Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F210 I1 R1 4928 385.2 6658600 97.5% 6492135 231.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 728,350 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583728,3500AT99.7% 761.0 / NA 319intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (149/168);  minor base C (0/1);  total (150/169)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583728,3510CG99.4% 753.9 / NA 319intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (148/169);  minor base T (2/0);  total (150/169)
Fisher's exact test for biased strand distribution p-value = 2.20e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583728,3520TA99.7% 755.3 / NA 319intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (149/169);  minor base C (1/0);  total (150/169)
Fisher's exact test for biased strand distribution p-value = 4.70e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 319 total aligned reads displayed.

CCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGACTACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCACTAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCCACACTAACACCGCCGGAACTGATCACCACATCCGCCTGGCTGTCGGCTTCAATAAATGCGGCGCGCAGGGCATGGGGATCGTCGCGGATAATCCCTAAGTTAATTACCTCGCATCCCAACTGTTCTAACATCAGGTG  >  CP042583/728073‑728631
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                       
ccACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGtt                                                                                                                                                                                                                                                                                >  1:2745093/1‑289 (MQ=255)
             gCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCg                                                                                                                                                                                                                                                                   <  1:2548364/289‑1 (MQ=255)
              ccGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCg                                                                                                                                                                                                                                                                   >  1:1519915/1‑288 (MQ=255)
                    tCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAAc                                                                                                                                                                                                                                                             <  1:1188536/288‑1 (MQ=255)
                            cAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTg                                                                                                                                                                                                                                                    <  1:204361/289‑1 (MQ=255)
                                 cGATAACGGAGTTGCCGAGGCTAAAGGGGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAg                                                                                                                                                                                                                                               <  2:1378868/289‑1 (MQ=255)
                                   aTAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTCCGTACGCGCTGGCGCGCGTGCAGGCCGCTGCCGGTGTTACCGCTTATTTTTGCCAGCAAAGGCTGTACCAGTGGATAGAAGTGCAGGGTCGCTGAAACCGGTTTGCCGGGCCGGCCGCCGAACCCGCCATGGCTGAGtt                                                                                                                                                                                                                                             >  2:3082746/1‑289 (MQ=255)
                                    tAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGttt                                                                                                                                                                                                                                            >  2:2779963/1‑289 (MQ=255)
                                    tAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCAGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACAAGTTGATAGTAGGTCAGCGTCGCTGAAACCGGGTTCCCCGGCAGGCCGCCGAACCAGCTGTTGCTGGGttt                                                                                                                                                                                                                                            >  2:218643/1‑289 (MQ=255)
                                            ttGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGc                                                                                                                                                                                                                                                   >  2:2614319/1‑274 (MQ=255)
                                            ttGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGc                                                                                                                                                                                                                                                   <  1:2614319/274‑1 (MQ=255)
                                             tGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACcgaacgc                                                                                                                                                                                                                                   >  2:3006567/1‑289 (MQ=255)
                                                cGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACcgaacgcga                                                                                                                                                                                                                                 <  2:766915/288‑1 (MQ=255)
                                                     cTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGt                                                                                                                                                                                                                            <  1:2381776/288‑1 (MQ=255)
                                                     cTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGt                                                                                                                                                                                                                            <  1:2084716/288‑1 (MQ=255)
                                                              cTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCgg                                                                                                                                                                                                                                                                          >  1:1888289/1‑233 (MQ=255)
                                                                 aaTATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGt                                                                                                                                                                                                                            <  1:1295745/276‑1 (MQ=255)
                                                                   tatatggtaaCCCTGATGTCGGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACcgaacgcg                                                                                                                                                                                                                                  <  1:346820/259‑1 (MQ=255)
                                                                      atgtgaaCCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCCGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTAc                                                                                                                                                                                                                                          >  2:2243861/7‑257 (MQ=255)
                                                                      atgtgaaCCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTAc                                                                                                                                                                                                                                          <  1:2243861/251‑1 (MQ=255)
                                                                           aaCCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCt                                                                                                                                                                                                      >  1:843537/2‑288 (MQ=255)
                                                                           aaCCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCt                                                                                                                                                                                                      >  1:2581234/2‑288 (MQ=255)
                                                                           aaCCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCt                                                                                                                                                                                                      >  1:2484762/2‑288 (MQ=255)
                                                                             cccTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCCGAGCTTACCGAACGCGACCGGTTTCCCTGGTTCAACCGCCaccctc                                                                                                                                                                                                    >  2:2089590/1‑283 (MQ=255)
                                                                                tGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTAAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGCTTACCTGGTTTAATCGCCTGCTTCCata                                                                                                                                                                                                >  2:2268645/1‑287 (MQ=255)
                                                                                 gATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGaa                                                                                                                                                                                               >  1:319350/1‑289 (MQ=255)
                                                                                  aTGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAg                                                                                                                                                                                              >  1:2306554/1‑289 (MQ=255)
                                                                                   tGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAG‑CGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAgg                                                                                                                                                                                             <  1:439424/288‑1 (MQ=255)
                                                                                   tGTACGGTGGTCGTCCCTTCCAGTTCGCCTGCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAgg                                                                                                                                                                                             <  2:1285081/289‑1 (MQ=255)
                                                                                        ggtggtCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACcgaacgcgaac                                                                                                                                                                                                                               >  1:1265967/1‑250 (MQ=255)
                                                                                        ggtggtCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGa                                                                                                                                                                                          >  1:2392817/1‑287 (MQ=255)
                                                                                        ggtggtCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGAtc                                                                                                                                                                                        <  1:604079/289‑1 (MQ=255)
                                                                                            gtcgtcACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTcc                                                                                                                                                                                     >  2:1695016/1‑288 (MQ=255)
                                                                                               gtcACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCCGGCGGGACGCTGTGCGTACTCGCTGTCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAACGGCCGTACCAGTTGATAGAAGGTCAGCGTCGCTTAAACCGGGTTGCCCGGCAGGCCGCAGGACCAGCTATTGCTGAGTTTACCGCACCCGAACGGTTTACCTGGTTTACTCCCAACCTTCCAGTAgcgtatatcaccc                                                                                                                                                                                  >  2:2013448/1‑276 (MQ=255)
                                                                                               gtcACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAg                                                                                                                                                                                                        >  2:1524563/1‑266 (MQ=255)
                                                                                                 cACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGc                                                                                                                                                                                                                                                   >  1:2847437/1‑221 (MQ=255)
                                                                                                      ccAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTc                                                                                                                                                                          >  1:2781363/1‑289 (MQ=255)
                                                                                                           tCGCCATCGGCGTGGCGTTGCAGGCCGCCGCGCTGGAGATCAAGACGGCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTCCGCGATGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGaa                                                                                                                                                                     <  2:2792693/289‑1 (MQ=255)
                                                                                                            cGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACgg                                                                                                                                                                                                                             <  2:1934740/232‑1 (MQ=255)
                                                                                                            cGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACgg                                                                                                                                                                                                                             >  1:1934740/1‑232 (MQ=255)
                                                                                                              ccATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGc                                                                                                                                                                                                                                                         <  1:3032695/202‑1 (MQ=255)
                                                                                                                aTCGGCGTTGCGTTGCAGCACCCCTCGCTGGAAATCAAGACGGCCTGGCGTTGTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATATCCCCCAGCTCTTCAAGAATCGtt                                                                                                                                                                <  2:2581234/289‑1 (MQ=255)
                                                                                                                       ttgcgttgcAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGgtg                                                                                                                                                          <  1:1153738/288‑1 (MQ=255)
                                                                                                                         gcgttgcAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCTGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTa                                                                                                                                                        >  2:351802/1‑288 (MQ=255)
                                                                                                                           gttgcAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAAt                                                                                                                                                      <  1:2170785/288‑1 (MQ=255)
                                                                                                                             tgcAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTa                                                                                                                                                                                                                                                       <  2:886533/189‑1 (MQ=255)
                                                                                                                              gcagcaCGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGc                                                                                                                                                  <  1:822717/289‑1 (MQ=255)
                                                                                                                                agcaCGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGGGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGGTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGcc                                                                                                                                                 <  2:2048165/288‑1 (MQ=255)
                                                                                                                                   aCGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCa                                                                                                                                              <  1:911514/288‑1 (MQ=255)
                                                                                                                                    cgccgcGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTTTAATCCGGCCCAc                                                                                                                                             >  2:589416/1‑288 (MQ=255)
                                                                                                                                     gcggggcTGGAAATCGAGACGTCCTGGCAGTTTTTTCAGGCGGGACGCTGTGCGTACGGGCGGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTGTTGCCAGCAAAGGCTGTACCAGTTGAGAGAAGGTCAGCGTCGCTGAAACCGGGTTGGCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCAcc                                                                                                                                            <  2:2552268/283‑1 (MQ=255)
                                                                                                                                       cgcgCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCg                                                                                                                                                                                                                                                                   >  2:710403/1‑167 (MQ=255)
                                                                                                                                       cgcgCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACAGCTTAGTTCTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCAATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAACTTCCAGAAGGCGAGCCCCACCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCcac                                                                                                                                         >  1:3059760/1‑289 (MQ=255)
                                                                                                                                       cgcgCCGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGa                                                                                                                                                                                                >  1:1566457/1‑234 (MQ=255)
                                                                                                                                             ggAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCcactgaaac                                                                                                                                   <  1:3089317/289‑7 (MQ=255)
                                                                                                                                              ggaaTCAAGGCGCCCTGGGGTTTTTTTCAGGCGGGACGCTGGGCGTACGCGCGGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCcactgaaac                                                                                                                                   <  2:122145/286‑7 (MQ=255)
                                                                                                                                               aaaTCAAGCCGTCGGGGGGTTTTTTTAAGGCGGGACGCTGTGCGGGCGCGCGGGCGCGGTGGCAGTCCGCGGGCGGTGTTACCGCTTCGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCcactgaaaca                                                                                                                                  <  2:2225598/288‑8 (MQ=255)
                                                                                                                                                     aGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCCACTGAAACACCGCCgg                                                                                                                           <  2:320206/289‑1 (MQ=255)
                                                                                                                                                           ccTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCCCTTCAAGAATCGGTTTGGTGTAATCCGCCTCACCCACTGAAAACCCGCCGGAACTGa                                                                                                                     >  2:294670/1‑289 (MQ=255)
                                                                                                                                                            cTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGAGCTcccc                                                                                                                                                                                   >  1:1987660/1‑226 (MQ=255)
                                                                                                                                                                cGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCCACTGAAACACCGCCGGAACTGATcac                                                                                                                 <  2:843537/288‑1 (MQ=255)
                                                                                                                                                                                     tgtgCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCCACTGAAACACCGCCGGAACTGATCACCACATCCGCCTGGCTGTCGGc                                                                                            <  1:2268645/288‑1 (MQ=255)
                                                                                                                                                                                       tgCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCCACTGAAACAccgccg                                                                                                                            <  1:385938/254‑1 (MQ=255)
                                                                                                                                                                                             cgcgCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCa                                                                                                                                              <  2:1742623/230‑1 (MQ=255)
                                                                                                                                                                                             cgcgCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCa                                                                                                                                              >  1:1742623/1‑230 (MQ=255)
                                                                                                                                                                                                 cTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTg                                                                                                                                                                                                                                                    <  2:815988/124‑1 (MQ=255)
                                                                                                                                                                                                 cTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAAt                                                                                                                                                                    >  1:2590889/1‑204 (MQ=255)
                                                                                                                                                                                                 cTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGcc                                                                                                                                                 >  1:1442473/1‑223 (MQ=255)
                                                                                                                                                                                                 cTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCcactgaaa                                                                                                                                    <  2:196881/236‑6 (MQ=255)
                                                                                                                                                                                                 cTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCCACTGAAACACCGCCGGAACTGATCACCACATCCGCCTGGCTGTCGGCTTCAATAAATgcg                                                                               >  2:3044072/1‑289 (MQ=255)
                                                                                                                                                                                                                        aggTGTTAGCGCTTAGTTTGGCCGTCGAAGGCAGTACCGGTTGACAGAATGTCGGGGTGGCCGAAACCGGGGTGGCCGGCAGGCCGCAGAACCAGCTGTTGCGGAGTTTACCGAACGCGAACGGGTTACCTGGTTGAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCCACTGAAACACCGCCGGAACTGATCACCACATCCGCCTGGCTGTCGGCTTCAATAAATGCGGCGCGCAGGGCATGGGGAtcgt                                                         <  2:2294804/287‑1 (MQ=255)
                                                                                                                                                                                                                             ttACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCCACTGAAACACCGCCGGAACTGATCACCACATCCGCCTGGCTGTCGGCTTCAATAAATGCGGCGCGCAGGGCATGGGGATCGTCGCGGa                                                   >  1:799700/1‑289 (MQ=255)
                                                                                                                                                                                                                              tACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAGTCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCCACTGAAACACCGCCGGAACTGATCACCACATCCGCCTGGCTGTCGGCTTCAATAAATGCGGCGCGCAGGGCATGGGGATCGTCGCGGa                                                   <  1:1116275/288‑1 (MQ=255)
                                                                                                                                                                                                                                     tAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCCACTGAAACACCGCCGGAACTGATCACCACATCCGCCTGGCTGTCGGCTTCAATAAATGCGGCGCGCAGGGCATGGGGATCGTCGCGGATAATcc                                             >  2:144476/1‑287 (MQ=255)
                                                                                                                                                                                                                                     tAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCCACTGAAACACCGCCGGAACTGATCACCACATCCGCCTGGCTGTCGGCTTCAATAAATGCGGCGCGCAGGGCATGGGGATCGTCGCGGATAATCCCt                                           <  1:580130/289‑1 (MQ=255)
                                                                                                                                                                                                                                            gCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGttt                                                                                                                                                               <  2:3099719/166‑1 (MQ=255)
                                                                                                                                                                                                                                                          tACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCCACTGAAACAccgccg                                                                                                                            >  2:539927/1‑187 (MQ=255)
                                                                                                                                                                                                                                                          tACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCCACTGAAACAccgccg                                                                                                                            <  1:539927/187‑1 (MQ=255)
                                                                                                                                                                                                                                                          tACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCCACTGAAACACCGCCGGAACTGATCACCACATCCGCCTGGCTGTCGGCTTCAATAAATGCGGCGCGCAGGGCATGGGGATCGTCGCGGATAATCCCTAAGTTAATTACCt                              <  1:2224779/281‑1 (MQ=255)
                                                                                                                                                                                                                                                          tACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCCACTGAAACACCGCCGGAACTGATCACCACATCCGCCTGGCTGTCGGCTTCAATAAATGCGGCGCGCAGGGCATGGGGATCGTCGCGGATAATCCCTAAGTTAATTACCTCGCATccc                      >  1:3150609/1‑289 (MQ=255)
                                                                                                                                                                                                                                                            ccAGTTGATAGAAGGTCATCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCCACTGAAACACCGCCGGAACTGATCACCACATCCGCCTGGCTGTCGGCTTCAATAAATGCGGCGCGCAGGGCATGGGGATCGTCGCGGATAATCCCTAAGTTAATTACCTCGCATCCCaa                    <  1:2122553/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                ttGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAg                                                                                                                                                                                <  2:421309/129‑1 (MQ=255)
                                                                                                                                                                                                                                                                ttGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCCACTGAAACACCGCCGGAACTGATCACCACATCCGCCTGGCTGTCGGCTTCAATAAATGCGGCGCGCAGGGCATGGGGATCGTCGCGGATAATCCCTAAGTTAATTACCt                              <  1:3294146/275‑1 (MQ=255)
                                                                                                                                                                                                                                                                ttGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCCACTGAAACACCGCCGGAACTGATCACCACATCCGCCTGGCTGTCGGCTTCAATAAATGCGGCGCGCAGGGCATGGGGATCGTCGCGGATAATCCCTAAGTTAATTACCTCGCATCCCaa                    >  2:2446038/1‑285 (MQ=255)
                                                                                                                                                                                                                                                                 tGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCCACTGAAACACCGCCGGAACTGATCACCACATCCGCCTGGCTGTCGGCTTCAATAAATGCGGCGCGCAGGGCATGGGGATCGTCGCGGATAATCCCTAAGTTAATTACCTCGCATCCCAACTGtt               <  1:294670/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                    tAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCt                                                                                                                                                >  1:135650/1‑157 (MQ=255)
                                                                                                                                                                                                                                                                     aGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCCACTGAAACACCGCCGGAACTGATCACCACATCCGCCTGGCTGTCGGCTTCAATAAATgcg                                                                               <  1:2913203/221‑1 (MQ=255)
                                                                                                                                                                                                                                                                     aGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCCACTGAAACACCGCCGGAACTGATCACCACATCCGCCTGGCTGTCGGCTTCAATAAATgcg                                                                               >  2:2913203/1‑221 (MQ=255)
                                                                                                                                                                                                                                                                        aGGTCAGCGTCGCTGAAACCGGGTTGGCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCCGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCCACTGAAACACCGCCGGAACTGATCACCACATCCGCCTGGCTGTCGGCTTCAATAAATGCGGCGCGCAGGGCATGGGGATCGTCGCGGATAATCCCTAAGTTAATTACCTCGCATCCCAACTGTTCTAAc          <  2:2385595/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                        aGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCCACTGAAACACCGCCGGAACTGATCACCACATCCGCCTGGCTGTCGGCTTCAATAAATGCGGCGCGCAGGGCATGGGGATCGTCGCGGATAATCCCTAAGTTAATTACCTCGCATCCCAACTGTTCTAAc          <  1:1961473/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                          gTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGc                                                                                                                                                                                            <  2:1860534/107‑1 (MQ=255)
                                                                                                                                                                                                                                                                          gTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCCACTGAAACACCGCCGGAACTGATCACCACATCCGCCTGGCTGTCGGc                                                                                            <  1:714693/203‑1 (MQ=255)
                                                                                                                                                                                                                                                                          gTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCCACTGAAACACCGCCGGAACTGATCACCACATCCGCCTGGCTGTCGGCTTCAATAAATGCGGCGCGCAGGGCATGGGGATCGTCGCGGATAATCCCTAAGTTAATTACCTCGCATCCCaa                    >  2:43350/1‑275 (MQ=255)
                                                                                                                                                                                                                                                                          gTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCCACTGAAACACCGCCGGAACTGATCACCACATCCGCCTGGCTGTCGGCTTCAATAAATGCGGCGCGCAGGGCATGGGGATCGTCGCGGATAATCCCTAAGTTAATTACCTCGCATCCCa                     >  1:1050401/1‑274 (MQ=255)
                                                                                                                                                                                                                                                                          gTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCCACTGAAACACCGCCGGAACTGATCACCACATCCGCCTGGCTGTCGGCTTCAATAAATGCGGCGCGCAGGGCATGGGGATCGTCGCGGATAATCCCTAAGTTAATTACCTCGCATCCCa                     <  2:1050401/274‑1 (MQ=255)
                                                                                                                                                                                                                                                                          gTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCCACTGAAACACCGCCGGAACTGATCACCACATCCGCCTGGCTGTCGGCTTCAATAAATGCGGCGCGCAGGGCATGGGGATCGTCGCGGATAATCCCTAAGTTAATTACCTCGCATCCCAACTGTTCTa            >  1:1084542/1‑283 (MQ=255)
                                                                                                                                                                                                                                                                          gTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCCACTGAAACACCGCCGGAACTGATCACCACATCCGCCTGGCTGTCGGCTTCAATAAATGCGGCGCGCAGGGCATGGGGATCGTCGCGGATAATCCCTAAGTTAATTACCTCGCATCCCAACTGTTCTa            <  2:1084542/283‑1 (MQ=255)
                                                                                                                                                                                                                                                                          gTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCCACTGAAACACCGCCGGAACTGATCACCACATCCGCCTGGCTGTCGGCTTCAATAAATGCGGCGCGCAGGGCATGGGGATCGTCGCGGATAATCCCTAAGTTAATTACCTCGCATCCCAACTGTTCTAACATCa      >  1:1005996/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                             aGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCCACTGAAACACCGCCGGAACTGATCACCACATCCGCCTGGCTGTCGGCTTCAATAAAGGCCGCGCGCCGGGCATGGGGAGCGTCGCGGATAAGCCCTAAGTTAATAACCCCGTCTCCCATCTGTTCTAACATCAGgt   >  2:3156427/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                              gCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCCACTGAAACACCGCCGGAACTGATCACCACATCCGCCTGGCTGTCGGCTTCAATAAATGCGGCGCGCAGGGCATGGGGATCGTCGCGGATAATCCCTAAGTTAATTACCTCGCATCCCAACTGTTCTAACATCAGgtg  >  2:3282502/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                       
CCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGACTACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACGCTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCACTAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTTTAATCGCCAGCTTCCAGAAGGCGATCTCCCCCAGCTCTTCAAGAATCGTTTTGGTGTAATCCGCCTCACCCACACTAACACCGCCGGAACTGATCACCACATCCGCCTGGCTGTCGGCTTCAATAAATGCGGCGCGCAGGGCATGGGGATCGTCGCGGATAATCCCTAAGTTAATTACCTCGCATCCCAACTGTTCTAACATCAGGTG  >  CP042583/728073‑728631

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A