Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F210 I1 R1
|
4930 |
262.8 |
3829204 |
96.6% |
3699011 |
272.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
619,059 |
3 bp→TCG |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 619,059 | 0 | A | T | 99.2%
| 594.0
/ NA
| 256 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (141/112); minor base G (0/2); total (142/114) |
| Fisher's exact test for biased strand distribution p-value = 1.99e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 619,060 | 0 | G | C | 98.8%
| 583.0
/ NA
| 256 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/3); new base C (141/111); total (142/114) |
| Fisher's exact test for biased strand distribution p-value = 8.80e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 619,061 | 0 | C | G | 98.4%
| 591.3
/ NA
| 256 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/4); new base G (142/110); total (142/114) |
| Fisher's exact test for biased strand distribution p-value = 3.82e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 256 total aligned reads displayed.
TGCCGGTGGCGCAGGTATGCGCGCGGCGCTGCAAATTTCCCAGAGCGGCCAGACCTGTGCGCTGCTCTCTAAAGTCTTCCCGACCCGTTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGAGCGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCAGCCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGAGCAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGGCGCGGTGGTGGGTTGTACCGCACTGTGCATCGAAACCGGTGAAGTGGTTTATTTCAAAGCCCGCGCTACCGTGCTG > CP042583/618782‑619340
|||
tGCCGGTGGCGCAGGTATGCGCGCGGCGCTGCAAATTTCCCAGAGCGGCCAGACCTGTGCGCTGCTCTCTAAAGTCTTCCCGACCCGTTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCGCgat > 1:156097/1‑289 (MQ=255)
gCCGGTGGCGCAGGTATGCGCGCGGCGCTGCAAATTTCCCAGAGCGGCCAGACCTGTGCGCTGCTCTCTAAAGTCTTCCCGACCCGTTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAGAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCgat < 1:1386771/288‑1 (MQ=255)
tGGCGCAGGTATGCGCGCGGCGCTGCAAATTTCCCAGAGCGGCCAGACCTGTGCGCTGCTCTCTAAAGTCTTCCCGACCCGTTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGGCTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATgg < 1:1878235/288‑1 (MQ=255)
ggCGCAGGTATGCGCGCGGCGCTGCAAATTTCCCAGAGCGGCCAGACCTGTGCGCTGCTCTCTAAAGTCTTCCCGACCCGTTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGt < 1:1815852/288‑1 (MQ=255)
gcgcAGGTATGCGCGCGGCGCTGCAAATTTCCCAGAGCGGCCAGACCTGTGCGCTGCTCTCTAAAGTCTTCCCGACCCGTTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTc < 1:1802900/288‑1 (MQ=255)
gcAGGTATGCGCGCGGCGCTGCAAATTTCCCAGAGCGGCCAGACCTGTGCGCTGCTCTCTAAAGTCTTCCCGACCCGTTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATGCTGGAACTCGAACACATGGGCGTGCCTGTCTTGCGTCGCGATGATGGTGGta > 2:868640/1‑289 (MQ=255)
gcgcgGCGCTGCAAATTTCCCAGAGCGGCCAGACCTGTGCGCTGCTCTCTAAAGTCTTCCCGACCCGTTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACg > 1:336838/1‑289 (MQ=255)
aaTTTCCCAGAGCGGCCAGACCTGTGCGCTGCTCTCTAAAGTCTTCCCGACCCGTTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGt < 2:840564/289‑1 (MQ=255)
tgCGCTGCTCTCTAAAGTCTTCCCGACCCGTTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGa > 2:1048115/1‑288 (MQ=255)
tgCGCTGCTCTCTAAAGTCTTCCCGACCCGTTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCATCCTCGCGTCTCGCTGATGGTCGGTTCTATACAACG‑CCGTTTTGCTGTCAGTCGTAAA‑ACTTtggcttggag > 2:1067472/1‑283 (MQ=255)
gcgcTGCTCTCTAAAGTCTTCCCGACCCGTTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAg > 2:720253/1‑288 (MQ=255)
ttccccgctAAAGTCTTCCCGATCCGTTCCCTTACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAg < 1:1262401/281‑1 (MQ=255)
tgctCTCTAAAGTCTTCCCGACCCGTTCCCATCCCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTACTCCCCAGGAAGATAACTGCGAATGTCATATGTACGCCACCGGGAAACGGTCGGACTCTATCGTTGGCAAGAACGAGATCGAATCTATGTGTAAACCCGGGCCGGAAGCCATGCTGGAACCCGAACACATGGGCCTGCCGTTCTCGCGTATCGAAGCTCGGCGCACCCAT‑CAAACCCTGCTTGTC‑GTGCGAGCAAAACCCTTCTGCGGCGAGCAggc > 2:191063/1‑289 (MQ=255)
ctACAGTCTTCCCGACCCTGTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTGGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGAATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGgcacg < 2:1655373/289‑1 (MQ=255)
aatCTTCACGACCCGTACCCGTACCGTTTCGGGGCAAGGCGGCATTACGGTTGGGCGGGGTAATACCCATGAAGAGAGCTGGGAAGGGAATAGGTAAGACACCGTGAAAGGATCGGACAATATCGGGGACCAGGACGCGATTGAAAAAAGGTGGAAAACCGGGCCGGAAGCGATTCTGGGACTCGAACACATGGGCCGGGCGTTCTCGCGTCTCGATGATGGTCGTATCGAT‑CAACGTCCGTTTGGCGGTCAGGCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACt < 2:495922/287‑1 (MQ=255)
tCTTCCCGACCCGTTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGc > 2:614866/1‑289 (MQ=255)
tccccGACCCGTTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATTAAGATAACTATTCCTGGCATATGTACGACACCGTGACCATTTCGGACTATATCGGTTCCCACTACGCGATTCAATATATGTGTAAAACCGGGCCGGAAGCGATTCTCGAACTCGAACACATGGGCCTTCCGTTCTCGCGTCTCGCTGATGGTCGTATCTAT‑CAACGTCCGTTTTGCGTTCAGTCGAAAA‑CCTTCCTCTCCCCTCAGGCGGCACGCACTGCgg < 1:104087/287‑1 (MQ=255)
tcccgccacttgcccATACCGTTTCTGCGGAAGGCGGCATTACCGTGGGGCGGGGTAATACCCATGAAGATAACTGGGAATGGCAAATGACCGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGgc < 2:1288276/277‑1 (MQ=255)
tCCCGACCCGTTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGgc > 2:160948/1‑289 (MQ=255)
tCCCGACCCGTTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGgc > 1:238825/1‑289 (MQ=255)
gTTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTc < 1:767666/237‑1 (MQ=255)
tttCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGGCCGTACCgggcc > 2:1138373/1‑286 (MQ=255)
tttCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCgg < 1:300658/286‑1 (MQ=255)
tttCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTc > 1:433142/1‑288 (MQ=255)
tttCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTc > 1:1778221/1‑288 (MQ=255)
tCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACg < 2:526913/289‑1 (MQ=255)
ctgcggcAAGGGCGGATTACCGTTGCGCTGGGTAATACCCATGAATCTAACTGGGAAGGGTATATGTACGAGACCGGGAAAGGGTCGGACTATATGGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACg < 2:1220543/284‑1 (MQ=255)
ggcggcATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCATAAGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGCATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGTCGTTCTCGCGTCTCGATTATGGTCGTATCTAT‑CAACGTCCGTTTGGCGCTCAGTCGAAAA‑ACTTAGGCGGCGATCAGGCGACATGCACTGCGGGCGTCACGGACCGTACCGGTCCCGCAcagcgc > 2:1569889/1‑283 (MQ=255)
tggaattcgcGTTGCGCTGGGTAATACGCATGAATATAAATGGGAGTAGCATATGAACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAACCCGGTCCGGAAGCGTTTCTGGAACTCGACCACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGca < 2:919863/279‑1 (MQ=255)
cgcTGGGTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCCGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCAATGCGGCAGCAGCTGACCGTACCGGCCACGCACTGTTGCACACGCTCTCTcagca > 2:343784/1‑289 (MQ=255)
cTGGGTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGa > 1:1128775/1‑289 (MQ=255)
gggTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAATCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCTTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGCCGGCGAGCAGGCGGCACGCCTCGCGGCATCAGCTGACCTTACTGACCACGCACTCTCGTACACGCTTTACcagcctag > 2:1508383/1‑284 (MQ=255)
aTGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGGACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAacca < 2:226749/289‑1 (MQ=255)
aTGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑CCTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTGTATCAGCAAAACCGTAAAAacca > 2:1383021/1‑289 (MQ=255)
aTGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGcaca < 1:1693632/261‑1 (MQ=255)
aTGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAacc > 1:1432643/1‑288 (MQ=255)
aTGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAacc > 1:363729/1‑288 (MQ=255)
aTGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCCGCACGCACTGCGGCCGCAGCTGAACGTACCGGCCACGCACGGTTGCACACGCGTTACCAGCAGAACCGGAAAAacc > 2:743646/1‑288 (MQ=255)
cATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCCGCAGCTGACCGTACCGGTCACGCACTGTTTCACACGCTTTCTCAGCAGAACCTTAAAAACCCCACTCACCttttacccagat > 2:1465905/1‑281 (MQ=255)
cATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAg < 2:1167568/288‑1 (MQ=255)
tGTACGACGCCGTGAAGGGGTCGGCCTAAATGGGGTACCAGGAGGGGATTGAATAGATGTGTAAAACCGGGGCGGAAGCGATTCTGGAACTCGAAAACATGGGCCTGCCGTTCTCGCGTCTAGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTa < 2:41328/289‑1 (MQ=255)
cGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGACAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCATCAGCTGACTGTACGGGTGACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAAACACAC‑CACCATTTTcccctggcggtcagg > 2:1452876/1‑277 (MQ=255)
gACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATtcg > 2:782999/1‑288 (MQ=255)
gACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGGGGTAttc > 1:1811890/1‑285 (MQ=255)
acacCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGGACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CCCCATTTTCCCCGAGTGGTATgg > 2:171197/1‑285 (MQ=255)
cGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGaa > 1:1517389/1‑243 (MQ=255)
cGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGt > 1:671459/1‑278 (MQ=255)
cGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATgc < 1:663999/282‑1 (MQ=255)
cGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGa > 1:1661501/1‑288 (MQ=255)
cGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGa > 1:106127/1‑288 (MQ=255)
cGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGa > 1:1196125/1‑288 (MQ=255)
tGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGCTGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCCGCAGCTGACCGTACCGGTCACGCACTGGTGCACACGCTTTATCAGCAGAACCTGAAAAACCACCC‑CACCATTTTCTCCGACTGTTATTCGCCGGTTcc > 2:1734160/1‑288 (MQ=255)
tGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGCAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCCTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTCCTCCCACTGGTATgcccctga > 2:1113272/1‑280 (MQ=255)
tGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAACAACCACAC‑CACCATTTCCTCCGACTGTAATGCCCTGGa > 2:33085/1‑286 (MQ=255)
gACTATATGAGTGACGAGGCCGCGGTTGTATAGATGTGTAAAACAGGTCAGGACGCGATTCTGGAAGTCGAACCGATGGGCCGTCCGTGTTGGCGTCTCGATGATGGTCGTAGCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAC‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAAc < 2:1344722/288‑1 (MQ=255)
aCTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCa > 1:939198/1‑289 (MQ=255)
tatCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGAt > 2:580225/1‑289 (MQ=255)
atCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCCGCGATCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTGCCGGTCACGCACTGTTGCACCCGCTTTATCAGCGGTACCTGAAACACCACAA‑CACCATTTTCTCCGACTGGTTTGCGGTGGATCTGGTGAAAAACCAAGATg > 2:1492872/1‑289 (MQ=255)
ggTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGgcg < 1:200847/289‑1 (MQ=255)
gTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGgcgc > 1:250225/1‑289 (MQ=255)
tGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGGcgcg > 1:420933/1‑289 (MQ=255)
aCCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTAc > 2:734967/1‑181 (MQ=255)
aCCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTg < 2:1271719/194‑1 (MQ=255)
ccAGGACGGGAGTGAAGATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACGCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGGCGCggtg < 2:968823/289‑1 (MQ=255)
ccAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGGCGCggtg < 1:1688520/289‑1 (MQ=255)
cAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATgg < 2:1028880/92‑1 (MQ=255)
cAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATgg > 1:1028880/1‑92 (MQ=255)
cAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGGCGCggtgg > 1:804129/1‑289 (MQ=255)
cAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGGCGCggtgg > 1:1370945/1‑289 (MQ=255)
cAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTAGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGGCGCggtgg < 1:970040/289‑1 (MQ=255)
ggACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACAGTACCGGTCACGCACTGTTGCACACGCTCTATCAGCAGAACCTTAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTCGATCTGGTGAAAAACCCTGATggtcgggtgggg > 2:820726/1‑279 (MQ=255)
cgcgATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGGCGCGGTGGTggg < 1:1141155/288‑1 (MQ=255)
cgcgATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGGCGCGGTGGTggg < 1:782999/288‑1 (MQ=255)
cgcgATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGGCGCGGTGGTggg < 2:363729/288‑1 (MQ=255)
cgcgATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGGCGCGGTGGTGGGt > 1:263605/1‑289 (MQ=255)
cgcgATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGGCGCGGTGGTGGGt > 2:277783/1‑289 (MQ=255)
ttGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCCCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGGCGCGGTGGTGGGTTGTa > 1:51007/1‑288 (MQ=255)
tgatatGTGGAGGACCGGGCGGGAACCGATTCTTGAACTCGGACACATGGGCCTGCCGTTCTCGCGTATCGTTGATGGTGCTGTCTAT‑CAACGGCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCTGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAGCCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGGCGCGGTGGTGGGTTGTACCGCa < 2:750228/287‑1 (MQ=255)
atatatGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGGCGCGGTGGTGGGTTGTACCGCa < 2:241082/289‑1 (MQ=255)
atatatGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGGCGCGGTGGTGGGTTGTACCGCa < 1:1492711/289‑1 (MQ=255)
atatatGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGGCGCGGTGGTGGGTTGTACCGCa < 1:720253/289‑1 (MQ=255)
agaataggggagacccGGGCGGGAAGAGATTCCCGAACGCGTACACATGGGACGGCCCTGCTCCCGTATCGATACTGGTCGTAACTAA‑CAACGTCCCATTGGCGGTCAGTCGAAAA‑ACTTCGGCTGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGATTTATCAGCAGAACCTGAAAAACCACAC‑CAGCATGTTCTCCGAGTGGTATACGCTGGATCTGGTGAAAAACCAGGATGGCGCGGTGGTGGGTAGTACCGCa < 2:444647/275‑1 (MQ=255)
tatGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGATCGCATGGTCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGTTATGCGCTGGATCTGGTGAAAAACCAGGATGGCGCGGTGGTGGGTTGTACCGCACtg < 1:1303288/289‑1 (MQ=255)
gtgtAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGGCGCGGTGGTGGGTTGTACCGCACTGTGc > 1:857748/1‑289 (MQ=255)
gtgtAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGGCGCGGTGGTGGGTTGTACCGCACTGTGc > 1:1910897/1‑289 (MQ=255)
tAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACCCGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGGCGCGGTGGTGGGTTGTACCGCACTGTGCATc > 2:674537/1‑289 (MQ=255)
tAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGa < 2:1835857/191‑1 (MQ=255)
ccGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGgcg < 1:107863/255‑1 (MQ=255)
ggCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGTGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCGGGTGAAAAACCAGGATGGCGGGGTGGGTGGGTGTACCGCACTGGGCATCGAAACCgg > 2:759456/1‑289 (MQ=255)
cGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGGCGCGGTGGTGGGTTGTACCGCACTGTGCATCGAAACCGGTGa < 1:598641/289‑1 (MQ=255)
ggAAGCGATTCTGGAACTCGAACACATGGTCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGGCGCGGTGGTGGGTTGTACCGCACTGTGCATCGAAACCGGTGaa < 1:868144/289‑1 (MQ=255)
gAAGCGCTTCTGTACCTCAAAACCATGGGCCTGCCGTTCTCCGGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGGCGCGGTGGTGGGTTGTACCGCACTGTGCATCGAAACCGGTGaa < 2:939198/288‑1 (MQ=255)
aaGGGATTCTGGGACTCGAGCACATGGGCCGTCCTTTCGCGCGTCGCGATGATGTGCGGATCGAT‑CAACTTTCGTTTGGCGGTCAGTCGGAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTGTATCAGCAGAACCTGAAAAACCACGC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAATACCAGGATGGCGCGGTGGTGGGTTGTACCGCACTGTGCATCGAAACCGGTGAAg < 2:1127202/288‑1 (MQ=255)
tCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGGCGCGGTGGTGGGTTGTACCGCACTGTGCATCGAAACCGGTGAAGTGGTTTATTTCAAAGc < 1:736538/289‑1 (MQ=255)
cGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGGCGCGGTGGTGGGTTGTACCGCACTGTGCATCGAAACCGGTGAAGTGGTTTATTTCAAAGc > 1:1640624/1‑288 (MQ=255)
aaaccaTGGGCCTGCCGTTCTGGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGGCGCGGTGGTGGGTTGTACCGCACTGTGCATCGAAACCGGTGAAGTGGTTTATTTCAAAGCCcg < 1:1607761/285‑1 (MQ=255)
acacATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGGCGCGGTGGTGGGTTGTACCGCACTGTGCATCGAAACCGGTGAAGTGGTTTATTTCAAAGCCcg < 1:343784/288‑1 (MQ=255)
acacATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGGCGCGGTGGTGGGTTGTACCGCACTGTGCATCGAAACCGGTGAAGTGGTTTATTTCAAAGCCcg < 1:573533/288‑1 (MQ=255)
aTGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGGCGCGGTGGTGGGTTGTACCGCACTGTGCATCGAAACCGGTGAAGTGGTTTATTTCAAAGCCCGCGCTa < 1:614866/289‑1 (MQ=255)
gggCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGTCGAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGGCGCGGTGGTGGGTTGTACCGCACTGTGCATCGAAACCGGTGAAGTGGTTTATTTCAAAGCCCGCGCTAcc > 2:667240/1‑289 (MQ=255)
|||
TGCCGGTGGCGCAGGTATGCGCGCGGCGCTGCAAATTTCCCAGAGCGGCCAGACCTGTGCGCTGCTCTCTAAAGTCTTCCCGACCCGTTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGAGCGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCAGCCGTCTCGATGATGGTCGTATCTAT‑CAACGTCCGTTTGGCGGTCAGAGCAAAA‑ACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACAC‑CACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGGCGCGGTGGTGGGTTGTACCGCACTGTGCATCGAAACCGGTGAAGTGGTTTATTTCAAAGCCCGCGCTACCGTGCTG > CP042583/618782‑619340
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
