Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A0 F0 I1 R1
|
4926 |
296.4 |
4517418 |
96.8% |
4372860 |
264.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,797,348 |
3 bp→TCG |
intergenic (–/–) |
– / – |
–/– |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,797,348 | 0 | A | T | 95.1%
| 561.0
/ NA
| 264 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (12/1); new base T (95/155); total (108/156) |
| Fisher's exact test for biased strand distribution p-value = 1.18e-04 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,797,349 | 0 | G | C | 99.2%
| 597.9
/ NA
| 264 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (2/0); new base C (104/156); total (108/156) |
| Fisher's exact test for biased strand distribution p-value = 1.63e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,797,350 | 0 | C | G | 97.3%
| 586.2
/ NA
| 265 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (7/0); new base G (101/155); total (108/157) |
| Fisher's exact test for biased strand distribution p-value = 1.75e-03 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 266 total aligned reads displayed.
TGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTAGTCACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCAGTCTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAA‑GCACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATAGCCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGCACAGTGTGATTGGAAGTAGCTGTATAGGCGCAAGCGTCATCGGCGGTATTTGTAACAACTCCGGCGGCAGCCTGGTGCAACGTGGCCCGGCGTATACCGAAATGAGCTTATTCGCGCGTA > CP042583/1797062‑1797630
||||
tttttCGCCACCACAAGGAGTGGAAAATGGCTTCCATGACAACAACTGTTAATCAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACTGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCaaa < 2:862973/289‑1 (MQ=255)
cGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTa < 2:1517087/289‑1 (MQ=255)
cGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTa < 1:343036/289‑1 (MQ=255)
cGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTa < 2:519318/289‑1 (MQ=255)
gcaacacaaaGGAGGCGCAAATGTATTCCTTTACAAAAACTTATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCAAACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTa < 2:1327243/280‑1 (MQ=255)
gTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATcg < 1:1852258/288‑1 (MQ=255)
aaaaTGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCCGAAAGCCTTC‑GTCCCCGCCGACAAAATTATTCTTATGCAGGCCGCCCATACAGGCCTGACCGAAGGAA‑CCACCGCCAACGGGAACGATTATGAtaccgagg > 2:2052833/1‑282 (MQ=255)
aaaTGTCTTCCATGACACCAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATg < 1:875514/288‑1 (MQ=255)
cTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGTGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTat < 1:1004190/289‑1 (MQ=255)
aTGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATg < 1:513471/277‑1 (MQ=255)
tgcaaacaacTGATAATAACGCCTTTTTTAATGAACTTGCTCGTCTGGTGGGTTCTTCACCCCTGCTCCCCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑Ag < 2:1898061/285‑1 (MQ=255)
gcccagcaaggagaatacAGCCTATTGGAATGACCTTCCTCGTCTGGTGGGTCCGTCACACCTGCTCAACGATCCCGCAGAAACGGCCCGCGATCGCAAGGGCTTCCGTTCTGGTCAGGGAGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGc < 2:1564518/276‑1 (MQ=255)
cTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGGCTTC‑GTCCCCGCCGACAAAAATATTTTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAATGGCCGCAAAACGG‑AACGAATATGATCTCGATGTCGGTatcaa > 2:513471/1‑276 (MQ=255)
aataaAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCg < 1:953580/289‑1 (MQ=255)
aataaAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCCACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGAGCGGAGGAA‑TGACGCCCAACGGTTACGAATATGATCGCAGGGGCGTTATCATC‑AGCACCCTGcctttg > 1:769969/1‑283 (MQ=255)
aataaAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACCAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCCAAGGAT‑CGACGCCAAACGGGAACGATTAGGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCg > 1:1734804/1‑289 (MQ=255)
aaaGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGGAAGCCTGC‑GGCACCGCCGCCCAAATTATTCTGATGCAGGGCGCCAAAAAAGGACTGGCCGAAGGAT‑CCACGCCAAAAGGTAGAGATTATGAACGCGCTGGCGTTTACACT‑AGCCCCCTTCGTCCCGACa > 2:1150455/1‑289 (MQ=255)
aGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTTC‑GTCACCGCCGACAAAAATATTCTGATGCAGGCCGCCAATACCAGCCTGACCCAAGGAT‑CGACGCCCAACGGTAACGCATATCATAGCCGTGTCTGTCTCATT‑AGCCCCCCGCGTCCCGaaaa > 2:1643118/1‑288 (MQ=255)
cTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGCGGTCA‑CGCCCACAAAATTATTCTTATTCAGGGCGCCAAAACAGGCCCGACCGAAGGGT‑CCACGCCAAAACGTAACGAATAAGAATGCCATGTCGTGTTCATC‑ATCACCCCGCGtctcccccaactt > 2:2226550/1‑280 (MQ=255)
ttttGAATGACCTTGTCCGTCTGGTGGGTTCTTGCCCCCGGCTCACCGATCCCGCAAAACCGGCCCGCTATCGCAAGGGCTTCCGTTCTGTTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCa < 2:1885266/289‑1 (MQ=255)
ttttGAATGAACTTCCTCGTCTGGTGGGTTCTTCACCCCTGCTCCCCCATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCa < 1:542705/289‑1 (MQ=255)
tttgGAATGAACCTGGCCGTCTCGTGTGTTCTTCACACCTGCTCACCGATCCCGCAAAAGCGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCa < 2:206302/289‑1 (MQ=255)
aCTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGc < 1:2226550/289‑1 (MQ=255)
cTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTAAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCa < 2:2182869/289‑1 (MQ=255)
gCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAgg < 2:210986/289‑1 (MQ=255)
tCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAggg < 1:1921106/288‑1 (MQ=255)
tCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAggg < 1:416009/288‑1 (MQ=255)
cTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAAc < 1:516780/289‑1 (MQ=255)
gggTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGGCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTg < 1:1042316/289‑1 (MQ=255)
ggttcttcacACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTg < 1:2211182/279‑1 (MQ=255)
tcttcacACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTgg < 1:2052833/283‑1 (MQ=255)
cttcacACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGGGCTgg > 1:1183969/6‑288 (MQ=255)
cttcacACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCCCCGACAAAATTATTTTGATGGAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACTCCAAAAGGTAAAGAATATGATCGCGAAGGCGTGATTCTCAACCACCCTGCCTCCGGAC‑AGCTACCACTCCTTTGGAATGGCGAACAGGGGCggg > 2:1032984/6‑288 (MQ=255)
ttcacACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGcc < 2:73532/285‑1 (MQ=255)
acatGCTCACCGCTCCCGCAGAATCGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATcc < 2:711710/286‑1 (MQ=255)
aCCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATcc < 1:1822052/289‑1 (MQ=255)
aCCCGCTCACCCACCCCGCAACAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGGCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCATGC‑GTCTCCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATcc < 2:920737/289‑1 (MQ=255)
cTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAA‑CGACGCCAAACGGTAAAGATTATGATCGCGATGTCGTTATAATC‑AGCACCCTGCGTCTCGAGCAACTGCAAGTTCTTGGCAAGGGCGAACAGGGGCTGGACTATCCgg > 1:2136670/1‑289 (MQ=255)
cTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCCCCGCCGACAAAATTATTCTTATGCAGGCCGCCAAAACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGCTTTCGTTATCATC‑AGCACCCTTCGTCCCGACAAGCCGCCCGTTCTTGGCAAGGGGGAACACGGGCTGGccctacccggc > 2:960603/1‑279 (MQ=255)
cTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGt > 1:732534/1‑192 (MQ=255)
cTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGc > 1:1051957/1‑288 (MQ=255)
cACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGcacc < 1:1581632/289‑1 (MQ=255)
cACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGcacc < 1:1880136/289‑1 (MQ=255)
cccGGTCCCGCAAAAACGACCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGcacca < 1:1552134/288‑1 (MQ=255)
cGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCCCCGCCGACAAAATTTTTTTGATGCAGGCCGCCAATACAGGCCCGACCGAAGGAT‑CCACGCCAAACGGCAACGATTATGATCGCCATGTCGTGTTCATC‑AGCACCCCGCGGCTCGACAAGCTTCCACTTCCTGGCCAGGCCGAACCAGTGCTGGCCTATCCcgggcccccg > 2:1737452/1‑282 (MQ=255)
cGACCCCGCAAACAGGGCCCGGTATCTGAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGTCTGTCGTTTTCCCTGGCTCACTTCTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑TCCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCAAC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACg < 2:1183481/289‑1 (MQ=255)
aTCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGAAGTCGTTATCATC‑AGCACCCTGCGGCCCGCCAAGCCGCACGGTCTTGGCAAGGGCGAAAAGGTGCTGGCCTATCCGGGCACCACGc > 1:1094285/1‑288 (MQ=255)
tCCCGGAGAAACGGCCCGCTATCGGAAGGGCTTCCGTTCTGGTCAGGGGGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGct < 2:1222118/288‑1 (MQ=255)
cccGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCCCCAATACAGGCCTGACCGAAGGAA‑CGACGCCAAACCGTAACGATTATTATCGCGGTGTCGTTATCATC‑AGCACCCTGCGtct > 2:1594902/1‑214 (MQ=255)
ccGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGaaaa < 1:50109/288‑1 (MQ=255)
cGCAAGGGCGTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCa < 2:47178/289‑1 (MQ=255)
aaGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCaaa < 1:166097/288‑1 (MQ=255)
ggCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGcacc < 1:1435079/255‑1 (MQ=255)
ttCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGGTCTTGGCAAGGGCGAACAGGGGGTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTgg > 1:1027060/1‑289 (MQ=255)
ttCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAACACAGGCCTGGCCGAAGGAT‑CGACCCCCAACGGTAACGAATATGATCGCGATGTCGTTATCATC‑AGCACCCTCGGTCCCGACAAGCCGCACCGTCTTTGCACGGGCGAAACGGGGCCGGCCTCTCCGGGCCCCCACCCCTATTCGCTGGAAAAAGGCCCCAAA‑CCCCTgg > 2:806567/1‑289 (MQ=255)
ccGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCCATTCCCTGGAAAAAGCCCCCAAA‑CCGCCggg > 1:990290/1‑288 (MQ=255)
gTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAAc < 2:500824/288‑1 (MQ=255)
ggCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGaaaa > 1:23281/1‑257 (MQ=255)
ggCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGaaaa < 2:23281/257‑1 (MQ=255)
gCGACGCGCTTGCGGTCGTTTTCCCGCGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGcact < 2:18404/288‑2 (MQ=255)
gCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGcact < 1:806567/288‑2 (MQ=255)
cgcgCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACCAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCCACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGTCTATCCGGGCACCCCGCTCTCTTCGCTGGAAAAAGCCCTCAAA‑CCCCCGGGACGCCAAccaccccccagg > 2:593982/1‑279 (MQ=255)
cgcgCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACCCCCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCCGGGACGCGAACCGcccccagtg > 1:696850/1‑281 (MQ=255)
cgcgCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAACTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGcactccgtg > 1:1946211/1‑283 (MQ=255)
gctggctgTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGCACTCAGTGAtt < 1:1150455/289‑1 (MQ=255)
tggctgTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAAGAT‑CGACGCCAAACGGTAACGATTATGATCCCGATGTTGTTTTCAAC‑CGCACCCTGCGGCTTGACCAGGCTCCCGGTCTTGGCCAGGGGGGAACGGGGCTGGCCTTTTCGGGCGCCACGCCCATTTTCGGGGGAAAAGCACTCAAACCCCCTGGGGGGCGACCCGcaccacggcgtga > 2:415319/1‑279 (MQ=255)
ggctgTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGCACTCAGTGATTGGa < 2:344321/289‑1 (MQ=255)
gctgTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGCACTCAGTGATTGGa < 2:1393856/288‑1 (MQ=255)
tgTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCGAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGCACTCAGTGATTGGatca < 2:278228/289‑4 (MQ=255)
ttttCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGCACTCAGTGATTGGatca < 1:1604439/284‑4 (MQ=255)
tCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGCACTCAGTGATTGGatca < 1:1481683/281‑4 (MQ=255)
tggctcactactaGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGCACTCAGTGATTGGatca > 1:1758036/8‑274 (MQ=255)
tggctcactactaGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGCACTCAGTGATTGGatca < 2:1758036/270‑4 (MQ=255)
ctactaGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCTGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGCACTCAGTTGTTGGATCAACGTGTATAGGCGCatcgg > 1:499273/1‑285 (MQ=255)
actaGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCatcggtc < 2:1051957/289‑7 (MQ=255)
ttGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATcggcg < 1:1206817/289‑1 (MQ=255)
gtgGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGt > 1:1268205/1‑94 (MQ=255)
gtgGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGt < 2:1268205/94‑1 (MQ=255)
gtgGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGAc > 1:1351374/1‑233 (MQ=255)
gtgGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCAAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGcact < 2:2169734/245‑2 (MQ=255)
cTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTATTTGTaac < 1:1366746/288‑1 (MQ=255)
ccTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCg > 1:1690049/1‑224 (MQ=255)
cTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGCACTAAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGGATTTGTAAACACTCcggc > 2:329472/1‑289 (MQ=255)
c‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCcggcgg > 1:486343/1‑288 (MQ=255)
gTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCggcggct < 1:2158342/289‑2 (MQ=255)
aaaaTTATTCTGATGCAGGCCGCCAATACACGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAAc < 1:932619/289‑1 (MQ=255)
tattCTGTGGAAGGCAGCAAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGTTGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGc < 2:1947926/289‑1 (MQ=255)
aTGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAAc > 1:2172515/1‑124 (MQ=255)
aTGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGcact < 2:305793/199‑2 (MQ=255)
aTGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGcact > 1:305793/1‑198 (MQ=255)
aTGCAGGCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGAGGCTCGCTGGTGCAACGCGGCGCGGCGt > 2:1492333/1‑289 (MQ=255)
ggCCGCCAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATAc > 2:525220/1‑288 (MQ=255)
cgccAATACAGGCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGaa > 1:615524/1‑289 (MQ=255)
ggCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGc > 2:1066108/1‑264 (MQ=255)
gCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCggcggctcgc > 1:279656/1‑245 (MQ=255)
gCCTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATgtcgttat > 1:1132601/1‑281 (MQ=255)
ccTGACCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATgtcggtattc > 1:1443901/1‑280 (MQ=255)
aCCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGGTATTcgcgc > 1:1109249/1‑289 (MQ=255)
aCCGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTA‑CATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGcact > 1:413006/1‑173 (MQ=255)
ccGAAGGAT‑CGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTcgcgcg > 2:1685000/1‑289 (MQ=255)
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TGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTAGTCACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCAGTCTACTAGAATTGTGGCGGGTGCTGAAAGCCTGC‑GTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAA‑GCACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATC‑AGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATAGCCTGGAAAAAGCCCTCAAA‑CCGCTGGGACGCGAACCGCACAGTGTGATTGGAAGTAGCTGTATAGGCGCAAGCGTCATCGGCGGTATTTGTAACAACTCCGGCGGCAGCCTGGTGCAACGTGGCCCGGCGTATACCGAAATGAGCTTATTCGCGCGTA > CP042583/1797062‑1797630
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A