Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F210 I1 R1	4928	385.2	6658600	97.5%	6492135	231.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP042583	599,013	3 bp→CGA	intergenic (–/–)	– / –	–/–

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP042583	599,013	0	G	C	99.3%	636.4 / NA	271	intergenic (–/–)	–/–	–/–
Reads supporting (aligned to +/- strand): ref base G (1/1); new base C (119/148); total (121/150)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*	CP042583	599,014	0	C	G	98.5%	632.6 / NA	271	intergenic (–/–)	–/–	–/–
Reads supporting (aligned to +/- strand): ref base C (4/0); new base G (117/149); total (121/150)
Fisher's exact test for biased strand distribution p-value = 3.92e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*	CP042583	599,015	0	T	A	99.6%	637.9 / NA	271	intergenic (–/–)	–/–	–/–
Reads supporting (aligned to +/- strand): ref base T (1/0); new base A (119/150); total (121/150)
Fisher's exact test for biased strand distribution p-value = 4.44e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 271 total aligned reads displayed.

CCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCGCTTTCCCCGGTGATGGCGCTTTCATCG‑A‑CGCTTGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCAGACTGTTGGCCTGCGCTTTACTGCGGCCTTCTGCCAGCGCCTCGGCGAAATTAGCGAACAGTACGGTGATCCACAGCCAACCGCTAATGGCCGCGCTAAACAGCGCATTGCCGGG  >  CP042583/598733‑599294

|||

 ccACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCAcc                                                                                                                                                                                                                                                                                   >  1:1045453/1‑288 (MQ=255)

    cgcgGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCt                                                                                                                                                                                                                                                                               >  1:942650/1‑289 (MQ=255)

    cgcgGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCt                                                                                                                                                                                                                                                                               >  1:1452895/1‑289 (MQ=255)

        gAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCa                                                                                                                                                                                                                                                                            <  2:812812/288‑1 (MQ=255)

          aaaCGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAAt                                                                                                                                                                                                                                                                          <  1:1950105/288‑1 (MQ=255)

           aaCGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATaa                                                                                                                                                                                                                                                                        <  1:711902/289‑1 (MQ=255)

            aCGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAAc                                                                                                                                                                                                                                                                       <  1:264020/289‑1 (MQ=255)

               gcaccatggtgtgggTTGCCCATAAAAGGACGATAGTCAGGGCCATCAGAAGAATGTTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAAc                                                                                                                                                                                                                                                                       <  2:966611/273‑1 (MQ=255)

                 cacaGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCa                                                                                                                                                                                                                                                                   >  1:2950560/1‑288 (MQ=255)

                   caGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGACTGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGACGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCTGCCGGTGACGGAGGCAACAAAGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGAGTGAGCTTTCGTCG‑A‑CCGCTGCACCCCCGTCCATAACttacca                                                                                                                                                                                                                                                                 >  2:2318927/1‑284 (MQ=255)

                         ggCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCa                                                                                                                                                                                                                                                                <  1:1340528/283‑1 (MQ=255)

                         ggCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCa                                                                                                                                                                                                                                                           <  1:737488/288‑1 (MQ=255)

                                gCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGataa                                                                                                                                                                                                                                                   >  2:2717049/1‑289 (MQ=255)

                                gCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAAGCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATCCACCGCACACCGGTGCCGATTCCCCGGTGTTGCCGCTTTCCTCG‑ACCGCTT‑CACCCCCTTCAACAACTCCACCATCGACGGGGataa                                                                                                                                                                                                                                                   >  2:2356012/1‑289 (MQ=255)

                                   aGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGAAGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCCAGGCACCCCCCTCAATAACTTCACCATCGCAAGGGatccgg                                                                                                                                                                                                                                                 >  2:1340528/1‑284 (MQ=255)

                                      aaaaaGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGc                                                                                                                                                                                                                                             <  1:1881652/289‑1 (MQ=255)

                                      aaaaaGACGATAGTCAGGGCAATAAGCAGAATGGTCAGGTCAATTTCGTTCGGCTTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGc                                                                                                                                                                                                                                             <  1:84809/289‑1 (MQ=255)

                                                tAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTAc                                                                                                                                                                                                                                   <  1:3015888/289‑1 (MQ=255)

                                                 aGTCAGGGCAACGACGAGACTGGTCAAGGGGATTTCGTGCGGCGTTTTGCGTCGCTGTTCCCCCTCAACCATCGCGATCATCCGATCCACAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTAACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGAGGCGATTCCCCGGTCATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACGTCACCATCTCAGGGGATAATATCGCCAGCTTCTAc                                                                                                                                                                                                                                   <  2:1425501/288‑1 (MQ=255)

                                                  gTCCGGGCACTCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTAc                                                                                                                                                                                                                                   <  2:1021759/287‑1 (MQ=255)

                                                           aTCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGatat                                                                                                                                                                                                                        <  1:1363739/289‑1 (MQ=255)

                                                            tCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGatat                                                                                                                                                                                                                        >  1:327901/1‑288 (MQ=255)

                                                                 agAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGc                                                                                                                                                                                                                     <  2:1917748/286‑1 (MQ=255)

                                                                 agAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCtt                                                                                                                                                                                                                  >  1:1819695/1‑289 (MQ=255)

                                                                      ggTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGa                                                                                                                                                                                                             >  1:2732864/1‑289 (MQ=255)

                                                                            ggCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCCCCATCGCAGGGGATAATATCTCCAGCTTCTACCAGTACCATACCGCCTTTACGAAGTTgg                                                                                                                                                                                                       >  2:1565999/1‑289 (MQ=255)

                                                                                aTTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCgg                                                                                                                                                                                                   <  1:2085949/289‑1 (MQ=255)

                                                                                 tttCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACCCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGAAATCGCCTTTACGAAGTTGTTCGGc                                                                                                                                                                                                  >  1:1719395/1‑289 (MQ=255)

                                                                                      ttcgGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCa                                                                                                                                                                                                                                                           >  2:199940/1‑227 (MQ=255)

                                                                                      ttcgGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCt                                                                                                                                                                                                                                        >  2:3158460/1‑246 (MQ=255)

                                                                                                       cTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAgc                                                                                                                                                                             >  2:3182603/1‑288 (MQ=255)

                                                                                                          tgCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCCAACAGTACGATATCGCCTTTACGAAGTTGGCCGGCAGGAACTTTGTCCTCCCCAgccg                                                                                                                                                                           >  2:1283929/1‑285 (MQ=255)

                                                                                                                 tCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCa                                                                                                                                                                                                                                                           <  2:475630/200‑1 (MQ=255)

                                                                                                                 tCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGatat                                                                                                                                                                                                                        <  2:206157/235‑1 (MQ=255)

                                                                                                                    accaTCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAAt                                                                                                                                                                                                                                                                          >  1:777149/1‑182 (MQ=255)

                                                                                                                    accaTCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAAt                                                                                                                                                                                                                                                                          <  2:777149/182‑1 (MQ=255)

                                                                                                                         cgcgATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGt                                                                                                                                                                                                                               <  1:1769871/220‑1 (MQ=255)

                                                                                                                                  ccGATCCAGAAATGTCTCGTCGGGGTTAACGCTACACTCAATCACAAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGTTCACCGGTGCCGAGTCCCCGGTGATGAGGCGTTGATCG‑A‑CCCATGCACCCCCTTCAACAACATCACCATCGCAGGGGATCATATCGCCAGCTTCTCCCAATACGATAACGTATTTACGACGTCGGGACGCAGGCACTTTGTACGCCCACGCGACCTCTTTCGGCCCACGCCTCTTGccg                                                                                                                                                 >  2:1148009/1‑287 (MQ=255)

                                                                                                                                    gATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGc                                                                                                                                               >  1:1545804/1‑289 (MQ=255)

                                                                                                                                      tCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCAcc                                                                                                                                                                                                                                                                                   <  1:984505/155‑1 (MQ=255)

                                                                                                                                          gAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGTCCACGCCGCTTCTGGGCAAAggg                                                                                                                                         >  2:611942/1‑288 (MQ=255)

                                                                                                                                           aaaTGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAg                                                                                                                                           >  2:701160/1‑286 (MQ=255)

                                                                                                                                                tctcGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGtttt                                                                                                                                   >  1:544135/1‑289 (MQ=255)

                                                                                                                                                      ccgggTGAACGCTACACTCAAGCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGGGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCAc                                                                                                                             <  2:1719395/287‑1 (MQ=255)

                                                                                                                                                      cGGGGTTAACGCTCCACGCAAACACCAGCCAGTCAGAAAGAATACGCGTGGCGGCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCAc                                                                                                                             <  2:726857/289‑1 (MQ=255)

                                                                                                                                                          gTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCt                                                                                                                         >  1:2001792/1‑289 (MQ=255)

                                                                                                                                                              aCGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCa                                                                                                                     <  1:119495/289‑1 (MQ=255)

                                                                                                                                                                  tACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑TCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGc                                                                                                                                                                                                                                             >  2:1629746/1‑165 (MQ=255)

                                                                                                                                                                  tACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑TCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGc                                                                                                                                                                                                                                             <  1:1629746/165‑1 (MQ=255)

                                                                                                                                                                   acacTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTAc                                                                                                                                                                                                                                   <  2:2235708/174‑1 (MQ=255)

                                                                                                                                                                    cacTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTAc                                                                                                                                                                                                                                   >  1:351898/1‑173 (MQ=255)

                                                                                                                                                                    cacTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTAc                                                                                                                                                                                                                                   <  2:351898/173‑1 (MQ=255)

                                                                                                                                                                    cacTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAACGGCAGTTGTTTTCACCCTTTTCATACTGt                                                                                                               >  2:938286/1‑289 (MQ=255)

                                                                                                                                                                     acTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCt                                                                                                                                                                                                                                     >  2:2175182/1‑170 (MQ=255)

                                                                                                                                                                        cAATCACCAGCCCGTCAGAAGGAATACGGGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCAGACTGTTGGc                                                                                                           <  2:1816640/289‑1 (MQ=255)

                                                                                                                                                                        cAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCAGACTGTTGGc                                                                                                           <  2:2919497/289‑1 (MQ=255)

                                                                                                                                                                         aaTCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGCACTTTGTCCGCCGCAGCGCCATATTTCGTCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCCGACTGTTTGc                                                                                                           >  2:2666541/1‑288 (MQ=255)

                                                                                                                                                                         aaTCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCAccc                                                                                                                           >  2:299366/1‑272 (MQ=255)

                                                                                                                                                                         aaTCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCAGACTg                                                                                                                >  1:673615/1‑283 (MQ=255)

                                                                                                                                                                          aTCTCCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATaa                                                                                                                                                                                                                                                                        >  2:392174/1‑130 (MQ=255)

                                                                                                                                                                          aTCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAAGCGCCGCCGAGTTAACGTATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACAAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCTGGCAAAGGCAGTTTTTTTCACCCCTTTCAGACTGTTGGCCt                                                                                                         <  1:1148009/289‑1 (MQ=255)

                                                                                                                                                                           tCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGTAGGAACTTTGTCCGCCGCAg                                                                                                                                                                              <  2:1150907/219‑1 (MQ=255)

                                                                                                                                                                              ccagccagTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCCGGTTTTTTCACCCCTTTCAGACTGTTGGCCtcg                                                                                                       >  2:2149474/1‑285 (MQ=255)

                                                                                                                                                                               cagccagTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCt                                                                                                                                                                                                                                        >  2:3222097/1‑157 (MQ=255)

                                                                                                                                                                                     gTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCgg                                                                                                                                                                 >  1:457303/1‑222 (MQ=255)

                                                                                                                                                                                     gTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCAGACTGTTGGCCTGCGCTTTACt                                                                                               >  1:3216301/1‑288 (MQ=255)

                                                                                                                                                                                       cAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCAGACTGTTGGCCTGCGCTTTACTGCg                                                                                            <  1:2905377/289‑1 (MQ=255)

                                                                                                                                                                                                tACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCt                                                                                                                                                                                                                                        >  1:315377/1‑140 (MQ=255)

                                                                                                                                                                                                tACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCa                                                                                                                                                                                                 <  2:2810901/179‑1 (MQ=255)

                                                                                                                                                                                                tACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCa                                                                                                                                                                                                 >  1:2810901/1‑179 (MQ=255)

                                                                                                                                                                                                tACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCAGACTGTTGGCCTGCGCTTTACTGCGGCCTTCTg                                                                                    >  1:2468656/1‑288 (MQ=255)

                                                                                                                                                                                                    cgTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGataat                                                                                                                                                                                                                                                  <  1:3311566/126‑1 (MQ=255)

                                                                                                                                                                                                       gccgccGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCAGACTGTTGGCCTGCGCTTTACTGCGGCCTTCTGCCAgcgc                                                                             >  2:735233/1‑288 (MQ=255)

                                                                                                                                                                                                             ggTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCAGACTGTTGGCCTGCGCTTTACTGCGGCCTTCTGCCAGCGCCTCGGCg                                                                      >  1:2521565/1‑289 (MQ=255)

                                                                                                                                                                                                               tGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCAGACTGTTGGCCTGCGCTTTACTGCGGCCTTCTGCCAGCGCCTCGGCGa                                                                     <  2:2521565/288‑1 (MQ=255)

                                                                                                                                                                                                                 aCGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCAGACTGTTTGCCTGCGCTTTACTGCGGCCTTCTGCCAGCGCCCCGCCGAAAt                                                                  >  2:1390518/1‑289 (MQ=255)

                                                                                                                                                                                                                      ggCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCAGACTGTTGGCCTGCGCTTTACTGCGGCCTTCTGCCAGCGCCTCGGCGAAATTcgcg                                                             >  1:1976621/1‑289 (MQ=255)

                                                                                                                                                                                                                      ggCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCAGACTGTTGGCCTGCGCTTTACTGCGGCCTTCTGCCAGCGCCTCGGCGAAATTAGc                                                              <  2:1545804/288‑1 (MQ=255)

                                                                                                                                                                                                                      ggCAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCAGACTGTTGGCCTGCGCTTTACTGCGGCCTTCTGCCAGCGCCTCGGCGAAATTAGc                                                              <  1:2346158/288‑1 (MQ=255)

                                                                                                                                                                                                                       gccaactcgcgcccgGATTCGCGCATCCACGGTGCCGATTCCCCGGTGATGGCGCCTTCATCGCA‑CG‑ATGCACCCCCTTCAATAACGTCACCATCGGAAGGGATAATATCGCCAGCTTCTACCAGTGCGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCAGACTGTTGGCCTGCGCTTTACTGCGGCCTTCTGCCAGCGCCTCGGCGAAATTAGCg                                                             <  2:286804/276‑1 (MQ=255)

                                                                                                                                                                                                                        cAAAATCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCAGACTGTTGGCCTGCGCTTTACTGCGGCCTTCTGCCAGCGCCTCGGCGAAATTAGCGa                                                            >  1:116223/1‑288 (MQ=255)

                                                                                                                                                                                                                         aaaaTCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCAGACTGTTGGCCTGCGCTTTACTGCGGCCTTCTGCCAGCGCCTCGGCGAAATTAGCGaa                                                           <  1:1557229/288‑1 (MQ=255)

                                                                                                                                                                                                                         aaaaTCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCAGACTGTTGGCCTGCGCTTTACTGCGGCCTTCTGCCAGCGCCTCGGCGAAATTAGCGaa                                                           <  1:3182603/288‑1 (MQ=255)

                                                                                                                                                                                                                         aaaaTCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCAGACTGTTGGCCTGCGCTTTACTGCGGCCTTCTGCCAGCGCCTCGGCGAAATTAGCGaa                                                           <  1:1802981/288‑1 (MQ=255)

                                                                                                                                                                                                                         aaaaTCGCCGCCGGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTAACAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCAGACTGTTGGCCTGCGCTTTACTGCGGCCTTCTGCCAGCGCCTCGGCGAAATTAGCGaa                                                           <  1:1283929/288‑1 (MQ=255)

                                                                                                                                                                                                                                 cgccgGATTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCAGACTGTTGGCCTGCGCTTTACTGCGGCCTTCTGCCAGCGCCTCGGCGAAATTAGCGAACAGTACgg                                                   <  1:2318927/288‑1 (MQ=255)

                                                                                                                                                                                                                                       aTTCACGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGATGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCATCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCAGACTGTTGGCCTGCGCTTTACTGCGGCCTTCTGCCAGCGCCTCGGCGAAATTAGCGaa                                                           <  1:2512055/274‑1 (MQ=255)

                                                                                                                                                                                                                                            cGGATCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCAGACTGTTGGCCTGCGCTTTACTGCGGCCTTCTGCCAGCGCCTCGGCGAAATTAGCGAACAGTACGGTGATCCACAGcc                                       <  1:1004692/289‑1 (MQ=255)

                                                                                                                                                                                                                                               aTCACCGGTGCCGATTCCCCGGTGATGGCGCTTTAATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCAGACTGTTGGCCTGCGCTTTACTGCGGCCTTCTGCCAGCGCCTCGGCGAAATTAGCGAACAGTACGGt                                                  <  1:333630/275‑1 (MQ=255)

                                                                                                                                                                                                                                                tCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCAGACTGTTGGCCTGCGCTTTACTGCGGCCTTCTGCCAGCGCCTCGGCGAAATTAGGGAACAGTACGGTGATCCACAg                                         <  2:2571389/283‑1 (MQ=255)

                                                                                                                                                                                                                                                tCACCGGTGCCGATTCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCAGACTGTTGGCCTGCGCTTTACTGCGGCCTTCTGCCAGCGCCTCGGCGAAATTAGGGAACAGTACGGTGATCCACAg                                         >  1:2571389/1‑283 (MQ=255)

                                                                                                                                                                                                                                                            attCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCAGACTGTTGGCCTGCGCTTTACTGCGGCCTTCTTCCAGCGCCTCGGCGAAATTAGCGAACAGTACGGTCATCCACAGCCACCCGCTAATGGCcgc                       >  1:2197063/2‑289 (MQ=255)

                                                                                                                                                                                                                                                            attCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCAGACTGTTGGCCTGCGCTTTACTGCGGCCTTCTGCCAGCGCCTCGGCGAAATTAGCGAACAGTACGGTGATCCACAGCCAACCGCCAATGGCcg                        >  2:2486270/2‑288 (MQ=255)

                                                                                                                                                                                                                                                            attCCCCGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCACCAGCTTCTACCAATACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGACGCAGCGCCATATTTCGGCTCACGTAACTTGCGGGCAAAGGCAGTTTTTTTCGCCCCTTTGTGCTTGTTGGCCGGTGCTTTCCTGCGGCCTTCTGCCAGCGCATGGCGGAACTGAGCGACAAGTACGGTGACCCCCAGCCAAcacagaacgcccg                        >  2:1213723/2‑276 (MQ=255)

                                                                                                                                                                                                                                                                 ccGGTGATGGCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCAGACTGTTGGCCTGCGCTTTACTGCGGCCTTCTGCCAGCGCCTCGGCGAAATTAGCGaa                                                           <  1:2704824/248‑1 (MQ=255)

                                                                                                                                                                                                                                                                         ggCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCa                                                                                                                                                                               <  2:1493543/124‑1 (MQ=255)

                                                                                                                                                                                                                                                                         ggCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCAGACTGTTGGc                                                                                                           >  1:201073/1‑192 (MQ=255)

                                                                                                                                                                                                                                                                         ggCGCTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGGTTTTTTCACCCCTTTCAGACTGTTGGCCTGCGATTTACTGCGGCCGTGTGCCAGCGCCTCGGCGAAATTAGCGAACAGTACGGTGCTCGACAGCCAATCGCTAATGGGCGCCGTAAAGAGCGCa          >  2:1066865/1‑289 (MQ=255)

                                                                                                                                                                                                                                                                          gcgcTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCg                                                                                                                                                                  >  1:1394889/1‑136 (MQ=255)

                                                                                                                                                                                                                                                                          gcgcTTTCATCG‑A‑CCGATGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCa                                                                                                                     >  2:1778069/1‑181 (MQ=255)

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CCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTTCGTTCGGCGTTTTGCGTCGCTGTGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGATCACCGGTGCGCTTTCCCCGGTGATGGCGCTTTCATCG‑A‑CGCTTGCACCCCCTTCAATAACTTCACCATCGCAGGGGATAATATCGCCAGCTTCTACCAGTACGATATCGCCTTTACGAAGTTGGTCGGCAGGAACTTTGTCCGCCGCAGCGCCATATTTCGGCTCACGCAGCTTGCGGGCAAAGGCAGTTTTTTTCACCCCTTTCAGACTGTTGGCCTGCGCTTTACTGCGGCCTTCTGCCAGCGCCTCGGCGAAATTAGCGAACAGTACGGTGATCCACAGCCAACCGCTAATGGCCGCGCTAAACAGCGCATTGCCGGG  >  CP042583/598733‑599294

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 9 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A