCGCGGGACCAATATCGCCa                                                                                                <  2:467699/289‑1 (MQ=255)
                                                                                                                                                                        cacTGGCA‑CCGCAAGCACGGCAAATTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCAAAAGGGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCa                                                                                                <  2:1007207/289‑1 (MQ=255)
                                                                                                                                                                           tGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTg                                                                                             <  1:1838750/289‑1 (MQ=255)
                                                                                                                                                                           tGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTg                                                                                             <  1:301852/289‑1 (MQ=255)
                                                                                                                                                                            ggCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGggcggc                                                                                                                >  1:923355/1‑269 (MQ=255)
                                                                                                                                                                             gCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGa                                                                                                            <  1:1677624/272‑1 (MQ=255)
                                                                                                                                                                             gCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGa                                                                                                            >  2:1677624/1‑272 (MQ=255)
                                                                                                                                                                              cACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGcc                                                                                           <  2:1769400/288‑1 (MQ=255)
                                                                                                                                                                                  cGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGCTCCGGGAGAGGTATTAATGAAAGTAAATTTGGGCGGCGGGACCAGTATCTGCAGTGCCGTGGa                                                                                      >  2:53891/1‑289 (MQ=255)
                                                                                                                                                                                   gCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTAc                                                                                                                                                                                                           <  1:1006580/171‑1 (MQ=255)
                                                                                                                                                                                     aa‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTa                                                                                   <  2:299843/289‑1 (MQ=255)
                                                                                                                                                                                                gTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCa                                                                          >  1:289652/1‑288 (MQ=255)
                                                                                                                                                                                                         cGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCa                                                                                                >  1:1469021/1‑257 (MQ=255)
                                                                                                                                                                                                           aaTCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGTGCTCACCGCAGACGTTGCCGATTCGGTAGAGTTATTAATGAAAGTACACTTGGGCGGCGGGGCCATCCTCGCCCGTGCCGCGGAGTATGGTCGGCACCTTAGTGacac                                                              >  2:1309031/1‑286 (MQ=255)
                                                                                                                                                                                                           aaTCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTAc                                                                                                                           >  2:120215/1‑228 (MQ=255)
                                                                                                                                                                                                           aaTCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGaaca                                                              >  1:1882699/1‑289 (MQ=255)
                                                                                                                                                                                                           aaTCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCATAccc                                                                                                                                                                                                         >  1:1738849/1‑150 (MQ=255)
                                                                                                                                                                                                           aaTCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGGCTTACTGGTTGATCAAAGCGGATCGATTGTCGATTCGGTGATCCACTCTGCGGGTATGGCGGCCTGTTTGTGGCAGTTAGCCGGCATTCGTACACATCTGGTTGAGTTTGACACAAGCGGCGTTGATCTTACGGCAGACGTTGCCGATCCGGTAGAGTCATTAATGACAGTACAGTTGGGCGGCGGGACCAATATCGCCGGTGCCGTGGGGTATGGTCGGCAAATTATTGaata                                                              >  2:588478/1‑287 (MQ=255)
                                                                                                                                                                                                            aTCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACCCAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGCTATTAATGAAAGACCAGTTGGGCGGCGGGACCCATATCGCCAGTGCCGCGCACGATGGTCGGCactttgtggcaca                                                              >  2:1235014/1‑276 (MQ=255)
                                                                                                                                                                                                             tCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGaacaac                                                            <  1:588478/289‑1 (MQ=255)
                                                                                                                                                                                                              ccccccGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTag                                                                                                                                             >  1:516123/1‑207 (MQ=255)
                                                                                                                                                                                                              ccccccGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTag                                                                                                                                             <  2:516123/207‑1 (MQ=255)
                                                                                                                                                                                                                 cccGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGa                                                                                      >  1:895715/1‑259 (MQ=255)
                                                                                                                                                                                                                    gCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGCTCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGaa                                                     <  1:1040987/289‑1 (MQ=255)
                                                                                                                                                                                                                     cTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGaaa                                                    >  1:1404063/1‑289 (MQ=255)
                                                                                                                                                                                                                      tttAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGaaaa                                                   >  2:957196/1‑289 (MQ=255)
                                                                                                                                                                                                                          accgCCACATTACACGCCAAAGAGACCAATGGCAACGGGTCTTACTGGTTGATCAAAGCGGTTCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGt                                               <  2:2197125/286‑1 (MQ=255)
                                                                                                                                                                                                                              ccGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCg                                                                                                                                                                                                                                                                        >  2:923457/1‑68 (MQ=255)
                                                                                                                                                                                                                              ccGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCtggtg                                                                                                                                                                                                 <  1:502741/139‑1 (MQ=255)
                                                                                                                                                                                                                              ccGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTAGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGTCAtt                                           >  1:2075038/1‑289 (MQ=255)
                                                                                                                                                                                                                              ccGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTAATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGTCAtt                                           >  1:544851/1‑289 (MQ=255)
                                                                                                                                                                                                                               cGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGTCa                                             <  2:155624/286‑1 (MQ=255)
                                                                                                                                                                                                                                gCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACTTTGCCGATCCGGTAGAGGTATTAATGACAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGCGTAGTATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGTCATTa                                          >  2:2005804/1‑288 (MQ=255)
                                                                                                                                                                                                                                                      aTGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGTCATTATCCTCGTGAGCGATTTTTACGaa                   <  2:1291798/289‑1 (MQ=255)
                                                                                                                                                                                                                                                        ggcgactgtgtttACTGGTTGGTCAAAGCGGATCGATGGTCGATTCGGTGTTCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGTCATTATCCTCGTGAGCGATTTTTACGAAgg                 <  2:1958304/278‑1 (MQ=255)
                                                                                                                                                                                                                                                            aCTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGTCATTATCCTCGTGAGCGATTTTTACGAAGGGGgt             >  1:181396/1‑289 (MQ=255)
                                                                                                                                                                                                                                                              tGGTCTTACTGGTTGATCAAAGCGGATCGATGTTCGATTCGGTGTTCCACTCTGCGGTGATGGCGGCGTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGTCATTATCCTCGTGAGCGATTTTTACGAAGGGGgttc           <  1:2136120/289‑3 (MQ=255)
                                                                                                                                                                                                                                                              tGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGTCATTATCCTCGTGAGCGATTTTTACGAAGGGGgttc           <  2:1456351/289‑3 (MQ=255)
                                                                                                                                                                                                                                                              tGGTCTTACTGGGGTGTCAAAGCGGATCGATGGTCGATTCGGTGGTCCCCTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGGTCCCATCTGGTGGCGTTTGACAAGAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTACCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGTCATTATCCTCGTGAGCGATTTTTACGAAGGGGgttc           <  2:929412/289‑3 (MQ=255)
                                                                                                                                                                                                                                                              tGGTCTTACGGGTTGATCAAAGCGGATGGATGGTCGATTCTGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGTCATTATCCTCGTGAGCGATTTTTACGAAGGGGgttc           <  2:2219819/289‑3 (MQ=255)
                                                                                                                                                                                                                                                               ggTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGTCATTATCCTCGTGAGCGAttttt                        >  2:1632824/1‑275 (MQ=255)
                                                                                                                                                                                                                                                               ggTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGTCATTATCCTCGTGAGCGAttttt                        <  1:1632824/275‑1 (MQ=255)
                                                                                                                                                                                                                                                               ggTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGCAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGTCATTATCCTCGTGAGCGATTTTTACGAAGGGGgttca          >  2:1357027/1‑286 (MQ=255)
                                                                                                                                                                                                                                                                          ttGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGTCATTATCCTCGTGAGCGATTTTGACGAAGGGGgttcatcatcatt  >  1:1586862/1‑275 (MQ=255)
                                                                                                                                                                                                                                                                           tGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCg                                                                                                                                                      >  1:983681/1‑137 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                             
TGGCTGCCGCCCGCCGGATAGTGTGCCAGGTTGTTGAAGAAATTATGGCTCGACTGGCAAAGGAAGTTCGTCAGGCTTTTTCTGGTGTCCGCGATCGCCGTCGCCGTAGTTTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACT‑CTGCGCGCCAACCTGCAACACTGGCACCCGCAA‑CACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGAAGCATGGTCGATAGCGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGTCATTATCCTCGTGAGCGATTTTTACGAAGGGGGTAGTAGTAGTTT  >  CP042583/1783246‑1783795

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A