Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F210 I1 R1 4928 385.2 6658600 97.5% 6492135 231.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 556,090 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583556,0900AT99.7% 725.9 / NA 307intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (157/149);  minor base G (0/1);  total (157/150)
Fisher's exact test for biased strand distribution p-value = 4.89e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583556,0910CG99.7% 732.4 / NA 307intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base G (157/149);  total (157/150)
Fisher's exact test for biased strand distribution p-value = 4.89e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583556,0920TA98.7% 723.5 / NA 307intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (155/148);  minor base C (2/2);  total (157/150)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 307 total aligned reads displayed.

GGTGCATGGTACTATAAGTTTCTACACGGCTCACGGGCACAGTGGTGTTTCGTTCAATAATCGGGCTGAAAATGCCGGAAACGCCCTGGCGGTTAACTTCAACGCCCAAGCTGTAAGGGCAAATATCAGTGAGGATTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGACTCGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGCCAGCGAATGTGCAATGGGCTTTGATTGCTACATTTTGCCGCTTCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAA  >  CP042583/555813‑556369
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                      
   gCATGGTTGAATAAGTTTCTACACGCGACACGGGCACAGTGGTGTTTCGTTCAATAATCGGCGAGAAAATGCCGGAAACGCCCTGGCGGTTAACTTCAACGCCCAACGAGTAAGGGCAAATATCAGTGAGGATTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCTCCGCC‑aa                                                                                                                                                                                                                                                                            >  1:1753499/1‑288 (MQ=255)
   gCATGGTTGAATAAGTTTCTACACGCGACACGGGCACAGTGGTGTTTCGTTCAATAATCGGCGAGAAAATGCCGGAAACGCCCTGGCGGTTAACTTCAACGCCCAACGAGTAAGGGCAAATATCAGTGAGGATTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AAc                                                                                                                                                                                                                                                                           <  2:1839631/289‑1 (MQ=255)
         ttgaataAGTTTCTACACGCGACACGGGCACAGTGGTGTTTCGTTCAATAATCGGCGAGAAAATGCCGGAAACGCCCTGGCGGTTAACTTCAACGCCCAACGAGTAAGGGCAAATATCAGTGAGGATTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGcgccg                                                                                                                                                                                                                                                                                 <  1:1184845/274‑1 (MQ=255)
                     cTACACGCGACACGGGCACAGTGGTGTTTCGTTCAATAATCGGCGAGAAAATGCCGGAAACGCCCTGGCGGTTAACTTCAACGCCCAACGAGTAAGGGCAAATATCAGTGAGGATTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGAt                                                                                                                                                                                                                                                         <  1:516138/289‑1 (MQ=255)
                          cgcgacACGGGCACAGTGGTGTTTCGTTCAATAATCGGCGAGAAAATGCCGGAAACGCCCTGGCGGTTAACTTCAACGCCCAACGAGTAAGGGCAAATATCAGTGAGGATTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGAc                                                                                                                                                                                                                                                    <  1:3182035/284‑1 (MQ=255)
                           gcgacACGGGCACAGTGGTGTTTCGTTCAATAATCGGCGAGAAAATGCCGGAAACGCCCTGGCGGTTAACTTCAACGCCCAACGAGTAAGGGCAAATATCAGTGAGGATTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGAc                                                                                                                                                                                                                                                    >  2:2387296/5‑288 (MQ=255)
                             gacACGGGCACAGTGGTGTTTCGTTCAATAATCGGCGAGAAAATGCCGGAAACGCCCTGGCGGTTAACTTCAACGCCCAACGAGTAAGGGCAAATATCAGTGAGGATTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTc                                                                                                                                                                                                                                                  <  1:2683249/286‑1 (MQ=255)
                               cACGGGCACAGTGGTGTTTCGTTCAATAATCGGCGAGAAAATGCCGGAAACGCCCTGGCGGTTAACTTCAACGCCCAACGAGTAAGGGCAAATATCAGTGAGGATTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCgg                                                                                                                                                                                                                                                >  2:2416331/1‑288 (MQ=255)
                                       caGTGGTGTTTCGTTCAATAATCGGCGAGAAAATGCCGGAAACGCCCTGGCGGTTAACTTCAACGCCCAACGAGTAAGGGCAAATATCAGTGAGGATTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCCGCATTTGTGACGCGCCGCC‑AACCAGCACCACACTGTCGATTTGACCCGGCTTCAgcc                                                                                                                                                                                                                                        >  2:915948/1‑286 (MQ=255)
                                       caGTGGTGTTTCGTTCAATAATCGGCGAGAAAATGCCGGAAACGCCCTGGCGGTTAACTTCAACGCCCAACGAGTAAGGGCAAATATCAGTGAGGATTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATGTCTGCGCCCAGCGCGACAATGGTGCTCGGACCGTAACTTTTATACGGTAATTTGCCAAAACGAC‑GCACGGCGATTCGATGCACCAGCGGCACTTGTGACGTCCCGCCAAACAAGCACCA‑TCTGTTGATTTggcctccgttactac                                                                                                                                                                                                                                        >  2:3008917/1‑274 (MQ=255)
                                         gtggtgTTTCGTTCAATAATCGGCGAGAAAATGCCGGAAACGCCCTGGCGGTTAACTTCAACGCCCAACGAGTAAGGGCAAATATCAGTGAGGATTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGAc                                                                                                                                                                                                                                        >  1:89984/1‑286 (MQ=255)
                                         gtggggTTTCGTTCAATAATCGGCGAGAAAATGCCGGAAACGCCCTGGCGGTTAACTTCAACGCCCAACGAGTAAGGGCAAATATCAGTGAGGATTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCCGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAAACTGTCGATTTGCCTCCGCtcgagcccg                                                                                                                                                                                                                                      >  2:2030561/1‑280 (MQ=255)
                                           ggtgTTTCGTTCAATAATCGGCGAGAAAATGCCGGAAACGCCCTGGCGGTTAACTTCAACGCCCAACGAGTAAGGGCAAATATCAGTGAGGATTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGAcg                                                                                                                                                                                                                                       <  1:81161/285‑1 (MQ=255)
                                            gtgtTTCGTTCAATAATCGGCGAGAAAATGCCGGAAACGCCCTGGCGGTTAACTTCAACGCCCAACGAGTAAGGGCAAATATCAGTGAGGATTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AAc                                                                                                                                                                                                                                                                           >  2:478575/1‑248 (MQ=255)
                                                    ttCAATAATCGGCGAGAAAATGCCGGAAACGCCCTGGCGGTTAACTTCAACGCCCAACGAGTAAGGGCAAATATCAGTGAGGATTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCCTTTGTGACGcgccgc                                                                                                                                                                                                                                                                                >  2:3284976/1‑236 (MQ=255)
                                                    ttCAATAATCGGCGAGAAAATGCCGGAAACGCCCTGGCGGTTAACTTCAACGCCCAACGAGTAAGGGCAAATATCAGTGAGGATTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGcgccgc                                                                                                                                                                                                                                                                                <  1:3284976/236‑1 (MQ=255)
                                                    ttCAATAATCGGCGAGAAAATGCCGGAAACGCCCTGGCGGTTAACTTCAACGCCCAACGAGTAAGGGCAAATATCAGTGAGGATTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCAACAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCaa                                                                                                                                                                                                                           >  1:6883/1‑288 (MQ=255)
                                                        ataatCGCGCAGAAAGTGCCAGAAACCCCCTGGCGGTTAACTTCAACGCCCAACGGGTTAGGGCGAATATCAGGGAGGATTACCTCTTCAATATCTTCACTGCGTAAGCGGCGGGCGGCCTGGATTGCTGGGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAGACAGGC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCt                                                                                                                                                                                                                      <  2:569251/289‑1 (MQ=255)
                                                         taatCGGCGAGAAAATGCCGGAAACGCCCTGGCGGTTAACTTCAACGCCCAACGAGTAAGGGCAAATATCAGTGAGGATTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACg                                                                                                                                                                                                                         >  1:1509106/1‑285 (MQ=255)
                                                          aatcggcgagAAAATGCCGGAAACGCCCTGGCGGTTAACTTCAACGCCCAACGAGTAAGGGCAAATATCAGTGAGGATTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGt                                                                                                                                                                                                                    <  2:3212355/280‑1 (MQ=255)
                                                            tcggcgagAAAATGCCGGAAACGCCCTGGCGGTTAACTTCAACGCCCAACGAGTAAGGGCAAATATCAGTGAGGATTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCCAGCTGTCGATTTGACTCGGCTTCCGACCCGCATCCAGCAAcccccggtc                                                                                                                                                                                                                  >  2:602920/8‑284 (MQ=255)
                                                               gcgagAAAATGCCGGAAACGCCCTGGCGGTTAACTTCAACGCCCAACGAGTAAGGGCAAATATCAGTGAGGATTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGa                                                                                                                                                                                                                                                                 <  2:2788983/235‑1 (MQ=255)
                                                                cgagAAAATGCCGGAAACGCCCTGGCGGTTAACTTCAACGCCCAACGAGTAAGGGCAAATATCAGTGAGGATTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAAt                                                                                                                                                                                                               <  1:640978/285‑1 (MQ=255)
                                                                cgagAAAATGCCGGAAACGCCCTGGCGGTTAACTTCAACGCCCAACGAGTAAGGGCAAATATCAGTGAGGATTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAAt                                                                                                                                                                                                               <  1:2416331/285‑1 (MQ=255)
                                                                                           gtaaaCATCAACGCCCAACGAATAAGAGCAAATATCAGTGAGGAATACCTCTGCAATATCTTCACTACGTAAGCGGCAGGCGGCCTGAATTGCTGCGCCAAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCgg                                                                                                                                                                                    <  2:2292165/285‑1 (MQ=255)
                                                                                                                       cAAATATCAGTGAGGATTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGt                                                                                                                                                       >  1:288276/1‑289 (MQ=255)
                                                                                                                         aaTATCAGTGAGGATTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACaa                                                                                                                                                                           <  1:2027879/267‑1 (MQ=255)
                                                                                                                         aaTATCAGTGAGGATTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTaa                                                                                                                                                     >  1:1306814/1‑289 (MQ=255)
                                                                                                                         aaTATCAGTGAGGATTACCTCTTCAATATCTTCACTGCGCAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AAc                                                                                                                                                                                                                                                                           <  2:3119928/171‑1 (MQ=255)
                                                                                                                               aGTGAGGATTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AAc                                                                                                                                                                                                                                                                           <  2:1984656/165‑1 (MQ=255)
                                                                                                                               aGTGAGGATTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCa                                                                                                                                                                                                                                           <  1:2200614/197‑1 (MQ=255)
                                                                                                                                gTGAGGATTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTTGTAAAATTCGc                                                                                                                                              >  2:1071357/1‑289 (MQ=255)
                                                                                                                                gTGAGGATTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGc                                                                                                                                              >  1:2182392/1‑289 (MQ=255)
                                                                                                                                      tttACCTCGTCAATATCTGCACTGCGTAAGCGGCAGGCGGCCTTGATTGCTGCGCCTAGCGCGACAATGGTGCACGGAGCGTAACGTTGATCCGGTAATTTGCAAAACAGAC‑GCCCGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCGGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTccc                                                                                                                                        <  2:2731293/288‑1 (MQ=255)
                                                                                                                                      aTTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCATCACCAGACTGTCGATTTGACTCGGCTTCATACGCGCATCCCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCCACCACCAAGCTTCCCGTTCCTTCTCGTAAAATGCGCATTcc                                                                                                                                         >  2:2142866/1‑288 (MQ=255)
                                                                                                                                      aTTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTc                                                                                                                                                                                                                                                  >  1:1146799/1‑183 (MQ=255)
                                                                                                                                      aTTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTc                                                                                                                                                                                                                                                  <  2:1146799/183‑1 (MQ=255)
                                                                                                                                          ccTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGt                                                                                                                                    >  1:2393633/1‑289 (MQ=255)
                                                                                                                                           ctctTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGtt                                                                                                                                   <  1:204851/289‑1 (MQ=255)
                                                                                                                                            tctTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGttt                                                                                                                                  <  1:2604205/289‑1 (MQ=255)
                                                                                                                                               tCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AAc                                                                                                                                                                                                                                                                           >  2:2102163/1‑149 (MQ=255)
                                                                                                                                               tCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AAc                                                                                                                                                                                                                                                                           <  1:2102163/149‑1 (MQ=255)
                                                                                                                                               tCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCACGCGATTGAGCAGCGGCCACCCCAAATCTTCCCGTTCCTTCCCGTAAAATTCGCATTCCCCCGGttct                                                                                                                                >  2:2604205/1‑288 (MQ=255)
                                                                                                                                               tCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTttctt                                                                                                                               <  2:1188244/289‑1 (MQ=255)
                                                                                                                                               tCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTttct                                                                                                                                >  2:1496060/1‑288 (MQ=255)
                                                                                                                                               tCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTttct                                                                                                                                >  1:309854/1‑288 (MQ=255)
                                                                                                                                                cAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGATCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAACATTCGCATTTCAGCGTttctt                                                                                                                               >  1:2139076/1‑288 (MQ=255)
                                                                                                                                                   tatCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTCCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAAAAGAC‑GCACGGCGATTCGCTTCACCAGCGGCATTTGTGACGCCCCGCC‑AACCAGCACCAGACTTTCGATTTTTATCGGCTTCAGACGCGCATCGCGCACCGCCTGATCAACCGCCACTGCCCACCGATTGTTCAGCTGCATCCACCACTCTCCCAGCTCGTTCTCCTGAAACTCAACATCCAGCGTTTCGTcc                                                                                                                             >  2:3255696/1‑287 (MQ=255)
                                                                                                                                                     tCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGa                                                                                                                          >  1:1679098/1‑288 (MQ=255)
                                                                                                                                                      cTTCACTGCGTAGGCGGCAGGCGGCCTGCATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACCGGC‑GCACGGCGAGTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATa                                                                                                                        <  2:2523781/289‑1 (MQ=255)
                                                                                                                                                        tCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCgcgc                                                                                                                                                                                                                             <  1:230307/186‑1 (MQ=255)
                                                                                                                                                        tCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCgcgc                                                                                                                                                                                                                             >  2:230307/1‑186 (MQ=255)
                                                                                                                                                        tCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGttt                                                                                                                                  >  2:1035793/1‑277 (MQ=255)
                                                                                                                                                           cTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGcc                                                                                                                   <  1:1496060/289‑1 (MQ=255)
                                                                                                                                                           cTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGcc                                                                                                                   <  1:602920/289‑1 (MQ=255)
                                                                                                                                                             gCGTAGGCGGCAGGGGGCCGGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGCCAg                                                                                                                 <  2:1509106/289‑1 (MQ=255)
                                                                                                                                                             gCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGTTTCGCTGCCCCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGCCTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGCCAg                                                                                                                 <  1:2574326/289‑1 (MQ=255)
                                                                                                                                                             gCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGCCa                                                                                                                  >  1:93119/1‑288 (MQ=255)
                                                                                                                                                              cGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGCCAg                                                                                                                 <  2:1696087/288‑1 (MQ=255)
                                                                                                                                                              cGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGCCAGc                                                                                                                >  2:212986/1‑289 (MQ=255)
                                                                                                                                                                tAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCATACTTTCGATTTGACCCTGCTTCAGACGCCCCTCGCCCAACGCCTGTTCAACCGGCCCTCGCCAGCGCTTGAGCAGCGGCCACCACAACTCCTCCAGGTCGTTCTCGGAAAAATCGCATACCCGCGTGTCTTCCTgtaatcgcccgct                                                                                                               >  2:2199736/1‑276 (MQ=255)
                                                                                                                                                                      gCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACt                                                                                                                                                                                                                                                   <  1:1079105/150‑1 (MQ=255)
                                                                                                                                                                        aGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGc                                                                                                                                                                                   >  1:1060444/1‑212 (MQ=255)
                                                                                                                                                                        aGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTttcttc                                                                                                                              >  1:1375013/1‑265 (MQ=255)
                                                                                                                                                                        aGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGCCAg                                                                                                                 >  1:1251897/1‑278 (MQ=255)
                                                                                                                                                                        aGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGCCAGCGAATGTGCaa                                                                                                      >  1:2939130/1‑289 (MQ=255)
                                                                                                                                                                          gcggcCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTc                                                                                                                                                                                                       >  2:3135396/1‑190 (MQ=255)
                                                                                                                                                                                    ttGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGCCAGCGAATGTGCAATGGCgattgatt                                                                                          >  1:3044584/1‑289 (MQ=255)
                                                                                                                                                                                       ctgcGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGttt                                                                                                                                  <  1:3003412/246‑1 (MQ=255)
                                                                                                                                                                                                 cgcgAAAGTGGTGCTCGGGTCGTAACTTTGATGCGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGAACCGGCGGCATTGGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGCCAGCGAATGTGCAATGGCGATTGATTGCTACATTTTGc                                                                              <  2:949655/288‑1 (MQ=255)
                                                                                                                                                                                                  gcgACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGCCAGCGAATGTGCAATGGCGATTGATTGCTACATTTTGc                                                                              <  1:473464/287‑1 (MQ=255)
                                                                                                                                                                                                          ggTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGCCAGCGAATGTGCAATGGCGATTGATTGCTACATTTTGCCGCTTCcaca                                                                    <  1:2834396/289‑1 (MQ=255)
                                                                                                                                                                                                          ggTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGCCAGCGAATGTGCAATGGCGATTGATTGCTACATTTTGCCGCTTCcaca                                                                    <  1:1380260/289‑1 (MQ=255)
                                                                                                                                                                                                          ggTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGCCAGCGAATGTGCAATGGCGATTGATTGCTACATTTTGCCGCTTCcaca                                                                    <  1:3127001/289‑1 (MQ=255)
                                                                                                                                                                                                          ggTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGCCAGCGAATGTGCAATGGCGATTGATTGCTACATTTTGCCGCTTCcaca                                                                    <  1:669083/289‑1 (MQ=255)
                                                                                                                                                                                                           gTGCTCGGTTCGTAACTTTGATTCGGTAATTTGCCAAACAGAC‑GAACGGCGATTCGCGGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGCCAGCGAATGTGCAATGGCGATTGATTGCTACATTTTGCCGCTTCcaca                                                                    <  2:6883/288‑1 (MQ=255)
                                                                                                                                                                                                           gTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGttt                                                                                                                                  <  1:1803391/226‑1 (MQ=255)
                                                                                                                                                                                                             gCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGCCAGCGAATGTGCAATGGCGATTGATTGCTACATTTTGCCGCTTCcacaca                                                                  <  1:212986/288‑1 (MQ=255)
                                                                                                                                                                                                                  gATCGTAACGTTGGTACGGTAATTTAGC‑AACAGACGGAACGTCGATTCGCGGGACCGGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGCCTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGCCAGCGAATGTGCAATGGCGATTGATTGCTACATTTTGCCGCTTCCACACAGGCGt                                                             <  2:1783687/288‑1 (MQ=255)
                                                                                                                                                                                                                     cGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGCCAGCGAATGTGCAATGGCGATTGATTGCTACATTTTGCCGCTTCCACACAGGCGTACaa                                                         >  2:2920289/1‑289 (MQ=255)
                                                                                                                                                                                                                       tAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTc                                                                                                                                                                                                                                                  <  1:3208723/102‑1 (MQ=255)
                                                                                                                                                                                                                        aaCTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGGTTGAGCAGCGGCAACCACAAATCTTcc                                                                                                                                                                    >  2:650413/1‑179 (MQ=255)
                                                                                                                                                                                                                        aaCTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTccc                                                                                                                                        <  2:1927456/207‑1 (MQ=255)
                                                                                                                                                                                                                               aTACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGCCAGCGAATGTGCAATGGCGATTGATTGCTACAtttttc                                                                              >  2:3314994/1‑256 (MQ=255)
                                                                                                                                                                                                                               aTACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGCCAGCGAATGTGCAATGGCGATTGATTGCTACATTTTGCCGCTTCCACCACGGCGTACAAGGCTGCCAGt                                               >  2:2876138/1‑289 (MQ=255)
                                                                                                                                                                                                                               aTACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGCCAGCGAATGTGCAATGGCGATTGATTGCTACATTTTGCCGCTTCCACACAGGCGTACAAGGCTGCCAGt                                               >  1:2257522/1‑289 (MQ=255)
                                                                                                                                                                                                                                  cGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGAACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGCCAGCGAATGTGCAATGGCGATTGATTGCTACATTTTGCCGCTTCCACACAGGCGTACAAGGCTGCCAGTTCa                                            <  2:1476226/289‑1 (MQ=255)
                                                                                                                                                                                                                                         gtGCCAAACCGGC‑GCACCGCAACTGGCTGAACCAGCGGCAGTTGTCACGCGCCGCC‑AACCAGCCCCGGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGCCAGCGAATGTGCAATGGCGATTGATTGCTACATTTTGCCGCTTCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGt                                     <  2:1253292/288‑1 (MQ=255)
                                                                                                                                                                                                                                          tGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAACCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCGCGTAAACTTCCCATTCCCGCGTTTCTTCCTGATCCTGCCACCGAATTCGCAATGGCGACTGATTCCTACTTTTTGCCGCTTCCACCCCGCCCCACAAGGCTCCCAGTTCAatcccat                                     >  2:2577124/1‑284 (MQ=255)
                                                                                                                                                                                                                                               aaCAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGCCAGCGAATGTGCAATGGCGATTGATTGCTACATTTTGCCGCTTCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCg                               <  1:954160/289‑1 (MQ=255)
                                                                                                                                                                                                                                                    aC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGCCAGCGAATGTGCAATGGCGATTGATTGCTACATTTTGCCGCTTCcacac                                                                   <  1:2750772/248‑1 (MQ=255)
                                                                                                                                                                                                                                                     c‑GCACGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGCCAGCGAATGTGCAATGGCGATTGATTGCTACATTTTGCCGCTTCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTg                             <  1:3249906/285‑1 (MQ=255)
                                                                                                                                                                                                                                                          cGGCGATTCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACAGCCAGCGAATGTGCAATGGCGATTGATTGCTACATTTTGCCGCTTCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCg                               >  1:3317266/1‑279 (MQ=255)
                                                                                                                                                                                                                                                                 tCGCTGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGCCAGCGAATGTGCAATGGCGATTGATTGCTACATTTTGCCGCTTCCACACAGGCGTACAAg                                                        <  1:1940843/247‑1 (MQ=255)
                                                                                                                                                                                                                                                                     tGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGCCAGCGAATGTGCAATGGCGATTGATTGCTACATTTTGCCGCTTCCACACAGGCGTACAAGGCTGCCAGTTCAct                                          >  1:1606988/1‑257 (MQ=255)
                                                                                                                                                                                                                                                                     tGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGCCAGCGAATGTGCAATGGCGATTGATTGCTACATTTTGCCGCTTCCACACAGGCGTACAAGGCTGCCAGTTCAct                                          <  2:1606988/257‑1 (MQ=255)
                                                                                                                                                                                                                                                                     tGCACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGCCAGCGAATGTGCAATGGCGATTGATTGCTACATTTTGCCGCTTCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGc                     <  2:1375903/278‑1 (MQ=255)
                                                                                                                                                                                                                                                                       cACCAGCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATa                                                                                                                        >  2:225464/1‑177 (MQ=255)
                                                                                                                                                                                                                                                                            gCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCa                                                                                                                                                                                                    >  2:428953/1‑96 (MQ=255)
                                                                                                                                                                                                                                                                            gCGGCATTTGTGACGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGCCAGCGAATGTGCAATGGCGATTGATTGCTACATTTTGCCGCTTCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCg                               <  1:1001109/261‑1 (MQ=255)
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                      
GGTGCATGGTACTATAAGTTTCTACACGGCTCACGGGCACAGTGGTGTTTCGTTCAATAATCGGGCTGAAAATGCCGGAAACGCCCTGGCGGTTAACTTCAACGCCCAAGCTGTAAGGGCAAATATCAGTGAGGATTACCTCTTCAATATCTTCACTGCGTAAGCGGCAGGCGGCCTGGATTGCTGCGCCCAGCGCGACAATGGTGCTCGGATCGTAACTTTGATACGGTAATTTGCCAAACAGAC‑GCACGGCGATTCGCTGCACCAGCGGCATTTGACTCGCGCCGCC‑AACCAGCACCAGACTGTCGATTTGACTCGGCTTCAGACGCGCATCGCGCAACGCCTGTTCAATCGGCACTCGCAAGCGATTGAGCAGCGGCAACCACAAATCTTCCAGTTCGTTCTCGTAAAATTCGCATTCCCGCGTTTCTTCCTGATACTGCCAGCGAATGTGCAATGGGCTTTGATTGCTACATTTTGCCGCTTCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAA  >  CP042583/555813‑556369

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A