Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 529,265 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583529,2650AT99.5% 502.2 / NA 213intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (92/120);  minor base G (1/0);  total (93/120)
Fisher's exact test for biased strand distribution p-value = 4.37e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583529,2660CG99.1% 495.4 / NA 213intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  major base G (91/119);  minor base T (2/0);  total (93/120)
Fisher's exact test for biased strand distribution p-value = 1.91e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP042583529,2670TA99.1% 502.8 / NA 213intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (93/118);  minor base C (0/2);  total (93/120)
Fisher's exact test for biased strand distribution p-value = 5.06e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 213 total aligned reads displayed.

GTCGTTTTGAAGGCGAAGTCAATCAGGCTCATTTCGGAAGCTTGCGCCGCCAGCACCACATCCCCACTAGTCGGTGCGAGAATAATCGCCGCCGGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTACTCGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTACTAGCCTGGCTGGACGGTAACACTTTGTGCCCCATAATGGCACTGATAATCAGCAATAACAGGCCACCGACAAATAACACACCAGTGGCGGAATACCCTTTAATGATGTAGCGAGCTACACCCACAAT  >  CP042583/528987‑529546
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                        
  cgtTTGGAAGGCGAAGTCAAGAAGCGACATTTCGGAAGCTTGCGCCGCCAGCACCACATCCCCGGAAGTCGGTGCGAGAATAATCGCCGCCGGGAAGGCACAAATGGCAGCAGCTGCGCAACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCtt                                                                                                                                                                                                                                                                                 <  2:1711268/288‑1 (MQ=255)
     tttGAAGGCGAAGTCAATCAGCGACATTTCGGAAGCTTGCGCCGCCAGCACCACATCCCCTGAAGTCGGTGCGAGAATAATCGCCGCCGGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGac‑c                                                                                                                                                                                                                                                                            <  1:745690/289‑1 (MQ=255)
     tttGAAGGCGAAGTCAATCAGCGACATTTCGGAAGCTTGCGCCGCCAGCACCACATCCCCTGAAGTCGGTGCGAGAATAATCGCCGCCGGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGac‑c                                                                                                                                                                                                                                                                            <  1:369674/289‑1 (MQ=255)
     ttggAAGGCGAAGTCAATCAGCGACATTTCGGAAGCTTGCGCCGCCAGCACCACATCCCCTGAAGTCGGTGCGAGAATAATCGCCGCCGGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGac                                                                                                                                                                                                                                                                              <  1:1022944/285‑1 (MQ=255)
      ttGAAGGCGAAGTCAATCAGCGACATTTCGGAAGCTTGCGCCGCCAGCACCACATCCCCTGAAGTCGGTGCGAGAATAATCGCCGCCGGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGac‑ca                                                                                                                                                                                                                                                                           <  2:1854788/289‑1 (MQ=255)
                   cAATCAGCGACATTTCGGAAGCTTGCGCCGCCAGCACCACATCCCCTGAAGTCGGTGCGAGAATAATCGCCGCCGGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGGTTTGACGCCAGCTTGAC‑CCCCATATCATTccc                                                                                                                                                                                                                                                              >  2:1689506/1‑287 (MQ=255)
                    aatcagcgacATTTCGGAAGCTTGCGCCGCCAGCACCACATCCCCTGAAGTCGGTGCGAGAATAATCGCCGCCGGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTcgcg                                                                                                                                                                                                                                                             <  1:838477/280‑1 (MQ=255)
                    aatcagcgacATTTCGGAAGCTTGCGCCGCCAGCACCACATCCCCTGAAGTCGGTGCGAGAATAATCGCCGCCGGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTcgcg                                                                                                                                                                                                                                                             <  2:1558497/280‑1 (MQ=255)
                    aataagcggcATTTCGGAAGCTTGCGCCGCCAGCACCACAGCCCCTGAGGTCGGTGCGAGACTCATCGCCGCCGGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTcgcg                                                                                                                                                                                                                                                             <  2:32768/280‑1 (MQ=255)
                         gagacATTTCGGACGCTTGCGCCGCCAGCACCACAACCCCTGAAGTGGGTGCGAGAAGAATCGCCGCCGGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTGCCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCGATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGat                                                                                                                                                                                                                                                        <  2:131653/285‑1 (MQ=255)
                          cgacATTTCGGAAGCTTGCGCCGCCAGCACCACATCCCCTGAAGTCGGTGCGAGAATAATCGCCGCCGGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGTGTTAATAAACTGCAATGGGTTTGACGCCCGCTTGAC‑CACCAGATCATTCGCGCCGata                                                                                                                                                                                                                                                       >  1:417707/4‑289 (MQ=255)
                          cgacATTTCGGAAGCTTGCGCCGCCAGCACCACATCCCCTGAAGTCGGTGCGAGAATAATCGCCGCCGGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGata                                                                                                                                                                                                                                                       >  1:643551/4‑289 (MQ=255)
                           gacATTTCGGAAGCTTGCGCCGCCAGCACCACATCCCCTGAAGTCGGTGCGAGAATAATCGCCGCCGGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGata                                                                                                                                                                                                                                                       <  1:1175361/286‑1 (MQ=255)
                                     aaGCCTGCGCCGCACGACCCACATCCCCTGAAGTCGGGGCGAGAATAACCGCCGCCGGGGAGGAAAAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTa                                                                                                                                                                                                                                            <  2:1645064/289‑1 (MQ=255)
                                          tGCGCCGCCAGCACCACATCCCCTGAAGTCGGTGCGAGAATAATCGCCGCCGGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTcgcg                                                                                                                                                                                                                                                             <  1:70572/267‑1 (MQ=255)
                                          tGCGCCGCCAGCACCACATCCCCTGAAGTCGGTGCGAGAATAATCGCCGCCGGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTcgcg                                                                                                                                                                                                                                                             >  2:70572/1‑267 (MQ=255)
                                          tGCGCCGCCAGCACCACATCCCCTGAAGTCGGTGCGAGAATAATCGCCGCCGGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGATTTGACACCAACTTGAC‑CACCAAAACATTAGAGGCGAGATGGGtaagttactcg                                                                                                                                                                                                                                        >  2:654759/1‑278 (MQ=255)
                                          tGCGCCGCCAGCACCACAGCCCCTGAAGTCGGTGCGAGAATAATCGCCGCAGGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCgg                                                                                                                                                                                                                                       <  2:1131046/289‑1 (MQ=255)
                                          tGCGCCGCCAGCAACACATCCCCTGAAGTCGGTGCGAGAATAATCGCCGCCGGGGAGGCACAAATGGCAGCAGCTGCGCCACGTCTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCgg                                                                                                                                                                                                                                       <  1:1388115/289‑1 (MQ=255)
                                                  cAGCACCACATCCCCTGAAGTCGGTGCGAGAATAATCGCCGCCGGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCca                                                                                                                                                                                                                               <  1:337860/289‑1 (MQ=255)
                                                    gaaccacATCCCCTGAAGTCAGTGCGAGAAGAATCGCAGCCGGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCcaca                                                                                                                                                                                                                             <  2:1380703/287‑1 (MQ=255)
                                                    gCACCACATCCCCTGAAGTCGGTGCGAGAATAATCGCCGCCGGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCcaca                                                                                                                                                                                                                             <  1:1124235/289‑1 (MQ=255)
                                                     acccacATCCCCAGAGATCGGTGCGAGAATAATCTCTGCCGGGGGGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGAAAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCcacac                                                                                                                                                                                                                            <  2:1898056/287‑1 (MQ=255)
                                                      accacATCCCCTGAAGTCGGTGCGAGAATAATCGCCGCCGGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCcaca                                                                                                                                                                                                                             <  1:1333314/287‑1 (MQ=255)
                                                        cacaTCCCCTGCAGTCGGTGCGAGAATCAGCGCCGCCGGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTGTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGc                                                                                                                                                                                                                         <  2:545532/289‑1 (MQ=255)
                                                             cccctgaaggcGGTGCGAGAATAAGCGCCGCCAGGGAGAAACAAATGGAAGCAAATGCGCCACGACTGATAACAACGTTTACCAGCAACGGAAATAGGGTTGCAATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GAGAGAAAATAGGCGGCAAGCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGcatcat                                                                                                                                                                                                                    <  2:1108864/279‑1 (MQ=255)
                                                              ccctgaaGTCGGTGCGAGAATAATCGCCGCCGGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATa                                                                                                                                                                                                                   <  2:1056315/283‑1 (MQ=255)
                                                               cctgaaGTCGGTGCGAGAATAATCGCCGCCGGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGac‑cac                                                                                                                                                                                                                                                                          <  2:1422878/228‑1 (MQ=255)
                                                                  gaaGTCGGTGCGAGAATAATCGCCGCCGGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACACCCTCATAaaca                                                                                                                                                                                                               >  2:516032/3‑289 (MQ=255)
                                                                   aaGTCGGTGCGAGAATAATCGCCGCCGGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAatca                                                                                                                                                                                                               >  2:841895/2‑288 (MQ=255)
                                                                     gTCGGTGCGAGAATAATCGCCGCCGGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCAACAGCAGGTAAGGGGAGGTAATATACTGCAATGGATTGTACGCCAGCTTGAC‑CACCAAATCATTCGCCCCGATAAGGGTCATTGAACGGGCAAAGCCACACAGCATCATACtcaaca                                                                                                                                                                                                            >  2:1225025/1‑289 (MQ=255)
                                                                        ggTGCGAGAATAATCGCCGCCGGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTTCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCCTTTAAGAGGCAAATCCACACAGCAACATCACCATCATg                                                                                                                                                                                                          >  2:924995/1‑288 (MQ=255)
                                                                        ggTGCGAGAATAATCGCCGCCGGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAATCGGCAAATCCAACCAGCATCATAAACATCTTg                                                                                                                                                                                                          >  1:148256/1‑288 (MQ=255)
                                                                         gTGCGAGAATAATCGCCGCCGGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGcc                                                                                                                                                                                                        >  1:1081850/1‑289 (MQ=255)
                                                                                    atCGCCGCCGGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGac                                                                                                                                                                                                                                                                              >  1:911090/1‑209 (MQ=255)
                                                                                      cgccgcCGGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTcgccgccg                                                                                                                                                                                           <  1:1041610/289‑1 (MQ=255)
                                                                                       gccgccGGGGAGGGACAAATGGCAGCAGCCGCGCCACGACTGATACCACCGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTcgccgccg                                                                                                                                                                                           <  2:463357/288‑1 (MQ=255)
                                                                                         cgccgGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCgg                                                                                                                                                                                        <  1:516032/289‑1 (MQ=255)
                                                                                         cgccgGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGAGTTGCCATCACCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCgg                                                                                                                                                                                        <  1:1514676/289‑1 (MQ=255)
                                                                                          gccgGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCgg                                                                                                                                                                                        >  1:1422428/1‑288 (MQ=255)
                                                                                               ggAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTGGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCAt                                                                                                                                                                                   <  2:12636/288‑1 (MQ=255)
                                                                                                    cacaAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTa                                                                                                                                                                              <  2:578400/288‑1 (MQ=255)
                                                                                                    cacaAATGGCAGCAGCTGCGCCACGAATGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTa                                                                                                                                                                              <  1:924995/288‑1 (MQ=255)
                                                                                                     acaAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGAGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTaa                                                                                                                                                                             <  1:1258897/288‑1 (MQ=255)
                                                                                                            gcagcaGCTGCGCACCGACTGATACAAACGTTTGCCATCACCGGAAATAGGGTTGCAATCAGCAAAGCACCCAGCCCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GAGACAAAAGAGGCGGCAATCATCAGCAAGTAAGGGGAGTTAATATACTGAAATGGTTTTGACGCCAGCTCGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGGAAATCCACACAGCATCATAATCATCATGCCGAGGGCGCCCCCGCGGCTCATTAGTAATATTTTa                                                                                                                                                                      <  2:375719/288‑1 (MQ=255)
                                                                                                               gcagcTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGt                                                                                                                                                                  >  2:1319743/1‑289 (MQ=255)
                                                                                                                   cTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTGTAACGTAGTc                                                                                                                                                              >  1:932733/1‑289 (MQ=255)
                                                                                                                    tGCGCCACGACTGATACCATCGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTAtt                                                                                                                                                               <  1:1601574/287‑1 (MQ=255)
                                                                                                                             aCTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATAGCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCACCATAATCATCATGCCGAGGTTGCGGCCGTGGCCCATTAGTAATCTTTTAATGTATTAAACGCTATc                                                                                                                                                     >  2:1001467/1‑288 (MQ=255)
                                                                                                                                        cGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTa                                                                                                                                         >  2:1176078/1‑289 (MQ=255)
                                                                                                                                        cGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CAACATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCCCATTAGTAATATTTTAACGTATTCAACGATTACCGTTGCCCTGtt                                                                                                                                         >  2:1778343/1‑288 (MQ=255)
                                                                                                                                            tACCATCACCGGAAATAGGGTTGCCATCAGCTAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAg                                                                                                                                        >  1:812825/1‑286 (MQ=255)
                                                                                                                                            tACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTcgcg                                                                                                                                                                                                                                                             >  1:281719/1‑169 (MQ=255)
                                                                                                                                                  cACCGGAAATAGGGTTGCCATCAGCAAAACACCAAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCTCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGttgaa                                                                                                                               >  1:1717120/1‑285 (MQ=255)
                                                                                                                                                   gccGGAAATAGGGTTAGCATCAACACAACCGCCAGACCCGTTGCGGAAGCGACCGCCAGAGACTACTGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCTCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGttgaag                                                                                                                              <  2:855934/288‑6 (MQ=255)
                                                                                                                                                   aCCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGttgaa                                                                                                                               >  1:102946/1‑284 (MQ=255)
                                                                                                                                                           tAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCctggctg                                                                                                                      <  1:1355408/289‑1 (MQ=255)
                                                                                                                                                             ggagtgcacacAGCAAAACACGCAGAGCGGGAGAGTAAAAGAGGGACAGAGACA‑GAGTCAGTGCGACAAGATAGGCGGCAATCATCAGGAGGTAAGGGGAGTTAATATACTGCAATGGTTATGAGGCGAGATTGAC‑CACCATATCAGTGGCGCGGATATGGGTCAGGGAAGCGGCAAATCCAAACAGAATCATAATGATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAAGATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCGTGTTGAAGCctggctg                                                                                                                      <  2:1853327/277‑1 (MQ=255)
                                                                                                                                                               gTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGa                                                                                                                    <  1:1203206/287‑1 (MQ=255)
                                                                                                                                                                  gCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCCCGGCTCATTAGTAATATTTTAAAGTATTCAACGATAACCGTGGCGCTGTAGTCTGCTGAAGCCTGGAGTGACGGTa                                                                                                               >  2:44195/1‑289 (MQ=255)
                                                                                                                                                                  gCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATAATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTa                                                                                                               >  1:1300541/1‑289 (MQ=255)
                                                                                                                                                                       cAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACt                                                                                                          <  1:44195/289‑1 (MQ=255)
                                                                                                                                                                            aaaCACCCAGACCGGTTGCTGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTtgtg                                                                                                     <  1:1553500/289‑1 (MQ=255)
                                                                                                                                                                                  ccAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCGGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTTGTGCCCCAt                                                                                               >  1:1816993/1‑289 (MQ=255)
                                                                                                                                                                                          gTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTTGTGCCCCATAATGGc                                                                                         >  2:416931/1‑287 (MQ=255)
                                                                                                                                                                                          gTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAACAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCCATCTGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGTCGCCGCGGCTCATAAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGTCTGTTACAGCCTTGCTGGACGGTAACACTTTGTGACCCATAACGGc                                                                                         >  2:933122/1‑287 (MQ=255)
                                                                                                                                                                                          gTTGCGGAAAGGACGGCCAGAGAAAGCAGCCAG‑GCGACAAAATAGGCGGCAAGCATCAGCAGGTAAGGGGAGTTAATATACTGCAAGGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTTGTGCCCCATAATGGCa                                                                                        <  2:618432/288‑1 (MQ=255)
                                                                                                                                                                                                 aaaggaCGGCCAGGAACATACAACAG‑GCAACAAAATTGGCGGCAATCAACAGCAAGGTAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTTGTACCCCATAATGGCACTGATaa                                                                                 <  2:261249/284‑1 (MQ=255)
                                                                                                                                                                                                 aaGGGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTTGTGCCCCATAATGGCACTGATaa                                                                                 <  1:351476/288‑1 (MQ=255)
                                                                                                                                                                                                 aaGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTTGTGCCCCATAATGGCACTGATaa                                                                                 <  1:292533/288‑1 (MQ=255)
                                                                                                                                                                                                                    cAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCCCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTTGTGCCCCATAATGGCACTGATAATCAGCAATAACAGGCCAcc                                                              >  2:1869906/1‑288 (MQ=255)
                                                                                                                                                                                                                    cAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATAAACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTTGTGCCCCATAATGGCACTGATAATCAGCAATAACAGGCCACCg                                                             <  1:708677/289‑1 (MQ=255)
                                                                                                                                                                                                                          g‑gCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTTGTGCCCCATAATGGCACTGATAATCAGCAATAACAGGCCACCGACAAAt                                                       >  2:1720302/1‑289 (MQ=255)
                                                                                                                                                                                                                            gCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTTGTGCCCCATAATGGCACTGATAATCAGCAATAACAGGCCACCGACAAATa                                                      >  2:491334/1‑289 (MQ=255)
                                                                                                                                                                                                                             cGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGttgaag                                                                                                                              >  1:1139248/1‑211 (MQ=255)
                                                                                                                                                                                                                             cGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTtgt                                                                                                      >  1:1510179/1‑240 (MQ=255)
                                                                                                                                                                                                                             cGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTtgt                                                                                                      <  2:1510179/240‑1 (MQ=255)
                                                                                                                                                                                                                                     tAGGCGGCAATCACCAGCAGGTAAGGGGAGTTAATATACGGCAATGGTTTTGCCGCCAGCGTGAC‑CACCATATCGTTCACGCCGATATGGGTCAGGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTTGTGCCCCATAATGGCACTGATAATCAGCAATAACAGGCCACCGACAAATAACACACCAg                                             <  2:310091/289‑1 (MQ=255)
                                                                                                                                                                                                                                        gcgggAATCATCAGCACGTAAGGGGAGTTAATAGACTTCACTGGGTTTGACGCCAGCTTGAC‑CACCATCTCATTCGCGCCGTTATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCGTGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTTGTGCCCCATAATGGCACTGATAATCAGCAATAACAGGCCACCGACAAATAACACACCAGTg                                           <  2:1359483/288‑1 (MQ=255)
                                                                                                                                                                                                                                             aaTCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTTGTGCCCCATAATGGCACTGATAATCAGCAATAACAGGCCACCGACAAATAACACACCAGTGGCGGa                                      <  1:657290/288‑1 (MQ=255)
                                                                                                                                                                                                                                              atcatcAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTTGTGCCCCATAATGGCACTGATAATCAGCAATAACAGGCCACCGACAAATAACACACCAGTGGCGGAAt                                    <  1:1889727/289‑1 (MQ=255)
                                                                                                                                                                                                                                               tcatcaGCAGGTAAGGGAAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATGCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTTGTGCCCCATAATGGCACTGATAATCAGCAATAACAGGCCACCGACAAATAACACACCAGTGGCGGAATa                                   <  1:556164/289‑1 (MQ=255)
                                                                                                                                                                                                                                                       agGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTTGTGCCCCATAATGGCACTGATAATCAGCAATAACAGGCCACCGACAAATAACACACCAGTGGCGGAATACCCtt                              <  1:1648491/286‑1 (MQ=255)
                                                                                                                                                                                                                                                       agGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCAGTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTTGTGCCCCATAATGGCACTGATAATCAGCAATAACAGGCCACCGACAAATAACACACCAGTGGCGGAATACCCtt                              <  1:1225025/286‑1 (MQ=255)
                                                                                                                                                                                                                                                         gTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTTGTGCCCCATAATGGCCCTGATAATCAGCAATAACAGGCCACCGCCAAATAACACACCAGTGGCGGAATACCCTTTAatg                         >  1:1873499/1‑289 (MQ=255)
                                                                                                                                                                                                                                                          tagcggacgtaaagataCTCCAATGGTTTTCAGTCCAGCTTGCCACACCGT‑TCATCCTCGCCGGTATGGGTCATGTAAGCGGCAAATCCACACCGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTTGTGCCCCATAATGGCACTGATAATCAGCAATAACAGGCCACCGACAAATAACACACCAGTGGCGGAATACCCTTTAatg                         <  2:1816993/274‑1 (MQ=255)
                                                                                                                                                                                                                                                               ggAGTTAAAATCCGGAAATGGTTTTGCAGACGGCTTGAC‑CCCCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACCCAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTTGTGCCCCATAATGGCACTGATAATCAGCAATAACAGGCCACCGACAAATAACACACCAGTGGCGGAATACCCTTTAATGATGTa                    <  2:1029389/288‑1 (MQ=255)
                                                                                                                                                                                                                                                               gaaGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTTGTGCCCCATAATGGCACTGATAATCAGCAATAACAGGCCACCGACAAATAACACACCAGTGGCGGAATACCCTTTAATGATGTa                    <  1:1001467/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                   ttAATATACTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTTGTGCCCCATAATGGCACTGATAATCAGCAATAACAGGCCACCGACAAATAACACACCAATGGCGGAATACCCTTTAATGATGTAGCGAg               >  1:161514/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                         taCTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTTGTGCCCCATAATGGCACTGATAATCAGCAATAACAGGCCACCGACAAATAACACACCAGTGGCGGAATACCCTTTAATGATGTAGCGAGCTacac         <  2:726213/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                          aCTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTTGTGCCCCATAATGGCACTGATAAACAGCAATAACAGGCCACCGACAAATAACACACACGTGGAGGAATACCCTTTTACGTTGTACAGAGcaccac         >  2:1212267/1‑283 (MQ=255)
                                                                                                                                                                                                                                                                           cTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTTGTGCCCCATAATGGCACTGATAATCAGCAATAACAGGCCACCGACAAATAACACACCAGTGGCGGAATACCCTTTAATGATGTAGCGAg               <  2:757119/281‑1 (MQ=255)
                                                                                                                                                                                                                                                                           cTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTTGTGCCCCATAATGGCACTGATAATCAGCAATAACAGGCCACCGACAAATAACACACCAGTGGCGGAATACCCTTTAATGATGTAGCGAg               >  1:757119/1‑281 (MQ=255)
                                                                                                                                                                                                                                                                           cTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTTGTGCCCCATAATGGCACTGATAATCAGCAATAACAGGCCACCGACAAATAACACACCAGTGGCGGAATACCCTTTAATGATGTAGCGAGCTACAccc       >  1:1534295/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                           cTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTTGTGCCCCATAATGGCACTGATAATCAGCAATAACAGGCCACCGACAAATAACACACCAGTGGCGGAATACCCTTTAATGATGTAGCGAGCTACAcc        >  1:405126/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                           cTGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTTGTGCCCCATAATGGCACTGATAATCAGCAATAACAGGCCACCGACAAATAACACACCAGTGGCGGAATACCCTTTAATGATGTAGCGAGCTACAcc        >  2:795299/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                            tGCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTTGTGCCCCATAATGGCACTGATAATCAGCAATAACAGGCCACCGACAAATAACACACCAGTGGCGGAATACCATTTAATGATGTAGCGAGCTACACCca      >  1:1783034/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                             gCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTTGTGCCCCATAATGGCACTGATAATCAGCAATAACAGGCCACCGACAAATAACACACCAGTGGCGGaa                                     >  1:224020/1‑257 (MQ=255)
                                                                                                                                                                                                                                                                             gCAATGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTTGTGCCCCATAATGGCACTGATAATCAGCAATAACAGGCCACCGACAAATAACACACCAGTGGCGGAATa                                   <  2:28227/259‑1 (MQ=255)
                                                                                                                                                                                                                                                                                aTGGTTTTGACGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTTGAAGCCTGGCTGGACGGTAACACTTTGTGCCCCATAATGGCACTGATAATCAGCAATAACAGGCCACCGACAAATAACACACCAGTGGCGGAATACCCTTTAATGATGTAGCGAGCTACACCCACAAt  <  1:1869379/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                        
GTCGTTTTGAAGGCGAAGTCAATCAGGCTCATTTCGGAAGCTTGCGCCGCCAGCACCACATCCCCACTAGTCGGTGCGAGAATAATCGCCGCCGGGGAGGCACAAATGGCAGCAGCTGCGCCACGACTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAG‑GCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTACTCGCCAGCTTGAC‑CACCATATCATTCGCGCCGATATGGGTCATGTAAGCGGCAAATCCACACAGCATCATAATCATCATGCCGAGGTCGCCGCCGCGGCTCATTAGTAATATTTTAACGTATTCAACGATATCCGTGGCGCTGTAGCCTGTACTAGCCTGGCTGGACGGTAACACTTTGTGCCCCATAATGGCACTGATAATCAGCAATAACAGGCCACCGACAAATAACACACCAGTGGCGGAATACCCTTTAATGATGTAGCGAGCTACACCCACAAT  >  CP042583/528987‑529546

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A