Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F210 I1 R1 4928 385.2 6658600 97.5% 6492135 231.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 690,919 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583690,9190GC98.5% 627.2 / ‑5.9 272intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (4/0);  new base C (138/129);  total (142/130)
Fisher's exact test for biased strand distribution p-value = 1.24e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01
*CP042583690,9200CG98.2% 625.3 / 0.3 272intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (138/129);  minor base A (4/1);  total (142/130)
Fisher's exact test for biased strand distribution p-value = 3.73e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP042583690,9210TA98.2% 620.9 / ‑6.5 272intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (5/0);  new base A (137/129);  total (142/130)
Fisher's exact test for biased strand distribution p-value = 6.16e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 272 total aligned reads displayed.

CTGGCGCGCTTTACCGGAACTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTGCTTTTACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑GCTTTCGCTGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTACGCTTTTCCCCTGAATCATGCCGTCGCTGACCTGCGGCAGTTTCAAGGCGCGTTGCAACAGTTTGCGGTTGCCCTCGTGTGGACTGGTCATCAGAAAGCTGCGTCCGGCCATGGTTTGTGTCAGGGCTTTTGGTT  >  CP042583/690649‑691196
                                                                                                                                                                                                                                                                                |||                                                                                                                                                                                                                                                                                   
cTGGCGCGCTTTACCGGAACTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCGATTTACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGc                                                                                                                                                                                                                                                                      >  2:1299606/1‑288 (MQ=255)
                   ctctctTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCGATTTACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATaa                                                                                                                                                                                                                                                  >  1:770382/1‑289 (MQ=255)
                     ctctTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCGATTTACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGGCGATTCCGAT‑GTTCCGCCACCGCCCATCAAATCAATaaa                                                                                                                                                                                                                                                 >  2:3317854/1‑288 (MQ=255)
                     ctctTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCGATTTACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAAc                                                                                                                                                                                                                                                >  2:2718281/1‑289 (MQ=255)
                        tttCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCGATTTACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCa                                                                                                                                                                                                                                             >  1:1373106/1‑289 (MQ=255)
                                ccatccCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCGATTTACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGTTTCCGAGGTTCCGGCCCCGCCCAGCAACTCACTCAACGCATCTTCaaa                                                                                                                                                                                                                                     >  2:151262/1‑289 (MQ=255)
                                 catccCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCGATTTACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCaaaa                                                                                                                                                                                                                                    <  1:3216568/289‑1 (MQ=255)
                                  atccCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCGATTTACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCaaaa                                                                                                                                                                                                                                    >  1:2160831/1‑288 (MQ=255)
                                    ccccAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCGATTTACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAAcgc                                                                                                                                                                                                                                 >  1:1629678/1‑289 (MQ=255)
                                    ccccAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCGATTTACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCAACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGTAAATCAATAAACGCATCTTCAAAAcgc                                                                                                                                                                                                                                 >  1:969623/1‑289 (MQ=255)
                                        aGCACCAGCGCCTGGCCGGAAGACGGCACCAGCAAACCGCACATCATCTTAAAGGCGGTCGATTTACCCGCCCCGTTTGGCCCCAGCAAACCAAACATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTCCCTTCTACCGTACGTAATATTGCGCCCAGCTG‑CGATGCCGAGGCTCCGGCACCACGCAGCCAATCAATAACCCCATCTTCAAAActccgc                                                                                                                                                                                                                              >  2:1593978/1‑283 (MQ=255)
                                           aCCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCGATTTACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAGAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACgcggcg                                                                                                                                                                                                                             <  2:389144/286‑1 (MQ=255)
                                           aCCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCGATTTACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACgcggcg                                                                                                                                                                                                                             <  1:2425907/286‑1 (MQ=255)
                                                 gcCTGGCCGGAACGCAGCACCAGACAACCTCAACTCATCTTAAAGGGTGTCGCTCTCCCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACTTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCgt                                                                                                                                                                                                                    <  2:342648/289‑1 (MQ=255)
                                                       ccGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCGATTTACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCgttgatg                                                                                                                                                                                                               <  1:151666/288‑1 (MQ=255)
                                                       ccGGAAGTCGGCACCAGAAATCCGCACATCCTCTTAAAGGTGGTCGATTTACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCgttgatg                                                                                                                                                                                                               <  2:1492919/288‑1 (MQ=255)
                                                              tCGGCACCAGCCAACCGCACAGCCTCTTAAAGGTGGTGGCTTTACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGAttt                                                                                                                                                                                                        <  2:3018662/288‑1 (MQ=255)
                                                                     cAGCAAACCGCACATCATCTTAAAGGTGGTCGATTTACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCa                                                                                                                                                                                                                                                                     <  1:3025294/220‑1 (MQ=255)
                                                                             cgcccgtcaccTTAAAGGTGGTCGCTTTACCCGGGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCCCGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGc                                                                                                                                                                                        <  2:1931244/283‑1 (MQ=255)
                                                                             cGCACATCATCTTAAAGGTGGTCGATTTACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGc                                                                                                                                                                                        <  1:3086869/289‑1 (MQ=255)
                                                                             cGCACATCATCTTAAAGGTGGTCGATTTACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGc                                                                                                                                                                                        <  1:278592/289‑1 (MQ=255)
                                                                               cacaTCATCTTAAAGGTGGTCGATTTACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCAt                                                                                                                                                                                      >  1:3201674/1‑289 (MQ=255)
                                                                                  atcatcTTAAAGGTGGTCGATTTACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGctggat                                                                                                                                                                                   >  2:1744329/1‑284 (MQ=255)
                                                                                    catcTTAAAGGTGGTCACTTTACCCGCGCCGTTTGGCCCCGGCAAACCAAAAATCTCCCCACGTTTACCGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTTAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGa                                                                                                                                                                                 <  2:3201674/289‑1 (MQ=255)
                                                                                      tcTTAAAGGTGGTCGATTTACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCACTAAACGCATCTTCAAAACGCGGCGTCGTCTCGTTGATGTTGATTTCCGGCATCCCTCCGGCATGGCGAat                                                                                                                                                                               >  2:2570918/1‑289 (MQ=255)
                                                                                                ggtcgatttACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAACATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGgt                                                                                                                                                                     <  1:1845789/283‑1 (MQ=255)
                                                                                                ggtcgatttACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCCAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTTAATTTTCTTTCCGGCATCCCTTCGGCTAGCGGAATATCGTCTGgt                                                                                                                                                                     >  2:1884544/7‑289 (MQ=255)
                                                                                                 gtcgatttACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCATCGG‑CGATTCCGAGGTTCCGGCCCCGCCCAGCAAATCAATAAACGCATCCTCAAAACGCGGCGTACTTTCGTTGATGTTGATTTCCGCCCTCCCGTCGGCCTGGCTAATATctgtgggtt                                                                                                                                                                    >  2:2922308/6‑281 (MQ=255)
                                                                                                 gtcgatttACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGcc                                                                                                                                                                                                                                                                <  2:1204165/192‑1 (MQ=255)
                                                                                                 gtcgatttACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCa                                                                                                                                                                                                                                                           >  2:2287763/6‑202 (MQ=255)
                                                                                                 gtcgatttACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCa                                                                                                                                                                                                                                                           <  1:2287763/197‑1 (MQ=255)
                                                                                                 gtcgatttACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCTGCATGGCGAATATCGTCTGgtt                                                                                                                                                                    >  1:1246583/6‑288 (MQ=255)
                                                                                                 gtcgatttACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGc                                                                                                                                                                                        >  2:458144/6‑269 (MQ=255)
                                                                                                 gtcgatttACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGc                                                                                                                                                                                        >  1:223659/6‑269 (MQ=255)
                                                                                                 gtcgatttACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGc                                                                                                                                                                                        <  1:458144/264‑1 (MQ=255)
                                                                                                 gtcgatttACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGgtg                                                                                                                                                                    >  2:1052398/6‑289 (MQ=255)
                                                                                                 gtcgatttACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGgtg                                                                                                                                                                    >  2:2212557/6‑289 (MQ=255)
                                                                                                 gtcgatttACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGgtg                                                                                                                                                                    >  1:1498235/6‑289 (MQ=255)
                                                                                                 gtcgatttACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAAATTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCCGCGGCGATTCCGC‑GGTTCCGGCCCCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCCGCGTAGATTCGTTGATGTTGATTTCGGGCACCCCGTCGGCATGGCGAATATCGCCTgttt                                                                                                                                                                    >  2:2455746/6‑286 (MQ=255)
                                                                                                  tcgatttACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCTG‑CGATTCAGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGGAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGgtgg                                                                                                                                                                   >  1:804793/5‑288 (MQ=255)
                                                                                                         aCCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCctct                                                                                                                                                            >  2:268644/1‑289 (MQ=255)
                                                                                                              cgcCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCAt                                                                                                                                                                                                 >  1:1885657/1‑247 (MQ=255)
                                                                                                              cgcCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATccc                                                                                                                                                                                              >  2:2142229/1‑250 (MQ=255)
                                                                                                                   tttGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAAcg                                                                                                                                                                                                                                  <  2:1545898/209‑1 (MQ=255)
                                                                                                                   tttGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAAcg                                                                                                                                                                                                                                  >  1:1545898/1‑209 (MQ=255)
                                                                                                                   tttGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGc                                                                                                                                                                                        >  1:2303855/1‑251 (MQ=255)
                                                                                                                             gCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTTGTGTGGCCTCTTTTTTGAGGATCAGACGTa                                                                                                                                         >  1:3144515/1‑288 (MQ=255)
                                                                                                                             gCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTa                                                                                                                                         >  1:658567/1‑288 (MQ=255)
                                                                                                                               aaaCCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGCTCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTa                                                                                                                                         <  2:1038345/286‑1 (MQ=255)
                                                                                                                                 aCCAAAACTCTCCCCACGTTTAACGGCAAAGTAGCCGTGATCTGTGGCGGCAAAATCACCAAATTTCTTGGTCAGTTCTTTCGCTTCGCT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTAGGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGGCCAGAAAATCAATAAACGCATCTGCAGAGCGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTAccgat                                                                                                                                    <  2:2352640/289‑5 (MQ=255)
                                                                                                                                 aCCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTAccgat                                                                                                                                    <  1:2718281/289‑5 (MQ=255)
                                                                                                                                 aCCAAAAATCTCCCCACGTTGAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTAccgat                                                                                                                                    <  1:1962554/289‑5 (MQ=255)
                                                                                                                                                 cGTTTAACGGCAACGGTGACGTCATCGGTGGCAGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTACCGATTTCCCCTGAATCATGc                                                                                                                    <  2:1999691/289‑1 (MQ=255)
                                                                                                                                                       aCGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACgcggc                                                                                                                                                                                                                              >  1:1581278/1‑177 (MQ=255)
                                                                                                                                                       aCGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACgcggc                                                                                                                                                                                                                              <  2:1581278/177‑1 (MQ=255)
                                                                                                                                                       aCGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGc                                                                                                                                                                                        >  1:866028/1‑215 (MQ=255)
                                                                                                                                                                 tGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTACCGATTTCCCCTGAATCATGCCGTCGCTGACCTGCgg                                                                                                    <  2:665063/289‑1 (MQ=255)
                                                                                                                                                                   aCGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTACCGATTTCCCCTGAATCATGCCGTCGCTGACCTGCGGcc                                                                                                  >  1:240694/1‑288 (MQ=255)
                                                                                                                                                                          cGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTACCGATTTccc                                                                                                                               <  1:2640769/253‑1 (MQ=255)
                                                                                                                                                                              ggcggcAACATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTACCGATTTCCCCTGAATCATGCCGTCGCTGACCTGCGGCAGTTTCAAGgcg                                                                                       <  2:2045826/289‑1 (MQ=255)
                                                                                                                                                                              ggcggcAAAATCCCCCAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTACCGATTTCCCCTGAATCATGCCGTCGCTGACCTGCGGCAGTTTCAAGgcg                                                                                       <  1:248848/289‑1 (MQ=255)
                                                                                                                                                                              ggcggcAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTACCGATTTCCCCTGAATCATGCCGTCGCTGACCTGCGGCAGTTTCAAGgcg                                                                                       <  1:1052398/289‑1 (MQ=255)
                                                                                                                                                                               gcggccagaggcccAATTGTCTGTGTCAGGTCTTGTGCGTCGAC‑AACCGTCGCGCCGGGTGTGCCTTCTACCGTCTGTACTGTTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCCTCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTACCGATTTCCCCTGAATCATGCCGTCGCTGACCTGCGGCAGTTTCAAGgcg                                                                                       <  2:3144515/277‑1 (MQ=255)
                                                                                                                                                                                                     tGGTCAGTTTGTACGCTTCGATCCACGGTC‑CGCCCGGTGTGCGTTCTACCGTATTTAAGATTGCCCCCAGCGG‑TGATTCCGAGGTGCCGGCTGCGCCCACGAAATCAATAAACGCATCTTTGAAACGCGGCGTAGGTTCGTTGATGTGGATTTCCGGCATGCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTGTTTGTTGAGTATCAGACGTACCGATTTCCCCTGAATCATGCCGTCGCTGACCTGCGGCAGTTTCAAGGCGCGTTGCAACAGTTTGCGGTTGcc                                                                <  2:2738259/289‑1 (MQ=255)
                                                                                                                                                                                                     gggTCGGCTCTTTCGCCTCCAT‑CGTCGTCGCGGCGGGTGTGCCTTCTACCGTGTGTACTATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTACCGATTTCCCCTGAATCATGCCGTCGCTGACCTGCGGCAGTTTCAAGGCGCGTTGCAACAGTTTGCGGTTGcc                                                                <  2:91052/288‑1 (MQ=255)
                                                                                                                                                                                                            ttCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCgt                                                                                                                                                                                                                    >  2:806313/1‑134 (MQ=255)
                                                                                                                                                                                                            ttCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGAt                                                                                                                                                 <  1:1304310/201‑1 (MQ=255)
                                                                                                                                                                                                            ttCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGAt                                                                                                                                                 >  2:1304310/1‑201 (MQ=255)
                                                                                                                                                                                                            ttCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTACCGATTTCCCCTGAATCATGCCGTCGCTTACCTGCGGCAGTGTCACGGCGCGTTGCACTAGTTTGCGGTTGCCCTCgtgt                                                         >  2:1155295/1‑289 (MQ=255)
                                                                                                                                                                                                                    cTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTACCGATTTCCCCTGAATCATGCCGTCGCTGACCTGCgg                                                                                                    >  1:2056410/1‑238 (MQ=255)
                                                                                                                                                                                                                      tCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTAccgat                                                                                                                                    <  1:1295401/204‑5 (MQ=255)
                                                                                                                                                                                                                      tCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTAc                                                                                                                                        >  1:2912472/1‑200 (MQ=255)
                                                                                                                                                                                                                      tCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTACCGATTTCCCCTGAATCATGCCGTCGCTGACCTGCGGCAGTTTCAAGGCGCGTTGCAACAGTTTGCGGTTTCCCTCGTGTGGACTGGtca                                               >  1:2023634/1‑289 (MQ=255)
                                                                                                                                                                                                                               cGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTACCGATTTCCCCTGAATCATGCCGTCGCTGACCTGCGGCAGTTTCAAGGCGCGTTGCAACAGTTTGCGGTTGCCCTCGTGTGGACTGGTCATCAGaaa                                        >  1:1320358/1‑288 (MQ=255)
                                                                                                                                                                                                                                  ctcGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGcc                                                                                                                                                                                                                                                                >  1:1415861/1‑69 (MQ=255)
                                                                                                                                                                                                                                    cGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGTGGATCAGACGTACCGATTTCCCCTGAATCATGCCGTCGCCGACCTGCGGCAGTTTCAAGGCCCGTTGCAACAGTTTGCGGTTGCCCCGTTTTGGACTGGTTCTCAGGAAGCTGCg                                  >  2:1661453/1‑289 (MQ=255)
                                                                                                                                                                                                                                            gtgCCTTCTACCGTATGTAATATTGCGCCCAGCTG‑CAATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCGTCTTCAAAACGCTGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGGCGTACCGATTTCCCCTGAATCATGCCGTCGCTGACCTGCGGCAGTTTCAAGGCGCGTTGCAACAGTTTGCGGTTGCCCTCGTGTGGGCTGGTCATCAGAAAGCTGCGTCCGGCCa                          <  1:3275900/289‑1 (MQ=255)
                                                                                                                                                                                                                                                   cTACCGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTACCGATTTCCCCTGAATCATGCCGTCGCTGACCTGCGGCAGTTTCAAGGCGCGTTGCAACAGTTTGCGGTTGCCCTCGTGTGGACTGGTCATCAGAAAGCTGCGTCCGGCCATGGTTtg                   >  2:3047937/1‑289 (MQ=255)
                                                                                                                                                                                                                                                       cGTATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTACCGATTTCCCCTGAATCATGCCGTCGCTGACCTGCGGCCGTTTCAAGGCGCGTTGCAACAGTTTGCGGTTGCCCTCGGGTGGACCGGTCATCAGAAAGCTGCGTCCGGCTCTGGTCtgtct                >  2:2418142/1‑286 (MQ=255)
                                                                                                                                                                                                                                                         tATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTACCGATTTCCCCTGAATCATGCCGTCGCTGACCTGCGGCAGTTTCAAGGCGCGTTGCAACAGTTTGCGGTTGCCCTCGTGTGGACTGGTCATCAGAAAGCTGCGTCCGGCCATGGTTTGTGTCAg             >  1:2990020/1‑289 (MQ=255)
                                                                                                                                                                                                                                                         tATGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTACCGATTTCCCCTGAATCATGCCGTCGCTGACCTGCGGCAGTTTCAAGGCGCGTTGCAACAGTTTGCGGTTGCCCTCGTGTGGACTGGTCATCAGAAAGCTGCGTCCGGCCATGGTTTGTGTCAg             >  1:910884/1‑289 (MQ=255)
                                                                                                                                                                                                                                                          aTGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGc                                                                                                                                                                                                   <  1:1659050/106‑1 (MQ=255)
                                                                                                                                                                                                                                                          aTGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTACCGATTTCCCCTGAATCATGCCGTCGCTGACCTGCGGCAGTTTCAAGGCGCGTTGCAACAGTTTGCGGTTGCCCTCGtgtg                                                        >  2:2880883/1‑245 (MQ=255)
                                                                                                                                                                                                                                                           tGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTACCGATTTccc                                                                                                                               >  2:620196/1‑173 (MQ=255)
                                                                                                                                                                                                                                                           tGTAATATTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTACCGATTTCCCCTGAATCATGc                                                                                                                    >  1:3320216/1‑184 (MQ=255)
                                                                                                                                                                                                                                                             tAATATTGCGCCCAGCTG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTACCGATTTCCCCTGAATCATGCCGTCGCTGACCTGCGGCAGTTTCAAGGCGCGTTGCAACAGTTTGCGGTTGCCCTCGTGTGGACTGGTCATCAGAAAGCTGCGTCCGGCCATGGTTTGTGTc               <  1:608851/283‑1 (MQ=255)
                                                                                                                                                                                                                                                                tatTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAat                                                                                                                                                                               >  2:1345573/1‑120 (MQ=255)
                                                                                                                                                                                                                                                                tatTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAat                                                                                                                                                                               <  1:1345573/120‑1 (MQ=255)
                                                                                                                                                                                                                                                                tatTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTa                                                                                                                                         <  2:1423372/158‑1 (MQ=255)
                                                                                                                                                                                                                                                                tatTGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTACCGATTTCCCCTGAATCATGCCGTCGCTGACCTGCGGCAGTTTCAAGGCGCGTTGCAACAGTTTGCGGTTGCCCTCGTGTGGACTGGTCATCAGAAAGCTGCGTCCGGCCATGGTTTGTGTCAGGGCtttt      >  1:689597/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                   tGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTa                                                                                                                                         <  1:1006866/155‑1 (MQ=255)
                                                                                                                                                                                                                                                                   tGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTACCGATTTCCCCTGAATCATGCCGTCGCTGACCTGCGGCAGTTTCAAGGCGCGTTGCAACAGTTTGCGGTTGcc                                                                <  1:255582/228‑1 (MQ=255)
                                                                                                                                                                                                                                                                   tGCGCCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTACCGATTTCCCCTGAATCATGCCGTCGCTGACCTGCGGCAGTTTCAAGGCGCGTTGCAACAGTTTGCGGTTGCCCTCGTGTGGACTGGTCATCAGAAAGCTGCGTCCGGCCATGGTTTGTGTCAGGGCTTTTGGt   >  1:1610145/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                    gcgcCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTACCGATTTCCCCTGAATCATGCCGTCGCTGACCTGCGGCAGTTTCAAGGCGCGTTGCAACAGTTTGCGGTTGCCCTCGTGTGGACTGGTCATCAGAAAGCTGCGTCCGGCCATGGTTTGTGTCAGGGCTTTTGGtt  <  1:1155295/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                    gcgcCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTACCGATTTCCCCTGAATCATGCCGTCGCTGACCTGCGGCAGTTTCAAGGCGCGTTGCAACAGTTTGCGGTTGCCCTCGTGTGGACTGGTCATCAGAAAGCTGCGTCCGGCCATGGTTTGTGTCAGGGCTTTTGGtt  <  2:1629678/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                     cgcCCAGCGGCGATTCCGAGGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTACCGATTTCCCCTGAATCATGCCGTCGCTGACCTGCGGCAGTTTCAAGGCGCGTTGCAACAGTTTGCGGTTGCCCTCGTGTGGACTGGTCATCAGAAAGCTGCGTCCGGCCATGGTTTGTGTCAGGGCTTTTGGtt  >  2:3220997/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                     cgcCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTACCGATTTCCCCTGAATCATGCCGTCGCTGACCTGCGGCAGTTTCAAGGCGCGTTGCAACAGTTTGCGGTTGCCCTCGTGTGGACTGGTCATCAGAAAGCTGCGTCCGGCCATGGTTTGTGTCAGGGCTTTTGGtt  <  2:754715/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                     cgcCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTACCGATTTCCCCTGAATCATGCCGTCGCTGACCTGCGGCAGTTTCAAGGCGCGTTGCAACAGTTTGCGGTTGCCCTCGTGTGGACTGGTCATCAGAAAGCTGCGTCCGGCCATGGTTTGTGTCAGGGCTTTTGGt   >  1:1920771/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                     cgcCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTACCGATTTCCCCTGAATCATGCCGTCGCTGACCTGCGGCAGTTTCAAGGCGCGTTGCAACAGTTTGCGGTTGCCCTCGTGTGGACTGGTCATCAGAAAGCTGCGTCCGGCCATGGTTTGTGTCAGGGCTTTTGGt   >  2:2250546/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                     cgcCCAGCGG‑CGATTCCGAGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTACCGATTTCCCCTGAATCATGCCGTCGCTGACCTGCGGCAGTTTCAAGGCGCGTTGCAACAGTTTGCGGTTGCCCTCGTGTGGACTGGTCATCAGAAAGCTGCGTCCGGCCATGGTTTGTGTCAGGGCTTTTGGt   >  1:3317469/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                                |||                                                                                                                                                                                                                                                                                   
CTGGCGCGCTTTACCGGAACTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTGCTTTTACCCGCGCCGTTTGGCCCCAGCAAACCAAAAATCTCCCCACGTTTAACGGCAAAGTTGACGTGATCGGTGGCGGCAAAATCCCCAAATTTCTTGGTCAGTTCTTTCGCTTCGAT‑CACCGTCTCGCCGGGTGTGCCTTCTACCGTATGTAATATTGCGCCCAGCGG‑GCTTTCGCTGGTTCCGGCACCGCCCAGCAAATCAATAAACGCATCTTCAAAACGCGGCGTAGTTTCGTTGATGTTGATTTCCGGCATCCCGTCGGCATGGCGAATATCGTCTGGTGTGGCCTCTTTTTTGAGGATCAGACGTACGCTTTTCCCCTGAATCATGCCGTCGCTGACCTGCGGCAGTTTCAAGGCGCGTTGCAACAGTTTGCGGTTGCCCTCGTGTGGACTGGTCATCAGAAAGCTGCGTCCGGCCATGGTTTGTGTCAGGGCTTTTGGTT  >  CP042583/690649‑691196

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A