Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F210 I1 R1
|
4930 |
262.8 |
3829204 |
96.6% |
3699011 |
272.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
607,539 |
3 bp→TCG |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 607,539 | 0 | A | T | 98.8%
| 596.0
/ NA
| 258 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (121/132); minor base G (2/1); total (124/134) |
| Fisher's exact test for biased strand distribution p-value = 6.09e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 607,540 | 0 | G | C | 99.2%
| 593.2
/ NA
| 258 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base C (122/133); total (124/134) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 607,541 | 0 | C | G | 99.2%
| 601.4
/ NA
| 258 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (1/0); major base G (122/133); minor base T (1/1); total (124/134) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 258 total aligned reads displayed.
TGTTGAGTTCGAAACTGATGGGTGGTTTGCTCTGACGGGTGCCGGTTGCGAAGCGCGGCTGGATGATAATGCCGTCTGGACCGGCTGGCGATTGCCGATGAAAGCAGGCCAGCGTTTAACGCTTAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCAGTTGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑AAGCAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCAGCCAGGATGCATTCTGGCGTAGCCCCTGGCAGCTTAGCAGCCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATCGCGAACTGTTATCTCACGGTTTGTTACCGGGCGTGGTGCAGGTGCCACATAACGGGCAGCCGATTGTGTTGATGA > CP042583/607259‑607815
|||
tgtttggTTCGAAACTGATGGGTGGGTTGGTCTGGCGGGTGCCGGTTGGGAAGGGCGGCTGGATGGTAATGCCGTATGGACCGGCTGGCGATTGCCGATGAAAGCAGGCCAGCGTTTAACGCTTAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGt < 2:1788489/283‑1 (MQ=255)
tGTTGAGTTCGAAACTGATGGGTGGTTTGCTCTGACGGGTGCCGGTTGCGAAGCGCGGCTGGATGATAATGCCGTCTGGACCGGCTGGCGATTGCCGATGAAAGCAGGCCAGCGTTTAACGCTTAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGt < 1:1859562/289‑1 (MQ=255)
gTTGAGTTCGAAACTGATGGGTGGTTTGCTCTGACGGGTGCCGGTTGCGAAGCGCGGCTGGATGATAATGCCGTCTGGACCGGCTGGCGATTGCCGATGAAAGCAGGCCAGCGTTTAACGCTTAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTg > 1:1106557/1‑289 (MQ=255)
gTTGAGTTCGAAACTGATGGGTGGTTTGCTCTGACGGGTGCCGGTTGCGAAGCGCGGCTGGATGATAATGCCGTCTGGACCGGCTGGCGATTGCCGATGAAAGCAGGCCAGCGTTTAACGCTTAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTg > 1:1315623/1‑289 (MQ=255)
cGAAACTGATGGGTGGTTTGCTCTGACGGGTGCCGGTTGCGAAGCGCGGCTGGATGATAATGCCGTCTGGACCGGCTGGCGATTGCCGATGAAAGCAGGCCAGCGTTTAACGCTTAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATg < 1:1201605/289‑1 (MQ=255)
cGAAACTGATGGGTGGTTTGCTCTGACGGGTGCCGGTTGCGAAGCGCGGCTGGATGATAATGCCGTCTGGACCGGCTGGCGATTGCCGATGAAAGCAGGCCAGCGTTTAACGCTTAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGGGGGGATTGGCGGGCTGGAAGGCCGTTTACGGAAGGCTGGTGACCGACTCCCGATTGGCCA‑ATCGAAGCGCGCTTCtgtg > 2:1524882/1‑289 (MQ=255)
aaCTGATGGGTGGTTTGCTCTGACGGGTGCCGGTTGCGAAGCGCGGCTGGATGATAATGCCGTCTGGACCGGCTGGCGATTGCCGATGAAAGCAGGCCAGCGTTTAACGCTTAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGaa > 1:550975/1‑289 (MQ=255)
tGGGTTGTTTGCTCTGACGGGGGCCGGTTGGGAAGCGCGGCTGGATGATAAGGCCGTCTGGACCGGCTGGCGATTGCCGATGAAAGCAGGCCAGCGTTTAACGCTTAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCa < 2:233450/288‑1 (MQ=255)
tGGGTGGTTTGCTCTGACGGGTGCCGGTTGCGAAGCGCGGCTGGATGATAATGCCGTCTGGACCGGCTGGCGATTGCCGATGAAAGCAGGCCAGCGTTTAACGCTTAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCa < 2:1102968/288‑1 (MQ=255)
tGGGTGGTGTGCGCGGACGGGTGCCGGTTGGGAAGCGCGGCTGGATGATCAGGCCGTCTGGACCGGCTGGCGATTGCCGATGAAAGCAGGCCAGCGTTTAACGCTTAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTAGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCa < 2:1076072/288‑1 (MQ=255)
tggtTTGCTCTGACGGGTGCCGGTTGCGAAGCGCGGCTGGATGATAATGCCGTCTGGACCGGCTGGCGATTGCCGATGAAAGCAGGCCAGCGTTTAACGCTTAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGCTCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGGGACCGAACCCCGAGTGGCAC‑AGCGCAGCGTAGTTCTAAGGAAggccgagggt > 2:82101/1‑280 (MQ=255)
tctGACGGGTGCCGGTTGCGAAGCGCGGCTGGATGATAATGCCGTCTGGACCGGCTGGCGATTGCCGATGAAAGCAGGCCAGCGTTTAACGCTTAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCa < 1:330207/276‑1 (MQ=255)
tGACGGGTGCCGGTTGCGAAGCGCGGCTGGATGATAATGCCGTCTGGACCGGCTGGCGATTGCCGATGAAAGCAGGCCAGCGTTTAACGCTTAAACGCCCGCAGCACGGGATGCGCATTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACa > 1:537017/1‑286 (MQ=255)
tGACGGGTGCCGGTTGCGAAGCGCGGCTGGATGATAATGCCGTCTGGACCGGCTGGCGATTGCCGATGAAAGCAGGCCAGCGTTTAACGCTTAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAgc > 2:1824149/1‑288 (MQ=255)
tGCCGGTTGCGAAGCGCGGCTGGATGATAATGCCGTCTGGACCGGCTGGCGATTGCCGATGAAAGCAGGCCAGCGTTTAACGCTTAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑CTCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCA‑GTgg > 2:1535131/1‑289 (MQ=255)
tGCCGGTTGCGAAGCGCGGCTGGATGATAATGCCGTCTGGACCGGCTGGCGATTGCCGATGAAAGCAGGCCAGCGTTTAACGCTTAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTgg > 1:110067/1‑289 (MQ=255)
tGCCGGTTGCGAAGCGCGGCTGGATGATAATGCCGTCTGGACCGGCTGGCGATTGCCGATGAAAGCAGGCCAGCGTTTAACGCTTAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTgg > 1:1442417/1‑289 (MQ=255)
tGCCGGTTGCGAAGCGCGGCTGCATGATAATGCCGTCTGGACCGGCTGGCGATTGCCGCTGAAAGCAGGCTAGCGTTTAACGCTTAAACGCCCGCAGCACGGGGTGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATCTTCTGCCGGTCATGGGCTCATGCAGCACCGAACTCAAGGAGGGGCTTCGCGCGCTGGAAGGCCGTTTACTGTAGGATGCTGCCCGACTCCCTATTGCCAA‑AGCTAAGCGTGAGTCCATGGGAGTGGAAGGCGTTAAACATCCGCc‑gtga > 2:1252419/1‑288 (MQ=255)
tgatAATGGCGTCTGGACCGGCTGGGGATGGCCGATGGAAGCGGGCCAGCGTTTAACGCTTAAACGGCCGCAGCACGGGATGCGAAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTAGGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGcc < 2:828260/288‑1 (MQ=255)
tAATGCCGTCGGGACGGGCTGGCGAGTGCAGATGAAAGCAGGCCAGCGTTTAACGCTTAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCgggg < 2:1050485/289‑1 (MQ=255)
aggCCGGCGGGACCGGCTGGCGATTGCCGATGAAAGCGGGCCAGCGTTTAACGCTTAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGcc < 2:1636845/287‑1 (MQ=255)
aTGCCGTCTGGACCGGCTGGCGATTGCCGATGAAAGCAGGCCAGCGTTTAACGCTTAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGcc > 2:1702404/1‑289 (MQ=255)
gCCGTCTGGACCGGCTGGCGATTGCCGATGAAAGCACGCCAGCGTTTAACGCTTAAACGCCCGCAGCACCGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCAACGATCTCACAGTGGGGGTTGGCGGGCTGGAAGGCCGTTTAGTGAATGATGGGGACCGACTCCCGAATGGCAACCCGCAA‑CGTGAACCTATGGAAGCCGAGGCCGGTACACAACCCCTCGTGGGGC‑ACCGCATGCCGGACTTGCCgggacagg > 2:315341/1‑284 (MQ=255)
cGTCTGGACCGGCTGGCGATTGCCGATGAAAGCAGGCCAGCGTTTAACGCTTAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGaa < 2:771658/289‑1 (MQ=255)
tGGACCGGCTGGCGATTGCCGATGAAAGCAGGCCAGCGTTTAACGCTTAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATc < 2:302433/289‑1 (MQ=255)
tGGACCGGCTGGCGATTGCCGATGAAAGCAGGCCAGCGTTTAACGCTTAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATc < 1:1251873/289‑1 (MQ=255)
tGAAAGCAGGCCAGCGTTTAACGCTTAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCgcctcgc < 2:1030293/288‑5 (MQ=255)
tGAAAGCAGGCCAGCGTTGAACGCTTAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCgcctcgc < 2:725405/288‑5 (MQ=255)
ggAAGGCAGGCCGGGGTTTAACGCTTAAACGCCCGAAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCgcctcgc < 2:463225/287‑5 (MQ=255)
aGCAGGCCAGCGTTTAACGCTTAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGAt < 1:1824149/289‑1 (MQ=255)
aGCAGGCCAGCGTTTAACGCTTAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGAt < 1:387252/289‑1 (MQ=255)
cAGGCCAGCGTTTAACGCTTAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATTGCgcctcgccggatg > 1:145588/1‑278 (MQ=255)
gCCAGCGTTTAACGCTTAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGt < 2:33591/182‑1 (MQ=255)
cggacGTGTAACGCGTAAACGGCCGCAACAGGGGCTGCGCAGTTAACTGGCGGTCGCGGGTGGTATTGATGTTCCGGCGGTAATGGGCTCATGCAGGATCGATCTCAAAGGGGGGATTGGCGGGCTGGAAGGCCGTTGACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCa < 2:589320/282‑1 (MQ=255)
ccAGCGTTTAACGCTTAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATAGCATGAGTTCGAATGCGCCTCGCAGGATGCAt > 2:1187429/1‑287 (MQ=255)
ttAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGGATATCCTGGGTTCGATCGCGCCTCGCAGGGTGCATTCTTGCGttctccctt > 2:539930/1‑281 (MQ=255)
ttAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGttcgccctg > 1:212976/1‑281 (MQ=255)
ttAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGttcgccctg < 1:427746/289‑9 (MQ=255)
aCGGGATGCGCAGTTGTCTGGCGGTCACGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCTCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTagctcgca < 1:233392/289‑6 (MQ=255)
aCGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTagctcg < 1:1702404/287‑4 (MQ=255)
aCGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTagctcg < 1:1527420/287‑4 (MQ=255)
tGCGCAGTTATCTGGCGGTCGCGGGTGGTATGGATGTTCCGCCGGTAATGGGCTTATGCAGCACCAATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTaa < 1:710682/289‑1 (MQ=255)
gcAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTagctcg > 1:133398/1‑275 (MQ=255)
gcAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAACATCCTGAGTTCGAACGCGCCTCGCAGGATGCATTCTGGCGTTCGGCCGGGCCGCTTAGCTCGCAAAGAAAcc > 2:1337004/1‑288 (MQ=255)
gttagatGGGGGTCGCGGGGGGTATGGATGTTCGGGGGGTAAGGGGCTAGAGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGAATCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCa < 2:90707/282‑1 (MQ=255)
gTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCa < 2:941559/288‑1 (MQ=255)
tATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCa < 1:1187429/286‑1 (MQ=255)
tATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATgg > 1:1135413/1‑289 (MQ=255)
tCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTgg > 1:1038113/1‑259 (MQ=255)
gTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCTACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCt > 2:202877/1‑289 (MQ=255)
gTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCCTTCTGGCGTTCGCCCTGGCAGCTTAGCCCGCAAAGTAACCGCATGGGCT‑ATctct > 2:652061/1‑289 (MQ=255)
gTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCt > 1:1094593/1‑289 (MQ=255)
cgcgGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTa < 1:893409/289‑1 (MQ=255)
aTGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTCCAGGGGCAAAtttt > 2:1416382/1‑289 (MQ=255)
tGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTa < 1:776961/289‑1 (MQ=255)
tCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTaaaa < 1:984275/289‑1 (MQ=255)
ccgccgGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCCTGAGTTCGATCGCGCCTCGCAGGCGCCATTCTGCCGGTCGCCCTGCCGGCTTACCTCGCAACGTAACCGCCTGGGGT‑ATCGCTTACAGGGGGAAATTTTAAAAc > 2:24949/1‑289 (MQ=255)
ccgccgGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAAc > 1:1362063/1‑289 (MQ=255)
ccgccgGTAATGGGCTCATGCAGCACCGATCCCAAAGTGGGGATTGGCGGGCTGGTAGGCCGGTTACTGAAGGATGGTGACCGACGCCCGATTGCCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGTCTTGCCGGGGCCGGAATATCCTGAGTTCGATCGCGCCTCGCCGCATTCATTCTGGCACTCCCCCCGCCACCTTAGCTTGCACAGGAACCGAGTTGGCTAATCAC‑TACATTGGCAAATTTTatacc > 2:513473/1‑285 (MQ=255)
ccgGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGc > 1:1519728/1‑288 (MQ=255)
gTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGG‑GGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGcacca > 1:945784/1‑288 (MQ=255)
aaggggctattGCAGCACCTGTATCAAAGGGGGGATTGGCGGGCTGGAGGGTCGTTTACTGAAGGATGGTGACCGACGCCGGAGTGGCAA‑ATCTGAGCGTGATTCTATGGGAGCGCAGGGCGTTAAACAGGTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGGCGGATTATCATGAGTTCGATCGTGCCTCGCAGGATGCATTCTGGCGTTCGCCGTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGcaccac < 2:1660647/279‑1 (MQ=255)
aaTGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGcaccac < 1:1845703/288‑1 (MQ=255)
ctcatGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGCTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCACATTTTAAAACGCACCACCCAAcgc > 2:1749308/5‑289 (MQ=255)
tcatGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATcgcg < 1:1461591/286‑1 (MQ=255)
tcatGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATcgcg < 1:15657/286‑1 (MQ=255)
atGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATCGCGaa < 2:389964/288‑1 (MQ=255)
atGCAGCACCGATCTCAAAGTGGGGATTGGCAGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCt > 1:1414163/2‑245 (MQ=255)
caCCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATCGCGAACTGTTa > 1:460358/1‑289 (MQ=255)
aTCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCCAATTTTAAAACGACCCACCGATCGGGAACTGTTAtctcc > 2:634825/1‑288 (MQ=255)
aTCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTa < 1:1087236/257‑1 (MQ=255)
aTCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATCGCGAACTGTTAtctc > 1:1647946/1‑288 (MQ=255)
aTCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATCGCGAACTGTTATCTCa > 2:580250/1‑289 (MQ=255)
acgcAAAGTGGGGTGGTGGGGGCTGGAAGGCCGTTAACTGAAGGATGGTGACCGACTACCGATTGGCAA‑ATCGAAGGGTGATTCTATGGAAGCGAAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATCGCGAACTGTTATCTCa < 2:42219/285‑1 (MQ=255)
cgcAAGGTGGGGCTTGGCGGGCTGGAAGGCAGTTTACTGAAGGATGGTGACCGACTCCGGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATCGCGAACTGTTATCTCACg < 2:1315623/287‑1 (MQ=255)
aGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATCGCGAACTGTTATCTCACGGTTTg > 1:1727247/1‑289 (MQ=255)
gggATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGTGCT‑ATCGCTTACCGGGGCAAACTTTAAAACGCACCACCGATCGCGAACTGTTATCCTAAGGTTTGTTa > 2:1609541/1‑288 (MQ=255)
gggATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATCGCGAACTGTTATCTCACGGTTTGTTa > 1:9173/1‑288 (MQ=255)
gggATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGAAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGACCGCGAACTGTTATCTCACGGTTTGTTa > 2:85469/1‑288 (MQ=255)
gATTGGCGGGGTGGAAGGCCGTTTACTGAAGGGTGGTGGCCACCTCCCGATTGGCAA‑ATCGAGGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATCGCGAACTGTTATCTCACGGTTTGTTAcc < 2:145588/288‑1 (MQ=255)
ggCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATCGCGAACTGTTATCTCACGGTTTGTTACCGGGCg < 1:315341/289‑1 (MQ=255)
ggCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATCGCGAACTGTTATCTCACGGTTTGTTACCGGGCg < 1:634825/289‑1 (MQ=255)
gCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACGCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAGCGCACCACCGATCGCGAACTGTTATCTCACGGTTTGTTACCGGGCg < 2:1236058/288‑1 (MQ=255)
cGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATCGCGAACTGTTATCTCACGGTTTGTTACCGGGCgt < 1:782565/288‑1 (MQ=255)
tGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATCGCGAACTGTTATCTCACGGTTTGTTACCGGGCGTGGTGc < 1:7158/288‑1 (MQ=255)
gCCGTTTACGAACGGATGGTGACCGCTTCCCGATTGGCAA‑ATGGAAGCCTGATTATATGGAGGGGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATCGCGAACTGTTATCTCACGGTTTGTTACCGGGCGTGGTGCAGGTGc < 2:508611/288‑1 (MQ=255)
ccGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATCGCGAACTGTTATCTCACGGTTTGTTACCGGGCGTGGTGCAGGTGcc < 1:1010540/288‑1 (MQ=255)
cGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATCGCGAACTGTTATCTCACGGTTTGTTACCGGGCGTGGTGCAGGTGCcac > 1:138215/1‑289 (MQ=255)
gTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATCGCGAACTGTTATCTCACGGTTTGTTACCGGGCGTGGTGCAGGTGCcaca < 1:913145/289‑1 (MQ=255)
aCCGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATCGCGAACTGTTATCTCACGGTTTGTTACCGGGCGTGGTGCAGGTGCCACATAACGGGCAGCCGATtgt > 1:1810337/1‑289 (MQ=255)
ccGACTCCCGATTGGGAA‑ATCGAGGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATCGCGAACTGTTATCTCACGGTTTGTTACCGGGCGTGGTGCAGGTGCCACATAACGGGCAGCCGATtgtg < 2:683203/289‑1 (MQ=255)
ccGACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATCGCGAACTGTTATCTCACGGTTTGTTACCGGGCGTGGTGCAGGTGCCACATAACGGGCAGCCGATtgtg < 1:446127/289‑1 (MQ=255)
gACTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATCGCGAACTGTTATCTCACGGTTTGTTACCGGGCGTGGTGCAGGTGCCACATAACGGGCAGCCGATTGTGtt > 1:275122/1‑289 (MQ=255)
cTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATCGCGAACTGTTATCTCACGGTTTGTTACCGGGCGTGGTTCAGGGGCCACCTAACGGGACGCCGACTGTGTtga > 2:1289471/1‑289 (MQ=255)
cTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATCGCGAACTGTTATCTCACGGTTTGTTACCGGGCGTGGTGCAGGTGCCACATAACGGGCAGCCGATTGTGTtga > 1:558973/1‑289 (MQ=255)
cTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATCGCGAACTGTTATCTCACGGTTTGTTACCGGGCGTGGTGCAGGTGCCACATAACGGGCAGCCGATTGTGTtg < 1:349812/288‑1 (MQ=255)
cTCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATCGCGAACTGTTATCTCACGGTTTGTTACCGGGCGTGGTGCAGGTGCCACATAACGGGCAGCCGATTGTGTtg < 1:1258140/288‑1 (MQ=255)
tCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATCGCGAACTGTTATCTCACGGTTTGTTACCGGGCGTGGTGCAGGTGCCACATAACGGGCAGCCGATTGTGTtgat < 2:445429/289‑1 (MQ=255)
tCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATCGCGAACTGTTATCTCACGGTTTGTTACCGGGCGTGGTGCAGGTGCCACATAACGGGCAGCCGATTGTGTtgat < 1:1914444/289‑1 (MQ=255)
tCCCGATTGGCAA‑ATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATCGCGAACTGTTATCTCACGGTTTGTTACCGGGCGTGGTGCAGGTGCCACATAACGGGCAGCCGATTGTGTtgat < 1:488095/289‑1 (MQ=255)
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TGTTGAGTTCGAAACTGATGGGTGGTTTGCTCTGACGGGTGCCGGTTGCGAAGCGCGGCTGGATGATAATGCCGTCTGGACCGGCTGGCGATTGCCGATGAAAGCAGGCCAGCGTTTAACGCTTAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCAGTTGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAA‑AAGCAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCT‑GTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCAGCCAGGATGCATTCTGGCGTAGCCCCTGGCAGCTTAGCAGCCAAAGTAACCGCATGGGCT‑ATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATCGCGAACTGTTATCTCACGGTTTGTTACCGGGCGTGGTGCAGGTGCCACATAACGGGCAGCCGATTGTGTTGATGA > CP042583/607259‑607815
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
