Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F210 I1 R1 4928 385.2 6658600 97.5% 6492135 231.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 645,258 3 bp→TCA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583645,2580AT100.0% 998.8 / NA 412intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (206/206);  total (206/206)
*CP042583645,2590GC100.0% 992.0 / NA 412intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (206/206);  total (206/206)
*CP042583645,2600TA99.8% 989.9 / NA 412intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base A (205/206);  total (206/206)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 412 total aligned reads displayed.

GTTAAGCATTGATGAAAAAGCGTATTACCGCGAGAAGATAAAACGTCTGCTAAAAGAACGTAAT‑GCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTAGTCTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTAGTAGCATTGCCGTCGAACTTATTGATCATCTTGATAGTTTGGGTGAAAAAATCATCTGGGCACCCGACAAACATCTGGGGCGTTACGTGCAAAAACAGACGGGTGGAGACATTCTATGCTGGCAGGGTGCCTGTATTGTGCATGATGAATTTAA  >  CP042583/644978‑645538
                                                                                                                                                                                                                                                                                             |||                                                                                                                                                                                                                                                                                      
 ttAAGCATTGATGAAAAAGCGTATTACCGCGAGAAGATAAAACGTCTGCTAAAAGAACGTAAT‑GCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGAt                                                                                                                                                                                                                                                                                  >  2:3285069/1‑288 (MQ=255)
         tgatgaAAAAGCGTATTACCGCGAGAAGATAAAACGTCTGCTAAAAGAACGTAAT‑GCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTg                                                                                                                                                                                                                                                                          >  2:2365658/1‑288 (MQ=255)
          gatgaAAAAGCGTATTACCGCGAGAAGATAAAACGTCTGCTAAAAGAACGTAAT‑GCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGcc                                                                                                                                                                                                                                                                        <  2:3302016/289‑1 (MQ=255)
          gaggaaacaggagaTTACCGGAAAAAGACAAAACTCCTCCCATAAGAACGTAAA‑TCGGTGATGGTTGCCCACTACACTACCGCGCCCGACATCCACAACCG‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGT‑AGCAAAGCACCCCGCTGCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGcc                                                                                                                                                                                                                                                                        <  2:1068491/276‑1 (MQ=255)
                      tATTACCGCGAGAAGATAAAACGTCTGCTAAAAGAACGTAAT‑GCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCACGCTGAATGATCACTTGATCTCGGCGGCCCCGTTGAAAAAt                                                                                                                                                                                                                                                            >  2:3149934/1‑289 (MQ=255)
                         tACCGCGAGAAGATAAAACGTCTGCTAAAAGAACGTAAT‑GCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCACGCTGCTAC‑TTTGTTAGTCGCGGGGGTGAGATTTAGGGG‑AGAAACAGCCAAAATTCTCAGTCCGGAAAAACCAATTCTGATGCCGACACTTCAGGCTGAATGTTCTCTGGATCTCGGCTGCCCGGTTAAAGAATTTa                                                                                                                                                                                                                                                         >  2:293067/1‑289 (MQ=255)
                          aCCGCGAGAAGATAAAACGTCTGCTAAAAGAACGTAAT‑GCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTaa                                                                                                                                                                                                                                                        <  1:2281961/289‑1 (MQ=255)
                              cgAGAAGATAAAACGTCTGCTAAAAGAACGTAAT‑GCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCa                                                                                                                                                                                                                                                    >  1:1827714/1‑289 (MQ=255)
                                     caaaaaGGTCTGTTAAAA‑AAAGTAATGGCGGTG‑TGGGTTCCCACCTCTATACCCATCCCGGAATTCAACAAATGGGAAGAGAAAACGGGTGGCTTTATTT‑TGGTTCTTTTGGAATTGGGCGGTTTGGTTGCAAA‑CATCCCCCTTTTTCTTTTGTTA‑TCCCCTGGGTTAGGATTATGGGAAGAAACGCCAAAAATTTCCGGTCCGGAAAAACAATTTCTG‑TTCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGa                                                                                                                                                                                                                                            <  2:74196/287‑1 (MQ=255)
                                      tAAAACGTCTGCTAAAAGAACGTAAT‑GCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGc                                                                                                                                                                                                                                              <  1:718095/287‑1 (MQ=255)
                                               tGCTAAAAGAACGTAAT‑GCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATc                                                                                                                                                                                                                                    >  1:770571/1‑288 (MQ=255)
                                               tGCTAAAAGAACGTAAT‑GCGGTGATGGTTGACCACTACTATACCGATCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATcc                                                                                                                                                                                                                                   <  1:3149934/289‑1 (MQ=255)
                                                  tAAAAGAACGTAAT‑GCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGa                                                                                                                                                                                                                                <  1:3292274/289‑1 (MQ=255)
                                                      aGAACGTAAT‑GCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGt                                                                                                                                                                                                                            >  2:1035031/1‑289 (MQ=255)
                                                         aCGTAAT‑GCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTa                                                                                                                                                                                                                           <  1:2932781/287‑1 (MQ=255)
                                                           gTAAT‑TCGGTGATGGTTGCCCACTCCTATACCCATCCCGGAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTa                                                                                                                                                                                                                           <  2:3059157/285‑1 (MQ=255)
                                                             aaT‑GCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTgtcg                                                                                                                                                                                                                     <  1:2365658/289‑1 (MQ=255)
                                                                            tGCCCACTACTATACCGATCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAac                                                                                                                                                                                                       >  1:2674336/1‑289 (MQ=255)
                                                                              cccACTACTATACCGATCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAac                                                                                                                                                                                                       >  1:299614/1‑287 (MQ=255)
                                                                                    actaTACCGATCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTctgc                                                                                                                                                                                               <  2:2587374/289‑1 (MQ=255)
                                                                                      tataCCGATCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTctgctg                                                                                                                                                                                             <  1:559811/289‑1 (MQ=255)
                                                                                        taCCGATCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCg                                                                                                                                                                                           >  1:2727566/1‑289 (MQ=255)
                                                                                        taCCGATCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCg                                                                                                                                                                                           >  1:1200221/1‑289 (MQ=255)
                                                                                             aTCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAATATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATg                                                                                                                                                                                                                                          <  1:1971996/237‑1 (MQ=255)
                                                                                             aTCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGATACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTctgctg                                                                                                                                                                                             >  2:421565/1‑282 (MQ=255)
                                                                                             aTCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTg                                                                                                                                                                                                                                                                          <  1:2122076/205‑1 (MQ=255)
                                                                                             aTCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCg                                                                                                                                                                                                                                             >  1:1727255/1‑234 (MQ=255)
                                                                                             aTCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCg                                                                                                                                                                                                                                             <  1:1033610/234‑1 (MQ=255)
                                                                                             aTCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTctgctg                                                                                                                                                                                             <  1:421565/282‑1 (MQ=255)
                                                                                             aTCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTaaa                                                                                                                                                                                      >  1:279580/1‑289 (MQ=255)
                                                                                             aTCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTaaa                                                                                                                                                                                      >  2:575105/1‑289 (MQ=255)
                                                                                             aTCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTaaa                                                                                                                                                                                      >  2:202310/1‑289 (MQ=255)
                                                                                             aTCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTaaa                                                                                                                                                                                      >  1:2161847/1‑289 (MQ=255)
                                                                                             aTCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTaaa                                                                                                                                                                                      >  2:797793/1‑289 (MQ=255)
                                                                                             aTCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTaaa                                                                                                                                                                                      >  1:1166854/1‑289 (MQ=255)
                                                                                             aTCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTaaa                                                                                                                                                                                      >  1:1921612/1‑289 (MQ=255)
                                                                                             aTCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTaaa                                                                                                                                                                                      >  1:1292969/1‑289 (MQ=255)
                                                                                             aTCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGACCGGAAAAAAGAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTaaa                                                                                                                                                                                      >  1:2033085/1‑289 (MQ=255)
                                                                                             aTCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTGATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGATTGTTCACTGGATCTCGGCTGCCCTGTGGAAGAATTTAACGCATTGTGCGATGCCCATCCCGATCCTCCTGTCGTCGTCTACGCCAAGTCTTCTGCTACGCTaaa                                                                                                                                                                                      >  2:2151380/1‑289 (MQ=255)
                                                                                               cccGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCt                                                                                                                                                                                                                                                                           <  1:1615079/202‑1 (MQ=255)
                                                                                               cccGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCt                                                                                                                                                                                                                                                                           >  2:1615079/1‑202 (MQ=255)
                                                                                               cccGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTaaaa                                                                                                                                                                                     >  1:980353/1‑288 (MQ=255)
                                                                                               cccGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTaaaa                                                                                                                                                                                     >  1:706065/1‑288 (MQ=255)
                                                                                               cccGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTaaaa                                                                                                                                                                                     >  2:1575568/1‑288 (MQ=255)
                                                                                               cccGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCAATCCGGTCGTACTGTCGTTGTCTACGCCAACACCTCTGCTGCGATaaacg                                                                                                                                                                                    >  2:1799512/1‑287 (MQ=255)
                                                                                                ccGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAgc                                                                                                                                                                                   >  2:609958/1‑289 (MQ=255)
                                                                                                    aaTTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAgcgcgc                                                                                                                                                                               >  1:2508701/1‑289 (MQ=255)
                                                                                                              cT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGAt                                                                                                                                                                                                                                                                                  >  1:593913/1‑180 (MQ=255)
                                                                                                                  gCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGggtgg                                                                                                                                                                  >  2:2810392/1‑289 (MQ=255)
                                                                                                                    agaagaAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGGGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGggtggt                                                                                                                                                                 <  1:850777/288‑1 (MQ=255)
                                                                                                                                tGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCAtt                                                                                                                                                    >  2:2423523/1‑289 (MQ=255)
                                                                                                                                      tATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTc                                                                                                                                              <  2:706065/289‑1 (MQ=255)
                                                                                                                                            tGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCa                                                                                                                                                                                                                                      >  2:2248819/1‑195 (MQ=255)
                                                                                                                                              aTTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGcc                                                                                                                                                                                                                                                                        >  1:1061930/1‑159 (MQ=255)
                                                                                                                                              aTTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGt                                                                                                                                               >  1:316880/1‑280 (MQ=255)
                                                                                                                                                    tGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTATTGatca                                                                                                                                <  1:1005727/289‑1 (MQ=255)
                                                                                                                                                         aTGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTATTGATCATCTTg                                                                                                                           <  1:485831/289‑1 (MQ=255)
                                                                                                                                                          tGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTATTGATCATCTTGa                                                                                                                          <  1:1781597/289‑1 (MQ=255)
                                                                                                                                                            gcgcgcTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTa                                                                                                                                                                                                                           >  1:1869271/1‑190 (MQ=255)
                                                                                                                                                                  ttCGG‑TGCACAGCATCCCGCTTATAC‑TTGGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCCCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTATTGATCATCTTGATAGTTTgg                                                                                                                  <  2:1898253/289‑1 (MQ=255)
                                                                                                                                                                     gg‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTATTGATCATCTTGATAGTTTGGGTg                                                                                                               <  2:299614/289‑1 (MQ=255)
                                                                                                                                                                             aGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATccc                                                                                                                                                                                                                                  <  2:1675291/167‑1 (MQ=255)
                                                                                                                                                                             aGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTa                                                                                                                                                                                                                           <  2:2182800/174‑1 (MQ=255)
                                                                                                                                                                             aGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTa                                                                                                                                                                                                                           >  1:2182800/1‑174 (MQ=255)
                                                                                                                                                                             aGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGAt                                                                                                                                                                         >  1:2627029/1‑224 (MQ=255)
                                                                                                                                                                                  cccGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTATCGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTATTGATCATCTTGATAGTTTGGGTGAAAAAatca                                                                                                      >  1:998425/1‑286 (MQ=255)
                                                                                                                                                                                  cccGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTATTGATCATCTTGATAGTTTGGGTGAAAAAatca                                                                                                      >  2:547459/1‑286 (MQ=255)
                                                                                                                                                                                  cccGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTATTGATCATCTTGATAGTTTGGGTGAAAAAATCATCt                                                                                                   <  1:1099369/289‑1 (MQ=255)
                                                                                                                                                                                         cTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTATTGATCATCTTGATAGTTTGGGTGAAAAAATCATCTGGGCAcc                                                                                            <  1:2423523/289‑1 (MQ=255)
                                                                                                                                                                                            c‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGa                                                                                                                                                                          <  2:1317958/208‑1 (MQ=255)
                                                                                                                                                                                                tGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTTAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTa                                                                                                                                                                                                                           >  2:1737932/1‑156 (MQ=255)
                                                                                                                                                                                                 gTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGcc                                                                                                                                                                                                          >  2:1468106/1‑172 (MQ=255)
                                                                                                                                                                                                       cGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTATTGATCATCTTGATAGTTTGGGTGAAAAAATCATCTGGGCACCCGACAAACATCt                                                                                <  2:266199/288‑1 (MQ=255)
                                                                                                                                                                                                          tGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTATTGATCATCTTGATAGTTTGGGTGAAAAAATCATCTGGGCACCCGACa                                                                                       >  2:1715266/1‑278 (MQ=255)
                                                                                                                                                                                                          tGGGGTGAGACTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTATTGATCATCTTGATAGTTTGGGTGAAAAAATCATCTGGGCACCCGACAAACATCTgggg                                                                            >  2:651939/1‑289 (MQ=255)
                                                                                                                                                                                                            gggTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTCTTGATCATCTTGATAGTTTGGTGGAAAAAATCATCTGGGCCCCCGACAAAAATATGGGGCg                                                                          >  2:2533002/1‑289 (MQ=255)
                                                                                                                                                                                                                gagaTTTATGGG‑ACAAACAGCCAAAATTCTCCGTCCGGACAAACCAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTATTGATCATCTTGATAGTTTGGGTGAAAAAATCATCTGGGCACCCGACAAACATCTGGGGCGTTa                                                                       <  2:2727566/288‑1 (MQ=255)
                                                                                                                                                                                                                 agaTTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTATTGATCATCTTGATAGTTTGGGTGAAAAAATCATCTGGGCACCCGACAAACATCTGGGGCGTTACg                                                                     >  1:3056602/1‑289 (MQ=255)
                                                                                                                                                                                                                   aTTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGACTGGGTGGTACCTTCAAGCATTGCCGTCGAACTTATTGATCATCTTGATAGTTTGGGTGAAAAAATCATCGGGGCACCCGACAAAAATCTGGCGCGTTACGt                                                                    >  2:397066/1‑288 (MQ=255)
                                                                                                                                                                                                                       aTGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAg                                                                                                                                                                                    <  2:94661/172‑1 (MQ=255)
                                                                                                                                                                                                                       aTGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAg                                                                                                                                                                                    >  1:94661/1‑172 (MQ=255)
                                                                                                                                                                                                                        tGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTATTGat                                                                                                                                  <  2:1219149/221‑1 (MQ=255)
                                                                                                                                                                                                                        tGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTATTGATCATCTTGATAGTTTGGGTGAAAAAATCATCTGGGCACCCGACAAACATCt                                                                                <  2:1101369/271‑1 (MQ=255)
                                                                                                                                                                                                                        tGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTATTGATCATCTTGATAGTTTGGGTGAAAAAATCATCTGGGCACCCGACAAACATCTGGGGCGTTACGTGCaaaa                                                              >  2:452689/1‑289 (MQ=255)
                                                                                                                                                                                                                               aaaCCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTATTGATCATCTTGATAGTTTGGGTGAAAAAATCATCTGGGCACCCGACAAACATCTGGGGCGTTACGTGCAAAAACAGAc                                                        >  2:230796/1‑289 (MQ=255)
                                                                                                                                                                                                                                  ccGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTATTGATCATCTTGATAGTTTGGGTGAAAAAATCATCTGGGCACCCGACAAACATCTGGGGCGTTACGTGCAAAAACAGACggg                                                     <  1:629565/289‑1 (MQ=255)
                                                                                                                                                                                                                                  ccGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTATTGATCATCTTGATAGTTTGGGTGAAAAAATCATCTGGGCACCCGACAAACATCTGGGGCGTTACGTGCAAAAACAGACggg                                                     <  1:443846/289‑1 (MQ=255)
                                                                                                                                                                                                                                                     ggAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTATTGATCATCTTGATAGTTTGGGTGAAAAAATCATCTGGGCACCCGACAAACATCTGGGGCGTTACGTGCAAAAACAGACggg                                                     <  1:1403478/270‑1 (MQ=255)
                                                                                                                                                                                                                                                     ggAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTATTGATCATCTTGATAGTTTGGGTGAAAAAATCATCTGGGCACCCGACAAACATCTGGGGCGTTACGTGCAAAAACAGACggg                                                     >  2:1403478/1‑270 (MQ=255)
                                                                                                                                                                                                                                                        aaaaaCAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTATTGATCATCTTGATAGTTTGGGTGAAAAAATCATCTGGGCACCCGACAAACATCTGGGGCGTTACGTGCAAAAACAGACGGGTGGAGACATTCTATGCTGGCAg                               <  1:1671930/289‑1 (MQ=255)
                                                                                                                                                                                                                                                        aaaaaCAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAAGTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTATTGATCATCTTGATAGTTTGGGTGAAAAAATCATCTGGGCACCCGACAAACATCTGGGGCGTTACGTGCAAAAACAGACGGGTGGAGACATTCTATGCTGGCAg                               <  1:1533962/289‑1 (MQ=255)
                                                                                                                                                                                                                                                          aaaCAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTATTGATCATCTTGATAGTTTGGGTGAAAAAATCATCTGGGCACCCGACAAACATCTGGGGCGTTACGTGCAAAAACAGACGGGTGGAGACATTCTATGCTGGCAggg                             <  1:3321981/289‑1 (MQ=255)
                                                                                                                                                                                                                                                            aCAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCCACACTTCTGCTGCGGTAAAAGCGCGCTCCGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTCCTGATCATCTTGATAGTTTGGGTGAAAAAATCATCTGGGCACCCCAACACCATCTGGGGCGTTAAGTGCAAAAAACAACAGGTGTAGCCATTCTATTCTggacggct                            >  2:1839892/1‑282 (MQ=255)
                                                                                                                                                                                                                                                                  cTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTATTGATCATCTTGATAGTTTGGGTGAAAAAATCATCTGGGCACCCGACAAACATCTGGGGCGTTACGTGCAAAAACAGACGGGTGGAGACATTCTATGCTGGCAGGGTGCCTGTa                     <  2:1970652/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                     aTGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTATTGATCATCTTGATAGTTTGGGTGAAAAAATCATCTGGGCACCCGACAAACATCTGGGGCGTTACGTGCAAAAACAGACGGGTGGAGACATTCTATGCTGGCAGGGTGCCt                        <  1:2866647/283‑1 (MQ=255)
                                                                                                                                                                                                                                                                     aTGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTATTGATCATCTTGATAGTTTGGGTGAAAAAATCATCTGGGCACCCGACAAACATCTGGGGCGTTACGTGCAAAAACAGACGGGTGGAGACATTCTATGCTGGCAGGGTGCCt                        >  2:2866647/1‑283 (MQ=255)
                                                                                                                                                                                                                                                                          gACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTATTGat                                                                                                                                  >  2:1173666/1‑172 (MQ=255)
                                                                                                                                                                                                                                                                          gACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTATTGATCATCTTGATAGTTTGGGTGAAAAAATCATCTGGGCACCCGACAAACATCTGGGGCGTTACGTGCAAAAACAGACGGGTGGAGACATTCTATGCTGGCAGGGTGCCTGTATTGTGCat             >  1:1330159/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                 cAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTa                                                                                                                                       >  1:1692963/1‑160 (MQ=255)
                                                                                                                                                                                                                                                                                  aGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGggtggt                                                                                                                                                                 >  1:158679/1‑133 (MQ=255)
                                                                                                                                                                                                                                                                                             |||                                                                                                                                                                                                                                                                                      
GTTAAGCATTGATGAAAAAGCGTATTACCGCGAGAAGATAAAACGTCTGCTAAAAGAACGTAAT‑GCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACT‑GGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGG‑TGCAAAGCATCCCGCTTCTAC‑TTTGTTAGTCGCTGGGGTGAGATTTATGGG‑AGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTAGTCTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTAGTAGCATTGCCGTCGAACTTATTGATCATCTTGATAGTTTGGGTGAAAAAATCATCTGGGCACCCGACAAACATCTGGGGCGTTACGTGCAAAAACAGACGGGTGGAGACATTCTATGCTGGCAGGGTGCCTGTATTGTGCATGATGAATTTAA  >  CP042583/644978‑645538

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A