Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,952,793 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,952,7930GC99.6% 656.7 / NA 279intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (143/134);  total (144/135)
Fisher's exact test for biased strand distribution p-value = 4.86e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01
*CP0425831,952,7940CG99.6% 655.4 / NA 279intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (143/134);  minor base A (1/0);  total (144/135)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,952,7950TA98.9% 660.2 / ‑3.2 279intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (143/133);  minor base G (1/2);  total (144/135)
Fisher's exact test for biased strand distribution p-value = 6.12e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 279 total aligned reads displayed.

AGTGATGCGTACATGTTTCGAGTGTTTTACTCATCAGCTGCTGCCCCACTTTTTCGCCACGCAACGCTTCACTGACAATCACCCGACCTATAACGACCGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACGCTTAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTAGTGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCAACATCCGACCCAGAGCGGACTTTGGTTGTTTGACTGCGGTGAAGGCACCCAGCATCAGCTACTGCATACCGCCTTTAACCCTGGAAAACTGGACAAGAT  >  CP042583/1952513‑1953074
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                       
aGTGATGCGTACATGTTTCGAGTGTTTTACTCATCAGCTGCTGCCCCACTTTTTCGCCACGCAACGCTTCACTGACAATCACCCGACCTATAACGACCGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTc                                                                                                                                                                                                                                                                                   >  1:109517/1‑289 (MQ=255)
   gATGCGTACATGTTTCGAGTGTTTTACTCATCAGCTGCTGCCCCACTTTTTCGCCACGCAACGCTTCACTGACAATCACCCGACCTATAACGACCGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCa                                                                                                                                                                                                                                                                                  <  2:856633/287‑1 (MQ=255)
   gATGCGTACATGTTTCGAGTGTTTTACTCATCAGCTGCTGCCCCACTTTTTCGCCACGCAACGCTTCACTGACAATCACCCGACCTATAACGACCGGCCCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGTGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCaga                                                                                                                                                                                                                                                                                <  1:1174821/289‑1 (MQ=255)
     tGCGTACATGTTTCGAGTGTTTTACTCATCAGCTGCTGCCCCACTTTTTCGCCACGCAACGCTTCACTGACAATCACCCGACCTATAACGACCGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCagag                                                                                                                                                                                                                                                                               <  1:1345505/288‑1 (MQ=255)
        gTACATGTTTCGAGTGTTTTACTCATCAGCTGCTGCCCCACTTTTTCGCCACGCAACGCTTCACTGACAATCACTCGACCTATAACGACCGGCTCAAGATCTTCATCACTTTTCAGAATCCTCGCATACGCCACCAGGTCATCGTTTTTCCAACTGAGAATATTGCGAGTACCCCCCGTCAAACCATCACCACCGATATCCTGATAAGGTCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAATCTG‑GGAAACCGATAATTCAGAATGaa                                                                                                                                                                                                                                                                           >  2:1908935/1‑288 (MQ=255)
                       tgtttCCTCATACGCTGCTGCCCCACTTTTTCGCCACGCAACGCTTCACTGACAATCACCCGACCTATAACGACCGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTGTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCAtt                                                                                                                                                                                                                                                            <  2:2086198/287‑1 (MQ=255)
                                  caGCTGCTGCCCCACTTTTTCGCCACGCAACGCTTCACTGACAATCACCCGACCTATAACGACCGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAGGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATg                                                                                                                                                                                                                                                 <  1:640477/289‑1 (MQ=255)
                                  caGCTGCTGCCCCACTTTTTCGCCACGCAACGCTTCACTGACAATCACCCGACCTATAACGACCGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATa                                                                                                                                                                                                                                                    >  2:10735/1‑286 (MQ=255)
                                     ctgctgCCCCACTTTTTCGCCACGCAACGCTTCACTGACAATCACCCGACCTATAACGACCGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGct                                                                                                                                                                                                                                               >  1:1421543/1‑288 (MQ=255)
                                      tgctgcCCCACTTTTTCGCCACGCAACGCTTCACTGACAATCACCCGACCTATAACGACCGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGctct                                                                                                                                                                                                                                             <  2:942583/289‑1 (MQ=255)
                                      tgctgcCCCACTTTTTCGCCACGCAACGCTTCACTGACAATCACCCGACCTATAACGACCGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGctct                                                                                                                                                                                                                                             <  2:655043/289‑1 (MQ=255)
                                        ctgcCCCACTTTTTCGCCACGCAACGCTTCACTGACAATCACCCGACCTATAACGACCGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCtctc                                                                                                                                                                                                                                            >  2:734042/1‑288 (MQ=255)
                                            cccACTTTTTCGCCACGCAACGCTTCACTGACAATCACCCGACCTATAACGACCGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCtttt                                                                                                                                                                                                                                       <  1:409637/289‑1 (MQ=255)
                                                cTTTTTCGCCACGCAACGCTTCACTGACAATCACCCGACCTATAACGACCGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACAATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCCCCTTTTAGAt                                                                                                                                                                                                                                   >  2:1442157/1‑289 (MQ=255)
                                                  ttttCGCCACGCAACGCTTCACTGACAATCACCCGACCTATAACGACCGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGt                                                                                                                                                                                                                                 <  1:590522/289‑1 (MQ=255)
                                                  ttttCGCCACGCAACGCTTCACTGACAATCACCCGACCTATAACGACCGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGt                                                                                                                                                                                                                                 <  1:67087/289‑1 (MQ=255)
                                                  tttcCGCCACGCAACGCTTCACTGACAATCACCCGACCTATAACGACCGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGt                                                                                                                                                                                                                                 <  1:1959485/289‑1 (MQ=255)
                                                  attcccccACGCAACCCTTCACTGACAATCACCCGACCTAAAACGACCGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGt                                                                                                                                                                                                                                 <  2:1955463/283‑1 (MQ=255)
                                                   tttCGCCACGCAACGCTTCACTGACAATCACCCGACCTATAACGACCGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTa                                                                                                                                                                                                                                <  1:1908935/289‑1 (MQ=255)
                                                   tttCGCCACGCAACGCTTCACTGACAATCACCCGACCTATAACGACCGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTa                                                                                                                                                                                                                                <  1:734042/289‑1 (MQ=255)
                                                   tttCGCCACGCAACGCTTCACTGACAATCACCCGACCTATAACGACCGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTa                                                                                                                                                                                                                                <  1:1537558/289‑1 (MQ=255)
                                                           cGCAACGCTTCACTGACAATCACCCGACCTATAACGACCGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCTCCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCttt                                                                                                                                                                                                                                        <  2:1613414/273‑1 (MQ=255)
                                                                     cACTGACAATCACCCGACCTATAACGACCGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATCATTCAGAGTGATGCAGATCTTGCAATTCAATAATACTGCTCTCCTTTTAGATGTATGCCTTATACTACCCGGa                                                                                                                                                                                                              >  2:230502/1‑289 (MQ=255)
                                                                     cACTGACAATCACCCGACCTATAACGACCGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGa                                                                                                                                                                                                              >  2:146469/1‑289 (MQ=255)
                                                                        tGACAATCACCCGACCTATAACGACCGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAata                                                                                                                                                                                                           >  1:1304321/1‑289 (MQ=255)
                                                                            aaTCACCCGACCTATAACGACCGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGctc                                                                                                                                                                                                                                              <  1:20731/250‑1 (MQ=255)
                                                                                 cccGACCTATAACGACCGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGaa                                                                                                                                                                                                  <  1:347893/289‑1 (MQ=255)
                                                                                 cccGACCTATAACGACCGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGACTTATACTAGCCGGAATATTTTTTGaa                                                                                                                                                                                                  >  2:749101/1‑289 (MQ=255)
                                                                                         ataACGACCGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATg                                                                                                                                                                                                                                                                          <  2:386531/209‑1 (MQ=255)
                                                                                          taACGACCGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGt                                                                                                                                                                                                                                 >  2:1439831/1‑249 (MQ=255)
                                                                                          taACGACCGGCTCAAGATCAGCATCACTTTTCAGAAGCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCAACATCCATATGCTGATAAGGGCAATGCTGCTCGACAACAAACACCGCGCAACGCAATTGTAATAAGGCATAAAGCTG‑GGAAACCGATAAGTCAGAGGGATGCAGGTCTTGCAATTCAAGCATAATGCTCACCTTTGTGATTTATGCCGTACACGAGCCGGAATAGTTGTTGCAACGtgagta                                                                                                                                                                                         >  2:1097081/1‑286 (MQ=255)
                                                                                               aCCGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTACTAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCa                                                                                                                                                                                    >  2:131101/1‑289 (MQ=255)
                                                                                               aCCGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGct                                                                                                                                                                                                                                               >  2:1706266/1‑230 (MQ=255)
                                                                                                ccGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGct                                                                                                                                                                                                                                               <  1:1460073/229‑1 (MQ=255)
                                                                                                ccGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATTTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCAt                                                                                                                                                                                   >  1:98736/1‑289 (MQ=255)
                                                                                                ccGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATATTAGCCGGAATATTTTTTGAAACGTGATGAACTCAt                                                                                                                                                                                   >  1:1553644/1‑289 (MQ=255)
                                                                                                ccGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCAt                                                                                                                                                                                   >  1:2128587/1‑289 (MQ=255)
                                                                                                              tcatcaCTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGt                                                                                                                                                                                                                                 >  1:464922/1‑229 (MQ=255)
                                                                                                              tcatcaCTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGt                                                                                                                                                                                                                                 <  2:464922/229‑1 (MQ=255)
                                                                                                              tcatcaCTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGt                                                                                                                                                                                                                                 >  1:89185/1‑229 (MQ=255)
                                                                                                              tcatcaCTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGt                                                                                                                                                                                                                                 <  1:1030098/229‑1 (MQ=255)
                                                                                                              tcatcaCTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGt                                                                                                                                                                                                                                 >  2:1030098/1‑229 (MQ=255)
                                                                                                                atcaCTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTa                                                                                                                                                                   <  2:1488882/289‑1 (MQ=255)
                                                                                                                 tcaCTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAg                                                                                                                                                                  <  1:921552/289‑1 (MQ=255)
                                                                                                                    cTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGt                                                                                                                                                                >  1:1854659/1‑288 (MQ=255)
                                                                                                                       ttCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATg                                                                                                                                                                                                                                                 >  1:439507/1‑204 (MQ=255)
                                                                                                                       ttCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATg                                                                                                                                                                                                                                                 <  2:439507/204‑1 (MQ=255)
                                                                                                                         cAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGt                                                                                                                                                                                                                                 >  1:1225524/1‑218 (MQ=255)
                                                                                                                         cAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGt                                                                                                                                                                                                                                 <  2:1225524/218‑1 (MQ=255)
                                                                                                                          aGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACttca                                                                                                                                                          >  2:517418/1‑285 (MQ=255)
                                                                                                                            aaTCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACttcagcc                                                                                                                                                       >  1:1608557/1‑283 (MQ=255)
                                                                                                                            aaTCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACttcagcc                                                                                                                                                       >  2:1395609/1‑283 (MQ=255)
                                                                                                                             aTCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACttcagc                                                                                                                                                        <  2:2034460/287‑6 (MQ=255)
                                                                                                                               ccTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGAAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGgt                                                                                                                                                    <  2:606844/289‑1 (MQ=255)
                                                                                                                                 tCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGgtgt                                                                                                                                                  >  2:1564577/1‑289 (MQ=255)
                                                                                                                                             ccaGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATAtttttt                                                                                                                                                                                                     >  2:1217772/1‑226 (MQ=255)
                                                                                                                                             ccaGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCAc                                                                                                                                      >  1:2025215/1‑289 (MQ=255)
                                                                                                                                              caGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCAcg                                                                                                                                     <  1:517418/289‑1 (MQ=255)
                                                                                                                                                 ttCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAATGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAACCGTGATGAACTCATGGAATTACTTTTTTTAGGTACTTCAGCCGTTGTGCCAGCCCGCACgcgc                                                                                                                                  >  2:818823/1‑289 (MQ=255)
                                                                                                                                                 ttCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCtttt                                                                                                                                                                                                                                       >  2:1823105/1‑188 (MQ=255)
                                                                                                                                                 ttCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCATCCGGTGTGCCAACCCGCACgcgc                                                                                                                                  >  1:1407098/1‑289 (MQ=255)
                                                                                                                                                  tcatcaTTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCAcgcg                                                                                                                                   <  1:26513/287‑1 (MQ=255)
                                                                                                                                                  tcatcaTTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGACATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCa                                                                                                                                 <  2:271567/289‑1 (MQ=255)
                                                                                                                                                     tcatTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTc                                                                                                                                                                                                                                                           >  1:831830/1‑164 (MQ=255)
                                                                                                                                                     tcatTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTc                                                                                                                                                                                                                                                           <  2:831830/164‑1 (MQ=255)
                                                                                                                                                      catTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGt                                                                                                                             <  1:1142658/289‑1 (MQ=255)
                                                                                                                                                           ttCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACgg                                                                                                                        <  1:933698/289‑1 (MQ=255)
                                                                                                                                                                      aaTATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCCGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCtt                                                                                                             <  1:1671644/289‑1 (MQ=255)
                                                                                                                                                                           ggCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAata                                                                                                                   <  2:1776182/278‑1 (MQ=255)
                                                                                                                                                                           ggCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAata                                                                                                                   >  1:1776182/1‑278 (MQ=255)
                                                                                                                                                                            gCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCt                                                                                                        >  1:1052415/1‑288 (MQ=255)
                                                                                                                                                                                   tCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACgg                                                                                                                        <  1:740432/265‑1 (MQ=255)
                                                                                                                                                                                             aaTCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATACAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCAACATCCGACCCagag                                                                                      <  1:2248584/289‑1 (MQ=255)
                                                                                                                                                                                              atcatcACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCAACATCCGACCCAGAGc                                                                                     >  2:1514712/1‑289 (MQ=255)
                                                                                                                                                                                                             atCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCAACATCCGACCCAGAGCGGACTTTGGTTGttt                                                                      <  2:2159141/289‑1 (MQ=255)
                                                                                                                                                                                                             atCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCAACATCCGACCCAGAGCGGACTTTGGTTGttt                                                                      >  2:570282/1‑289 (MQ=255)
                                                                                                                                                                                                                 tGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCAACATCCGACCCAGAGCGGACTTTGGTTGTTTGACt                                                                  <  1:554276/289‑1 (MQ=255)
                                                                                                                                                                                                                   aTAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCa                                                                                                                                                                                                                                                      >  2:916391/1‑107 (MQ=255)
                                                                                                                                                                                                                   aTAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCa                                                                                                                                       >  1:313198/1‑218 (MQ=255)
                                                                                                                                                                                                                   aTAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCAACATc                                                                                                <  2:2005738/257‑1 (MQ=255)
                                                                                                                                                                                                                   aTAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCAACATCCGACCCAGAGCGGACTTTGGTTGTTTGACTGc                                                                >  2:1372550/1‑289 (MQ=255)
                                                                                                                                                                                                                        ggCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCAACATCCGACCCAGAGCGGACTTTGGTTGTTTGACTGCGGTGa                                                           >  2:24878/1‑289 (MQ=255)
                                                                                                                                                                                                                        ggCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCAACATCCGACCCAGAGCGGACTTTGGTTGTTTGACTGCGGTGa                                                           >  2:680373/1‑289 (MQ=255)
                                                                                                                                                                                                                         gCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCa                                                                                                     <  1:841441/246‑1 (MQ=255)
                                                                                                                                                                                                                             ttCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAAGGTAACGGCAATATGGCTTAACCTGCGAAATCAGACCCAGAGGTGACTTGGGTTGTTTGCCTACGGTGAAGGc                                                       >  2:1748644/1‑288 (MQ=255)
                                                                                                                                                                                                                               cTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCAACATCCGACCCAGAGCGGACTTTGGTTGTTTGACTGCGGTGAAGGCAcc                                                    <  1:1442157/289‑1 (MQ=255)
                                                                                                                                                                                                                                 gatCGACAACAAACGCCGCGATACTCAGTTGAAATAATGCATAAAGCTGTGGAAACG‑GTAATTCAGAGTGATGTAGTTCTTGCCATTCAATCATGATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGTAATAGTTTTTGAAACATGATTAACTCAAGGAATTAATTTTTTTAGGTAATTCAGCCGGTGTACCACGCCGGACGCGCAATGTGGCGGAAATATTGCTTAACCAGCAATATCCGACCCAGAGCGGACTTTGGTTGTTTGACTGCGGTGAAGGCAcccg                                                  <  2:1605423/287‑2 (MQ=255)
                                                                                                                                                                                                                                       caacaaACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCAACATCCGACCCAGAGCGGACTTTGGTTGTTTGACTGCGGTGAAGGCACCCAGCATCa                                            >  1:1708877/1‑289 (MQ=255)
                                                                                                                                                                                                                                          caaacaCCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCAACATCCGACCCAGAGCGGACTTTGGTTGTTTGACTGCGGTGAAGGCACCCAGCATc                                             <  1:699015/285‑1 (MQ=255)
                                                                                                                                                                                                                                                 cgcgCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCAACATCCGACCCAGAGCGGACTTTGGTTGTTTGACTGCGGTGAAGGCACCCAGCATCAGCTACTGCAt                                  >  1:586628/1‑289 (MQ=255)
                                                                                                                                                                                                                                                  gcgcAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCAACATCCGACCCAGAGCGGACTTTGGTTGTTTGACTGCGGTGAAGGCACCCAGCATCAGCTACTGCAt                                  >  1:78945/1‑288 (MQ=255)
                                                                                                                                                                                                                                                    gcAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCAACATCCGACCCAGAGCGGACTTTGGTTGTTTGACTGCGGTGAAGGCACCCAGCATCAGCTACTGCATAc                                <  1:1486129/288‑1 (MQ=255)
                                                                                                                                                                                                                                                             ttGTAATAAGGCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCa                                                                                                     <  2:709897/210‑1 (MQ=255)
                                                                                                                                                                                                                                                                      ggCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCAACATCCGACCCAGAGCGGACTTTGGTTGTTTGACTGCGGTGAAGGCAcc                                                    <  1:1929674/250‑1 (MQ=255)
                                                                                                                                                                                                                                                                       gCATAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCAACATCCCACCCAGAGCGGACTTTGGGTGTTCGACTCCGGTGAAGCCCACCAGCATCAGCCACTGCATACCGCCCTTAACCCTGGaag              >  2:2246962/1‑286 (MQ=255)
                                                                                                                                                                                                                                                                          tAAAGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCAACATCCTACCCAGAGCGGCCTTTGGTTGTTTGACTGCGGTGAAGCCACCTAGCATCAGCTACTGCATACCGCATTTACCCCTGGAAAACggg         >  2:347656/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                           aaaGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCAACATCCGACCCAGAGCGGACTTTGGTTGTTTGACTGc                                                                <  2:1291131/233‑1 (MQ=255)
                                                                                                                                                                                                                                                                           aaaGCTG‑GGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCAACATCCGACCCAGAGCGGACTTTGGTTGTTTGACTGCGGTGAAGGCACCCAGCATCAGCTACTGCATACCGCCTTTAACCCTGGAAAACTGGa        <  1:1614790/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                 g‑ggAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCAACATCCGACCCAGAGCGGACTTTGGTTGTTTGACTGCGGTGAAGGCAcc                                                    <  2:1157732/239‑1 (MQ=255)
                                                                                                                                                                                                                                                                                 g‑ggAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCAACATCCGACCCAGAGCGGACTTTGGTTGTTTGACTGCGGTGAAGGCAcc                                                    >  1:1157732/1‑239 (MQ=255)
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                       
AGTGATGCGTACATGTTTCGAGTGTTTTACTCATCAGCTGCTGCCCCACTTTTTCGCCACGCAACGCTTCACTGACAATCACCCGACCTATAACGACCGGCTCAAGATCATCATCACTTTTCAGAATCCTCGCATACGCCACCAGTTCATCATTTTTCCAACCGAGAATATGGCGATTATCCCCCGTCAAATCATCACCATCGATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTG‑GGAAACGCTTAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTAGTGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCAACATCCGACCCAGAGCGGACTTTGGTTGTTTGACTGCGGTGAAGGCACCCAGCATCAGCTACTGCATACCGCCTTTAACCCTGGAAAACTGGACAAGAT  >  CP042583/1952513‑1953074

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A