Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,950,143 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,950,1430AT98.4% 594.9 / NA 255intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (1/1);  major base T (146/103);  minor base G (3/1);  total (150/105)
Fisher's exact test for biased strand distribution p-value = 6.46e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,950,1440CG100.0% 609.9 / NA 255intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (150/105);  total (150/105)
*CP0425831,950,1450TA99.2% 608.4 / NA 255intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (149/104);  minor base G (1/1);  total (150/105)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 255 total aligned reads displayed.

CCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAAACTAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTC  >  CP042583/1949867‑1950421
                                                                                                                                                                                                                                                                                    |||                                                                                                                                                                                                                                                                                    
cccGCCAACCACTCAGCCGGCCTGTTGTCGCCAGAGGAACCCGTGGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGc                                                                                                                                                                                                                                                                            <  2:1434431/289‑1 (MQ=255)
 ccGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCg                                                                                                                                                                                                                                                                           <  2:430991/289‑1 (MQ=255)
  cGGCAACCCGCACGCGGCGCTTGTGTGACCAGAAGACCACGTCGCGCTGTTTTACATGTTCCAGCAGAGGCGCGTAACGCAGCCACTGTTTGGCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAGCGGGCAGTTGATATTGACTCCCCCCGAATGAAGCTTACCGAGAGCGTGGTCGATGGTAGAAACCGGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGt                                                                                                                                                                                                                                                                          <  2:2019686/289‑1 (MQ=255)
  cGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGt                                                                                                                                                                                                                                                                          <  1:1795314/289‑1 (MQ=255)
   ggCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTg                                                                                                                                                                                                                                                                         >  1:1273598/1‑289 (MQ=255)
       accgccACGCCGTGCTTTTGTCGCCAGCAGACCCAGTCGCGCTGTTTTTCGCTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGt                                                                                                                                                                                                                                                                     <  1:296618/289‑1 (MQ=255)
              cgccgcGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGc                                                                                                                                                                                                                                                              >  2:1926941/1‑289 (MQ=255)
                 cgcgCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGaa                                                                                                                                                                                                                                                           <  1:220441/289‑1 (MQ=255)
                 cgcgCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGaa                                                                                                                                                                                                                                                           <  2:318231/289‑1 (MQ=255)
                                agaagaACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCg                                                                                                                                                                                                                                            >  1:1832474/1‑289 (MQ=255)
                                                             tCCAGACGGGGCCCTTCGCGCAGCCACGGTTTGCCGTCCTGCCACCAGTCACCCGGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGa                                                                                                                                                                                                                                           <  2:235765/261‑1 (MQ=255)
                                                             tCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTa                                                                                                                                                                                                               >  1:204589/1‑289 (MQ=255)
                                                             tCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCCGGCGAATTGCCTGATTTCCGCCCCAGTCAATTa                                                                                                                                                                                                               >  2:713405/1‑289 (MQ=255)
                                                                      ggCGCTACCCGCAGCCACGGTTTGTCGTCCTGCCACCCGGCACCCCGACGCTGTGGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCcggc                                                                                                                                                                                                       <  2:331273/288‑1 (MQ=255)
                                                                       gcgcTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAt                                                                                                                                                                                                                                 >  1:235765/1‑261 (MQ=255)
                                                                       gcgcTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCcggcgg                                                                                                                                                                                                     >  1:1579004/1‑289 (MQ=255)
                                                                                            tGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCgcgc                                                                                                                                                                                                                           <  1:338337/246‑1 (MQ=255)
                                                                                                  ccTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGaa                                                                                                                                                                                                                                                           >  2:1119566/1‑208 (MQ=255)
                                                                                                   cTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGtttt                                                                                                                                                                         >  2:96732/1‑289 (MQ=255)
                                                                                                    tGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTAAATTAGCTCCGGCGGGAGATCGGCGGTTAAGAGAATCAGgtttt                                                                                                                                                                        >  1:2139195/1‑289 (MQ=255)
                                                                                                     gCCACCAGTCACCCAGACGCGATTGCCAGCTAGGCCCGGTATCGTCCATTTCGCCATGCAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTtc                                                                                                                                                                       <  1:1285050/289‑1 (MQ=255)
                                                                                                      ccaccaGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTtc                                                                                                                                                                       >  1:1223596/1‑288 (MQ=255)
                                                                                                             tCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGACTGGCGGTTAAGTGAATCAGTTTTTCTCCGGTTa                                                                                                                                                               >  1:1195358/1‑289 (MQ=255)
                                                                                                              cACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGt                                                                                                                                                                 <  1:96732/286‑1 (MQ=255)
                                                                                                                 ccAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAAccc                                                                                                                                                           >  2:211969/1‑289 (MQ=255)
                                                                                                                    gACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAAcc                                                                                                                                                            <  2:583148/285‑1 (MQ=255)
                                                                                                                     aCGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCCATTAGCTCCGGCGGGCGATCGGCGGCTAAGGGGATCAGGTTTTCTCCGGTTAACCCGGCt                                                                                                                                                       >  2:1395932/1‑289 (MQ=255)
                                                                                                                         tGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCaa                                                                                                                                                   >  1:1979757/1‑289 (MQ=255)
                                                                                                                          ggtGCCAGCTATGCCCCGTTTCTTCCATTTCGCCCAACAGCGGTTCAGTAAACGGGAAGTTGATATTGACTCCCCCCGCATGAAGCGTACCGAGAGCGGGGTCGATGGTAGAAACCAGCCAACGGGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAAt                                                                                                                                                  <  2:1773121/287‑1 (MQ=255)
                                                                                                                          gTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTCCaa                                                                                                                                                   >  2:2004168/1‑288 (MQ=255)
                                                                                                                               cAGGTAAGCCCGTGATCGTCCCTTTCTCCATAAATCGGTTCAGCAAACGGTCGGTTGATATGGGCTCCCCCCGCATGAAGGGGACCGAGAGCGGGGTCGATGGTAGAAACCAGACAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTg                                                                                                                                             <  2:2139195/289‑1 (MQ=255)
                                                                                                                               cAGCTAGGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGGAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTg                                                                                                                                             <  1:574069/289‑1 (MQ=255)
                                                                                                                               cAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTg                                                                                                                                             <  1:713405/289‑1 (MQ=255)
                                                                                                                                     aGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGAt                                                                                                                                       <  1:100638/289‑1 (MQ=255)
                                                                                                                                     aGCCCGGGATCGTCCATTTGGCAATAAAGCGGTTCAGCAAACGGGCAGTGGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGGCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGTTGATAGGCGAACATTCCCTGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTGCTCCGGTTAACCCGGCTTCAATCAGTGCCGGAt                                                                                                                                       <  1:2171623/289‑1 (MQ=255)
                                                                                                                                          ggTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAgaga                                                                                                                                  <  1:1133165/289‑1 (MQ=255)
                                                                                                                                            tATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGAtt                                                                                                                                >  1:257636/1‑289 (MQ=255)
                                                                                                                                            tATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACT‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAAt                                                                                                                                                  <  2:86515/270‑1 (MQ=255)
                                                                                                                                                      ttCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCCATTAGCTCCGGCGGGCGAGCGGCGGGTAAGAGAATCAGTTTTTCTCCGGTTAACCGCGCTTCAATCAGTGTCGGATAGAGATTTGCCActgc                                                                                                                       >  2:725241/1‑288 (MQ=255)
                                                                                                                                                            aTACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCg                                                                                                                <  2:1716046/289‑1 (MQ=255)
                                                                                                                                                             taaggCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAGGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCgg                                                                                                               <  2:1644254/285‑1 (MQ=255)
                                                                                                                                                                  cGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTc                                                                                                          >  1:1043501/1‑289 (MQ=255)
                                                                                                                                                                  cGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTc                                                                                                          >  1:2132682/1‑289 (MQ=255)
                                                                                                                                                                  cGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTc                                                                                                          >  1:207846/1‑289 (MQ=255)
                                                                                                                                                                       cAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTCACaa                                                                                                      >  1:443041/1‑288 (MQ=255)
                                                                                                                                                                          cAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCgg                                                                                                                                                                  <  2:1798891/225‑1 (MQ=255)
                                                                                                                                                                           aaaCGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTCACAATCa                                                                                                   <  1:414206/287‑1 (MQ=255)
                                                                                                                                                                                       gATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGgctgc                                                                                     <  1:1926941/289‑1 (MQ=255)
                                                                                                                                                                                           tGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCtgcttgc                                                                                 <  2:443041/289‑1 (MQ=255)
                                                                                                                                                                                               cTCCCCCCGCATGAATCGTACCGAGAGCGTGGTGGATGGTAGAAACCAGCCAACCTGCGGCGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGACAGAGGCGAACATTCCCAGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCCCCGGCGGGCGGTCGGCGGTTAAGAACATCCGGTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCGGGATAGAGATTTTCCACCGCCATCCCGGAGGTCAGGATTACCGCCACCGgcctctggcgca                                                                              >  2:395884/1‑278 (MQ=255)
                                                                                                                                                                                               cTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGAGCCGCAGACAATTAGCTCCGGCGGGCGATAGGCGGGTAAGAGAATCAGTTTTTCTCCGGTTAAACCGGCTTCAATCAGTGACGGATACAGATTTGCCACCGCCGTGCCGGAGGGCACAATCACCGCCACCGGCTGCTTGCTGAc                                                                             >  1:172072/1‑289 (MQ=255)
                                                                                                                                                                                                tCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCATTCAGTGCCTGATAGAGATTTGCCACCGCCGTGCCGGCAGTCCCAATCACCGCCACCGGCCGCTTGCTgc                                                                              >  2:1272557/1‑286 (MQ=255)
                                                                                                                                                                                                  cccccGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAAt                                                                                                                                                  <  2:1310537/217‑1 (MQ=255)
                                                                                                                                                                                                  cccccGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACtt                                                                           >  2:643560/1‑288 (MQ=255)
                                                                                                                                                                                                  cccccGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACtt                                                                           >  1:1769031/1‑288 (MQ=255)
                                                                                                                                                                                                  cccccGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACtt                                                                           >  1:679798/1‑288 (MQ=255)
                                                                                                                                                                                                  cccccGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAG‑TCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACttt                                                                          >  1:2213278/1‑288 (MQ=255)
                                                                                                                                                                                                       gCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTg                                                                                                                                             <  2:1856143/217‑1 (MQ=255)
                                                                                                                                                                                                       gCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACTTTCGCCa                                                                     >  1:467504/1‑289 (MQ=255)
                                                                                                                                                                                                        cATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACTTTCGCCa                                                                     >  1:609113/1‑288 (MQ=255)
                                                                                                                                                                                                             aGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGCCCCCATCACCCCCACCGGCCGCTTGCCGACTCTCCCCCGcccc                                                                >  2:2211968/1‑288 (MQ=255)
                                                                                                                                                                                                               cGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACTTTCGCCAGCCCCAgc                                                             >  1:1372475/1‑289 (MQ=255)
                                                                                                                                                                                                                 tACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGCGGTCACAATCACCGCCACCGGCCGCTTGCTGACTTTCCCCAGCCCCAgcg                                                            >  2:527096/1‑288 (MQ=255)
                                                                                                                                                                                                                  aCCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATACAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCCCCGGCTGCTTTCGCACTTTCGCCCGCCCCCgccc                                                           >  2:1202910/1‑286 (MQ=255)
                                                                                                                                                                                                                    cgggagCGTGGTCGTTGGTAGAAACCGGCCAACGTGCGGGGATGTCCGGGGTCGGGCGCGGCAAAGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCTCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACTTTCGCCAGCCCCAGCGCCAg                                                        <  2:47144/286‑1 (MQ=255)
                                                                                                                                                                                                                        agCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGt                                                                                                                                                                                                                                                                          >  2:1072221/1‑75 (MQ=255)
                                                                                                                                                                                                                        agCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACTTTCGCCAGccc                                                                 <  2:759536/276‑1 (MQ=255)
                                                                                                                                                                                                                         gCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAg                                                                                                             <  1:649539/231‑1 (MQ=255)
                                                                                                                                                                                                                         gCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGc                                                    >  1:854763/1‑288 (MQ=255)
                                                                                                                                                                                                                          cGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAgaga                                                                                                                                  <  1:76428/209‑1 (MQ=255)
                                                                                                                                                                                                                            tGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCa                                                >  1:872493/1‑289 (MQ=255)
                                                                                                                                                                                                                                 gATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTTCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGGCACAATCCCCGCAACCGGCTGCTTGCTGACTTTCGCCAGCCCCCGCCCCAGATCCCCCAAccc                                            >  2:2258585/1‑288 (MQ=255)
                                                                                                                                                                                                                                    ggTAGAAACCAGCCGACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGCGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACg                                         <  1:395884/288‑1 (MQ=255)
                                                                                                                                                                                                                                      tAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCTGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACTTTCGCCAGCCCCAGCGCCAGATCCCCCACCCCACGcc                                       >  2:732704/1‑287 (MQ=255)
                                                                                                                                                                                                                                         aaaCCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCgg                                                                                                               <  2:2106189/213‑1 (MQ=255)
                                                                                                                                                                                                                                         aaaCCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCgg                                                                                                               >  1:2106189/1‑213 (MQ=255)
                                                                                                                                                                                                                                         aaaCCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACTTTCGCCAGCCCCCGCCCCAGATGCCCccacccacccccac                                    >  2:2150674/1‑282 (MQ=255)
                                                                                                                                                                                                                                         aaaCCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATc                                   >  1:742676/1‑289 (MQ=255)
                                                                                                                                                                                                                                          aaCCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCAt                                    <  1:1202910/287‑1 (MQ=255)
                                                                                                                                                                                                                                             cAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGaaa                               <  1:725241/289‑1 (MQ=255)
                                                                                                                                                                                                                                              aGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAAcc                                                                                                                                                            >  2:1251643/1‑163 (MQ=255)
                                                                                                                                                                                                                                              aGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAAcc                                                                                                                                                            <  1:1251643/163‑1 (MQ=255)
                                                                                                                                                                                                                                                ccAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGAt                                                                                                                                                                                                <  1:1638561/125‑1 (MQ=255)
                                                                                                                                                                                                                                                ccAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATgg                            >  1:2099422/1‑289 (MQ=255)
                                                                                                                                                                                                                                                              tatCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGtgaatgaa              >  1:1885329/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                tCCTGGGTCGGGCGCGGCAATGAAATGCTGTGCGTGGGGGGGAGGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTTCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGgtg                         <  2:667408/276‑1 (MQ=255)
                                                                                                                                                                                                                                                                tCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACTTTCCCCACCCCCACCCCACGATGCCCCAACCCACCCTCACCCAACTGGGTGTCGTGcatgaatg            >  2:1673120/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                  cTGGGTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCg          <  1:1497130/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                     ggTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATcgg                                                                                                                                                                                             >  1:1506856/1‑107 (MQ=255)
                                                                                                                                                                                                                                                                     ggTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATcgg                                                                                                                                                                                             <  2:1506856/107‑1 (MQ=255)
                                                                                                                                                                                                                                                                     ggTCGGGCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCCCATCGAAATGGGTGTGGTGAATGAATGCGGaa       >  1:200501/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                          ggCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTtct                                                                                                                                                                      >  2:877103/1‑125 (MQ=255)
                                                                                                                                                                                                                                                                          ggCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCAc                                                                                                                          <  1:171148/169‑1 (MQ=255)
                                                                                                                                                                                                                                                                          ggCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCAc                                                                                                                          >  2:171148/1‑169 (MQ=255)
                                                                                                                                                                                                                                                                          ggCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACTTTCGCCAGCCCCAGCGCCAGCTCCCCCAACCCACGCTCATCCAAATGGGTGTGGTGAATGAATGCGGAAAtcc   >  2:1619164/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                          ggCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCCCATCGAACTGGGGGTGGTGAATGAATTCGGAATtct   >  2:1477320/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                          ggCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCCCATCGAAATGGGTGTGGTGCATGAATGCGGGATtct   >  2:374507/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                          ggCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACTTTCCCCAGCCCCAGCCCCAGATGCCCCAACCCCCGCTCCCCGAACAGGGGGTGGTGAATGAATGCGGAATtct   >  2:1937040/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                          ggCGCGGCAATGAAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCACCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATtct   >  1:1105213/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                          ggCGCGGCAATGAAATACTGTGCGTGGGCTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACg                                         >  1:487509/1‑250 (MQ=255)
                                                                                                                                                                                                                                                                                    |||                                                                                                                                                                                                                                                                                    
CCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAAACTAATACTGTGCGTGGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGATTCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTC  >  CP042583/1949867‑1950421

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A