Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,922,443 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,922,4430GC99.6% 630.2 / NA 268intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base C (126/141);  total (127/141)
Fisher's exact test for biased strand distribution p-value = 4.74e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,922,4440CG99.2% 618.6 / ‑2.1 268intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  major base G (124/139);  minor base T (1/1);  total (127/141)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.83e-01
*CP0425831,922,4450TA97.7% 617.5 / NA 268intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (123/137);  minor base C (4/2);  total (127/141)
Fisher's exact test for biased strand distribution p-value = 4.30e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 268 total aligned reads displayed.

TGGGCGATGACTATTTTTTCGTTGCTGTCCGCCGCCATTGCACTGCTTCCCATGACTATAGTGCTCATCATGATCGCCATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACGCTACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCGCTCATCCAGCCGCACAGCAGAGTGCC  >  CP042583/1922164‑1922721
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                    
 gtgcgcTGACTTTTTTTGCGTTGCTGCCCGACGCCATTGCACTGCTTCCCCTGACTATAGTGCTCATCATGATCGCCATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCa                                                                                                                                                                                                                                                                              <  2:1175143/287‑1 (MQ=255)
        gACTATTTTTTCGTTGCTGTCCGCCGCCATTGCACTGCTTCCCATGACTATAGTGCTCATCATGATCGCCATGCTAAGGCTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCCCAACAATCAACAAGATAACCGCCAGAATGCCGCCGCCAATCCTTACCATAAAGCCGCCATCCCACACGAAGAAGCCCACGGTGTAGCCAACAACCGCGCCCGCCATCCACG‑AAACGCCCAGGTacca                                                                                                                                                                                                                                                                       >  2:850708/1‑286 (MQ=255)
           tATTTTTTCGTTGCTGTCCGCCGCCATTCCACTGCTTCCCATGACTATAGTGCTCATCATGATCGCCATGATAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCaaa                                                                                                                                                                                                                                                                    <  1:538972/289‑1 (MQ=255)
                   cGTTGCTGTCCGCCGCCATTGCACTGCTTCCCATGACTATAGTGCTCATCATGATCGCCATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑CCCACCGCACCGCCCAGGTAACCAACAAGACCgg                                                                                                                                                                                                                                                            >  2:1262153/1‑289 (MQ=255)
                          gTCCGCCGCCATTGCACTGCTTCCCATGACTATAGTGCTCATCATGATCGCCATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGcc                                                                                                                                                                                                                                                     <  1:230126/289‑1 (MQ=255)
                          gTCCGCCGCCATTGCACTGCTTCCCATGACTATAGTGCTCATCATGATCGCCATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGcc                                                                                                                                                                                                                                                     <  1:1939941/289‑1 (MQ=255)
                          agagacatccATTGCCCTGCTTCCATTGAGGTTAGTGCTAATCATGATCGCCATGTTATGTTTTTTCAGCTTCCTTTTCCTGCCATGAGCCTCCGTGGCTTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACACCAATCAACAAGTTAACCGCCAGAATGCTGCCGCCAATTACTACCATAAAGCCGCCATCCCAGCCGAAGAAGGCCACGGTGGAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGcc                                                                                                                                                                                                                                                     <  2:1752681/281‑1 (MQ=255)
                             cgccgcCATTGCACTGCTTCCCATGACTATAGTGCTCATCATGATCGCCATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAACCAGCCCGGTAAAGCCCg                                                                                                                                                                                                                                                   >  2:332406/1‑288 (MQ=255)
                                  ccATTGCACTGCTTCCCATGACTATAGTGCTCATCATGATCGCCATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGcc                                                                                                                                                                                                                                              >  2:401737/1‑288 (MQ=255)
                                  ccATTGCACTGCTTCCCATGACTATAGTGCTCATCATGATAGCCATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCCCAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAACCCGCCACCCCAGCCGAAGAATCCCACGCAGTTGCCAACAATCGAGCTACCC‑GCCACCGCACCGCCACGGACACCAACCAACCCGGAAACGACCGCTGcc                                                                                                                                                                                                                                              >  2:539763/1‑288 (MQ=255)
                                     ttGCACTGCTTCCCATGACTATAGTGCTCATCATGATCGCCATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCTAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTa                                                                                                                                                                                                                                           >  2:734898/1‑288 (MQ=255)
                                             cTTCCCATGACTATAGTGCTCATCATGATCGCCATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCACGCTGCCGTACCTgactct                                                                                                                                                                                                                                  >  1:1752681/1‑284 (MQ=255)
                                             cTTCCCATGACTATAGTGCTCATCATGATCGCCATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGCGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGGAAAGCCCGCTGCCGTACCTGCCGCt                                                                                                                                                                                                                                  >  1:586054/1‑289 (MQ=255)
                                                  cATGACTATAGTGCTCATCATGATCGCCATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCtttttt                                                                                                                                                                                                                             <  1:1541129/289‑1 (MQ=255)
                                                       cTATAGTGCTCATCATGATCGCCATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGt                                                                                                                                                                                                                         >  1:1565988/1‑288 (MQ=255)
                                                        tataGTGCTCATCATGATCGCCATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGc                                                                                                                                                                                                                       <  2:1594787/289‑1 (MQ=255)
                                                        atgagtcatcatcaTGATGGCGTGCCTAAGTTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGGAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACACTCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGc                                                                                                                                                                                                                       <  2:298127/281‑1 (MQ=255)
                                                          taGTGCTCATCATGATCGCCATGCTAAGGTTTTTCAGCATCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTTCCa                                                                                                                                                                                                                     >  2:1058243/1‑289 (MQ=255)
                                                            gTGCTCATCATGATCGCCATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGt                                                                                                                                                                                                                   >  1:1892277/1‑289 (MQ=255)
                                                            gTGCTCATCATGATCGCCATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGt                                                                                                                                                                                                                   >  1:61996/1‑289 (MQ=255)
                                                              gCTCATCATGATCGCCATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGtt                                                                                                                                                                                                                  <  2:2062062/288‑1 (MQ=255)
                                                               cTCATCATGATCGCCATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTaa                                                                                                                                                                                                                                                         <  1:2076044/248‑1 (MQ=255)
                                                               cTCATCATGATCGCCATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTcc                                                                                                                                                                                                                >  1:1008122/1‑289 (MQ=255)
                                                               cTCATCATGATCGCCATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTc                                                                                                                                                                                                                 >  2:1422365/1‑288 (MQ=255)
                                                               cTCATCATGATCGCCATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTc                                                                                                                                                                                                                 >  2:1628941/1‑288 (MQ=255)
                                                               cTCATCATGATCGCCATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTc                                                                                                                                                                                                                 >  2:877312/1‑288 (MQ=255)
                                                                tcatcaTGATCGCCATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTcc                                                                                                                                                                                                                <  1:1258999/288‑1 (MQ=255)
                                                                tcatcaTGATCGCCATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCa                                                                                                                                                                                                               >  1:364302/1‑289 (MQ=255)
                                                                 catcatGATCGCCATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAg                                                                                                                                                                                                              <  1:1509344/289‑1 (MQ=255)
                                                                 catcatGATCGCCATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAg                                                                                                                                                                                                              <  1:490554/289‑1 (MQ=255)
                                                                 catcatGATCGCCATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAg                                                                                                                                                                                                              <  1:688847/289‑1 (MQ=255)
                                                                 catcatGATCGCCAGGCTAAGGTTTTTCGGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAg                                                                                                                                                                                                              <  1:1683997/289‑1 (MQ=255)
                                                                 catactgatgtccATGCTAAGGTTTTTCAGCATCAATTTCTTCCCATTAGCCGCGGTTGCGTTCTTGCATTAATTGTGCATGGCGACGTTTTTCGCCAGTCAGAGCCACAATCAACAAGATAACCGCCAGAAGGCTGCCGCCAATCCTTACCATAAAGCCGCCATCCCTGCCGAAGAAGTCCACGGTGTAGCCAACACTCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAg                                                                                                                                                                                                              <  2:559413/278‑1 (MQ=255)
                                                                      tGATTGCCATCCTGTGGTTTTTAAGCGTCCATTTAATGCCATTAGCCTCCGTTGCGTTCATGCAGTAATTGTTCATGGCGTCGTTTTTCGCCAATCATCACAACAATCAACAAGAAAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCGTCCCAGCCGAAGAAGACCACGGTGTAGCAAACAATCGCGCTCGGC‑GCCGCCGAACCGCCCACGTAACCAAACTGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCAt                                                                                                                                                                                                         <  2:827770/289‑1 (MQ=255)
                                                                       gATCGCCATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCAt                                                                                                                                                                                                         >  1:2098497/1‑288 (MQ=255)
                                                                         tCGCCATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTa                                                                                                                                                                                                                                           >  1:1347583/1‑252 (MQ=255)
                                                                         tCGCCATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCa                                                                                                                                                                                                      >  1:730631/1‑289 (MQ=255)
                                                                         tCGCCATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGGTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCa                                                                                                                                                                                                      >  1:1475115/1‑289 (MQ=255)
                                                                           gCCATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGa                                                                                                                                                                                                    >  2:147752/1‑289 (MQ=255)
                                                                            ccATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTTCCCGTTCCaccccaggccga                                                                                                                                                                                                    >  2:1953534/1‑277 (MQ=255)
                                                                              aTGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGt                                                                                                                                                                                                                         >  1:2229236/1‑265 (MQ=255)
                                                                              aTGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCg                                                                                                                                                                                                 <  2:1887383/289‑1 (MQ=255)
                                                                              aTGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCg                                                                                                                                                                                                 >  1:1780071/1‑289 (MQ=255)
                                                                              aTGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCg                                                                                                                                                                                                 <  1:1714216/289‑1 (MQ=255)
                                                                                   aaGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAg                                                                                                                                                                                            <  1:276865/289‑1 (MQ=255)
                                                                                   aaGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAg                                                                                                                                                                                            <  2:439166/289‑1 (MQ=255)
                                                                                   aaGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAg                                                                                                                                                                                            <  1:382961/289‑1 (MQ=255)
                                                                                    aGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGc                                                                                                                                                                                           >  1:1264864/1‑289 (MQ=255)
                                                                                          ttCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATcaca                                                                                                                                                                                     >  1:325092/1‑289 (MQ=255)
                                                                                          ttCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCCTACCTGCCGCTTTTTTCGGTGCCAGGTTCAGCGCATGCCGACCGATCAGCATcacc                                                                                                                                                                                     >  2:2070535/1‑288 (MQ=255)
                                                                                           tacgcctctaTTTCAGGCCATTAGCCCCCGTTGTGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAg                                                                                                                                                                                    <  2:235280/280‑1 (MQ=255)
                                                                                               cGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCCACTGCAGACCGACCAGCATCACAGGAc                                                                                                                                                                                 >  2:1704013/1‑288 (MQ=255)
                                                                                                gTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGccc                                                                                                                                                                                                                                                    >  2:681021/1‑220 (MQ=255)
                                                                                                gTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGccc                                                                                                                                                                                                                                                    <  1:681021/220‑1 (MQ=255)
                                                                                                               ttAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCGCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGCAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCTGCGAATGCAGACCGAACCGCAACACAGTACCGTAGa                                                                                                                                                                           >  2:2080833/1‑278 (MQ=255)
                                                                                                                           gCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATa                                                                                                                                                    <  1:163542/289‑1 (MQ=255)
                                                                                                                                 ttGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATc                                                                                                                                              >  2:1285953/1‑289 (MQ=255)
                                                                                                                                         aTTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCg                                                                                                                                                                                                                                                   <  2:2172514/180‑1 (MQ=255)
                                                                                                                                         aTTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCg                                                                                                                                                                                                                                                   >  1:2172514/1‑180 (MQ=255)
                                                                                                                                         aTTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATcaca                                                                                                                                                                                     <  1:1188923/242‑1 (MQ=255)
                                                                                                                                          ttGTTCATGTCGGCGTTTGTCGCCAATCAACACAAAAATCAACAAGATACCCGCCAGAATGCTGCCACCAATCATTACCATAAAGCCGCCATCCCAGCCGAATCAGTCCTCGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGCACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACg                                                                                                                                     <  2:1779607/289‑1 (MQ=255)
                                                                                                                                               cATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCTCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAAACATATCGACGGtctg                                                                                                                                >  2:269016/1‑286 (MQ=255)
                                                                                                                                                       cGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAg                                                                                                                                                                                                              >  2:601617/1‑203 (MQ=255)
                                                                                                                                                            ttCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACCGGACCGTAGATCAGGAAGCCGATAACAAACATACAAATCAACACCACAGTTGGGTTACCTGCCggg                                                                                                                   >  2:2217303/1‑289 (MQ=255)
                                                                                                                                                                  aaTCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCCTCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATc                                                                                                             <  1:1991316/289‑1 (MQ=255)
                                                                                                                                                                   atcatcACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCCAATCGCCGGTTGGGTTAACTGCCGGGGTCAccc                                                                                                            >  2:909974/1‑289 (MQ=255)
                                                                                                                                                                         acaacaATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTaaa                                                                                                      <  1:1809755/289‑1 (MQ=255)
                                                                                                                                                                                    caaGACAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTcgcg                                                                                           <  1:909974/289‑1 (MQ=255)
                                                                                                                                                                                    caaGAAAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCAGCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTcgcg                                                                                           <  1:1851552/289‑1 (MQ=255)
                                                                                                                                                                                     aaGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGa                                                                                          >  2:711409/1‑289 (MQ=255)
                                                                                                                                                                                        atacacgacaggaggctggCGCAATTCAGTACCATAAGGCCGACTACCCGCACGAGGAGCTCGACGGTTTAGCTACCAGTCGCGCGCCCC‑GCCACCGAACCGCCCAGGTAGCCAAACAGTCCGGGAAAGCCCGCTGCCGGACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGGATGCATACCGATCAGCAGCACAGGACCGTAGTTCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATg                                                                                        <  2:2160974/274‑1 (MQ=255)
                                                                                                                                                                                         tAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGt                                                                                      <  1:1403195/289‑1 (MQ=255)
                                                                                                                                                                                            ccGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTaa                                                                                                                                                                                                                                                                         <  1:2041595/107‑1 (MQ=255)
                                                                                                                                                                                            ccGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGC‑TTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGACCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTACCGGTTTCATCCAGCAACCGATCGTCCCGACGGTCAcc                                                                                  >  2:1828371/1‑289 (MQ=255)
                                                                                                                                                                                                         gccgccAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCgg                                                                                                                    <  1:1599644/243‑1 (MQ=255)
                                                                                                                                                                                                                   acagccATAAGGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAGACAGCCCGGTAAAGCCCGCTGCCGTACCTGACGC‑TTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGt                                                           <  1:2193093/285‑1 (MQ=255)
                                                                                                                                                                                                                    ttACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGt                                                           >  2:1349091/1‑289 (MQ=255)
                                                                                                                                                                                                                    ttACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGt                                                           <  1:1090377/289‑1 (MQ=255)
                                                                                                                                                                                                                    ttACCACAACACCGCCATCCCCGCCGAAGAAGCCCCCGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGACCCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGt                                                           <  2:1797010/289‑1 (MQ=255)
                                                                                                                                                                                                                      aCCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATcaca                                                                                                                                                                                     <  1:772811/165‑1 (MQ=255)
                                                                                                                                                                                                                         atgaaGCCGCCCTCCCAGCCGAAGAAGCCCACGTGGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGccc                                                      <  2:364302/286‑1 (MQ=255)
                                                                                                                                                                                                                            aaGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCAc                                                   <  1:82857/289‑1 (MQ=255)
                                                                                                                                                                                                                             aGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACg                                                  >  2:1541109/1‑289 (MQ=255)
                                                                                                                                                                                                                               ccgccATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATaa                                                                                                                                                            <  1:1030020/181‑1 (MQ=255)
                                                                                                                                                                                                                               ccgccATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATaa                                                                                                                                                            >  2:1030020/1‑181 (MQ=255)
                                                                                                                                                                                                                               ccgccATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCCACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAAAGATAGTCGAGAAGGTCCCCAGTTTCATAAAGAAAACCCCTGTTGCCCCACGGt                                                >  2:1005909/1‑289 (MQ=255)
                                                                                                                                                                                                                                  ccATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATa                                                                                                                                                    >  2:196168/1‑186 (MQ=255)
                                                                                                                                                                                                                                  ccATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATa                                                                                                                                                    <  1:196168/186‑1 (MQ=255)
                                                                                                                                                                                                                                  ccATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAACCCGGTAAAGCCCGCTGCCGTACCTGCCGATTTTTTCGGTGCCAGTTCCAGCGCATGAAGACCGAACAGCATCACAGGACCGTAGAACAGGAAGACGAAAACAATGATACAAATCATAGCGACGGTTGGGTTACCTGCCGGGTACATGCAGTAAACGCGAGGCGCTATGGTCAACAGGGTCATACAGAAGACGACCGTGACCCGTCGGTTg                                              >  2:115086/1‑288 (MQ=255)
                                                                                                                                                                                                                                   cagcccAGCCGAAGAAGGCCACGGCGTAGCCAACAACCGCGCTCGCC‑GCCCCCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGcc                                            <  2:1475115/286‑1 (MQ=255)
                                                                                                                                                                                                                                      cccAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGAAAGTCGCGATGGTCACCAGTGTCAAAAAGAAAACGCCGGTTGCCCCACGGTTGccccc                                         >  2:519780/1‑286 (MQ=255)
                                                                                                                                                                                                                                                            gtAGCCAACAATCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAg                   <  1:1248344/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                 caacaaTCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCg                <  1:1434004/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                 caacaaTCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGca              <  1:1125899/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                     aaTCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCTGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCAAACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATc                             >  1:1162438/1‑270 (MQ=255)
                                                                                                                                                                                                                                                                     aaTCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCCGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGAGAACAATCATACAAATCATATCAACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGTCTTTATCCGACGTCCCGCCGcaacga          >  2:447377/1‑285 (MQ=255)
                                                                                                                                                                                                                                                                     aaTCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTCATCAGCCATCCAGCCGCAcagc          >  2:1871173/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                      aTCGCGCTCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCAcagca         <  2:2184445/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                       tCGCGCCCGCC‑GCCACCGAACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAG‑AAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCaga       <  2:2028404/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                             tCGCC‑GCCACCGAACCGCCCAGGTAACCAAGCAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGTTGCCAGTTCCATCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAATCGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGcc  <  1:873636/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                    
TGGGCGATGACTATTTTTTCGTTGCTGTCCGCCGCCATTGCACTGCTTCCCATGACTATAGTGCTCATCATGATCGCCATGCTAAGGTTTTTCAGCGTCAATTTCATGCCATTAGCCTCCGTTGCGTTCTTGCAGTAATTGTTCATGGCGACGTTTTTCGCCAATCATCACAACAATCAACAAGATAACCGCCAGAATGCTGCCGCCAATCATTACCATAAAGCCGCCATCCCAGCCGAAGAAGTCCACGGTGTAGCCAACAATCGCGCTCGCC‑GCCACGCTACCGCCCAGGTAACCAAACAGCCCGGTAAAGCCCGCTGCCGTACCTGCCGCTTTTTTCGGTGCCAGTTCCAGCGCATGCAGACCGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCGCTCATCCAGCCGCACAGCAGAGTGCC  >  CP042583/1922164‑1922721

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A