Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A0 F0 I1 R1
|
4926 |
296.4 |
4517418 |
96.8% |
4372860 |
264.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,966,245 |
3 bp→CGA |
intergenic (–/–) |
– / – |
–/– |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,966,245 | 0 | G | C | 99.1%
| 507.4
/ NA
| 217 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base C (121/94); total (122/95) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
| * | CP042583 | 1,966,246 | 0 | C | G | 99.5%
| 499.8
/ NA
| 217 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base G (120/95); total (122/95) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,966,247 | 0 | T | A | 99.5%
| 507.0
/ NA
| 217 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (120/95); minor base G (1/0); total (122/95) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 217 total aligned reads displayed.
GAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACGCTGAGCATGGTCAGGCTCAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACGCTCATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCGCTGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACACTATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTGCCGCCGCGAGGCTGATGGC‑GAGAATGTACATCACCTGACCGTCGGTCTGGCCCCAGTAGCTTCCGGCGACCACGAAGGCCAGCGCGGAGGCGTTAATCATGATT > CP042583/1965966‑1966526
|||
aaCAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGttt > 1:819633/1‑288 (MQ=255)
ttGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAACACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACTGCGGCTGGCTGTATGTCTGCCCGCCGTTCGCGAAGAAATCAACGCCCATAAAGGCGGTTACCAGCGCAGCAAGGCCCACAGAGCCTACGCCGACGATCCGCGC‑GACGATTACAGag > 2:236297/1‑287 (MQ=255)
ggtaatgtaaaaagCGGGAGTCGCCCGCATAGCCGCGCATATACGAGAAGGCGTACATGTGATTGAGTAAACCCACACAAGCGACCACCGAGATCATGGTGTGCGACAGGCCGTCAAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAgc < 2:1678155/277‑1 (MQ=255)
gtAAGCGAACAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGGACATGTGAAGAAGGAAACCCACACCAGTCACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGGCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAgcg < 1:393980/288‑1 (MQ=255)
gCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCCCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCCCCAGGCCCACAGAGCCTACCACGACGAT‑CGCCGGCACGTCTTCAGCCCAGCGCCCa > 2:1560897/1‑288 (MQ=255)
agaagCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACGGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGga > 2:1007241/1‑289 (MQ=255)
cgcctTCACCGCGCATATACCAGGGGACGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGAc < 2:1219767/286‑1 (MQ=255)
ctTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAA‑CGCCGAGAAGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGTAGCACGaa > 2:922295/1‑289 (MQ=255)
ttCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGCAAACTCCCCGCAGGACaaa > 1:1438777/1‑288 (MQ=255)
cACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGcc > 1:1769844/1‑289 (MQ=255)
gcgcATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCCGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCCGCGAT‑CGCCGAGACGTCTTCAGACCAGCCCCAAC‑GGGAGAATGCCAGCAGGACGAACCcaagc > 2:692098/1‑287 (MQ=255)
tataCCGGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATgg < 1:1218252/289‑1 (MQ=255)
tataCCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATgg < 1:861644/289‑1 (MQ=255)
ggaggCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAACACCGATGTTAAAGTCGCCTACCCACATCCACGTCCCCAGCGGCTGGCTGTATGGCTGCGCGCCGTTAGCGCAGAAATCAACGCCGACAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCATACGACGCCGAT‑CGCCGAGACGTTTTCAGAACAGC‑CACACAGTGAGAATGCCCGCAGGTCGAACCCAAACAACGGCAAcata > 2:495681/1‑289 (MQ=255)
ggaggCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAaata > 1:2010524/1‑289 (MQ=255)
gaggCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAaataa > 1:933997/1‑289 (MQ=255)
aggCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACGGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAAACAATGGCAAaata < 1:1007241/287‑1 (MQ=255)
aggCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAaata < 1:36105/287‑1 (MQ=255)
gCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGa < 1:447706/262‑1 (MQ=255)
cGTACATGTGAATAAGGAAACCCATACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAACGCCGCCAGGCCCCCAGCCCCGACGCCGACGAA‑CGCCGAACCGTCTCCCGACCACCCCCCAC‑GGGAGAATGCCAGCCGGCCGCAGCCAAACAAAGGCAAAATAAGGGt > 2:5699/1‑289 (MQ=255)
cGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGccc < 2:1642214/241‑1 (MQ=255)
cGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGt > 2:582206/1‑289 (MQ=255)
cGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGt > 1:738836/1‑289 (MQ=255)
gAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCaa > 1:951693/1‑288 (MQ=255)
tAAGGAAACCCACACCAGTGACCA‑G‑AGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCa > 1:568485/1‑265 (MQ=255)
cacCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCgcgc < 1:1560897/289‑1 (MQ=255)
gTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCCCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAACGGTTAAGGCAAGCATGTTCATCAGCGCAgct > 2:634259/1‑288 (MQ=255)
tGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCAtctc > 1:157306/1‑288 (MQ=255)
tGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGCCTGCCCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGCAGAATGCCAGCAGAACGAGGCCAATCACTGGCTAAAGCAGGGCTAAGGCAAGCATGTTCATCCGCGCAtccc > 2:2208573/1‑286 (MQ=255)
accgagAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACtt > 1:1640012/6‑287 (MQ=255)
agAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GCGAGAAGGCCAGCAGGCCGAACCCAATCAAGGGCAAAATAATGGTTAAGGCCAGCATGCTCACCCGCCCACCCCACTTacttaa > 2:1450941/2‑285 (MQ=255)
agAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCAAC‑CGGAGAATGCCAGCAGTCCGAAGCCAATCCATGGCAACATAAGGGTTAAGGCACGCATGTTCATCCGAGCAtctcccctccttaa > 2:1309331/2‑279 (MQ=255)
aTGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTa > 1:1879137/1‑279 (MQ=255)
gcgacaggcCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGATGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAgg > 2:275125/5‑289 (MQ=255)
acagccCGTCCGCAACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACGGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGtt < 2:819633/287‑1 (MQ=255)
gcCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGc > 1:1612078/1‑289 (MQ=255)
gcCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGc > 2:89179/1‑289 (MQ=255)
gcCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTT‑CCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCaa > 1:1908877/1‑238 (MQ=255)
gcCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTT‑CCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCaa < 2:1908877/238‑1 (MQ=255)
cGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGcga < 1:2056345/289‑1 (MQ=255)
tCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCAGAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGACGGACGAAGCCAATCAATGGCAAAATAATGGGTAAGGCAAGCATGTTCATCCGCCCATCTCCCTTACTGAAACGATGTTCCGGATCGGGcgacg > 2:1343276/1‑289 (MQ=255)
aCCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAAGGCCAGCAGGACGAAGCCAACCAATGGCAAAATAATGGTGAAGGCAAGCATGGTCAACCGCGCATCTCACTTAATGAATAGAAGTTCAGGTTACGGCGACGACGGTg > 2:174834/1‑289 (MQ=255)
ggTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATgg < 1:397322/205‑1 (MQ=255)
ggTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAaataa > 1:780516/1‑213 (MQ=255)
ggTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAaataa < 2:780516/213‑1 (MQ=255)
ggTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTactgaatcg > 2:731833/1‑252 (MQ=255)
ggTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGt > 1:2200031/1‑289 (MQ=255)
ggTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCACGTTCATCCGCGCATCTCACTTACTTAATCGATGTTCAGGTTCTGGCCACGACGGTGAAGt > 2:1480457/1‑289 (MQ=255)
ggTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGAAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACTGCGGttgacg > 2:1062891/1‑284 (MQ=255)
gTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGt < 1:137831/288‑1 (MQ=255)
aaaCCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTgcag < 2:933997/289‑1 (MQ=255)
aaaCCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTgca > 1:1817696/1‑288 (MQ=255)
ccGTTGTTAACGGCGCCTCCCGACACCAACGTCCACAGCGGCTGGCTGTATGTCAGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTgcagcag < 2:1769844/289‑1 (MQ=255)
gATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTgcagcagca > 1:1939666/1‑289 (MQ=255)
aTGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATTGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTactgaat < 1:1825713/246‑6 (MQ=255)
tAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCAt < 2:1473350/228‑1 (MQ=255)
tAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCa < 2:738836/289‑1 (MQ=255)
ctccacccgacATCCACGTCCACGGCGTCTTGCTGTATGTCTGCTCGCCGGTAGCGAAGACATCAACGCCGATAAAGGCGGTTACCAGCCCCGCCAGGCCCGCAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCAGCCGCGCATCTCACTTACTGAAGCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCg < 1:236297/279‑1 (MQ=255)
cGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTgccg < 2:951693/289‑1 (MQ=255)
gTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAACATAAGGGTTCAGGCAAGCATGCTCATCCGCGCAACTCACTTACTGAATCCATGTTCAGGTTCTGGCGACGACCGTGAAGGTGCACTCGTAGCGCAACGCCGACATTCGCTTcgaccg > 2:1986687/1‑283 (MQ=255)
cacaGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCATGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGCCGTTTTCAGACCAGCGCCCAC‑GGGAAAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAAGCGATGTTCAGGTTCTGGGGACGACGGTGAATGTGCAGCAGCGGCGACACACCGAACCTCGCTTCCGCcaccgc > 2:606698/1‑289 (MQ=255)
aGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAgg > 2:656591/1‑263 (MQ=255)
aGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTGCCGCCGCGAg > 1:1067416/1‑289 (MQ=255)
aGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTGCCGCCGCGAg > 1:1125852/1‑289 (MQ=255)
tggctgTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTGCCGCCGCGAGGCTGa < 2:1125852/288‑1 (MQ=255)
ctgTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTGCCGCCGCGAGGCTGATgg < 2:1581980/288‑1 (MQ=255)
ggaTGTATGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTGCCGCCGCGAGGCTGATGGC‑ga < 2:2110909/287‑1 (MQ=255)
tGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTGCCGCCGCGAGGCTGATGGC‑GAGaa < 1:174834/289‑1 (MQ=255)
tGTCTGCCCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTGCCGCCGCGAGGCTGATGGC‑GAGaa < 1:692098/289‑1 (MQ=255)
tGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCa < 1:1757752/145‑1 (MQ=255)
tGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCAAGACGTTTTCAGACCAGCGCCCAC‑GGGCGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCCCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCCGCGCACGGCCGAGACTCGCTTCTGCCGCCGCCAGGCTG‑TGGCAGAGAATga > 2:1395063/1‑287 (MQ=255)
gCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTGCCGCCGCGAGGCTGATGGC‑GAGAATGTAc > 1:2018197/1‑289 (MQ=255)
cTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCCGCCGCCGCGAGGCTGATGGC‑GAGaagttaac > 2:1433236/1‑283 (MQ=255)
tCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTGCCGCCGCGAGGCTGATGGC‑GAGAATGTACa < 1:275125/288‑1 (MQ=255)
tCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCAACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTGCCGCCGCGAGGCTGATGGC‑GAGAATGTACAt < 2:1870852/289‑1 (MQ=255)
ccGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGGAAGGCCGATACTCGCTCCTTCCGCCGCGAGGCTGATGGC‑GAGAATGGAccatc > 2:1722168/1‑284 (MQ=255)
cGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTGCCGCCGCGAGGCTGATGGC‑GAGAATGTACATCAc > 1:590884/1‑288 (MQ=255)
gaagaaATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTGCCGCCGCGAGGCTGATGGC‑GAGAATGTACATCACCTGACCg < 1:1466419/288‑1 (MQ=255)
aaTCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTGCCGCCGCGAGGCTGATGGC‑GAGAATGTACATCACCTGACCGTCGGt < 1:966634/288‑1 (MQ=255)
aaTCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTGCCGCCGCGAGGCTGATGGC‑GAGAATGTACATCACCTGACCGTCGGt < 1:634259/288‑1 (MQ=255)
agcAACTCCGCTAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTGCCGCCGCGAGGCTGATGGC‑GAGAATGTACATCACCTGACCGTCGGTCt < 2:392928/287‑1 (MQ=255)
caCGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGGGCCGACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTGCCGCCGCGAGGCTGATGGC‑GAGAATGTACATCACCTGACCGTCGGTCTGGc < 2:2010524/288‑1 (MQ=255)
cGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCAt < 1:1286543/153‑1 (MQ=255)
cGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCAt > 2:1286543/1‑153 (MQ=255)
aTAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTGCCGCCGCGAGGCTGATGGC‑GAGAATGTACATCACCTGACCGTCGGTCTGGCCCCAGTa > 2:398593/1‑289 (MQ=255)
tAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTGCCGCCGCGAGGCTGATGGC‑GAGAATGTACATCACCTGACCGTCGGTCTGGCCCCAGTAg < 1:1722168/289‑1 (MQ=255)
ttACCAGCGCCGCCAGGCCCGCAGAGCCTACGCCGACGAT‑GGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGAAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTGCCGCCGCGAGGCTGATGGC‑GAGAATGTACATCACCTGACCGTCGGTCTGGCCCCAGTAGCTTCCGGc < 1:1091611/288‑1 (MQ=255)
ttACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCa < 2:1085092/105‑1 (MQ=255)
tACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTGCCGCCGCGAGGCTGATGGC‑GAGAATGTACATCACCTGACCGTCGGTCTGGGCACAGTAGCTTCCGGCg > 1:2237833/1‑288 (MQ=255)
gccgccAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTGCCGCCGCGAGGCTGATGGC‑GAGAATGTACATCACCTGACCGTCGGTCTGGCCCCAGTAGCTTCCGGCGACCACg < 1:1657027/287‑1 (MQ=255)
gccgccAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTGCCGCCGCGAGGCTGATGGC‑GAGAATGTACATCACCTGACCGTCGGTCTGGCCCCAGTAGCTTCCGGCGACCACg < 1:1309331/287‑1 (MQ=255)
ccAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTGCCGCCGCGCGGCTGATGGC‑GAGAATGTAACTCCCCTCACCGTCGGTCTGGCCCCAGGAGCTTCCGGCGACCCCGAAGGc > 2:1629886/1‑288 (MQ=255)
ccAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTGCCGCCGCGAGGCTGATGGC‑GAGAATGTACATCACCTGACCGTCGGTCTGGCCCCAGTAGCTTCCGGCGACCCCGAAGGc > 1:2158985/1‑288 (MQ=255)
ccAGGCCCACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTGCCGCCGCGAGGCTGATGGC‑GAGAATGTACATCACCTGACCGTCGGTCTGGCCCCAGTAGCTTCCGGCGACCACGCAGGc > 1:572593/1‑288 (MQ=255)
cccACAGAGCCTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCGGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTGCCGCCGCGAGGCTGATGGC‑GAGAATGTACATCACCTGACCGTCGGTCTGGCCCCAGTAGCTTCCGGCGACCACGAAGGCCAgcgc > 1:1253433/1‑289 (MQ=255)
ccTACGCCGACGAT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTGCCGCCGCGAGGCTGATGGC‑GAGAATGTACATCACCTGACCGTCGGTCTGGCCCCAGTAGCTTCCGGCGACCACGAAGGCCAGCGCGGAGGCGtt > 1:1027662/1‑289 (MQ=255)
cgacgaT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTGCCGCCGCGAGGCTGATGGC‑GAGAATGTACATCACCTGACCGTCGGTCTGGCCCCAGTAGCTTCCGGCGACCACGAAGGCCAGCGCGGAGGCGTTAATCATg < 2:2103708/289‑1 (MQ=255)
cgaT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTGCCGCCGCGAGGCTGATGGC‑GAGAATGTACATCACCTGACCGTCGGTCTGGCCCCAGTAGCTTCCGGCGACCACg < 1:2041333/259‑1 (MQ=255)
cgaT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTGCCGCCGCGAGGCTGATGGC‑GAGAATGTACATCACCTGACCGTCGGTCTGGCCCCAGTAGCTTCCGGCGACCACg > 2:2041333/1‑259 (MQ=255)
cgaT‑CGCCGAGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTGCCACCGCGAGTCTGACGGC‑GAGAAAGTACATCACCTGACAGTCGGTCGGGCCCCAGTAGCTTCCCGCGACCACGGAAGCCAGCCGGGTGTCGTTGATCagtatt > 2:2154636/1‑284 (MQ=255)
|||
GAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACGCTGAGCATGGTCAGGCTCAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACGCTCATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGAT‑CGCGCTGACGTTTTCAGACCAGCGCCCAC‑GGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACACTATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCGATACTCGCTTCTGCCGCCGCGAGGCTGATGGC‑GAGAATGTACATCACCTGACCGTCGGTCTGGCCCCAGTAGCTTCCGGCGACCACGAAGGCCAGCGCGGAGGCGTTAATCATGATT > CP042583/1965966‑1966526
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A