Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F210 I1 R1
|
4930 |
262.8 |
3829204 |
96.6% |
3699011 |
272.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
591,891 |
3 bp→CGA |
intergenic (–/–) |
– / – |
–/– |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 591,891 | 0 | G | C | 99.7%
| 769.0
/ NA
| 327 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base C (179/146); total (179/148) |
| Fisher's exact test for biased strand distribution p-value = 4.51e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 |
| * | CP042583 | 591,892 | 0 | C | G | 99.4%
| 750.8
/ NA
| 327 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/2); new base G (176/146); total (179/148) |
| Fisher's exact test for biased strand distribution p-value = 2.08e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 |
| * | CP042583 | 591,893 | 0 | T | A | 99.4%
| 778.7
/ NA
| 327 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (179/146); minor base G (0/2); total (179/148) |
| Fisher's exact test for biased strand distribution p-value = 2.04e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 328 total aligned reads displayed.
TTTACCACACAATCCATCCACATATTACGACCGCTGACACCTTCATGCATTTTGGCGTTGATATTCAGTGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGACTAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGGCTAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCACTGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACAGCGAGGCGGAAAGGACGAGCCTCTTTTGCCCGCTGCGGTGCGACTTCCGCGATCAGCTCACGCAGGTAACTTTCTTCAAAACAGTGCGCATCAATGCCACCGATAAAGCCATACGGGTTACGTGCCGTTTCCAGATAAAC > CP042583/591613‑592175
|||
acaccATCCATCCACATATTACGACCGCTGACACCTTCATGCATTTTGGCGTTGATATTCAGTGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCcatca < 1:996082/289‑1 (MQ=255)
acacaATCCATCCACATATTACGACCGCTGACACCTTCATGCATTTTGGCGTTGATATTCAGTGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCcatca < 2:1377268/289‑1 (MQ=255)
ccattccatcccCATTTTACGCCCGCTGACACCTTCATGCATTTTGGCGTTGATATTCAGTGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCatcatc < 2:554641/285‑1 (MQ=255)
tccatccaCATATTACGACCGCTGACACCTTCATGCATTTTGGCGTTGATATTCAGTGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGaa > 2:1908560/1‑289 (MQ=255)
tccatccaCATATTACGACCGCTGACACCTTCATGCATTTTGGCGTTGATATTCAGTGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGaa > 1:383873/1‑289 (MQ=255)
tccatccaCATATTACGACCGCTGACACCTTCATGCATTTTGGCGTTGATATTCAGTGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGCGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCACCAGCGGCGAAC‑AG‑TCCGCCACCATCGGaa > 2:1225042/1‑289 (MQ=255)
ccatccaCATATTACGACCGCTGACACCTTCATGCATTTTGGCGTTGATATTCAGTGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAAt < 1:1367682/289‑1 (MQ=255)
ccaCATATTACGACCGCTGACACCTTCATGCATTTTGGCGTTGATATTCAGTGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATaa > 1:1275647/1‑287 (MQ=255)
atatTACGACCGCTGACACCTTCATGCATTTTGGCGTTGATATTCAGTGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGtt < 1:1837227/289‑1 (MQ=255)
atatTACGACCGCTGACACCTTCATGCATTTTGGCGTTGATATTCAGTGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGtt < 1:1161356/289‑1 (MQ=255)
atatTACGACCGCGGTCACCTTCATGCAGTTTGGCGTTGATATTCAGTGCGGCAAACAGCGGATAGGAGGGGGTGGTGGAGGCGTGCATGATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAACAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGtt < 2:1868489/289‑1 (MQ=255)
tatTACGACCGCTGACACCTTCATGCATTTTGGCGTTGATATTCAGTGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTc > 1:33235/1‑289 (MQ=255)
tatTACGACCGCTGACACCTTCATGCATTTTGGCGTTGATATTCAGTGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTc > 1:242363/1‑289 (MQ=255)
tatTACGACCGCTGACACCTTCATGCATTTTGGCGTTGATATTCAGTGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTc > 2:1726557/1‑289 (MQ=255)
tatTACGACCGCTGACACCTTCATGCATTTTGGCGTTGATATTCAGTGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGGTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTc > 1:185968/1‑289 (MQ=255)
tatTACGACCGCTGACACATTCATGCATGTTGGCGTTGATATTCAGTGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCCTCATAGAGGCGTTGTTCATGCGTTTGTGCGGTACATAGCGCTGTTGCCCTTTGAGGTGGCTGACTTTTTTAGGAATTTGGGAAGTCTGAGAACAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCCGAATACCCGGATCGTTCCCATTAAGATACAGCACCGTCGGCGAAC‑AT‑TCCGCCACCATCGGAACAACCTGtt > 2:1524096/1‑288 (MQ=255)
tACGACCGCTGACACCTTCATGCATTTTGGCGTTGATATTCAGTGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATa > 1:471525/1‑289 (MQ=255)
aCGACCGCTGACACCTTCATGCATTTTGGCGTTGATATTCAGTGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATaaa < 1:442607/279‑1 (MQ=255)
aCGACCGCTGACACCTTCATGCATTTTGGCGTTGATATTCAGTGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAg < 1:737385/289‑1 (MQ=255)
gACCGCTGACACCTTCATGCATTTTGGCGTTGATATTCAGTGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGcc < 1:542133/289‑1 (MQ=255)
cGCTGACACCTTCATGCATTTTGGCGTTGATATTCAGTGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGa > 2:143899/1‑288 (MQ=255)
cGCTGACACCTTCATGCATTTTGGCGTTGATATTCAGTGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGa > 1:1797438/1‑288 (MQ=255)
cTGACACCTTCATGCATTTTGGCGTTGATATTCAGTGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGAccc > 1:368830/1‑289 (MQ=255)
cTGACACCTTCATGCATTTTGGCGTTGATATTCAGTGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGAccc > 2:381925/1‑289 (MQ=255)
acCTTCATGCATTTTGGCGTTGATATTCAGTGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGct < 1:153455/289‑2 (MQ=255)
gCATTTTGGCGTTGATATTCAGTGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCaaa < 2:567905/289‑1 (MQ=255)
gCATTTTGGCGTTGATATTCAGTGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCaaa < 1:1075864/289‑1 (MQ=255)
tttGGCGTTGATATTCAGTGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAgg > 1:827100/1‑289 (MQ=255)
ttGGCGTTGATATTCAGTGCGGCAATCAGCGTATAGAACGGGCTGGGGCAGGGGTGCATCATAAAGGCGTGGTTCATGCGTTTGTGCGGTACATAACGCGGTTGCCCTTTGATGTAGCTTTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATGATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGa < 2:531751/289‑1 (MQ=255)
ttGGCGTTGATATTCAGTGCGGCAAGCAGCGGATAGAACGGGCTGGTGGAGGTGTGCATCATAAAGGAGTTGTTCAGGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGGTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGa < 1:1266930/289‑1 (MQ=255)
ttGGCGTTGATATTCAGTGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGa < 1:68385/289‑1 (MQ=255)
ggCGTTGATATTCAGTGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATg < 1:649427/289‑1 (MQ=255)
cGTTGATATTCATGGCGGCAAACAGCGGATGGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGt < 2:442574/288‑1 (MQ=255)
tGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCcatca > 1:128365/1‑227 (MQ=255)
tGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATg > 1:1323385/1‑288 (MQ=255)
tGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATg > 1:961200/1‑288 (MQ=255)
gCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCaaa > 1:708732/1‑263 (MQ=255)
cGGGTAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATc < 1:870698/288‑1 (MQ=255)
aCGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCCCCACTTg > 2:124935/1‑289 (MQ=255)
gggCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCGGAGTCAAACAGGATGTAGTCACACAGCAGACCAAGTTTATCGACCACTTgg > 2:870698/1‑288 (MQ=255)
gCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAACCAGGATGTAGTCACACAGATGAACAATTTTATCCACCACTTgacgg > 1:1602534/1‑289 (MQ=255)
gCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTggcgg > 1:1585203/1‑289 (MQ=255)
gCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATaaa > 1:808381/1‑289 (MQ=255)
gCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTCGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGTTCCAGCAACAGCCGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATCGCCGACCAATGCTGAGTCAACCAGGATGTAGTCACCCAACTGACCACTTTTACCCACCACTTGGCGGCCGGCATaaa > 2:1643319/1‑289 (MQ=255)
ggcgcacaaaGTCGTTGTTAATGGTTTTTTGGGGGACATAACGCTGTTGCCCGTTGATGTGGCTGTATATTTTATGAATTGGTGGATGCTGAGAAAAGCCAGCCTGATGTTTATGCACAGATGGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGC‑GGCGACAAG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGTATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGt < 2:669406/282‑1 (MQ=255)
gCATCATATCGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGCTGTTGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTCTGCACAGATTGCGTAACCAGAATACCCGTATCGTTCTCATTAAGATCCCGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCCTAGCCGACCCCTGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAAATTTATCCCCCACTTGGCGGGCCTTaaaacccgt > 2:1110513/1‑284 (MQ=255)
gCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGt > 1:1506204/1‑289 (MQ=255)
gCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGt > 1:272333/1‑289 (MQ=255)
catcatAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGt > 2:75998/1‑288 (MQ=255)
catcatAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGt > 1:208425/1‑288 (MQ=255)
atcatAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTa < 1:929752/288‑1 (MQ=255)
atcatAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTa < 1:1889011/288‑1 (MQ=255)
tcatAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTAcc < 1:1427887/289‑1 (MQ=255)
aatgCGTTGTTCCTGCGTTTGTGCGGTACATAACGCTGGTGCCCTTTGATGTGGCTGTCTTTTTTATGCATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACcgtcgt < 2:1498677/286‑1 (MQ=255)
aaGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACcgtcgt < 1:763729/289‑1 (MQ=255)
aaGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACcgtcgt < 2:320231/289‑1 (MQ=255)
tCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTaa < 1:1664139/289‑1 (MQ=255)
tgtgCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGGAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTGCATAGCCGACCCATGCTGAGGCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGCCTGGCGTTATAAATCGTACCGTCGTAGGTTCCCAACTGaactca > 2:1674816/1‑285 (MQ=255)
tgtgCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGAACAGATTGCGTAACCAGCATACCCGGAGCGTTCTCATTAAGATCCAGCAACAGCGGCAAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATCCTGAGTCAAACAGGATGTAGTCACACAGATGACCAACTTTATCCACCAATGGGCGGGCGTTCTAAATCGTACCGACGTAGGTTCCTAACTGAATcac > 2:1763929/1‑289 (MQ=255)
gCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACAGc < 2:808381/289‑1 (MQ=255)
tACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTggcgg < 1:103554/241‑1 (MQ=255)
tACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTggcgg > 2:103554/1‑241 (MQ=255)
aaCGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACAGCGAGGCGGaa > 2:539220/1‑289 (MQ=255)
cGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGGGTCAAACAGGATGTAGTCACACAGCTGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCGAACTGAATCACAGCACGGCGGAAAg > 2:478361/1‑289 (MQ=255)
tGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCTATGCTGAGTCAAACAGGATGTAGTCCCACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACAGCGAGGCGGAAAGGa > 2:240089/1‑288 (MQ=255)
tGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACAGCTAGGCGGAAAGGAc > 1:262696/1‑289 (MQ=255)
tGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACAGCGAGGCGGAAAGGAc > 2:360353/1‑289 (MQ=255)
tGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACAGCGAGGCGGAAAGGAc > 1:1639205/1‑289 (MQ=255)
tGTTGACCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑GCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACAGCGAGGCGGAAAGGa < 2:259197/288‑1 (MQ=255)
tGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACAGCGAGGCGGAAAGGACGAg < 1:1726557/289‑1 (MQ=255)
gCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACAGCGAGGCGGAAAGGACGAGc < 2:827100/289‑1 (MQ=255)
tGATGTGGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACAGCGAGGCGGAAAGGACGAGCCTCttt > 1:617345/1‑289 (MQ=255)
gtgGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGCAGGTGCCTAACTGAATCACAGCGAGGCGGAAAGGACGAGCCTATTTTGc > 2:1288466/1‑288 (MQ=255)
tgGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACAGCGTGGCGGAAAGGACGAGCCTCTTTTGcc > 2:1617930/1‑288 (MQ=255)
tgGCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACAGCGAGGCGGAAAGGACGAGCCTCTTTTGccc > 1:1027928/1‑289 (MQ=255)
ggCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACAGCGAGGCGGAAAGGACGAGCCTCTTTTGCCCg < 1:585387/289‑1 (MQ=255)
gCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGa < 2:118554/173‑1 (MQ=255)
gCTGTCTTTTTTATGAATTTGTGAAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGa > 1:118554/1‑173 (MQ=255)
gtATGAATTTTTTAAGTCTGAAAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACAGCGAGGCGGAAAGGACGAGCCTCTTTTGCCCGCTGCGGTGCGa < 2:711041/288‑1 (MQ=255)
tgtgaaGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACAGCGAGGCGGAAAGGACGAGCCTCTTTTGCCCGCTGCGGTGCGACTTCCGCGa < 1:534759/284‑1 (MQ=255)
cTGAGAAAAACCAGCCTTTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCGTAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTGGTAGGTGCCTAACTGAATCACAGCGAGGCGGAAAGGACGAGCCTCTTTTGCCCGCTGCGGTGCGACTTCCGCGATCAGCTCa < 2:210166/289‑1 (MQ=255)
tGAGAAAAACCAACCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACAGCGAGGCGGAAAGGACGAGCCTCTTTTGCCCGCTGCGGTGCGACTTCCGCGATCAGCCCa > 2:648130/1‑288 (MQ=255)
aCCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACAGCGAGGCGGAAAGGACGAGCCTCTTTTGCCCGCTGCGGTGCGACTTCCGCGATCAGCTCACGCAGGTa > 1:1299989/1‑288 (MQ=255)
cAGCCTATGTTTTATGCACGGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGAGAGAGCGGCGAAC‑TG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACCGCGAGGCGGAAAGGACTAGCCTCTTTTGCCCGCTGCGGTGCGACTTCCGCGATCAGCTCACGCAGGTAACt < 2:937994/289‑1 (MQ=255)
cTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACAGCGAGGCGGAAAGGACGAGCCTCTTTTGCCCGCTGCGGTGCGACTTCCGCGATCAGCTCACGCAGGTAACttt < 1:110530/287‑1 (MQ=255)
gcccgtttcggTAACAAGAATCACCGGCTAGTTCTCATCAAGTTCCAGGCACAG‑GGCCGAC‑AGAACCGCCACAATCGGAATAAACTTTTAATACCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGATATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACAGCGAGGCGGAAAGGACGAGCCTCTTTTGCCCGCTGCGGTGCGACTTCCGCGATCAGCTCACGCAGGTAACTTTCTTCAAAACAGTg < 2:594979/278‑1 (MQ=255)
acaGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACAGCGAGGCGGAAAGGACGAGACTCTTTTGCCCGCTGCGGTGCGACTTCCGAGATCAGCTCACGCAGGTAACTTTCTTCAAAACAGTga > 1:1115135/1‑287 (MQ=255)
gATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACAGCGAGGCGGAAAGGACGAGCCTCTTTTGCCCGCTGCGGTGCGACTTCCGCGATCAGCTCACGCAGGTAACTTTCTTCAAAACAGTGCGCa > 2:1797819/1‑288 (MQ=255)
gAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACAGCGAGGCGGAAAGGACGAGCCTCTTTTGCCCGCTGCGGTGCGACTTCCGCGATCAGCTCACGCAGGTAACTTTCTTCAAAACAGTGCGCATCAATGCCACCGAt > 1:901487/1‑289 (MQ=255)
aaTACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACAGCGAGGCGGAAAGGACGAGCCTCTTTTGCCCGCTGCGGTGCGACTTCCGCGATCAGCTCACGCAGGTAACTTTCTTCAAAACAGTGCGCATCAATGCCACCGATa > 1:1214594/1‑289 (MQ=255)
aTACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACAGCGAGGCGGAAAGGACGAGCCTCTTTTGCCCGCTGCGGTGCGACTTCCGCGATCAGCTCACGCAGGTAACTTTCTTCAAAACAGTGCGCATCAATGCCACCGATaa > 1:1136431/1‑289 (MQ=255)
ccGGATCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACAGCGAGGCGGAAAGGACGAGCCTCTTTTGCCCGCTGCGGTGCGACTTCCGCGATCAGCTCACGCAGGTAACt < 2:885746/250‑1 (MQ=255)
aTCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACAGCGAGGCGGAAAGGACGAGCCTCTTTTGCCCGCTGCGGTGCGACTTCCGCGATCAGCTCACGCAGGTAACTTTCTTCAAAACAGTGCGCATCAATGCCACCGATAAAGCCATa < 2:159535/288‑1 (MQ=255)
tCGTTCTCATTAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACAGCGAGGCGGAAAGGACGAGCCTCTTTTGCCCGCTGCGGTGCGACTTCCGCGATCAGCTCACGCAGGTAACTTTCTTCAAAACAGTGCGCATCAATGCCACCGATAAAGCCATAc < 2:489948/288‑1 (MQ=255)
ttCTCATTCAGATCCCGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACTAATTTTATCCACCACTTGGCGGGCGTTATACATCGTACCGTCGTAGGTGCCTAACTTAATCACAGCGAGGCGGAAAGGACGAGCATCTTTTGCCCGCTGCGGACCTACTTCCGCGATCAGCTCCCTCCGGTACCGTTTTTCCAAATCGTGAGCACCAATCCCACTGACAATGCCTTACGGGt > 2:1062637/1‑289 (MQ=255)
ttAAGATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACAGCGAGGCGGAAAGGACGAGCCTCTTTTGCCCGCTGCGGTGCGACTTCCGCGATCAGCTCACGCAGGTAACTTTCTTCAAAACAGTGCGCATCAATGCCACCGATAAAGCCATACGGGTTACGTg < 2:1278858/289‑1 (MQ=255)
gATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACAGCGAGGCGGAAAGGACGAGCCTCTTTTGCCCGCt > 1:143692/1‑195 (MQ=255)
gATCCAGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACAGCGAGGCGGAAAGGACGAGCCTCTTTTGCCCGCTGCGGTGCGACTTCCGCGATCAGCTCACGCAGGTAACTTTCTTCAAAACAGTGCGCATCAATGCCACCGATAAAg < 2:1328555/269‑1 (MQ=255)
aGCAACAGCGGCGAAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCTGAGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACAGCGAGGCGGAAAGGACGAGCCTCTTTTGCCCGCTGCGGTGCGACTTCCGCGATCAGCTCACGCAGGTAACTTTCTTCAAAACAGTGCGCATCAATGCCACCGATAAAGCCATACGGGTTACGTGCCGTTTCCa > 1:1015459/1‑289 (MQ=255)
cggcgtAC‑CG‑TCCGCCAACATCGGAATAAACTGATCATAGCCGACCCATGCTGAGTCAACCCAGATGTAGTCACACAGATCACCAATTTTATCCACCACATGGCGTTCGTTATAACTCGTACCGTCGTAGGTGCCTAACTGAATCACAGCGGGGCGGAAAGGACGAGACGCTTTTGCCCGCTGCGGTGCGACTTCCGCGATCAGCTCACGCAGGTAACTTTCTTCAAAACAGTGCGCATCAATGCCACCGATAAAGCCATACGGGTTACGTGCCGTTTCCAGATAAAc < 2:1115135/283‑1 (MQ=255)
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TTTACCACACAATCCATCCACATATTACGACCGCTGACACCTTCATGCATTTTGGCGTTGATATTCAGTGCGGCAAACAGCGGATAGAACGGGCTGGTGGAGGCGTGCATCATAAAGGCGTTGTTCATGCGTTTGTGCGGTACATAACGCTGTTGCCCTTTGATGTGGCTGTCTTTTTTATGAATTTGACTAGTCTGAGAAAAACCAGCCTGTTGTTTATGCACAGATTGCGTAACCAGAATACCCGGATCGTTCTCATTAAGATCCAGCAACAGCGGGCTAC‑AG‑TCCGCCATCATCGGAATAAACTGTTCATAGCCGACCCATGCACTGTCAAACAGGATGTAGTCACACAGATGACCAATTTTATCCACCACTTGGCGGGCGTTATAAATCGTACCGTCGTAGGTGCCTAACTGAATCACAGCGAGGCGGAAAGGACGAGCCTCTTTTGCCCGCTGCGGTGCGACTTCCGCGATCAGCTCACGCAGGTAACTTTCTTCAAAACAGTGCGCATCAATGCCACCGATAAAGCCATACGGGTTACGTGCCGTTTCCAGATAAAC > CP042583/591613‑592175
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A