Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,784,632 3 bp→TCA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,784,6320AT99.2% 613.8 / NA 262intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (1/1);  new base T (128/132);  total (129/133)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,784,6330GC99.6% 617.8 / NA 262intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (128/133);  minor base A (1/0);  total (129/133)
Fisher's exact test for biased strand distribution p-value = 4.92e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,784,6340TA98.9% 617.6 / ‑6.2 262intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (127/131);  minor base C (1/2);  total (129/133)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 263 total aligned reads displayed.

CTGGCTACCCTTCCCGATGCTACCCGCAAACGCGCACAGGCGCTGGTCGCTAAAGGCATCACCATTGAGTTGTTCTGTGCGCCGGGTGAAATTCCCTCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACAAGTTCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCG‑CTGGGTGAGTGAAAGCCTACGGCAACTGCGCGC‑CAGCGTTGATGCCTTCCACGCCCGCGCCAGCCACTATAATGCCGGAGAATGCTTACATCAGCTTGCGGCATTAAACAGTCGATTAAA  >  CP042583/1784347‑1784912
                                                                                                                                                                                                                                                                                              |||                                                                                                                                                                                                                                                                                        
                  gCTACCCGCAAACGCGCACAGGCGCTGGTCGCTAAAGGCATCACCATTGAGTTGTTCTGTGCGCCGGGTGAAATTCCCTCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCa                                                                                                                                                                                                                                                                       <  1:1941859/289‑1 (MQ=255)
                  gCTACCCGCAAACGCGCACAGGCGCTGGTCGCTAAAGGCATCACCATTGAGTTGTTCTGTGCGCCGGGTGAAATTCCCTCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAAACAGTTAATCTGGACGATGCGCCGCGAACACG‑TCACAACACCTTACGATCCGTGTTCCa                                                                                                                                                                                                                                                                       >  2:1964091/1‑289 (MQ=255)
                      cccGCAAACGCGCACAGGCGCTGGTCGCTAAAGGCATCACCATTGAGTTGTTCTGTGCGCCGGGTGAAATTCCCTCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCCGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCga                                                                                                                                                                                                                                                                   >  1:1865196/1‑289 (MQ=255)
                                 gcACAGGCGCTGGTCGCTAAGGGCATCACCATTGAGTTGTTCTGTGGGCCGGGTGAAATTCCCTCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAAcg                                                                                                                                                                                                                                                        <  2:2062689/289‑1 (MQ=255)
                                   acaGGCGCTGGTCGCTAAAGGCATCACCATTGAGTTGTTCTGTGCGCCGGGTGAAATTCCCTCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAAcgcg                                                                                                                                                                                                                                                      <  1:776589/289‑1 (MQ=255)
                                                 cTAAAGGCATCACCATTGAGTTGTTCTGTGCGCCGGGTGAAATTCCCTCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGCACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGAAGCAAGCAGAATTTCACCATTTAATCTGGCAGATGCGCAGAGAACACG‑ACACATCCTCTGACGATCCGTTTGACAGCGAAGAAGGAAACGCGTGTCCTCAATATGt                                                                                                                                                                                                                                        >  2:1482410/1‑289 (MQ=255)
                                                    aatgCATCACCATTGAGTTGTTCTGTGCGCCGGGTGAGATTCCCTCTGCCCGCTTACCGATAAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATAGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCa                                                                                                                                                                                                                                     <  1:1066665/286‑1 (MQ=255)
                                                     aGGCATCACCATTGAGTTGTTCTGTGCGCCGGGTGAAATTCCCTCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCa                                                                                                                                                                                                                                     >  1:402035/1‑288 (MQ=255)
                                                         aTCACCATTGAGTTGTTCTGTGCGCCGGGTGAAATTCCCTCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGACCACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAAt                                                                                                                                                                                                                                >  2:1229917/1‑289 (MQ=255)
                                                         aTCACCATTGAGTTGTTCTGTGCGCCGGGTGAAATTCCCTCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAAt                                                                                                                                                                                                                                <  1:549646/289‑1 (MQ=255)
                                                                ttGAGTTGTTCTTTGCGCCGGGTGAAATTCCATCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCa                                                                                                                                                                                                                         <  1:912167/289‑1 (MQ=255)
                                                                ttGAGTTGTTCTGTGCGCCGGGTGAAATTCCCTCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCa                                                                                                                                                                                                                         <  2:1471976/289‑1 (MQ=255)
                                                                ttGAGTTGTTCTGTGCGCCGGGTGAAATTCCCTCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCa                                                                                                                                                                                                                         <  1:2252504/289‑1 (MQ=255)
                                                                ttGAGTTGTTCTGTGCGCCGGGTGAAATTCCCTCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCa                                                                                                                                                                                                                         <  1:2111630/289‑1 (MQ=255)
                                                                tggggttgttCTGTGCGCCGGGTGAAATTCCCTCTGCCCGGTTACCGGTGGGCGGTGTGCGTTTTTATTCCCGTAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCa                                                                                                                                                                                                                         <  1:1918198/285‑1 (MQ=255)
                                                                      tgttCTGTGCGCCGGGTGAAATTCCCTCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACAtt                                                                                                                                                                                                                   <  1:2177396/289‑1 (MQ=255)
                                                                      tgttCTGTGCGCCGGGTGAAATTCCCTCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACAtt                                                                                                                                                                                                                   >  2:1006825/1‑289 (MQ=255)
                                                                        ttCTGTGCGCCGGGTGAAATTCCCTCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTAt                                                                                                                                                                                                                 >  1:828733/1‑289 (MQ=255)
                                                                        ttCTGTGCGCCGGGTGAAATTCCCTCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTAt                                                                                                                                                                                                                 >  2:1126943/1‑289 (MQ=255)
                                                                             tgCGCCGGGTGAAATTCCCTCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTTGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATAATCTGACGATCCGTTTGCCAGCGAACAACGCAACGCGTGTCGTAAATCTGTTCAGCAATTAATCCAGCCATGCTGGCtt                                                                                                                                                                                                            >  2:1363453/1‑289 (MQ=255)
                                                                             tgCGCCGGGTGAAATTCCCTCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCtt                                                                                                                                                                                                            >  2:1543701/1‑289 (MQ=255)
                                                                             tgCGCCGGGTGAAATTCCCTCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCtt                                                                                                                                                                                                            >  1:1075798/1‑289 (MQ=255)
                                                                             tgCGCCGGGTGAAATTCCCTCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCCGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCtt                                                                                                                                                                                                            >  2:375092/1‑289 (MQ=255)
                                                                               cgcCGGGTGAAATTCCCTCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATg                                                                                                                                                                                                                                         >  2:626337/1‑258 (MQ=255)
                                                                               cgcCGGGTGAAATTCCCTCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTg                                                                                                                                                                                                           <  1:167074/288‑1 (MQ=255)
                                                                                gcCGGGTGAAATTCCCTCGGCCCGTTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTgg                                                                                                                                                                                                          <  2:1988929/288‑1 (MQ=255)
                                                                                  cGGGTGAAATTCCCTCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCg                                                                                                                                                                                                                                                                    <  2:1267558/228‑1 (MQ=255)
                                                                                  cGGGTGAAATTCCCTCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCg                                                                                                                                                                                                                                                                    >  1:1267558/1‑228 (MQ=255)
                                                                                  cGGGTGAAATTCCCTCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTggcg                                                                                                                                                                                                        >  2:548206/1‑288 (MQ=255)
                                                                                       gAAATTCCCTCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCCGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATca                                                                                                                                                                                                  <  1:375092/289‑1 (MQ=255)
                                                                                               ctctGCCCGCTTACCGATGAGCGATTTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCTCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCg                                                                                                                                                                                          <  1:1482410/289‑1 (MQ=255)
                                                                                               ctctGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCg                                                                                                                                                                                          <  1:1006825/289‑1 (MQ=255)
                                                                                               ccatGCCCGCTTACCGGTGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCg                                                                                                                                                                                          <  2:1803461/286‑1 (MQ=255)
                                                                                                   gCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGGATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCa                                                                                                                                                                                      <  2:465064/289‑1 (MQ=255)
                                                                                                               aTGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAg                                                                                                                                                                           >  2:871050/1‑288 (MQ=255)
                                                                                                                tGAGCGATTTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATGGAAGGCACACTTTGCGAACATGACGTACTGGCGGTACAGGCCTGCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGAAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAgg                                                                                                                                                                          <  1:1753308/288‑1 (MQ=255)
                                                                                                                tGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAgg                                                                                                                                                                          <  1:753835/288‑1 (MQ=255)
                                                                                                                tGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAgg                                                                                                                                                                          <  1:1703537/288‑1 (MQ=255)
                                                                                                                       tgtgCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTAGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTc                                                                                                                                                                  >  2:2116523/1‑289 (MQ=255)
                                                                                                                         tgCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTgg                                                                                                                                                                                                          <  1:79827/247‑1 (MQ=255)
                                                                                                                         tgCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCa                                                                                                                                                                 >  1:1377237/1‑288 (MQ=255)
                                                                                                                             tttttATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGTCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACcgc                                                                                                                                                            >  1:356592/1‑289 (MQ=255)
                                                                                                                                   ttCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCACAGCGTGTAGTCAATATGTTCAGCAATTAAGCCAGGAATTAATGCTTTGCGGCGTCAGGCATCCTCTCACACATTGTGGCGCAGTGTTCACCCGCACAta                                                                                                                                                       >  2:1034777/1‑287 (MQ=255)
                                                                                                                                        gcagcaGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCCTCAGCCAGCCGCCCATCCATTACGAAGCAGCCTTCAACCGCCCATTGCAggc                                                                                                                                                 >  2:2162252/1‑289 (MQ=255)
                                                                                                                                             ggTATTCGTTTCGCCCGTTGTGATTGTATGTAAGGCACCATTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCa                                                                                                                                             <  2:2189309/287‑1 (MQ=255)
                                                                                                                                                aTTCGTATGGCCCGTTTTAATTGTTATGAAGGCAAACTTTGCGAGCATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCa                                                                                                                                             <  1:1962007/285‑1 (MQ=255)
                                                                                                                                                 ttCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAgaga                                                                                                                                         >  1:1786415/1‑288 (MQ=255)
                                                                                                                                                   cGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCt                                                                                                                                      <  1:1362667/289‑1 (MQ=255)
                                                                                                                                                    gtgtccgacGTGGTGGTTGTATTCAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTGGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGAAGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTg                                                                                                                                     <  2:288705/281‑1 (MQ=255)
                                                                                                                                                      ttCGCCCGTTGTGATTGTATTGACGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAAGATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCACTAGCCCGCCGCGCCTCCATTACGGGGCAGCATTCAACCGCCCATTTCAGGCGGCCGGAACCTGCa                                                                                                                                   >  2:348115/1‑289 (MQ=255)
                                                                                                                                                      ttCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCa                                                                                                                                   >  2:130190/1‑289 (MQ=255)
                                                                                                                                                         gCCCGTTGTGTTTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTTGTCCGGGCCATAGCGCAGCACGCAGAGTCTAACCATTTAATCTGGCAGATGCTCCGCGTACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCCACCCGTCTAGCCAATATGTTCATCAATTAAGCCAGTCACTATTGCTTAGCCGCATCAGACGCCCGCTCCTCCATTACGAGGCAACATTACACCGCGCCTTGCATGCGCCAGAGAACATCAACt                                                                                                                                >  2:428958/1‑289 (MQ=255)
                                                                                                                                                         gCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGTCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCa                                                                                                                                   >  1:1870837/1‑286 (MQ=255)
                                                                                                                                                         gCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCCGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCaatg                                                                                                                                >  1:288705/1‑287 (MQ=255)
                                                                                                                                                              ttGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGgcg                                                                                                                            <  2:1866996/288‑1 (MQ=255)
                                                                                                                                                                  gATTGTATTGGAGCCACACTTTTCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCG‑CTgg                                                                                                                       <  1:562385/288‑1 (MQ=255)
                                                                                                                                                                         ttGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCG‑CTGGgtgagtga                                                                                                               <  1:1618866/289‑1 (MQ=255)
                                                                                                                                                                           gAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGTAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCG‑CTGGgt                                                                                                                     >  2:245595/1‑281 (MQ=255)
                                                                                                                                                                              ggCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCTAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCCCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCCACTGGCG‑CCGGGTGAGTGaaccc                                                                                                           >  2:879488/1‑285 (MQ=255)
                                                                                                                                                                               gCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCG‑CTGGGTGAGTGaatcgc                                                                                                          <  2:1064691/288‑5 (MQ=255)
                                                                                                                                                                                 acacTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCCTTACGAGGCAGCATTCAACCGCGCCTTGCAGGCGGCAGAGACCTGCAACTGGCG‑CGGGgggagggcatcgctac                                                                                                       >  2:1196417/1‑278 (MQ=255)
                                                                                                                                                                                     tttGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCgt                                                                                                                                                                                                                                                     <  2:1167032/144‑1 (MQ=255)
                                                                                                                                                                                      ttGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAat                                                                                                                                                                                                                                            >  1:1610023/1‑152 (MQ=255)
                                                                                                                                                                                      ttGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAat                                                                                                                                                                                                                                            <  2:1610023/152‑1 (MQ=255)
                                                                                                                                                                                      ttGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCG‑CTGGGTGAGTGAATCGCTACGGCa                                                                                                   >  1:1650032/1‑288 (MQ=255)
                                                                                                                                                                                         cGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCa                                                                                                                                                                                                                                     >  2:757745/1‑156 (MQ=255)
                                                                                                                                                                                             cATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCCTTACGAGGCAGCATTCAACCGCGCATTGCCGGCGGCAGAGACCTTCAACTGGCGCCTGGGT‑AGTGAATCGCTACGGCCAcctgcc                                                                                            >  2:833576/1‑283 (MQ=255)
                                                                                                                                                                                               tGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAgg                                                                                                                                                                          >  1:1829945/1‑209 (MQ=255)
                                                                                                                                                                                               tGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCG‑CTGGGTGAGTGAATCGCTACGGCAACTgcgcgc                                                                                          >  1:2132688/1‑288 (MQ=255)
                                                                                                                                                                                                gTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCG‑CTGGGTGAGTGAATCGCTACGGCAACTGCGCGC‑Ca                                                                                       <  1:1461179/289‑1 (MQ=255)
                                                                                                                                                                                                  cGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCa                                                                                                                                             <  1:1738713/235‑1 (MQ=255)
                                                                                                                                                                                                      cTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCG‑CTGGGTGAGTGAATCGCTACGGCAACTGCGCGC‑CAGCGTTg                                                                                 <  1:1121283/289‑1 (MQ=255)
                                                                                                                                                                                                          cGGTACGGGCCTTCGTCGAGACCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTAGCAGATGCGCAGCGAACACG‑TCACAACATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCG‑CTGGGTGAGTGAATCGCTACGGCAACTGCGCGC‑CAGCGTTGATg                                                                              <  1:1811103/288‑1 (MQ=255)
                                                                                                                                                                                                          cGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCG‑CTGGGTGAGTGAATCGCTACGGCAACTGCGCGC‑CAGCGTTGATg                                                                              <  1:1156669/288‑1 (MQ=255)
                                                                                                                                                                                                          cGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCG‑CTGGGTGAGTGAATCGCTACGGCAACTGCGCGC‑CAGCGTTGATg                                                                              <  1:309612/288‑1 (MQ=255)
                                                                                                                                                                                                            gTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCCCATCCATTACGAGGCAGCATTCAACCGCGCCTTGCAGGCCGCAGAGACCTGCa                                                                                                                                   >  2:1738713/1‑235 (MQ=255)
                                                                                                                                                                                                                  gCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATcagccagc                                                                                                                                                                                            <  1:1197899/172‑1 (MQ=255)
                                                                                                                                                                                                                  gCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCCGCAGAGACCTGCAACCGGCG‑CTGGGTGAGTGAATCGCTACGGCCACTGCGCGC‑CAGCGGTGCTGCCTTCCAc                                                                      >  2:1110409/1‑288 (MQ=255)
                                                                                                                                                                                                                    cTTCGTAGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTCTGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCG‑CTGGGTGAGTGAATCGCTACGGCAACTGCGCGC‑CAGCGTTGATGCCTTCCACGcc                                                                   <  1:1034777/289‑1 (MQ=255)
                                                                                                                                                                                                                       cgtcgAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCgt                                                                                                                                                                                                                                                     <  2:1940352/110‑1 (MQ=255)
                                                                                                                                                                                                                       cgtcgAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCG‑CTGGGTGAGTGAATCGCTACGGCAACTGCGCGC‑CAGCGTTGATGCCTTCCACGCCcgc                                                                >  1:2239063/1‑289 (MQ=255)
                                                                                                                                                                                                                        gtcgAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCG‑CTGGGTGAGTGAATCGCTACGGCAACTGCGCGC‑CAGCGTTGATGCCTTCCACGCCcgcg                                                               <  2:1773433/289‑1 (MQ=255)
                                                                                                                                                                                                                        gtcgAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCG‑CTGGGTGAGTGAATCGCTACGGCAACTGCGCGC‑CAGCGTTGATGCCTTCCACGCCcgcg                                                               <  1:130190/289‑1 (MQ=255)
                                                                                                                                                                                                                         cgggggcgcaaaggcaacaAGCAAAATTTAACCATTTAACCTGGGAGATGCGCAG‑GCAAACGATCCCATCATCTGACGATCGGTTGGCCAGCGAAGAAGGAAAAGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCG‑CTGGGTGAGTGAATCGCTACGGCAACTGCGCGC‑CAGCGTTGATGCCTTCCACGCCcgcg                                                               <  2:1807833/275‑1 (MQ=255)
                                                                                                                                                                                                                            aGGCCAAAGCGCAGCAAGCAGAATCTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGTCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCG‑CTGGGTGGGTGAATCGCTAAGGCAACTGGCGGG‑CAGCGTTGATGCCGTCCACGCCCGCgcca                                                            >  1:2020755/1‑288 (MQ=255)
                                                                                                                                                                                                                              gCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCG‑CTGGGTGAGTGAATCGCTACGGCAACTGCGCGC‑CAGCGTTGATGCCTTCCACGCCCGCgccagc                                                          >  1:1169196/1‑288 (MQ=255)
                                                                                                                                                                                                                              gCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCG‑CTGGGTGAGTGAATCGCTACGGCAACTGCGCGC‑CAGCGTTGATGCCTTCCACGCCCGCgccagc                                                          <  2:1415535/288‑1 (MQ=255)
                                                                                                                                                                                                                                      gcagcaAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCG‑CTGGGTGAGTGAATCGCTACGGCAACTGCGCGC‑CAGCGTTGATGCCTTCCACGCCCGCGCCAGCCACtata                                                   <  2:936609/287‑1 (MQ=255)
                                                                                                                                                                                                                                              caGAATTTGACCAATTATTCTGGCGGAGTCACAGAGAGCACG‑TCACATCACTGGACGATCCGTTTGCCAGAGAAGAAGGCAACGCGTGTCGACAATATGTTCAGCGATTAAGCCAGACATTATGGCTGGGCGGCATCAGCCGGCCACTCATCGATTACGAGGCAGCAGTCAACCGCGCATTGCAGGCGGCAGAGACGTGCAACTGGGG‑CTGGGTGAGTGAATCGCGGCGGCAACTGCGCGC‑CAGCGTTGATGCGTTCCACGCCCGCGCCAGCCACTATAATGCCGgaga                                         <  2:1389871/289‑1 (MQ=255)
                                                                                                                                                                                                                                               aGAATTTAACCATTTAATCCGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACCCGTGCCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCCCGGCGGCATCAGCCAGCCGCTCATCCATTCCGAAGCAGCAGTCCATCGCGCTTTGCATGCGGCAGAAACCTGAAACAGCTG‑CGGGGGGCGTGGATGGCTACGGCAACT‑CCCGCACTGCGCTGGTCCACACCACGACCGTCCCAGCCACGTTAACGCCGgagcg                                        >  2:364129/1‑287 (MQ=255)
                                                                                                                                                                                                                                                 aaTTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCAt                                                                                                                                                                                                    >  1:1510041/1‑133 (MQ=255)
                                                                                                                                                                                                                                                  aTTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCTAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCG‑CTGGGTGAGTGAATCGCTACGGCAACTGCGCGC‑CAGCGTTGATGCCTTCCACGCCCGCGCCAGCCACTATAATGCCGGAGAAt                                       <  1:879488/287‑1 (MQ=255)
                                                                                                                                                                                                                                                  aTTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCG‑CTGGGTGAGTGAATCGCTACGGCAACTGCGCGC‑CAGCGTTGATGCCTTCCACGCCCGCgcc                                                             <  2:1628540/265‑1 (MQ=255)
                                                                                                                                                                                                                                                               aTCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGCCGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCG‑CTGGGTGAGTGAATCGCTACGGCAACTGCGCGC‑CAGCGTTGATGCCTTCCACGCCCGCGCCAGCCACTATAATGCCGGAGAATGCTTACATCAGCTTg                        <  1:1559875/289‑1 (MQ=255)
                                                                                                                                                                                                                                                               aTCTGGCAGATGCGCAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCG‑CTGGGTGAGTGAATCGCTACGGCAACTGCGCGC‑CAGCGTTGATGCCTTCCACGCCCGCGCCAGCCACTATAATGCCGGAGAATGCTTACATCAGCTTg                        <  1:634223/289‑1 (MQ=255)
                                                                                                                                                                                                                                                               aTCTGGACGATGCGGAGCGAACACG‑GCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACTCGTGTCGGCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCG‑CTGGGTGAGTGACTCGCTACGGCAACTGCGCGC‑CAGCGTTGATGCCTTCCACGCCCGCGCCAGCCACTATAATGCCGGAGAATGCTTACATCAGCTTg                        <  2:1745845/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                          gcgcAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCG‑CTGGGTGAGTGAATCGCTACGGCAAATGCGCGC‑CCGCGTTGATGCCTTCCCCCCCCGCGCCAGCCACCATAATGCCGGAGAAGGCTTTCATCCGCTGTGGGCATTAAAc             >  2:1092799/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                            gcAGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCG‑CTGGGTGAGTGAATCGCTACGGCAACTGCGCGC‑CAGCGTTGATGCCTTCCACGCCCGCGCCAGCCACTATAATGCCGGAGAATGCTTACATCAGCTTGCGGCATTAAACa            <  1:871050/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                              aGCGAACACG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCG‑CTGGGTGAGTGAATCGCTACGGCAACTGCGCGC‑CAGCGTTGATGCCTTCCACGCCCGCGCCAGCCACTATAATGCCGGAGAATGCTTACATCAGCTTGCGGCATTAAACAGTc         >  2:185450/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                     acG‑TCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCG‑CTGGGTGAGTGAATCGCTACGGCAACTGCGCGC‑CAGCGTTGATGCCTTCCACGCCCGCGCCAGCCACTATAATGCCGGAGAATGCTTACATCAGCTTGCGGCATTAAACAGTCGATTaaa  <  1:497480/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                              |||                                                                                                                                                                                                                                                                                        
CTGGCTACCCTTCCCGATGCTACCCGCAAACGCGCACAGGCGCTGGTCGCTAAAGGCATCACCATTGAGTTGTTCTGTGCGCCGGGTGAAATTCCCTCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACG‑TCACAAGTTCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCG‑CTGGGTGAGTGAAAGCCTACGGCAACTGCGCGC‑CAGCGTTGATGCCTTCCACGCCCGCGCCAGCCACTATAATGCCGGAGAATGCTTACATCAGCTTGCGGCATTAAACAGTCGATTAAA  >  CP042583/1784347‑1784912

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A