Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,962,863 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,962,8630GC99.2% 575.7 / NA 249intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (2/0);  new base C (113/133);  total (115/134)
Fisher's exact test for biased strand distribution p-value = 2.14e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,962,8640CG99.6% 585.9 / NA 249intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base G (115/133);  total (115/134)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01
*CP0425831,962,8650TA99.2% 577.5 / NA 249intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/1);  major base A (113/133);  minor base G (2/0);  total (115/134)
Fisher's exact test for biased strand distribution p-value = 2.14e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 249 total aligned reads displayed.

CAACGCGCATCAGCGGCGTAACGTCCATAGCGCCCGCCTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGGCTG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGGCTCATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGGCTATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAA  >  CP042583/1962586‑1963143
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                       
                cgTAACGTCCATAGCGCCCGCCTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAg                                                                                                                                                                                                                                                               >  2:884207/1‑289 (MQ=255)
                        ccATAGCGCCCGCCTGGCCAACAAACCAGAGCGAAAACAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCcag                                                                                                                                                                                                                                                       <  2:459981/289‑1 (MQ=255)
                            aGCGCCCGCCTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGt                                                                                                                                                                                                                                                   >  2:779779/1‑289 (MQ=255)
                            aGCGCCCGCCTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGACAATCGCGGAGTGCGAG‑GTATCAAGAATCGGCTGCGGAGAGAAACCcaggaat                                                                                                                                                                                                                                                   >  1:663444/1‑285 (MQ=255)
                                cccgccTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACCAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAACAGGCTGCGGATCGAACACCAGCAGTAccc                                                                                                                                                                                                                                               >  2:533022/1‑288 (MQ=255)
                                cccgccTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGCTAAAAGCCCAGCAGCACca                                                                                                                                                                                                                                               >  2:1627598/1‑289 (MQ=255)
                                cccgccTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACca                                                                                                                                                                                                                                               >  2:1341271/1‑289 (MQ=255)
                                  cgccTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACcagc                                                                                                                                                                                                                                             >  2:428831/1‑289 (MQ=255)
                                        gCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGTTATTGCCAAGCGCGGAGTGCGAG‑GTATCAAGAAGCGGCTGCAGATAAAAGCCCGGCCGTACcagcaagac                                                                                                                                                                                                                                        >  2:1955412/1‑284 (MQ=255)
                                           aacaaACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCaccacc                                                                                                                                                                                                                                    <  2:1047138/289‑1 (MQ=255)
                                             caaACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCca                                                                                                                                                                                                                                                        >  1:1921068/1‑267 (MQ=255)
                                                  ccaggCGAACCCAGGCCCGGGTTAAGACCAATAACCGGGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACa                                                                                                                                                                                                                             <  2:452141/285‑1 (MQ=255)
                                                  cAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACa                                                                                                                                                                                                                             <  1:1242607/289‑1 (MQ=255)
                                                  cAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACa                                                                                                                                                                                                                             <  1:1341271/289‑1 (MQ=255)
                                                  cAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACa                                                                                                                                                                                                                             <  1:760379/289‑1 (MQ=255)
                                                  cAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACa                                                                                                                                                                                                                             <  1:644212/289‑1 (MQ=255)
                                                  cAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATAAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACa                                                                                                                                                                                                                             <  1:411914/289‑1 (MQ=255)
                                                            ccAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATaaa                                                                                                                                                                                                                   >  1:1045867/1‑289 (MQ=255)
                                                                      gTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACg                                                                                                                                                                                                          <  1:891461/288‑1 (MQ=255)
                                                                             ccagaaaCCAAGAGCGGAGCGTTGAGGAAAGAATTGCGTGGCAACGCAATGGAGAGCATCACACCCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCATGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGGAGTAACGGAATTAACAAGCCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAgcgac                                                                                                                                                                                                   <  2:1411929/283‑5 (MQ=255)
                                                                                 tAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGAACCACCCCCAGCAACAGGATCATAACAAGCCCAACCAGCCACATcc                                                                                                                                                                                               >  2:1151511/1‑288 (MQ=255)
                                                                                      gagaGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCCCACGCAACCACATCCCTCGc                                                                                                                                                                                          >  2:1577986/1‑288 (MQ=255)
                                                                                       agagCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACa                                                                                                                                                                                                                             <  1:2022446/252‑1 (MQ=255)
                                                                                       agagCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACa                                                                                                                                                                                                                             >  2:2022446/1‑252 (MQ=255)
                                                                                              agcgtTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCctg                                                                                                                                                                                  >  1:637950/1‑288 (MQ=255)
                                                                                                  ttGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGACGCGACATCCCTGGCAGTTCctggctgg                                                                                                                                                                             >  1:1263181/1‑289 (MQ=255)
                                                                                                     aGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACg                                                                                                                                                                                                          >  2:630322/1‑257 (MQ=255)
                                                                                                     aGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCaa                                                                                                                                                                          >  1:2217839/1‑289 (MQ=255)
                                                                                                        aaaTGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATc                                                                                                                                                                        <  2:1749621/288‑1 (MQ=255)
                                                                                                         aaTGATTGCGTGGACACGCAAGGGAGAGCAGCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTGGCAGTGCGATCAGGTTTTGTGGAGTTAGTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGCACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCt                                                                                                                                                                       <  2:102259/288‑1 (MQ=255)
                                                                                                          aTGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCACGAATCGGCTGCGGATAGACGCCCAGCAGTACCAGCCGCACCACCAGAAACAGGATCATAAACAGCTCACGCAGAGACATCCCTGCGAGGTCccggctgggcatatg                                                                                                                                                                      >  2:1195740/1‑281 (MQ=255)
                                                                                                          aTGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGGGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGCTATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATACGCTGCGGGTAGAAGCCCAGCCGTACCAGCAGCACCACCAGCAACAGGAGCATAAACAGCTACCGGAGCGAAATCCCCGGCAGTTCCTGGCTGGCAATCTg                                                                                                                                                                      >  2:307180/1‑288 (MQ=255)
                                                                                                               tGCGTCGCCACGCAATGGAGAGCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAAt                                                                                                                                                                                                                                                                            <  1:522032/181‑1 (MQ=255)
                                                                                                                           cAATGTAGAGCAT‑GCAAGAACCACCCGTCAAGACGAGCATAAGCAACGGCAGCATTGAGATCAAGTTTTGTGACGTTATTGTCATGGCGAGTAACGGCATTGTAGTAGTATCCGGATTAACAAACCACTGCTGGATATCGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCGGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTAcc                                                                                                                                                       <  2:294802/286‑1 (MQ=255)
                                                                                                                                 agggCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAg                                                                                                                                               <  1:1084753/285‑1 (MQ=255)
                                                                                                                                 agacCATCACAACCACCG‑CCGTCTAGCCGACGATCAGCAACGGTAGCAGTGCGATCATGTTTTGTGGAGTTATTTTCATGGCGATTTACGGCCTTGTAGTAGGAACGCAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAg                                                                                                                                               <  1:54137/288‑1 (MQ=255)
                                                                                                                                   agCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAgcgc                                                                                                                                            >  1:680550/1‑289 (MQ=255)
                                                                                                                                   agCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAgcgc                                                                                                                                            >  1:1887008/1‑289 (MQ=255)
                                                                                                                                   agCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGATCACGCAGAGACCACCCTGGCAGTTCCTGGCTGGAAATCTGGCTTTTCGCTTTAcctagtgtagcg                                                                                                                                             >  2:2079702/1‑278 (MQ=255)
                                                                                                                                    gCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAgcg                                                                                                                                             <  1:2083521/287‑1 (MQ=255)
                                                                                                                                    gCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATAAGGTTTTGTTGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAgcg                                                                                                                                             <  1:778692/287‑1 (MQ=255)
                                                                                                                                        cacaACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACa                                                                                                                                                                                                                             >  1:960794/1‑203 (MQ=255)
                                                                                                                                        cacaACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGt                                                                                                                                       >  1:484203/1‑289 (MQ=255)
                                                                                                                                        cacaACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGt                                                                                                                                       >  1:301260/1‑289 (MQ=255)
                                                                                                                                        cacaACCACCA‑CCGTCAAGCCGAAGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTGACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACa                                                                                                                                                                                                                             <  1:1426837/203‑1 (MQ=255)
                                                                                                                                          caACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACa                                                                                                                                                                                                                             >  2:667069/1‑201 (MQ=255)
                                                                                                                                             ccacca‑ccGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCGGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACa                                                                                                                                   >  2:1811640/1‑288 (MQ=255)
                                                                                                                                             ccacca‑ccGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACa                                                                                                                                   >  1:807116/1‑288 (MQ=255)
                                                                                                                                                cca‑ccGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAgcg                                                                                                                                             <  1:1671220/275‑1 (MQ=255)
                                                                                                                                                     cGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCctggct                                                                                                                                                                               <  2:376638/237‑1 (MQ=255)
                                                                                                                                                     cGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCctggct                                                                                                                                                                               >  1:376638/1‑237 (MQ=255)
                                                                                                                                                             cgacgaTCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAgcgaataaa                                                                                                                    <  1:1286911/288‑9 (MQ=255)
                                                                                                                                                             cgacgaTCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAgcgaataaa                                                                                                                    <  2:2222560/288‑9 (MQ=255)
                                                                                                                                                              gacgaTCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACa                                                                                                                  <  2:947916/289‑1 (MQ=255)
                                                                                                                                                               acggTCAGCAAGGGTAGCAGGGGTATCAGGTTTTGGGGAGTTATTGTCAGGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAAGCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGTATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACa                                                                                                                  <  2:2032946/288‑1 (MQ=255)
                                                                                                                                                               acgaTCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAg                                                                                                                 >  2:1258769/1‑289 (MQ=255)
                                                                                                                                                                    cAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCa                                                                                                            <  1:1752533/289‑1 (MQ=255)
                                                                                                                                                                            gTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCa                                                                                                     >  2:955661/1‑288 (MQ=255)
                                                                                                                                                                            gTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCa                                                                                                     >  1:877152/1‑288 (MQ=255)
                                                                                                                                                                                 caggCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCAACAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCa                                                                                                <  1:1468896/285‑1 (MQ=255)
                                                                                                                                                                                 aGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAgcgaataaa                                                                                                                    <  1:2152415/268‑9 (MQ=255)
                                                                                                                                                                                 aGTGCGATCAGGTTGTGTGGAGTTATTGGCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCa                                                                                                <  1:1010845/288‑1 (MQ=255)
                                                                                                                                                                                  gTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAgcg                                                                                                                                             <  2:421823/242‑1 (MQ=255)
                                                                                                                                                                                  gTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAgcg                                                                                                                                             >  1:421823/1‑242 (MQ=255)
                                                                                                                                                                                    gCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCt                                                                                                                                                            <  1:2034072/225‑1 (MQ=255)
                                                                                                                                                                                      agcaaGGTTTTGTGGAGGTTTTTTCATGGCGGTTGACGGCCTTGTAGGAGTAACCGAATTAACAAACCACTGCTGGATACTGCCACTCGCGG‑GTTTCTGAGTATCCAGAATCGGCGGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTAACGCAGCGACATCCCTTGCAGTTCATGGCGTGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAAAATGGCCAGCGAATAAACAGATGTAAAGACCAGCCCAAGGGt                                                                                           <  2:793271/284‑1 (MQ=255)
                                                                                                                                                                                       aTCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAATGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAAACGATGCAAAAACCAACCCAAAgggaa                                                                                         >  2:1032785/1‑286 (MQ=255)
                                                                                                                                                                                          aGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGT‑AGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGAt                                                                                     <  1:1131018/289‑1 (MQ=255)
                                                                                                                                                                                             ttttGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCa                                                                                                <  1:1926056/276‑1 (MQ=255)
                                                                                                                                                                                             ttttGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCa                                                                                                >  2:1926056/1‑276 (MQ=255)
                                                                                                                                                                                              tttGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAATGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATaa                                                                                   <  1:1032785/288‑1 (MQ=255)
                                                                                                                                                                                                tgtgGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAg                                                                                                                                               >  2:64760/1‑226 (MQ=255)
                                                                                                                                                                                                  tgGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAg                                                                                                                                               <  2:166614/224‑1 (MQ=255)
                                                                                                                                                                                                   ggAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTa                                                                              <  1:1643388/288‑1 (MQ=255)
                                                                                                                                                                                                   gaaGTTATTGTCATGTCGATTTACAGCCTTGTAGTAGTAACGGAATTAACAAGCCGCTGCTGGATATTGCCACTCGCGGAGTGCGAG‑GAATCCAGAATCGGCTACGTATTGAAGCCCAGCAGTACCAGCAGCACCACCAACAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGACTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTa                                                                              <  2:1481778/286‑1 (MQ=255)
                                                                                                                                                                                                      gTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCa                                                                          >  2:517972/1‑289 (MQ=255)
                                                                                                                                                                                                      gTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGAACAGCCCAAAGGTAGAGATAACGGTaaac                                                                           >  1:583715/1‑286 (MQ=255)
                                                                                                                                                                                                       ttATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCa                                                                          >  1:446526/1‑288 (MQ=255)
                                                                                                                                                                                                            gTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTa                                                                    >  1:135639/1‑289 (MQ=255)
                                                                                                                                                                                                            gTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTa                                                                    <  1:1622569/289‑1 (MQ=255)
                                                                                                                                                                                                              cATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTAc                                                                   <  1:1181265/288‑1 (MQ=255)
                                                                                                                                                                                                               aTGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCca                                                                                                                                                                                                                                                        >  1:619114/1‑106 (MQ=255)
                                                                                                                                                                                                               aTGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAgcg                                                                                                                                             <  1:319724/213‑1 (MQ=255)
                                                                                                                                                                                                               aTGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCAACAGCAACCGGATCATAAACAGCTCACGCCGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTCACATCGCCCGCGAATAAACAGATGCAAAGACAAACCCAAAGGTAGGAATAACCGTACTAACCGGAACaa                                                                 >  2:487956/1‑289 (MQ=255)
                                                                                                                                                                                                                 ggCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGAc                                                                                                       <  2:1920738/249‑1 (MQ=255)
                                                                                                                                                                                                                     aTTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCa                                                                                                <  1:1855031/252‑1 (MQ=255)
                                                                                                                                                                                                                     aTTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGAACAGCCCa                                                                                                >  2:1855031/1‑252 (MQ=255)
                                                                                                                                                                                                                               ttGTAGTAGTAACGGAATTAACAAACACCGGCTGGCAATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGaa                                                 <  2:1067230/289‑1 (MQ=255)
                                                                                                                                                                                                                                tGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACa                                                                                                                                                                                                                             >  1:387233/1‑116 (MQ=255)
                                                                                                                                                                                                                                tGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAAc                                                >  1:953872/1‑289 (MQ=255)
                                                                                                                                                                                                                                          aCGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATaa                                      >  2:1875102/1‑289 (MQ=255)
                                                                                                                                                                                                                                          aCGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCACAAAGGTAGAGATAACGGTAATCACCGGTAc                                                                   >  2:851163/1‑260 (MQ=255)
                                                                                                                                                                                                                                           cGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCGAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCAGGAAGCTGCCGAACAAAATCAaaaa                                     >  2:385828/1‑289 (MQ=255)
                                                                                                                                                                                                                                            ggAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAAt                                    >  1:245933/1‑289 (MQ=255)
                                                                                                                                                                                                                                                  aaCAAACCACTGCTGGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCcg                              >  1:1485200/1‑289 (MQ=255)
                                                                                                                                                                                                                                                            tgctgGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCcg                              >  1:1477900/1‑279 (MQ=255)
                                                                                                                                                                                                                                                            tgctgGATATTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTAc                    <  1:1811388/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                   tatTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGCGACATCCCTGGCAGTTCATGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGAGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACAGGTACAACCTGGAAGCTGCCGAACAGAAGCATAAATTCGCCGACGAAGTTACCGGTGca             >  1:1581479/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                   tatTGCCAATCGCGGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAAAAGCTCAAGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAATAAACAGATGCAAAGACCAGCCCCAAGGTAGAGATAACGGTAATCACCGGTACAACCACGAAGCTGCCGAACAGAATCATAAAATTGCCGACGAAGATACAGGTGcc             >  2:111789/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                               cgGAGTGCGAG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCCCGCAGCGACATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGCGAAGAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCAGAACAGAATAATAAATTCCCAGCCGACATTACCGGTGCCACGCCACCCaa  >  2:2163385/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                       
CAACGCGCATCAGCGGCGTAACGTCCATAGCGCCCGCCTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCA‑CCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACGGCCTTGTAGTAGTAACGGAATTAACAAACCACTGCTGGATATTGCCAATCGCGGAGTGGCTG‑GTATCCAGAATCGGCTGCGGATAGAAGCCCAGCAGTACCAGCAGCACCACCAGCAACAGGATCATAAACAGCTCACGCAGGCTCATCCCTGGCAGTTCCTGGCTGGCAATCTGGCTTTTCGCTTTACCGAAGTAAGCGCGATGTAACATCGCCAGGCTATAAACAGATGCAAAGACCAGCCCAAAGGTAGAGATAACGGTAATCACCGGTACAACCTGGAAGCTGCCGAACAGAATCATAAATTCGCCGACGAAGTTACCGGTGCCAGGCATCCCAA  >  CP042583/1962586‑1963143

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A