Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 647,445 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583647,4450AT97.9% 555.1 / NA 241intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (1/0);  major base T (99/136);  minor base G (4/1);  total (104/137)
Fisher's exact test for biased strand distribution p-value = 1.68e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583647,4460CG99.6% 565.1 / NA 241intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (103/137);  minor base T (1/0);  total (104/137)
Fisher's exact test for biased strand distribution p-value = 4.32e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP042583647,4470TA100.0% 576.8 / NA 241intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (104/137);  total (104/137)

Only 100 of 241 total aligned reads displayed.

AGGTCCCCGAGCACATGCAGTGCCGCTGCTCGTACGTTGAGGTTTTTCTCTTCGCTGCCGTGATGAAGTAACCAGAAAGAAAGTATATTTGCCAGCAACCCAGCCACGGCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGACTAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGACTGGACGTGTGACTGTGACTGTGCGCCATGACGAGTCATCCCTTAATTATTCTCACTTAACTTTATGACATCATACTGCTTTTAGAAGTGAAA  >  CP042583/647167‑647721
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                  
agGTCCCCGAGCACATGCAGTTCCGCTGCTCGTACGTTGAGGTTTTTCTCTTCGCTGCCGTGATGAAGTAACCAGAAAGAAAGTATATTTGCCAGCAACCCAGCCACGGCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGc                                                                                                                                                                                                                                                                             <  2:1291963/288‑1 (MQ=255)
    ccccGAGCACATGCAGTGCCGCTGCTCGTACGTTGAGGTTTTTCTCTTCGCTGCCGTGATGAAGTAACCAGAAAGAAAGTATATTTGCCAGCAACCCAGCCACGGCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGc                                                                                                                                                                                                                                                                        >  1:1309650/1‑289 (MQ=255)
          gCACATGCAGTGCCGCTGCTCGTACGTTGAGGTTTTTCTCTTCGCTGCCGTGATGAAGTAACCAGAAAGAAAGTATATTTGCCAGCAACCCAGCCACGGCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTa                                                                                                                                                                                                                                                                   <  1:306045/288‑1 (MQ=255)
                    tGCCGCTGCTCGTACGTTGAGGTTTTTCTCTTCGCTGCCGTGATGAAGTAACCAGAAAGAAAGTATATTTGCCAGCAACCCAGCCACGGCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGCCGGGAAAATTGCACGGCGAGTAGGGCGAAAAga                                                                                                                                                                                                                                                        >  2:830485/1‑288 (MQ=255)
                      ccGCTGCTTGTACGTTGAGGTTTTTCTCTTCGCTGCCGTGATGAAGTAACCACAAAGAAAGTATATTTGCCAGCAACCCAGCCACGGCAATTGCCATCATCATGCCGCCCTCGACCGAACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGTGAGCGT‑GGGCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAg                                                                                                                                                                                                                                                      <  2:225667/289‑1 (MQ=255)
                       cGCTGCTCGTACGTTGAGGTTTTTCTCTTCGCTGCCGTGATGAAGTAACCAGAAAGAAAGTATATTTGCCAGCAACCCAGCCACGGCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAgg                                                                                                                                                                                                                                                     >  2:121366/1‑289 (MQ=255)
                           gctCGTACGTTGAGGTTTTTCTCTTCGCTGCCGTGATGAAGTAACCAGAAAGAAAGTATATTTGCCAGCAACCCAGCCACGGCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGggcgg                                                                                                                                                                                                                                                 <  1:1883918/289‑1 (MQ=255)
                                 aCGTTGAGGTTTTTCTCTTCGCTGCCGTGATGAAGTAACCAGAAAGAAAGTATATTTGCCAGCAACCCAGCCACGGCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTa                                                                                                                                                                                                                                            <  1:511967/288‑1 (MQ=255)
                                   gTTGAGGTTTTTCTCTTCGCTGCCGTGATGAAGTAACCAGAAAGAAAGTATATTTGCCAGCAACCCAGCCACGGCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCg                                                                                                                                                                                                                                         <  1:1565520/289‑1 (MQ=255)
                                      gatgTTTTTCCCCTAGCTGCCGTGATGAAGTAACCAGAAAGAAAGTATAGTTGCCAGCACCACAGCCAACGCAATTGCCACCACTATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGGTCTATCGCCTCCCAGACAATCAAAATTGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTc                                                                                                                                                                                                                                      <  2:1354999/286‑1 (MQ=255)
                                      gAGTTTTGTCTCTTCGCCGCAGGGATGGAGTAACCAGAAAGAAAGTATATTTGCAAGCAACCCAGCCACGGCAATGGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑TGTCAGTCTGAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTc                                                                                                                                                                                                                                      <  2:1162783/289‑1 (MQ=255)
                                      gAGGTTTTTCTCTTCGCTGCCGTGATGAAGTAACCAGAAAGAAAGTATATTTGCCAGCAACCCAGCCACGGCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTc                                                                                                                                                                                                                                      <  2:1245334/289‑1 (MQ=255)
                                      gAGGTTTTTCTCTTCGCTGCCGTGATGAAGTAACCAGAAAGAAAGTATATGTGCCAGCAACCCAGCCACGGCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAACGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAACGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTc                                                                                                                                                                                                                                      <  1:1144477/289‑1 (MQ=255)
                                       aGGTTTTTCTCTTCGCTGCCGTGATGAAGTAACCAGAAAGAAAGTATATTTGCCAGCAACCCAGCCACGGCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTATTAGCCCACCGAAAGTGTCGCGAATGGTGGGAGGCCGACGTGAAAATTGCACGGCGAGTAGGTAGAAAAGAAGGGCGGCAGGAACGGGCa                                                                                                                                                                                                                                     >  2:1416715/1‑289 (MQ=255)
                                                   tCGCTGCCGTGATGAAGTAACCAGAAAGAAAGTATATTTGCCAGCAACCCAGCCACGGCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACTTGAAAATTGCACGGCGGGTAGGGCGAAAAGCAGGGAGGCAGTAACGGTCAACATATgcacc                                                                                                                                                                                                                          >  2:394099/1‑284 (MQ=255)
                                                     gCTGACGAGATGAAGTAACCAGCACGAAACTATATTCTCCCGCAACCCATCCACTGCAATTGCCATCATCCTGCCGCCCTCGACCAGACGCGGCGTGCGGATGCGTTCTATCGCCTGCCAAACAATCAAAATTGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGCAAGTGTGGCGAATGGTGGGAGGACTACGTGAAAATTGCACGGCGAGTAGGGCCAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCa                                                                                                                                                                                                                       <  2:1813019/289‑1 (MQ=255)
                                                         ccGTGATGAAGTAACCAGAAAGAAAGTATATTTGCCAGCAACCCAGCCACGGCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCgg                                                                                                                                                                                                                   <  1:830485/289‑1 (MQ=255)
                                                             gatgaAGTAACCAGAAAGAAAGTATATTTGCCAGCAACCCAGCCACGGCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAg                                                                                                                                                                                                               <  2:6864/289‑1 (MQ=255)
                                                              atgaAGTAACCAGAAAGAAAGTATATTTGCCAGCAACCCAGCCACGGCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGc                                                                                                                                                                                                              >  2:160785/1‑289 (MQ=255)
                                                              atgaAGTAACCAAAAACGACGTCTATTGGCCAGCAACCCCGCCCCGGCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGc                                                                                                                                                                                                              <  2:1783126/289‑1 (MQ=255)
                                                                gaAGTAACCAGAAAGAAAGTATATTTGCCAGCAACCCAGCCACGGCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCaa                                                                                                                                                                                                            <  2:1482727/289‑1 (MQ=255)
                                                                 aaGTAACCAGAAAGAAAGTATATTTGCCAGCAACCCAGCCACGGCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGGCAACATAGGACACGGATCGGCCAGCAAt                                                                                                                                                                                                           >  2:1197952/1‑289 (MQ=255)
                                                                   gTAACCAGAAAGAAAGTATATTTGCCAGCAACCCAGCCACGGCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATg                                                                                                                                                                                                          >  1:1436504/1‑288 (MQ=255)
                                                                     aaCCAGAAAGAAAGTATATTTGCCAGCAACCCAGCCACGGCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCa                                                                                                                                                                                                       <  2:1141769/289‑1 (MQ=255)
                                                                                aagTCTATTGGCCAGCAACCCAGCCACGGCAATTGCCAGCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACAAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCagaa                                                                                                                                                                                            <  2:205718/289‑1 (MQ=255)
                                                                                  gTATATTTGCCAGCAACCCAGCCACGGCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCagaaag                                                                                                                                                                                          >  2:477327/1‑289 (MQ=255)
                                                                                  gTATATTTGCCAGCAACCCAGCCACGGCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTACCGGGCAACATATGACCCGCATCGGCCAGCAATGCCAGGAAACCagaaag                                                                                                                                                                                          >  2:274585/1‑289 (MQ=255)
                                                                                         tGCCAGCAACCCAGCCACGGCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAacca                                                                                                                                                                                   >  1:302053/1‑289 (MQ=255)
                                                                                             aGCAACCCAGCCACGGCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCaga                                                                                                                                                                                             <  2:431163/275‑1 (MQ=255)
                                                                                                aaCCCAGCCACGGCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCaa                                                                                                                                                                               <  1:1248013/286‑1 (MQ=255)
                                                                                                  cccAGCCACGGCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACt                                                                                                                                                                          <  1:372691/289‑1 (MQ=255)
                                                                                                      gCCACGTCAATTGCCATCATCATGCCGCGCTCGACCGGACGCGGCGTGCGGAAGCGTTCGCTCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTa                                                                                                                                                                      <  1:1020154/289‑1 (MQ=255)
                                                                                                       ccgcgacAATGGCCATCATCATGCCGCCCTCGACCGGACGCGGCGGGCGGAATCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTAc                                                                                                                                                                     <  2:973028/283‑1 (MQ=255)
                                                                                                       caaCGGCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTAc                                                                                                                                                                     <  1:43462/287‑1 (MQ=255)
                                                                                                        cACGGCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTAc                                                                                                                                                                     <  1:1547231/288‑1 (MQ=255)
                                                                                                           ggCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGc                                                                                                                                                                 >  1:851503/1‑289 (MQ=255)
                                                                                                            gCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCa                                                                                                                                                                >  1:1088487/1‑289 (MQ=255)
                                                                                                                                 cccTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGa                                                                                                                                           <  2:1530116/289‑1 (MQ=255)
                                                                                                                                   cTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGaaa                                                                                                                                         >  1:1124916/1‑289 (MQ=255)
                                                                                                                                           gACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGCG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGACAGCGTGGCGTATGGTGGGAGGACGACGTGAAAATTTCACGGCGCGTAGGGCGTAAAGCAGGTCGGCAGTATCCGCCAACATATGATCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCAACAACGACCTCTACCAGCATAAACCCGGCACGCACGCCGAAAGCACacaa                                                                                                                                 >  2:1057988/1‑289 (MQ=255)
                                                                                                                                           gACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATACACCCGGCAGTCACGCCGAAAGCACacaa                                                                                                                                 >  2:556383/1‑289 (MQ=255)
                                                                                                                                             cgcgGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATacaaca                                                                                                                               <  1:760560/289‑1 (MQ=255)
                                                                                                                                                   gttcGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGcgac                                                                                                                         <  1:1912106/286‑1 (MQ=255)
                                                                                                                                                   gTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGcgac                                                                                                                         <  1:1287052/289‑1 (MQ=255)
                                                                                                                                                       ggAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAg                                                                                                                      <  1:1523386/288‑1 (MQ=255)
                                                                                                                                                       ggAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAg                                                                                                                      <  1:1405187/288‑1 (MQ=255)
                                                                                                                                                       cgagacGTTATAGCGCATCCCAGACAATCAAAATGGTAAGTACCACGAG‑GGCTAAGGCATTCGCAAGCGCCGCGAGCGA‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGGGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCATGGACGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGGGAACCAGAAAGAAAACCACCAACGACTTCTACCTGCATAAAACCGGCAGTCACGCCGAAAGCATACAACTTGCGACGAg                                                                                                                      <  2:656053/283‑1 (MQ=255)
                                                                                                                                                         aaGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCa                                                                                                                    <  1:160785/288‑1 (MQ=255)
                                                                                                                                                                       cgccgaGACAATAAAAATGGTAATCACCACGAG‑GGCTAAGGCATTCACAAACGCCGCGGGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAAGTGCACGGCGAGTGGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGc                                                                                                     <  2:1566311/284‑1 (MQ=255)
                                                                                                                                                                       cTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGc                                                                                                     <  1:78619/289‑1 (MQ=255)
                                                                                                                                                                       cTCCCAAAAAATCAAAAAGGTACTTACCACGGG‑GGCTATGGCATTCACAACCGCCGCGAGCGG‑GGTCAGTATTAGCCAACCGAAGGTGTGGCGAATGGTGGGAGGACGAAGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGc                                                                                                     <  2:1674491/289‑1 (MQ=255)
                                                                                                                                                                       cTCACAGACAATCAAAATGGTAATGA‑CACCAGAGGCTATGGCAGTCGCAAACGCAGGGAGCGT‑GGTCAGGCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACCACGTGAAAATTGCACGGCGAGTAGGGCGAAAAACAGGGCGGAAGTATCAGTCAACATATGACCCGCAGCGGCCAGCAATGCCAGCGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGc                                                                                                     <  1:451423/289‑1 (MQ=255)
                                                                                                                                                                             gACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGa                                                                                                                                           <  1:998690/245‑1 (MQ=255)
                                                                                                                                                                               cAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTgt                                                                                               <  1:1762788/287‑2 (MQ=255)
                                                                                                                                                                                 accAAAACGGTAATTACCGCGCG‑GGCTATGGGATT‑ACCAACCTCCAGGGCGTGGGTACGTCTTAGCCAACCGGAAGTGTGGCGAATGGTGGTGGGACGACGTGAAAATTGCACGGAGAGTAGGGCGAACAGGAGGGCGGCAGTATCGGTCAACATATGCCCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTgtgagg                                                                                           <  2:1550658/287‑6 (MQ=255)
                                                                                                                                                                                 aTCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCAAGCAATGCCAGAGAACCAGAAAGAAAACCACAAACGACTTCTACCAGCATAAACCCGGCAGTGACGCAGAAAGCATACCACAAGCGACGAGCATTATAACCTTCTGGCTGGTgtgagg                                                                                           >  2:643185/1‑284 (MQ=255)
                                                                                                                                                                                  tCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTgtgagg                                                                                           >  1:1724544/1‑283 (MQ=255)
                                                                                                                                                                                   cAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTgtgaggac                                                                                         <  2:1088568/289‑8 (MQ=255)
                                                                                                                                                                                   cAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCCGGCAGGTgggcggac                                                                                         >  2:1315846/1‑282 (MQ=255)
                                                                                                                                                                                       aTGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCGGAGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACgtgt                                                                                     <  1:216426/289‑1 (MQ=255)
                                                                                                                                                                                            aaTTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTTTGGCAGGTGTGAGGACGggtgtgga                                                                                >  2:1887741/1‑285 (MQ=255)
                                                                                                                                                                                                aCCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGtgtgtgagtgtg                                                                            >  1:64773/1‑281 (MQ=255)
                                                                                                                                                                                                    cGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGCGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGGCGAAAGCATACAACAAGCGACGAGCATTATGATCTTCTTGCAGGTGTGAGGACGtgtgtgcgtgtgagtg                                                                        >  2:946073/1‑277 (MQ=255)
                                                                                                                                                                                                       g‑ggCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGtgtgtgagtgtgagtgcg                                                                      <  1:1769216/288‑15 (MQ=255)
                                                                                                                                                                                                             aTGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTGTGTGAGTGTGAGTGCGCCATg                                                                 >  1:506656/1‑288 (MQ=255)
                                                                                                                                                                                                             aTGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGAAGTGTGTGAGTGTGAGTGCGCCATGa                                                                >  1:1705427/1‑289 (MQ=255)
                                                                                                                                                                                                              tGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTGTGTGAGTGTGAGTGCGCCATGAc                                                               >  1:986144/1‑289 (MQ=255)
                                                                                                                                                                                                                  aTTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTGTGTGAGTGTGAGTGCGCCATGACGAg                                                            <  1:584936/288‑1 (MQ=255)
                                                                                                                                                                                                                   ttCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTGTGTGAGTGTGAGTGCGCCATGACGAGTc                                                          >  1:182920/1‑289 (MQ=255)
                                                                                                                                                                                                                   ttCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAA‑CAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGcgac                                                                                                                         >  2:108407/1‑225 (MQ=255)
                                                                                                                                                                                                                    tCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAg                                                                                                                                                                                                               <  1:960804/139‑1 (MQ=255)
                                                                                                                                                                                                                       caAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTGTGTGAGTGTGAGTGCGCCATGACGAGTCATcc                                                      <  2:182920/289‑1 (MQ=255)
                                                                                                                                                                                                                        aaaCGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTGTGTGAGTGTGAGTGCGCCATGACGAGTCATc                                                       >  1:1320115/1‑287 (MQ=255)
                                                                                                                                                                                                                              cgcgAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTGTGTGAGTGTGAGTGCGCCATGACGAGTCATCCCTTAatt                                               >  1:1555978/1‑289 (MQ=255)
                                                                                                                                                                                                                                  aGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTGTGTGAGTGTGAGTGCGCCATGACGAGTCATCCCTTAattatt                                            <  1:1900274/288‑1 (MQ=255)
                                                                                                                                                                                                                                                ttAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTGTGTGAGTGTGAGTGCGCCATGACGAGTCATCCCTTAATTATTCTCACTTAACTTTa                              <  1:1040535/289‑1 (MQ=255)
                                                                                                                                                                                                                                                ttAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTGTGTGAGTGTGAGTGCGCCATGACGAGTCATCCCTTAATTATTCTCACTTAACTTTa                              <  1:1400965/289‑1 (MQ=255)
                                                                                                                                                                                                                                                  aGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCAt                                                                                                                                     <  1:345936/184‑1 (MQ=255)
                                                                                                                                                                                                                                                  aGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCAt                                                                                                                                     >  2:345936/1‑184 (MQ=255)
                                                                                                                                                                                                                                                  aGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTGTGTGAGTGTGAGTGCGCCATGACGAGTCATCCCTTAATTATTCTCACTTAACTTTATg                            <  1:557741/289‑1 (MQ=255)
                                                                                                                                                                                                                                                   gCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTGTGTGAGTGTGAGTGCGCCATGACGAGTCATCCCTTAATTATTCTCACtt                                     >  1:1107329/1‑279 (MQ=255)
                                                                                                                                                                                                                                                   gCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTGTGTGAGTGTGAGTGCGCCATGACGAGTCATCCCTTAATTATTCTCACTTAACTTTATg                            >  1:55415/1‑288 (MQ=255)
                                                                                                                                                                                                                                                        ccGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAg                                                                                                                                                                                                                                                      >  2:567805/1‑65 (MQ=255)
                                                                                                                                                                                                                                                        ccGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGcc                                                                                                                                                                                                                 <  2:1740098/102‑1 (MQ=255)
                                                                                                                                                                                                                                                        ccGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGcc                                                                                                                                                                                                                 >  1:1740098/1‑102 (MQ=255)
                                                                                                                                                                                                                                                        ccGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTgtgaggac                                                                                         <  2:1513780/222‑8 (MQ=255)
                                                                                                                                                                                                                                                        ccGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTgtgagg                                                                                           <  2:25292/220‑6 (MQ=255)
                                                                                                                                                                                                                                                        ccGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTgtgagg                                                                                           >  1:25292/1‑215 (MQ=255)
                                                                                                                                                                                                                                                        ccGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTGTGTGAGTGTGAGTGCGCCATGACGAGTCATCCCTTAATTATTCTCACTTACCTTTATGAcatca                      >  1:887607/1‑289 (MQ=255)
                                                                                                                                                                                                                                                        ccGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTGTGTGAGTGTGAGTGCGCCATGACGAGTCATCCCTTAATTATTCTCACTTAACTTTATGAcatca                      >  1:258624/1‑289 (MQ=255)
                                                                                                                                                                                                                                                        ccGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTGTGTGAGTGTGAGTGCGCCATGACGAGTCATCCCTTAATTATTCTCACTTAACTTTATGAcatca                      >  1:1155861/1‑289 (MQ=255)
                                                                                                                                                                                                                                                        ccGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTGTGTGAGTGTGAGTGCGCCATGACGAGTCATCCCTTAATTATTCTCACTTAACTTTATGAcatca                      >  1:1059750/1‑289 (MQ=255)
                                                                                                                                                                                                                                                        ccGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTGTGTGAGTGTGAGTGCGCCATGACGAGTCATCCCTTAATTATTCTCACTTAACTTTATGAcatca                      >  1:541002/1‑289 (MQ=255)
                                                                                                                                                                                                                                                        ccGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCAGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCCGGTGTGAGGACGTGGGTGAGTGTGAGTGCGCCATGACGAGTCATCCCTTAATTATTCTCACTTAACTTTATGAcatca                      >  2:796316/1‑289 (MQ=255)
                                                                                                                                                                                                                                                          gAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTGTGTGAGTGTGAGTGCGCCATGACGAGTCATCCCTTAATTATTCTCACTTAACTTTATGACATCATa                    <  1:394569/289‑1 (MQ=255)
                                                                                                                                                                                                                                                          gAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTGTGTGAGTGTGAGTGCGCCATGACGAGTCATCCCTTAATTATTCTCACTTAACTTTATGACATCATa                    <  1:1197952/289‑1 (MQ=255)
                                                                                                                                                                                                                                                           aaaGGGTGGGGAATGGGGGGAGGACGACGTGAAAATTGAACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTGTGTGAGTGTGAGTGCGCCATGACGAGTCATCCCTTAATTATTCTCACTTAACTTTATGACATCATa                    <  2:1904966/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                     gAATGGTGGGAGGACGACGTGAAAATTGAACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATAGGACCCGCATCGGCCAGAAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTGTGTGAGTGTGAGTGCGCCATGACGAGTCATCCCTTAATTATTCTCACTTAACTTTATGACATCATACTGCTTTTAg          <  1:705374/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                           tggGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCTGTCAACATATGACCCGCATCGGACAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTGTGTGAGTGTGAGTGCGCCATGACGAGTCATCCCTTAATTATTCTCACTTAACTTTATGACATCATACTGCTTTTAGAAGTGa    <  1:1426189/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                             ggaggaCGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTGTGTGAGTGTGAGTGCGCCATGACGAGTCATCCCTTAATTATTCTCACTTAACTTTATGACATCATACTGCTTTTAGAAGTGaaa  <  1:1851001/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                  
AGGTCCCCGAGCACATGCAGTGCCGCTGCTCGTACGTTGAGGTTTTTCTCTTCGCTGCCGTGATGAAGTAACCAGAAAGAAAGTATATTTGCCAGCAACCCAGCCACGGCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAG‑GGCTATGGCATTCACAAACGCCGCGAGCGT‑GGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGACTAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGACTGGACGTGTGACTGTGACTGTGCGCCATGACGAGTCATCCCTTAATTATTCTCACTTAACTTTATGACATCATACTGCTTTTAGAAGTGAAA  >  CP042583/647167‑647721

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A