Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F210 I1 R1 4928 385.2 6658600 97.5% 6492135 231.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,951,707 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,951,7070GC99.8% 941.2 / NA 396intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base C (202/192);  total (203/193)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,951,7080CG99.2% 935.7 / NA 396intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (202/191);  minor base A (1/2);  total (203/193)
Fisher's exact test for biased strand distribution p-value = 6.15e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,951,7090TA99.8% 951.9 / NA 396intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (203/192);  minor base C (0/1);  total (203/193)
Fisher's exact test for biased strand distribution p-value = 4.87e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 396 total aligned reads displayed.

TGTCCGGCCAGTGTTGTTCTCGCGTGGTGGTTAAATGTAACCCAGGCAAGGGCTTGATACTCACCAGTGTGGCGATAAATTCTTTTGCCTGAATCGCATCGTGCTGAAGGGAGCTTTCGCTGAATAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGGCTCGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAAGCTCGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGGCTCAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGACTTTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATACGGGGTACTACAAAAAAAATGCA  >  CP042583/1951427‑1951988
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                       
                ttCTCGCGTGGTGGTTAAATGTAACCCAGGCAAGGGCTTGATACTCACCAGTGTGGCGATAAATTCTTTTGCCTGAATCGCATCGTGCTGAAGGGAGCTTTCGCTGAATAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCCAAGCAAACGTTTGGCCTGGTCCAAGGACGGAAAACTGGTAATctgacc                                                                                                                                                                                                                                                                    >  2:1944641/1‑283 (MQ=255)
                   tcGCGTGGTGGTTAAATGTAACCCAGGCAAGGGCTTGATACTCACCAGTGTGGCGATAAATTCTTTTGCCTGAATCGCATCGTGCTGAAGGGAGCTTTCGCTGAATAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAgg                                                                                                                                                                                                                                                                <  1:2073741/289‑1 (MQ=255)
                     gcgTGGTGGTTAAATGTAACCCAGGCAAGGGCTTGATACTCACCAGTGTGGCGATAAATTCTTTTGCCTGAATCGCATCGTGCTGAAGGGAGCTTTCGCTGAATAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGcc                                                                                                                                                                                                                                                                    <  2:794648/283‑1 (MQ=255)
                     gcgTGGTGGTTAAATGTAACCCAGGCAAGGGCTTGATACTCACCAGTGTGGCGATAAATTCTTTTGCCTGAATCGCATCGTGCTGAAGGGAGCTTTCGCTGAATAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCATGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTACAACGGGTAATCGCGCCCAGgac                                                                                                                                                                                                                                                              >  1:3245223/1‑289 (MQ=255)
                          gtggtTAAATGTAACCCAGGCAAGGGCTTGATACTCACCAGTGTGGCGATAAATTCTTTTGCCTGAATCGCATCGTGCTGAAGGGAGCTTTCGCTGAATAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACa                                                                                                                                                                                                                                                          >  1:1429342/1‑288 (MQ=255)
                            ggtTAAATGTAACCCAGGCAAGGGCTTGATACTCACCAGTGTGGCGATAAATTCTTTTGCCTGAATCGCATCGTGCTGAAGGGAGCTTTCGCTGAATAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGct                                                                                                                                                                                                                                                       <  2:402397/289‑1 (MQ=255)
                                   tGTAACCCAGGCAAGGGCTTGATACTCACCAGTGTGGCGATAAATTCTTTTGCCTGAATCGCATCGTGCTGAAGGGAGCTTTCGCTGAATAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTtcat                                                                                                                                                                                                                                                <  1:1726573/289‑1 (MQ=255)
                                       aCCCAGGCAAGGGCTTGATACTCACCAGTGTGGCGATAAATTCTTTTGCCTGAATCGCATCGTGCTGAAGGGAGCTTTCGCTGAATAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAAt                                                                                                                                                                                                                                                                          >  1:2934338/1‑259 (MQ=255)
                                          cAGGCAAGGGCTTGATACTCACCAGTGTGGCGATAAATTCTTTTGCCTGAATCGCATCGTGCTGAAGGGAGCTTTCGCTGAATAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCAtt                                                                                                                                                                                                                                         <  2:1310483/289‑1 (MQ=255)
                                             gCAAGGGCTTGATACTCACCAGTGTGGCGATAAATTCTTTTGCCTGAATCGCATCGTGCTGAAGGGAGCTTTCGCTGAATAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAACACGTTGTGCCTGGTCCAACGACGTAAAAAGGGGAATTGTCGCCAGGAGCACAGCCTCCTCCTCCCCATTACg                                                                                                                                                                                                                                      >  2:2460763/1‑289 (MQ=255)
                                                   gCTTGATACTCACCAGTGTGGCGATAAATTCTTTTGCCTGAATCGCATCGTGCTGAAGGGAGCTTTCGCTGAATAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACgttgtt                                                                                                                                                                                                                                 <  2:544946/288‑1 (MQ=255)
                                                       gATACTCACCAGTGTGGCGATAAATTCTTTTGCCTGAATCGCATCGTGCTGAAGGGAGCTTTCGCTGAATAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGCCGACAGCTTCTTCATCACCATTACGTTGTTGCCAg                                                                                                                                                                                                                            >  1:1168355/1‑289 (MQ=255)
                                                                 ggtgtGGCGATAAATTCTTTTGCCTGAATCGCATCGTGCTGAAGGGAGCTTTCGCTGAATAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCg                                                                                                                                                                                                                  <  2:1635736/288‑1 (MQ=255)
                                                                 aGTGTGGCGATAAATTCTTTTGCCTGAATCGCATCGTGCTGAAGGGAGCTTTCGCTGAATAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTtcat                                                                                                                                                                                                                                                <  2:1459587/259‑1 (MQ=255)
                                                                   tgtgGCGATAAATTCTTTTGCCTGAATCGCATCGTGCTGAAGGGAGCTTTCGCTGAATAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCggg                                                                                                                                                                                                                >  1:1324235/1‑289 (MQ=255)
                                                                           tAAATTCTTTTGCCTGAATCGCATCGTGCTGAAGGGAGCTTTCGCTGAATAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGttt                                                                                                                                                                                                         <  1:2308894/288‑1 (MQ=255)
                                                                             aaTTCTTTTGCCTGAATCGCATCGTGCTGAAGGGAGCTTTCGCTGAATAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAgg                                                                                                                                                                                                                                                                <  1:322002/231‑1 (MQ=255)
                                                                                        cTGAATCGCATCGTGCTGAAGGGAGCTTTCGCTGAATAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGgccagc                                                                                                                                                                                           <  2:1010948/289‑1 (MQ=255)
                                                                                                cATCGTGCTGAAGGGAGCTTTCGCTGAATAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTtcatca                                                                                                                                                                                                                                              <  1:3153403/230‑1 (MQ=255)
                                                                                                  tCGTGCTGAAGGGAGCTTTCGCTGAATAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAgg                                                                                                                                                                                 <  1:2204685/289‑1 (MQ=255)
                                                                                                     tGCTGAAGGGAGCTTTCGCTGAATAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTtcat                                                                                                                                                                                                                                                <  2:868861/223‑1 (MQ=255)
                                                                                                               aGCTTTCGCTGAATAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGc                                                                                                                                                                                                                                                        <  1:1683324/205‑1 (MQ=255)
                                                                                                               aGCTTTCGCTGAATAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCg                                                                                                                                                                                                                  >  2:1238163/1‑243 (MQ=255)
                                                                                                               aGCTTTCGCTGAATAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCg                                                                                                                                                                                                                  <  1:1238163/243‑1 (MQ=255)
                                                                                                               aGCTTTCGCTGAATAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTTAATTGCCAGCCAGCCCAAGGCATCAAAAGCggt                                                                                                                                                                    >  2:227994/1‑287 (MQ=255)
                                                                                                               aGCTTTCGCTGAATAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCg                                                                                                                                                                      >  2:3257547/1‑287 (MQ=255)
                                                                                                               aGCTTTCGCTGAATAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCg                                                                                                                                                                      >  1:1547009/1‑287 (MQ=255)
                                                                                                               aGCTTTCGCTGAATAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCg                                                                                                                                                                      >  1:1197390/1‑287 (MQ=255)
                                                                                                               aGCTTTCGCTGAATAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCg                                                                                                                                                                      >  1:281460/1‑287 (MQ=255)
                                                                                                                    tctcTGAATAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTga                                                                                                                                                               <  1:777722/286‑1 (MQ=255)
                                                                                                                    tCGCTGAATAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTga                                                                                                                                                               <  1:1641739/289‑1 (MQ=255)
                                                                                                                            tAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGaaa                                                                                                                                                       <  1:572949/289‑1 (MQ=255)
                                                                                                                               cGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCCGTAGAATTCCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGCCTTTGAGAGGGAAAGGa                                                                                                                                                    >  2:18402/1‑289 (MQ=255)
                                                                                                                               cGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAggg                                                                                                                                                          <  2:1644872/283‑1 (MQ=255)
                                                                                                                                    gCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTaaa                                                                                                                                                                                                                                                                                   <  2:1975759/157‑1 (MQ=255)
                                                                                                                                         aGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGc                                                                                                                                                                                                                                                        <  2:3225903/179‑1 (MQ=255)
                                                                                                                                         aGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAgg                                                                                                                                                           >  1:2672969/1‑272 (MQ=255)
                                                                                                                                                   tACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTg                                                                                                                                                                <  2:2946969/257‑1 (MQ=255)
                                                                                                                                                     ccGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGaa                                                                                                                                                        <  1:2963396/263‑1 (MQ=255)
                                                                                                                                                         cacaGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATcgcg                                                                                                                                                                                                                                                                      <  2:647659/149‑1 (MQ=255)
                                                                                                                                                         cacaGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATcgcg                                                                                                                                                                                                                                                                      >  1:647659/1‑149 (MQ=255)
                                                                                                                                                          acaGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCaaaa                                                                                                                                                                         >  1:1928913/1‑241 (MQ=255)
                                                                                                                                                          acaGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTc                                                                                                                         >  1:337542/1‑289 (MQ=255)
                                                                                                                                                              cGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCg                                                                                                                     >  2:2157405/1‑289 (MQ=255)
                                                                                                                                                                  gCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGaa                                                                                                                  >  1:1879384/1‑288 (MQ=255)
                                                                                                                                                                           ggCGGGGTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGaa                                                                                                                                                        <  2:2849679/241‑1 (MQ=255)
                                                                                                                                                                                ggTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTgcgacaaat                                                                                                   >  2:3078800/1‑281 (MQ=255)
                                                                                                                                                                                 gTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAg                                                                                                                                                                                                                            >  1:1770283/1‑167 (MQ=255)
                                                                                                                                                                                 gTAAAAGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATg                                                                                                  >  2:1716006/1‑289 (MQ=255)
                                                                                                                                                                                   aaaaGTAAATTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATgg                                                                                                 <  1:717572/288‑1 (MQ=255)
                                                                                                                                                                                          aaTTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTc                                                                                                                                                                                     <  1:1816305/197‑1 (MQ=255)
                                                                                                                                                                                          aaTTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCa                                                                                             <  2:35811/285‑1 (MQ=255)
                                                                                                                                                                                          aaTTGCCCTGCGACGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAg                                                                                         >  1:1014585/1‑289 (MQ=255)
                                                                                                                                                                                               ccctgcgacGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTg                                                                                                                                                                                                     >  2:1791271/9‑176 (MQ=255)
                                                                                                                                                                                                  tgcgacGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTga                                                                                                                                                               <  2:604498/206‑1 (MQ=255)
                                                                                                                                                                                                    cgacGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTCTGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGACTGCAGGGTTCAGCCGGAATCCCTTGCGACCAATGGCCCCAGAGCTTTTCCAga                                                                               >  2:3167793/4‑288 (MQ=255)
                                                                                                                                                                                                    cgacGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAgc                                                                               >  1:376948/4‑289 (MQ=255)
                                                                                                                                                                                                        gggTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCg                                                                           <  1:3298907/289‑1 (MQ=255)
                                                                                                                                                                                                         ggTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGaa                                                                                                                                                   <  2:1567524/216‑1 (MQ=255)
                                                                                                                                                                                                          gTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTc                                                                                                                                                                                     <  1:1471800/181‑1 (MQ=255)
                                                                                                                                                                                                          gTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCACGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACCAATGGCCCAGTAGATTTTCCacgccctta                                                                         >  2:2783947/1‑281 (MQ=255)
                                                                                                                                                                                                          gTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCgta                                                                         >  2:735837/1‑289 (MQ=255)
                                                                                                                                                                                                          gTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCg                                                                           >  1:47840/1‑287 (MQ=255)
                                                                                                                                                                                                            cAAAAGCATTCAGCCCCCAAAGGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCgtagt                                                                       <  2:1197390/289‑1 (MQ=255)
                                                                                                                                                                                                                aGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAgt                                                                   <  1:2460763/289‑2 (MQ=255)
                                                                                                                                                                                                                    ttCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGATGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCCGTAGCTTTTCCAGCGGCGTAGTAAgtgagt                                                               >  2:1685482/1‑284 (MQ=255)
                                                                                                                                                                                                                    ttCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAgtgatt                                                               >  1:232649/1‑284 (MQ=255)
                                                                                                                                                                                                                    ttCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAgtgatt                                                               >  1:297525/1‑284 (MQ=255)
                                                                                                                                                                                                                    ttCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCCTTGAGAGGGAAAGGAATCTCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCCCAGTAGATTTTCCCGCGCCGTAGTAAggtatt                                                               >  2:2103042/1‑284 (MQ=255)
                                                                                                                                                                                                                    ttCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCT‑GCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTgcgacaaa                                                                                                    >  1:843206/1‑244 (MQ=255)
                                                                                                                                                                                                                         cccccAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAgcgc                                                                             <  1:1961764/270‑1 (MQ=255)
                                                                                                                                                                                                                          ccccAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCAcgc                                                         <  2:297525/289‑1 (MQ=255)
                                                                                                                                                                                                                          ccccAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCAcg                                                          <  1:2150478/288‑1 (MQ=255)
                                                                                                                                                                                                                                agggttAAGTCGGCGTGTTCCGGGTGCTGGAGAAGAAAACGTTGGGCCTGGTCCAATGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTATAATTGCGGGTCTGTTTGCTGACTGGCCAACCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCTCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACct                                                   <  2:2205749/284‑1 (MQ=255)
                                                                                                                                                                                                                                   cGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACgtt                                                                                                                                                                                                                                    <  2:2535209/109‑1 (MQ=255)
                                                                                                                                                                                                                                   cGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACctct                                                 >  1:1990856/1‑288 (MQ=255)
                                                                                                                                                                                                                                   cGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACctct                                                 >  1:1004027/1‑288 (MQ=255)
                                                                                                                                                                                                                                    gTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTcc                                               <  1:1044920/289‑1 (MQ=255)
                                                                                                                                                                                                                                      acgTCGGCGTGTTCGCAGTGCTGGAGAAGACAACGTTGTGCCTGTTCCAACGACGTAAAACGGGTAATCGCGGCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGTTAACCCTAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTccc                                              <  2:1953568/286‑1 (MQ=255)
                                                                                                                                                                                                                                            gCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTaa                                        <  2:3321814/288‑1 (MQ=255)
                                                                                                                                                                                                                                             cGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTCGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTTAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACACATGGCGCTGTAGATTTTCCCGCGCCGTAGTCAGTTATTGCACGCGGACCTGTCCCTGTTaaaa                                      >  2:1429121/1‑289 (MQ=255)
                                                                                                                                                                                                                                             cGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGTGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTaaaa                                      >  2:1362511/1‑289 (MQ=255)
                                                                                                                                                                                                                                             cGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTaaaa                                      >  1:2649538/1‑289 (MQ=255)
                                                                                                                                                                                                                                                gtTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGcc                                   <  2:1164705/289‑1 (MQ=255)
                                                                                                                                                                                                                                                gtTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGcc                                   <  1:2562987/289‑1 (MQ=255)
                                                                                                                                                                                                                                                gtTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGcc                                   <  1:1562019/289‑1 (MQ=255)
                                                                                                                                                                                                                                                gtTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGc                                    <  2:232649/288‑1 (MQ=255)
                                                                                                                                                                                                                                                 ttCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGcc                                   <  2:189265/288‑1 (MQ=255)
                                                                                                                                                                                                                                                   ccGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGTGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTca                                <  1:1362511/289‑1 (MQ=255)
                                                                                                                                                                                                                                                     gggTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTcaca                              <  1:2885405/289‑1 (MQ=255)
                                                                                                                                                                                                                                                        tGCTGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACAtt                            <  1:1950653/288‑1 (MQ=255)
                                                                                                                                                                                                                                                           tGGCGAAGGAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTcaca                              <  2:2912586/283‑1 (MQ=255)
                                                                                                                                                                                                                                                           tGGCGAAGAGAACGTTGGGCCTGGTCCACCAACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATGACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATtata                         <  2:1547009/288‑1 (MQ=255)
                                                                                                                                                                                                                                                           tGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCaaaa                                                                                                                                                                         >  2:925945/1‑144 (MQ=255)
                                                                                                                                                                                                                                                           tGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCaaaa                                                                                                                                                                         <  1:925945/144‑1 (MQ=255)
                                                                                                                                                                                                                                                           tGGCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGGAAGGTATTGCACGCGGACCTCCCCCTGTTAAAAGCCTCACATAATAc                        >  2:2433531/1‑289 (MQ=255)
                                                                                                                                                                                                                                                             gCGAAGAAAACGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGa                                                                                        <  2:2727428/223‑1 (MQ=255)
                                                                                                                                                                                                                                                                       cGTTGTGCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTccc                                              <  2:2667425/255‑1 (MQ=255)
                                                                                                                                                                                                                                                                          tgtgCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATACGGGGTACTACaaaaa         <  2:1036295/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                             gCCTGGTCCAACGACGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGgcca                                                                                                                                                                                             <  1:2749169/106‑1 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                       
TGTCCGGCCAGTGTTGTTCTCGCGTGGTGGTTAAATGTAACCCAGGCAAGGGCTTGATACTCACCAGTGTGGCGATAAATTCTTTTGCCTGAATCGCATCGTGCTGAAGGGAGCTTTCGCTGAATAGCGTCAGCCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAATTGCCCTGGCTCGGGTCAAAAGCATTCAGCCCCCAAATGCGTAAGTCGGCGTGTTCCGGGTGCTGGCGAAGAAAACGTTGTGCCTGGTCCAAGCTCGTAAAACGGGTAATCGCGCCCAGGACGACAGCTTCTTCATCACCATTACGTTGTTGCCAGTAGAATTGCGGGTATGTTTGCTGACTGGCCAGCCAGCTCAAGGCATCAAAAGCGTCTTTGAGAGGGAAAGGAATATCGATAACCCGAATGCCGGGTGTCGCCGGAATCTCTTGGCTCAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGACTTTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATACGGGGTACTACAAAAAAAATGCA  >  CP042583/1951427‑1951988

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A