Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,800,237 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,800,2370AT99.5% 473.0 / NA 203intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (114/87);  minor base C (1/0);  total (115/88)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,800,2380CG99.5% 464.7 / NA 197intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (113/83);  minor base T (1/0);  total (114/83)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,800,2390TA99.0% 465.2 / NA 197intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (113/82);  minor base C (1/1);  total (114/83)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 203 total aligned reads displayed.

AGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTGCTACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGACTCGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCAAAACGT‑GGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGA  >  CP042583/1799957‑1800518
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                        
aGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTgacggacg                                                                                                                                                                                                                                                                                    <  2:1482872/289‑1 (MQ=255)
       aCGATAACCGTAGCCCCATGGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAATTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGAGCAAACGAAGGACGCTGCggg                                                                                                                                                                                                                                                                             >  2:1470728/1‑288 (MQ=255)
               cGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTAcg                                                                                                                                                                                                                                                                     <  1:836970/289‑1 (MQ=255)
                  aGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTAcg                                                                                                                                                                                                                                                                     <  2:342718/286‑1 (MQ=255)
                     cccATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGcc                                                                                                                                                                                                                                                                 <  2:307595/287‑1 (MQ=255)
                        aTAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATcca                                                                                                                                                                                                                                                            <  2:1510846/289‑1 (MQ=255)
                              taACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCAGccacca                                                                                                                                                                                                                                                         >  2:319124/1‑286 (MQ=255)
                                 cGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGa                                                                                                                                                                                                                                                    >  1:857597/1‑288 (MQ=255)
                                  ggTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGAcc                                                                                                                                                                                                                                                  <  1:1105261/289‑1 (MQ=255)
                                  ggTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGAcc                                                                                                                                                                                                                                                  <  1:2147681/289‑1 (MQ=255)
                                      aGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTgacggacg                                                                                                                                                                                                                                                                                    >  2:1788447/1‑251 (MQ=255)
                                      aGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATCATTCCGCGCCACCCACCAGACGAccccc                                                                                                                                                                                                                                               >  2:250783/1‑286 (MQ=255)
                                      aGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGc                                                                                                                                                                                                                                               >  1:51901/1‑288 (MQ=255)
                                      aGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGc                                                                                                                                                                                                                                               >  1:2232302/1‑288 (MQ=255)
                                      aGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGc                                                                                                                                                                                                                                               >  1:2171225/1‑288 (MQ=255)
                                            agcagcACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATc                                                                                                                                                                                                                                         >  2:1567112/1‑288 (MQ=255)
                                                       cAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCcca                                                                                                                                                                                                                             <  1:813167/289‑1 (MQ=255)
                                                              aGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCa                                                                                                                                                                                                                      >  1:1809505/1‑289 (MQ=255)
                                                              aGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACACGATGACCCACCCCATAACCGCGAACCcagccagcc                                                                                                                                                                                                                      >  2:1033189/1‑288 (MQ=255)
                                                                cACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAACACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCAAACACCAGAATACCCGCCCCATCAACGCCACCCCAGCCAGCaga                                                                                                                                                                                                                    >  2:1106143/1‑287 (MQ=255)
                                                                cACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCCACATa                                                                                                                                                                                                                    >  1:1325597/1‑289 (MQ=255)
                                                                 aCGCCAATCGCCAGCGTCGAAATAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATaa                                                                                                                                                                                                                   <  1:2019379/289‑1 (MQ=255)
                                                                      aaTCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCg                                                                                                                                                                                                              <  1:652984/289‑1 (MQ=255)
                                                                                               cTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCt                                                                                                                                                                                                                                                                                  >  1:495158/1‑196 (MQ=255)
                                                                                               cTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCTCCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACACCCAGCGCCAGt                                                                                                                                                                                      >  1:912384/1‑288 (MQ=255)
                                                                                               cTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTaaa                                                                                                                                                                                                          >  1:325021/1‑268 (MQ=255)
                                                                                                  aGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CAATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCgg                                                                                                                                                                                  <  1:1785093/289‑1 (MQ=255)
                                                                                                      cTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTAcg                                                                                                                                                                                                                                                                     >  2:3536/1‑202 (MQ=255)
                                                                                                        tCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCCGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGCCCGGTaaaa                                                                                                                                                                             >  2:1339727/1‑287 (MQ=255)
                                                                                                        tCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCACCCCCCGTCCGGTAAAcc                                                                                                                                                                            >  2:2188596/1‑289 (MQ=255)
                                                                                                        tCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCACCACCGCGACCCCCGCCAGCATAACGCCGTAAAACAAGACAACACGCGCCAGGCCGGCAAAcc                                                                                                                                                                            >  2:1964368/1‑289 (MQ=255)
                                                                                                         ccTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGCCCGCTTAAAAACAGCGGCGTTGCAACGTAGCCCGCGCAGA‑CCATGCAGTGCGCAAGTGACGGACGCTCCGGATAATTACACGCCATCCACCAGATGACCCGCACCACCCACGCGACCCCAGCCAGAATAAAGCCCGAAAACAAAAAAGACCACGGCACTCCGGTTAACCa                                                                                                                                                                           >  2:723102/1‑289 (MQ=255)
                                                                                                         ccTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCccagc                                                                                                                                                                                                                           <  2:1117838/241‑1 (MQ=255)
                                                                                                           tctTTTTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCGGGTGTAAAACAGCGCCACCGTGCCGAACAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAgg                                                                                                                                                                         <  2:878384/289‑1 (MQ=255)
                                                                                                             tttGTTGATATTCGAGAAACTCGGAATACCAAAGAAAAGCGGGCGGCCGGTGTAAAACAGCCCCACCGTCCCAACCAGCACACACAACCAAACCCGTGGGTAAAGCGCTACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTTGCCCGCGAAGA‑CCATGCAGTCCACAAGTGACGGACGCTGCGGATAATTGCGCGCCATCCACCAGATGACACGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGAt                                                                                                                                                                       <  2:1325597/289‑1 (MQ=255)
                                                                                                             tttGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGAt                                                                                                                                                                       <  2:2232302/289‑1 (MQ=255)
                                                                                                             tttGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGAt                                                                                                                                                                       <  1:1471371/289‑1 (MQ=255)
                                                                                                             tttGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGAt                                                                                                                                                                       <  1:2188596/289‑1 (MQ=255)
                                                                                                             tttGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGAt                                                                                                                                                                       <  1:1539157/289‑1 (MQ=255)
                                                                                                             ttagttgATAGTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGGAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGAACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGAt                                                                                                                                                                       <  2:783102/286‑1 (MQ=255)
                                                                                                                    atatTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCa                                                                                                                                                                >  1:581153/1‑289 (MQ=255)
                                                                                                                      atTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGAt                                                                                                                                                                       <  2:430257/280‑1 (MQ=255)
                                                                                                                            gAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAAAAAGCAAGCCAGCCCCAGTCCGGTAAACCAGGATAACTTCAGGagagg                                                                                                                                                         >  2:651699/1‑287 (MQ=255)
                                                                                                                                 tCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATc                                                                                                                                                   >  1:701708/1‑289 (MQ=255)
                                                                                                                                         ccAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGGGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAAt                                                                                                                                           <  2:1621456/289‑1 (MQ=255)
                                                                                                                                          cAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGAcc                                                                                                                                                                                                                                >  1:2201127/1‑203 (MQ=255)
                                                                                                                                               tAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAg                                                                                                                                      <  1:1339727/288‑1 (MQ=255)
                                                                                                                                                  aGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCaa                                                                                                                                  <  1:1753143/289‑1 (MQ=255)
                                                                                                                                                   cagggTAGCCGGTGGAAAACAGGGCCACCGGGCCGACCAGCGCACACAACCAGACCAGGGGATAAAGCGCCACAAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAAt                                                                                                                                 <  2:2116739/286‑1 (MQ=255)
                                                                                                                                                    cAGGGAGCCGGTGTAAAACAGCGCAACCGGGCCGACCAGCGCACACAACCAGAACAGTGGATAAAGCGCCACAAGACCGCTTAAAAACAGCGGGGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAAt                                                                                                                                 <  2:2171225/288‑1 (MQ=255)
                                                                                                                                                       gTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTACAAACAGCGGAGTTGCCACGTAGCACGCGAAGA‑CCATGCAGGGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGGAAAACAAGACAGCCAGCGCCAGTCCAGTAAACCAGGAAAACTTCACGATATTGCTAACGCCAACATCCCAccccaccggt                                                                                                                             >  2:1768366/1‑282 (MQ=255)
                                                                                                                                                       gTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCtgt                                                                                                                             >  2:1523549/1‑289 (MQ=255)
                                                                                                                                                              gtgtAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAg                                                                                                                                      <  1:283635/273‑1 (MQ=255)
                                                                                                                                                                 tAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTg                                                                                                                       >  1:2116739/1‑285 (MQ=255)
                                                                                                                                                                              ccGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGAGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGa                                                                                                                >  1:1271044/1‑279 (MQ=255)
                                                                                                                                                                                   ccGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCg                                                                                                 >  2:104394/1‑289 (MQ=255)
                                                                                                                                                                                   ccGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGAACCCACCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATTAATTCAGGAAAGTGACATACACAAAATTCCCGCCACTTAGTGGAGTACCAAGTAAGACGCaaacacacg                                                                                                 >  2:174065/1‑283 (MQ=255)
                                                                                                                                                                                                       gaccagTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCaaa                                                                             >  1:714690/1‑289 (MQ=255)
                                                                                                                                                                                                            gTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCGGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCAAAACgt‑g                                                                       >  1:1611319/1‑289 (MQ=255)
                                                                                                                                                                                                            gTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCAAAACgt‑g                                                                       >  2:1672992/1‑289 (MQ=255)
                                                                                                                                                                                                            gTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCAAAACgt‑g                                                                       >  1:230234/1‑289 (MQ=255)
                                                                                                                                                                                                            gTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCAAAACgt‑g                                                                       >  2:1401359/1‑289 (MQ=255)
                                                                                                                                                                                                               ggtAAATCGACACCCTACCGCTTAAAAACAGCGGGGTTGCAACTTGGCCCGCGAAGA‑CCATGCAGAGCGCCAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCAAAACgt‑ggt                                                                     <  2:1996537/286‑1 (MQ=255)
                                                                                                                                                                                                                      cgcCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCAAAACGT‑GGTGGGTGTaa                                                             >  1:2013808/1‑289 (MQ=255)
                                                                                                                                                                                                                       gcCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCAAAACGT‑GGTGGGTGTaa                                                             <  1:521322/288‑1 (MQ=255)
                                                                                                                                                                                                                         caccaGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAg                                                                                                                                      <  2:145218/214‑1 (MQ=255)
                                                                                                                                                                                                                         caccaGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAg                                                                                                                                      >  1:145218/1‑214 (MQ=255)
                                                                                                                                                                                                                         caccaGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCAAAACGT‑GGTGGGTGTAATgg                                                          >  2:1417572/1‑289 (MQ=255)
                                                                                                                                                                                                                         caccaGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACAAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCAAAACGT‑GGTGGGTGTAATgg                                                          >  2:576896/1‑289 (MQ=255)
                                                                                                                                                                                                                          accaGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCAAAACGT‑GGTGGGTGTAATGGt                                                         >  1:1519769/1‑289 (MQ=255)
                                                                                                                                                                                                                          accaAACCGCTCAAAACCAGCGGGCTTGCAACGTAGACCACGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGCTAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCAAAACGT‑GGTGGGTGTAATGGt                                                         <  2:1516757/289‑1 (MQ=255)
                                                                                                                                                                                                                               aCCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAAt                                                                                                                                 <  1:1137041/213‑1 (MQ=255)
                                                                                                                                                                                                                                   cTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGC‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAAGCGACGCCATCAGCAAAACGT‑GGTGGGAGTAATGGTGAGAAAtcg                                                >  1:116430/1‑289 (MQ=255)
                                                                                                                                                                                                                                   cTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAACATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCAAAACGT‑GGTGGGTGGAATGGTGAGAAAtcg                                                >  1:2218460/1‑289 (MQ=255)
                                                                                                                                                                                                                                   cTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCAACACGT‑GGTGGGTGTAATGGTGAGAAAtcg                                                >  1:1516757/1‑289 (MQ=255)
                                                                                                                                                                                                                                   cTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCAAAACGT‑GGTGGGTGTAATGGTGAGAAAtcg                                                >  2:1606654/1‑289 (MQ=255)
                                                                                                                                                                                                                                   cTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCAAAACGT‑GGTGGGTGTAATGGTGAGAAAtcg                                                >  1:561425/1‑289 (MQ=255)
                                                                                                                                                                                                                                   cTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCAACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCAAAACGT‑GGTGGGTGTAATGGTGAGAAAtcg                                                >  1:1026624/1‑289 (MQ=255)
                                                                                                                                                                                                                                                gAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAAt                                                                                                                                 >  2:1002231/1‑196 (MQ=255)
                                                                                                                                                                                                                                                gAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAAt                                                                                                                                 <  1:1002231/196‑1 (MQ=255)
                                                                                                                                                                                                                                                   ttGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGcc                                                                                                                                    <  1:1040431/190‑1 (MQ=255)
                                                                                                                                                                                                                                                          gTAGCCCG‑GCAGACCCATGCACAGCGCAAGGGACGGACGCTGCGGATAATTCCGCGACATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCAAAACGT‑GGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCAcc                         <  2:2013808/289‑1 (MQ=255)
                                                                                                                                                                                                                                                           tAGCCCGCGAAGA‑CCATGCAGTGAGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCTACCAGATGACCAGCCCCATCACCGCGACGCGAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGTCAGTCCGGTAACACAGGAAAACTTCAGCCTAGTGCCATCGCCAAAATTCCAGTCAATCTGTGTAGTGCCAATGAAAGCGTAAACCAGCGGAACCGGCGCTGTCAGC‑AAACGTATGTGCGTCGCATCGTGGGAAATCGGTTAGCTTACGCGATTGAtaccct                        >  2:662933/1‑284 (MQ=255)
                                                                                                                                                                                                                                                            aGCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCAAAACGT‑GGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTg                       <  1:1964368/289‑1 (MQ=255)
                                                                                                                                                                                                                                                             gCCCGCGAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTTCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCAAAACGT‑GGGGGGTGTAATGGTAAGGAATCGTTTCGTTTTCGCGATTAATCTCCTg                       >  2:881435/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                   gAAGC‑CCATGCAGTGCGCAAGTGACGGCCGCTGCGGAAAATTCCGCGCCATCCACCAGATGACCCGCCCCACCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCAAAACGT‑GGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCa                <  2:561425/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                   gAAGA‑CCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCAAAACGT‑GGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTc                 <  1:1417572/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                           aTGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCAAAACGT‑GGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCgg         <  1:1793234/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                           aTGCAGGGCGGAAGTGACGGACGCTGCGGATAAGTACGCGCCATCCACCAGATGACCCGCCCCAGCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCCGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCAAAACGT‑GGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCgg         <  2:1801354/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                            tGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGAt                                                                                                                                                                       <  1:370379/131‑1 (MQ=255)
                                                                                                                                                                                                                                                                            tGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCAAAACGT‑ggtgggtg                                                                <  1:1107126/233‑1 (MQ=255)
                                                                                                                                                                                                                                                                            tGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCAAAACGT‑GGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCggg        >  2:120317/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                  gcgcAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGAt                                                                                                                                                                       >  2:1661066/1‑125 (MQ=255)
                                                                                                                                                                                                                                                                                  gcgcAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGAt                                                                                                                                                                       <  1:1661066/125‑1 (MQ=255)
                                                                                                                                                                                                                                                                                  gcgcAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCAc                                                                                                   <  2:519711/193‑1 (MQ=255)
                                                                                                                                                                                                                                                                                  gcgcAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCaaa                                                                             >  1:1887097/1‑215 (MQ=255)
                                                                                                                                                                                                                                                                                  gcgcAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCaaa                                                                             <  2:1887097/215‑1 (MQ=255)
                                                                                                                                                                                                                                                                                  gcgcAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCAAAACGT‑GGTGGGTGTa                                                              >  2:2211086/1‑229 (MQ=255)
                                                                                                                                                                                                                                                                                  gcgcAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCAAAACGT‑GGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTTCATTTCACGATCGGGATGGGa  >  1:613533/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                  gcgcAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCAAAACGT‑GGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGa  >  2:633316/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                        
AGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTGCTACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGA‑CCATGCAGTGCGCAAGACTCGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTAAAACAAGACAGCCAGCGCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCAAAACGT‑GGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGA  >  CP042583/1799957‑1800518

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A