Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F210 I1 R1
|
4930 |
262.8 |
3829204 |
96.6% |
3699011 |
272.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
648,971 |
3 bp→TCG |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 648,971 | 0 | A | T | 99.3%
| 645.5
/ NA
| 281 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/1); major base T (146/131); minor base G (1/1); total (147/134) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 648,972 | 0 | G | C | 98.6%
| 649.5
/ NA
| 281 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/3); major base C (147/127); minor base A (0/4); total (147/134) |
| Fisher's exact test for biased strand distribution p-value = 4.81e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 648,973 | 0 | C | G | 100.0%
| 662.3
/ NA
| 281 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (147/134); total (147/134) |
Only 100 of 281 total aligned reads displayed.
GGCGCTGCGTGAAGAGCTGAAAGATGAGCTGGAAATCGTAATGCGCGTCTATTTTGAAAAGCCGCGTACCACGGTGGGCTGGAAAGGGCTGATTAACGATCCGCATATGGATAATAGCTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAAAGCCAGGTGCACCGCGAACTGGCAAGTGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATAGC‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑GCGCGGCGGTAAAGAGCCTAACTACAGCGCGAAGCACGTTGCTGAAGTGAAAGAAGGGCTGAACAAAGCAGGCCTGCCAGCAC > CP042583/648697‑649247
|||
gcTGCGTGAAGAGCTGAAAGATGAGCTGGAAATCGTAATGCGCGTCTATTTTGAAAAGCCGCGTACCACGGTGGGCTGGAAAGGGCTGATTAACGATCCGCATATGGATAATAGCTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTTGGGCGCAATTG‑GCGCACGTACCCACGAAGCGCAGGTGCACCGCCaa > 2:1473766/1‑289 (MQ=255)
cGTGAAGAGCTGAAAGATGAGCTGGAAATCGTAATGCGCGTCTATTTTGAAAAGCCGCGTACCACGGTGGGCTGGAAAGGGCTGATTAACGATCCGCATATGGATAATAGCTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGACCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGGTCACCGCGAAccg > 2:620746/1‑286 (MQ=255)
gcggAAAGCTGAGCTGGAAATCGTAATGGGCGTCTATTTTGAAAAGCAGCGTACCACGGTGGGCTGGAAAGGGCTGATTAACGATCCGCATATGGATAATAGCTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCatcagg < 2:1244855/285‑6 (MQ=255)
gCTGAAAGATGAGCTGGAAATCGTAATGCGCGTCTATTTTGAAAAGCCGCGTACCACGGTGGGCTGGAAAGGGCTGATTAACGATCCGCATATGGATAATAGCTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCatcagg > 1:1016487/1‑283 (MQ=255)
tGGAAATCGTAATGCGCGTCTATTTTGAAAAGCCGCGTACCACGGTGGGCTGGAAAGGGCTGATTAACGATCCGCATATGGATAATAGCTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGt < 1:30076/289‑1 (MQ=255)
tGGAAATCGTAATGCGCGTCTATTTTGAAAAGCCGCGTACCACGGTGGGCTGGAAAGGGCTGATTAACGATCCGCATATGGATAATAGCTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGt < 1:7257/289‑1 (MQ=255)
aaTCGTAATGCGCGTCTATTTTGAAAAGCCGCGTACCACGGTGGGCTGGAAAGGGCTGATTAACGATCCGCATATGGATAATAGCTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGc < 1:215362/289‑1 (MQ=255)
aTGCGCGTCTATTTTGAAAAGCCGCGTACCACGGTGGGCTGGAAAGGGCTGATTAACGATCCGCATATGGATAATAGCTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCaaaa < 2:415774/289‑1 (MQ=255)
cgTCTATTTTGAAAAGCCGCGTACCACGGTGGGCTGGAAAGGGCTGATTAACGATCCGCATATGGATAATAGCTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGc > 1:457115/1‑289 (MQ=255)
gTCTATTTTGAAAAGCCGCGTACCACGGTGGGCTGGAAAGGGCTGTTTAACGATCCGCATATGGATAATAGCTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGc > 1:1897320/1‑288 (MQ=255)
gTCTATTTTGAAAAGCCGCGTACCACGGTGGGCTGGAAAGGGCTGATTAACGATCCGCATATGGATAATAGCTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCttt > 2:1841105/1‑262 (MQ=255)
gTCTATTTTGAAAAGCCGCGTACCACGGTGGGCTGGAAAGGGCTGATTAACGATCCGCATATGGATAATAGCTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGc > 1:1167354/1‑288 (MQ=255)
tATTGTGACAAGCCGCGTACCCCGGTGGGCTGGAAAGGGCTGATTAACGATCCGCATATGGATAATAGCTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑Cg < 2:1240166/289‑1 (MQ=255)
ccGCGTACCACGGTGGGCTGGAAAGGGCTGATTAACGATCCGCATATGGATAATAGCTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGAtt < 1:1392592/288‑1 (MQ=255)
tgCTGGAAAGGGCTGAATGACAATTCGCAGATGGATAATAGGTTCCAGATCAACGACGGTCGGCGTATAGCCCGTAAAGTGATGCTTGATAGTAACGAGAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGAt < 2:1726432/287‑1 (MQ=255)
gCTGATTAACGATCCGCACATGGATAATAGCTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGaa < 1:1434666/205‑1 (MQ=255)
aTTAACGATCCGCATATGGATAATAGCTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGccgccg > 2:1414157/1‑289 (MQ=255)
ttAACGATCCGCATATGGATAATAGCTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGccgccg < 1:1473766/288‑1 (MQ=255)
cGATCCGCATATGGATAATAGCTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTgcg < 1:1222836/289‑1 (MQ=255)
tCCGCATATGGATAATAGCTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGGGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGcgccg < 2:1488281/289‑1 (MQ=255)
cGCATATGGATAATAGCTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGcgccgc > 1:771107/1‑288 (MQ=255)
cGCATATGGATAATAGCTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGcgccgc > 1:1760903/1‑288 (MQ=255)
gcattgggatctaaGCTTCCAACTAAACGAGGGTCTGCGTTTACCCCGTAAAGTACTGCTTGAAATTAACAACAGCGGTCTGCAAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCAc < 2:1759937/276‑1 (MQ=255)
ggATAATAGCTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCtt > 1:1804687/1‑288 (MQ=255)
ataataGCTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGCCGGTACGATTAAAGTGGCTACCGATGCCATTAATGCCGTCGGCGCGCCGCACTGCtt > 2:801021/1‑286 (MQ=255)
taataGCTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTaa < 1:1150504/261‑1 (MQ=255)
taGCTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTTGCCATCGATGCCATTAATGCCCCCGGTGCCCCGCACCGCTTCCTGTc > 2:1165159/1‑288 (MQ=255)
taGCTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGcgccg < 1:49769/274‑1 (MQ=255)
taGCTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTc > 2:941395/1‑288 (MQ=255)
taGCTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTGGTCCGGTCGGCTTCAAAAAT‑GCACTCCGCGGTACCATTAAAGTGGCTCTCGATTCCATTAATCCCGCCGGGCGGCCGCACTGTTTCTTGt > 2:1085544/1‑287 (MQ=255)
gCTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGt > 1:981191/1‑289 (MQ=255)
cTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCTGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGTGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTa > 2:224339/1‑289 (MQ=255)
tCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAAc > 2:579335/1‑289 (MQ=255)
aaCGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATggg > 1:860043/1‑289 (MQ=255)
acgacgGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATgggg < 1:1299073/289‑1 (MQ=255)
ggTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCAtt < 1:1524499/289‑2 (MQ=255)
cTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCAttcgg < 2:368250/289‑5 (MQ=255)
cGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCAttcggcga > 1:186357/1‑282 (MQ=255)
aGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGCTtgtg > 2:499638/1‑289 (MQ=255)
gCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGAt < 1:1711610/219‑1 (MQ=255)
gCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGa > 1:1692192/1‑289 (MQ=255)
gTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATa > 1:1146488/1‑288 (MQ=255)
aaaTTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCa > 1:878100/1‑289 (MQ=255)
aaTTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAg < 1:1085544/289‑1 (MQ=255)
ctgctTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTa > 2:1122580/1‑289 (MQ=255)
ctTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAACAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTTCGCCGCACTGCTTCCTGTCCGTCACGAATGGTGGGCATTCT‑GCGCAGGTGAAGACGCGCGGTAACg > 2:53337/1‑289 (MQ=255)
gATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTAGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCg < 1:669974/289‑1 (MQ=255)
tatTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCCTCAAAAATGGCAC‑CCACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGATTCCTGTCCGTAACGAAAGGGGGGCATTCG‑GCGATGGTGAATACACACGGTAACGGCGAt > 2:870062/1‑289 (MQ=255)
ttACCGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGc < 1:411048/284‑1 (MQ=255)
ttAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTg < 1:1531163/289‑1 (MQ=255)
ttAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTg < 1:833619/289‑1 (MQ=255)
aaCGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGcc < 1:602321/289‑1 (MQ=255)
aCGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAc‑c > 1:1001688/1‑167 (MQ=255)
aCGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAc‑c < 2:1001688/167‑1 (MQ=255)
aCGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCa > 1:1177023/1‑289 (MQ=255)
aGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCa > 1:1647370/1‑289 (MQ=255)
cGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCAt > 1:1627073/1‑288 (MQ=255)
cTGCCAGCGGGAGGTGATTTTCTGGATTAGATCACCC‑CCCAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACGGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGA‑TAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑gcg < 2:1186411/289‑1 (MQ=255)
tGCCAGCGGCAGGTGATTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑gcg < 1:1556592/289‑1 (MQ=255)
tGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑gcg < 1:468789/289‑1 (MQ=255)
tGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑gc > 1:625251/1‑288 (MQ=255)
gccatggcaaGGGGAGTTTTGGGAAATGATCACCCACCAAATAT‑GCGCTAACATGATGAGCTGGGGCGAAATTG‑GCGCACGTACCACAGAATCGCAGGTGAACCGCGAACGGGCAACAGGGCTTTGTCGTCCGGGCGTCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCAATTAATGCCGCCGGTGCGCCGAACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑gcg < 2:1529321/279‑1 (MQ=255)
cAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑GCgcgg < 1:941395/289‑1 (MQ=255)
gCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GAGGTTTTTAATACCCGGTGTAAGGGGCACTGCCATTTCATTcctgggtgcggat > 2:922900/1‑277 (MQ=255)
aGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCCC‑CGACGGTACGATTAAAGTGGCTAGCGATGCCATTAATCCCGCCGGTCCGCGCCACTCCTCCCGTCCCGTAACG‑AATTGGGGCATTTCGGCGATTTTGAAAACCAGCGGTAACGGCGATTCCCA‑ATCATTTTGGCGCGGCGGaaaa > 2:1683405/1‑289 (MQ=255)
gTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑GCGCGGCGGTAAag < 1:444068/288‑1 (MQ=255)
cGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATCGCCATATCATTCT‑GCGCGGCGGTAAagag > 2:728978/1‑280 (MQ=255)
ccc‑cACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑GCGCGGCGGTAAAGAGCCTAACTACAGCGCGAAGc > 1:648429/1‑288 (MQ=255)
acaATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑GCGCGGCGGTAAAGAGCCTAACTACAGCGCGAAGCACGtt > 1:1842607/1‑289 (MQ=255)
acaATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑GCGCGGCGGTAAAGAGCCTAACTACAGCGCGAAGCACGtt > 2:1659613/1‑289 (MQ=255)
caATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTTTCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCC‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑GCGCGGCGGTAAAGAGCCTAACTACAGCGCGAAGCACGtt > 1:1324692/1‑288 (MQ=255)
caATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGccgccg < 2:1615420/160‑1 (MQ=255)
aaTATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCAttcggcga > 2:385370/1‑200 (MQ=255)
aaTATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCAttcggcga < 1:385370/207‑8 (MQ=255)
aaTATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑GCGCGGCGGTAAag > 1:1050290/1‑261 (MQ=255)
ttgctcGCTGACCTGGTGGGCTGTGGCGCAATTG‑GGGCACGTACCACCGAATCGCAGCGGCACCGCGAACTGGCATCAGTGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑GCGCGGCGGTAAAGAGCCTAACTACAGCGCGAAGCACGTTGCTg < 2:30147/286‑1 (MQ=255)
ctcGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑GCGCGGCGGTAAag > 2:439912/1‑256 (MQ=255)
ctcGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑GCGCGGCGGTAACGAGCCTAACTACAGCGCGAAGCCCGTTGCCGAAg > 2:847469/1‑289 (MQ=255)
aCCTGATGAGCTGGGGCGCAATTG‑GCGTACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑g < 1:323635/236‑1 (MQ=255)
gatgaGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATCGTGAATACCAGCGGTAACGGCGa < 2:340185/216‑1 (MQ=255)
gtgaGTTGGGGGGCAATTG‑GGCGACGTACCACCGAATGGCAGGTGACGCGGGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTAAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑GCGCGGCGGTAAAGAGCCTAACTACAGCGCGAAGCACGTTGCTGAAGTGAAAGAAggg < 2:1905595/287‑1 (MQ=255)
ctgaGCTGGGGCGCAATTG‑GGGACCGTACCACCCACTCGCAGGTGCACCGCGAACTGGCATAAGGGCTTTCTTTTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑GCGCGGCGGTAAAGAGCCTAACTACAGCGCGAAGCACGTTGCTGAAGTGAAAGAAggg < 2:1705407/287‑1 (MQ=255)
atgaGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑GCGCGGCGGTAAAGAGCCTAACTACAGCGCGAAGCACGTTGCTGAAGTGAAAGAAggg < 1:579335/288‑1 (MQ=255)
atgaGCTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑GCGCGGCGGTAAAGAGCCTAACTACAGCGCGAAGCACGTTGCTGAAGTGAAAGAAgg > 1:961125/1‑287 (MQ=255)
atgaagagggCGCAAATGAGCGGAGGTACCACAGAATAGCTGGTGCACCGCGAACTTGCATCAGGGCTTTCTTGTCCGGTGGGCTTCCAAAATGTCAC‑CGCAGGTAGGATTAAAGTGGCTATCGATGCCATTAAGGCCGGCGGGCGGCCGTACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACTGCGATTGGCATATCATTCT‑GCGCGGTGGTAAAGAGCCTAACTACAGCGCGAAGCACGTTGCTGAAGTGAAAGAAggg < 2:977289/281‑1 (MQ=255)
cTGGGGCGCAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑GCGCGGCGGTAAAGAGCCTAACTACAGCGCGAAGCACGTTGCTGAAGTGAAAGAAGGGCTGAAc > 2:1867121/1‑289 (MQ=255)
cTGGGGAGCAATTG‑GGGCAAGTACAACCGAATAGCAGGTCCACCGAGATCTGGCATCAGGCCTTTCTTGTCCGGTCGGTTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCAGTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑GCGCGGCGGTAAAGAGCCTAACTACAGCGCGAAGCACGTTGCTGAAGTGAAAGAAGGGCTGaa < 2:1548564/288‑1 (MQ=255)
gcgcAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑GCGCGGCGGTAAAGAGCCTAACTACAGCGCGAAGCACGTTGCTGAAGTGAAAGAAGGGCTGAACAAAGc > 1:230350/1‑289 (MQ=255)
gcgcAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑GCGCGGCGGTAAAGAGCCTAACTACAGCGCGAAGCACGTTGCTGAAGTGAAAGAAGGGCGGAACAAAGc > 1:868616/1‑289 (MQ=255)
cAATTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑GCGCGGCGGTAAAGAGCCTAACTACAGCGCGAAGCACGTTGCTGAAGTGAAAGAAGGGCTGAACAAAGCAg > 2:528015/1‑288 (MQ=255)
aaTTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑GCGCGGCGGTAAAGAGCCTAACTACAGCGCGAAGCACGTTGCTGAAGTGAAAGAAGGGCTGAACAAAGCAgg < 1:1744016/288‑1 (MQ=255)
aaTTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑GCGCGGCGGTAAAGAGCCTAACTACAGCGCGAAGCACGTTGCTGAAGTGAAAGAAGGGCTGAACAAAGCAgg < 1:531215/288‑1 (MQ=255)
aaTTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑GCGCGGCGGTAAAGAGCCTAACTACAGCGCGAAGCACGTTGCTGAAGTGAAAGAAGGGCTGAACAAAGCAgg < 1:528015/288‑1 (MQ=255)
aTTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑GCGCGGCGGTAAAGAGCCTAACTACAGCGCGAAGCACGTTGCt < 2:1338993/258‑1 (MQ=255)
aTTG‑GCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑GCGCGGCGGTAAAGAGCCTAACTACAGCGCGAAGCACGTTGCt > 1:1338993/1‑258 (MQ=255)
ttG‑GCGCAACTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGTTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑GCGCGGCGGTAAAGAGCCTAACTACAGCGCGAAGCACGTTGCTGAAGTGAAAGAAGGGCTGAACAAAGCAGGCCt < 1:200340/289‑1 (MQ=255)
aCGTACCACCGAAACGCAGGTGCACCGGGAACTGGCATCAGGGCTTTCTTGGCCGGTCCGCTTCCAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑GCGCGGCGGTAAAGAGCCTAACTACAGCGCGAAGCACGTTGCTGAAGTGAAAGAAGGGCTGAACAAAGCAGGCCTGCCAGca < 1:1683405/289‑1 (MQ=255)
cGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTGACGGCGATTGCCATATCATTCT‑GCGCGGCGGTAAAGAGCCTAACTACAGCGCGAAGCACGTTGCTGAAGTGAAAGAAGGGCTGAACAAAGCAGGCCTGCCAGcac > 1:1580599/1‑289 (MQ=255)
cGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑GCGCGGCGGTAAag < 2:350679/220‑1 (MQ=255)
cGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCG‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑GCGCGGCGGTAAag > 1:350679/1‑220 (MQ=255)
|||
GGCGCTGCGTGAAGAGCTGAAAGATGAGCTGGAAATCGTAATGCGCGTCTATTTTGAAAAGCCGCGTACCACGGTGGGCTGGAAAGGGCTGATTAACGATCCGCATATGGATAATAGCTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCC‑CACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTG‑GCGCACGTACCACCGAAAGCCAGGTGCACCGCGAACTGGCAAGTGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCAC‑CGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATAGC‑GCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCT‑GCGCGGCGGTAAAGAGCCTAACTACAGCGCGAAGCACGTTGCTGAAGTGAAAGAAGGGCTGAACAAAGCAGGCCTGCCAGCAC > CP042583/648697‑649247
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
