Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 669,078 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583669,0780GC99.5% 481.3 / NA 205intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (113/91);  total (113/92)
Fisher's exact test for biased strand distribution p-value = 4.49e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583669,0790CG99.0% 475.4 / NA 205intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/1);  new base G (111/91);  total (113/92)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583669,0800TA99.0% 464.4 / ‑6.1 205intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (1/0);  major base A (111/90);  minor base G (0/2);  total (113/92)
Fisher's exact test for biased strand distribution p-value = 2.04e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 205 total aligned reads displayed.

TTACGCCGCATCCGGCAAATAGTTAATTGCTCTTAC‑TTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGTAGTTAGTGTCATTCAGATTGCGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGGCTG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGACTGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAG  >  CP042583/668800‑669357
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                      
ttACGCCGCATCCGGCAAATAGTTAATTGCTCTTAC‑TTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGTAGTTAGTGTCATTCAGATTGCGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCa                                                                                                                                                                                                                                                                               >  1:1043434/1‑289 (MQ=255)
 tACGCCTCATCCAGCAACTAGTTAATTGCACTACC‑TTCTTCGCCTCTGCAACGACTTTCCTACCCACGCCGCGGTTATTGTATTCCCACGTGCGGTTGTAGTTAGTGTCATTCAGATAGAGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCAGACCGTTGGTA‑TTGGCATCGACATCCAGCGAG‑CGGccccg                                                                                                                                                                                                                                                                              <  2:216248/289‑3 (MQ=255)
 tACGCCGCATCCGGCAAATAGTTAATTGCTCTTAC‑TTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGTAGTTAGTGTCATTCAGATTGCGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAg                                                                                                                                                                                                                                                                              <  2:333724/289‑1 (MQ=255)
    gccgcGTCCAGCAAATAGTTAATTGCTCTTACTTTCTTC‑CCTCTGCAACCACTTTGCTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGTAGTTAGTGTCATTCAGATTGCGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTg                                                                                                                                                                                                                                                                           <  2:1385577/289‑1 (MQ=255)
       gcATCCGGCAAATAGTTAATTGCTCTTAC‑TTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGTAGTTAGTGTCATTCAGATTGCGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTgcg                                                                                                                                                                                                                                                                         >  1:644611/1‑288 (MQ=255)
         aTCCTGCAAATAGTTAATTGCTCTTAC‑TTCTTCGCCTCTGCAACCACTTTACTACCCTCGCCGCGGTTATTGTATTCCCACATGCGGTTGTAGTTAGTGTCATTCAGATTGCGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCca                                                                                                                                                                                                                                                                      <  1:193903/289‑1 (MQ=255)
         aTCCGGCAAATAGTTAATTGCTCTTAC‑TTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGTAGTTAGTGTCATTCAGATTGCGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATT‑CCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCca                                                                                                                                                                                                                                                                      <  1:1518542/288‑1 (MQ=255)
           ccGGCAAATAGTTAATTGCTCTTAC‑TTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGTAGTTAGTGTCATTCAGATTGCGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCcaca                                                                                                                                                                                                                                                                    <  1:1796712/289‑1 (MQ=255)
            cGGCAAATCGTTAGTTGCTGTGAC‑TGCTTCGCCTCTGCAACCGCTTTACTACCCACGCCGCGGTTAGTGGATTCCCACATGCGGTTGTAGTTAGTGTCATTCAGATTGCGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCacac                                                                                                                                                                                                                                                                   <  2:1043434/289‑1 (MQ=255)
                        aaTTGCTCTTAC‑TTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGTAGTTAGTGTCATTCAGATTGCGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGaaa                                                                                                                                                                                                                                                        >  1:730319/1‑288 (MQ=255)
                               ctTAC‑TTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGTAGTTAGTGTCATTCAGATTGCGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCCCCACACCATCCCCGAACGCATTGaa                                                                                                                                                                                                                                                >  2:942162/1‑289 (MQ=255)
                                        ttcGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGTAGTTAGTGTCATTCAGATTGCGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGt                                                                                                                                                                                                                                        >  2:888389/1‑289 (MQ=255)
                                         tcGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGTAGTTAGTGTCATTCAGATTGCGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAC‑CGGCCCAGTTGCGCCACACCATCACCGAAACAATTGAAACGGCTggt                                                                                                                                                                                                                                       >  2:1103524/1‑287 (MQ=255)
                                          cGCCTCTGCAACCACGTTACGATCCACGCTGCGGTTATGGTAGTCACACATGCGGTTGTAGTTAGGGTCATTACGATTGCGCTGTAGTTCGTCGTTATCATCTACGCTTGCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGGGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACAGCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGttt                                                                                                                                                                                                                                      <  2:1641913/289‑1 (MQ=255)
                                                 gCAAGCACTTTACTACCCCGGCGTCGGTTATTGTATTCCCACATGCGGTTGTAGTGAGTGTCATTCAGATTGCGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGa                                                                                                                                                                                                                               <  2:331284/289‑1 (MQ=255)
                                                             ctacCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGTAGTTAGTGTCATTCAGATTGCGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCgtagt                                                                                                                                                                                                                   <  1:1140756/289‑1 (MQ=255)
                                                             ctacCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGTAGTTAGTGTCATTCAGATTGCGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCgtagt                                                                                                                                                                                                                   <  1:662562/289‑1 (MQ=255)
                                                                cccACGCCGCGGTTATTGTATTCCCACATGCGGTTGTAGTTAGTGTCATTCAGATTGCGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCACAGTTGCGCCACACCATCACCGAAAGCATTTAAACGGCTGTTTACGGCGACGAAACCggagtact                                                                                                                                                                                                                >  2:405972/1‑287 (MQ=255)
                                                                       cgcgGTTATTGTATTCCCACATGCGGTTGTAGTTAGTGTCATTCAGATTGCGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTATTTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTgg                                                                                                                                                                                                          <  1:1569371/289‑1 (MQ=255)
                                                                       cgcgGTTATTGTATTCCCACATGCGGTTGTAGTTAGTGTCATTCAGATTGCGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAACCCGTAGTACATGTTgg                                                                                                                                                                                                          >  1:1782195/1‑288 (MQ=255)
                                                                       cgcgGTTATTGTATTCCCACATGCGGTTGTAGTTAGTGTCATTCAGATTGCGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTgg                                                                                                                                                                                                          <  1:1107210/288‑1 (MQ=255)
                                                                          ggTTATTGTATTCCCACATGCGGTTGTAGTTAGTGTCATTCAGATTGCGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAg                                                                                                                                                                                                      >  2:845838/1‑289 (MQ=255)
                                                                          ggTTATTGTATTCCCACATGCGGTTGTAGTTAGTGTCATTCAGATTGCGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGATGTTTACGGCCAGTAAACCGTAGAAAATGTTGGACAg                                                                                                                                                                                                      >  2:1447212/1‑289 (MQ=255)
                                                                          ggTTATTGTATTCCCACATGCGGTTGTAGTTAGTGTCATTCAGATTGCGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCAACTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGa                                                                                                                                                                                                         >  1:1292712/1‑286 (MQ=255)
                                                                                      cccACATGCGGTTGTAGTTAGTGTCATTCAGATTGCGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTg                                                                                                                                                                                           >  2:740822/1‑288 (MQ=255)
                                                                                         acaTGCGGTTGTAGTTAGTGTCATTCAGATTGCGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACCCCACCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAAACGTAGTAAATGTTGGa                                                                                                                                                                                                         >  2:1772105/1‑271 (MQ=255)
                                                                                                  agcgacaggtgtCATTCAGATTGCGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGc                                                                                                                                                                              <  1:382375/281‑1 (MQ=255)
                                                                                                   gTAGTTAGTGTCATTCAGATTGCGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGct                                                                                                                                                                             <  1:81593/289‑1 (MQ=255)
                                                                                                           tgtCATTCAGATTGCGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTg                                                                                                                                                                     >  2:148293/1‑289 (MQ=255)
                                                                                                           tgtCATTCAGATTGCGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCCAG‑CGGCCCAGTTGCCCCACACCATCACCGGAAGCATTGAAACGGCTGTTTACGGCTAGGAAAACGTAGTAAAAGTTGGACAGCGTAGCCGGTGAAAAGACAAACGcctgtccctt                                                                                                                                                                     >  2:1303802/1‑280 (MQ=255)
                                                                                                               aTTCAGATTGCGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGt                                                                                                                                                                  >  1:566891/1‑288 (MQ=255)
                                                                                                                     aTTGCGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGTGGAAACCGGAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACCTACGCTGCTTGcggcggtgtctct                                                                                                                                                           >  2:382375/1‑277 (MQ=255)
                                                                                                                     aTTGCGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACgtgag                                                                                                                                                           >  2:169859/1‑285 (MQ=255)
                                                                                                                         cgcTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAACCGGACGATTCGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTCTCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACCCCATCCCCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAACCCGTAGTAAATGTTGGACAGCGTATCCGGTGCCAACACATACGTTTCTTTCTGAGTaagtgagtta                                                                                                                                                        >  2:1753393/1‑279 (MQ=255)
                                                                                                                            tGTATTTCTTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTcacc                                                                                                                                                     <  1:866238/288‑1 (MQ=255)
                                                                                                                                          atcatcTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGgtg                                                                                                                                      <  1:930579/289‑1 (MQ=255)
                                                                                                                                           tcatcTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGgtgt                                                                                                                                     <  1:460109/289‑1 (MQ=255)
                                                                                                                                             atcTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTa                                                                                                                                   <  1:230686/289‑1 (MQ=255)
                                                                                                                                                   gCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGaa                                                                                                                              <  2:1738292/288‑1 (MQ=255)
                                                                                                                                                       ccGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCGGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAACCACATACGCTTCTTGCTGAGTAAGTTAGTTCAACACGCGGAAGTCGGTGTTATCGAAcacc                                                                                                                          >  2:523014/1‑288 (MQ=255)
                                                                                                                                                                     aaaCGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCGGTTTACGGCGAGGAAACCGGAGTAAATGTTGGACAGAGTAGCCGGTGCAAAGACATACGCTTCTTGCTGCGTACGGGAGTTGACCACGCGGAATTCTGAGTTATCGCACACCAATGCCCCGCAAcc                                                                                                            >  2:1258032/1‑288 (MQ=255)
                                                                                                                                                                       aaggACAAGTAGGGATCCCCGCATCGGCCCACGGGTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGa                                                                                                         <  2:769611/287‑1 (MQ=255)
                                                                                                                                                                       aCGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCCCTGCGCCGCGACCAGa                                                                                                         >  1:1372232/1‑289 (MQ=255)
                                                                                                                                                                            cGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACg                                                                                                     <  1:1103524/288‑1 (MQ=255)
                                                                                                                                                                            cGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGa                                                                                                    <  1:978534/289‑1 (MQ=255)
                                                                                                                                                                            agattcggagtgaCCGCCTCGGCCCACGGTTTAGCCAGGTTACAACCTTCTTGGCTGGCGCTAACACGGACCACCACCGGCCCGTTGGTA‑TTGGCATCACCATCCAGCGAG‑CGGCCCAGTTGCGCCACACCAGCACCGAAAGCATTGAAACGGCTGTTTACGGCTAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGa                                                                                                    <  2:443924/277‑1 (MQ=255)
                                                                                                                                                                              aTTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCt                                                                                                                                                                      <  1:1886646/221‑1 (MQ=255)
                                                                                                                                                                                      tCACCGTCTCGCACCACAGTTTATCCATGTTATAACCCTTGTGTATTGCGCGATCACGGACCACCACCTGACCTTTGAAA‑TTGGCATCATCATCC‑GCCAGACGGCCCAGTTCCGCAGCACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACATCACTGCGCCGCGACCAGAAACGATATCCACAt                                                                                           <  2:243084/288‑1 (MQ=255)
                                                                                                                                                                                      tCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCcaca                                                                                            <  1:148293/287‑1 (MQ=255)
                                                                                                                                                                                      tCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATc                                                                                          <  1:364173/289‑1 (MQ=255)
                                                                                                                                                                                      tCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCAGCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACAt                                                                                           <  1:1839912/288‑1 (MQ=255)
                                                                                                                                                                                         ccGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATccc                                                                                        >  1:748144/1‑288 (MQ=255)
                                                                                                                                                                                           gCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCtt                                                                                     <  2:157898/289‑1 (MQ=255)
                                                                                                                                                                                            cATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCtt                                                                                     >  2:696682/1‑288 (MQ=255)
                                                                                                                                                                                            cATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTc                                                                                    >  1:612907/1‑289 (MQ=255)
                                                                                                                                                                                                ggCCCACGGTTCAGCCTTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAACCGGCTGTTTACGGCGAGGATACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATg                                                                                <  1:435585/289‑1 (MQ=255)
                                                                                                                                                                                                 gCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGt                                                                               >  1:1278393/1‑289 (MQ=255)
                                                                                                                                                                                                  cccACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGt                                                                               <  2:1787485/288‑1 (MQ=255)
                                                                                                                                                                                                      cGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTg                                                                          <  1:1678189/289‑1 (MQ=255)
                                                                                                                                                                                                            aGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGt                                                                     >  1:880078/1‑288 (MQ=255)
                                                                                                                                                                                                                 tgtTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGc                                                                                                                                                                                                >  2:1418991/1‑160 (MQ=255)
                                                                                                                                                                                                                 tgtTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAACCGATATCCACATCCCCTTCAATGTAGCTGTTGTTCCCCa                                                                >  2:19796/1‑288 (MQ=255)
                                                                                                                                                                                                                 tgtTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAAAGATAACCACATCCCCCTCAATGTAGCTGTTGGGCACCa                                                                >  2:1075257/1‑288 (MQ=255)
                                                                                                                                                                                                                 tgtTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCCACCAGAAACGATATCCAAATCCCCTTCACTGTAGCTGTTGGTCACCa                                                                >  1:1411558/1‑288 (MQ=255)
                                                                                                                                                                                                                   ttAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTTGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACACGGAATTCGGTGTTATCGAACCCCACTGCGCCGCGACCAGACAGCATATCCACCTCCCATTCCATCTAGCTGTTGCTCTccccg                                                              >  2:617841/1‑285 (MQ=255)
                                                                                                                                                                                                                       aaCCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTAcg                                                         <  1:312684/289‑1 (MQ=255)
                                                                                                                                                                                                                        aCCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTAcg                                                         >  2:1263662/1‑288 (MQ=255)
                                                                                                                                                                                                                           ttCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCcaca                                                                                            >  2:97546/1‑250 (MQ=255)
                                                                                                                                                                                                                            tCGTTGATGGCGCTATCACGGATCTCCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTAcgcg                                                       >  1:570876/1‑286 (MQ=255)
                                                                                                                                                                                                                            tCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTAcgct                                                       >  1:1029520/1‑285 (MQ=255)
                                                                                                                                                                                                                            tCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTAcgcg                                                       >  1:907052/1‑286 (MQ=255)
                                                                                                                                                                                                                             cGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTg                                                   >  2:583070/1‑289 (MQ=255)
                                                                                                                                                                                                                             cGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTg                                                   >  1:1592682/1‑289 (MQ=255)
                                                                                                                                                                                                                             cGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGAAATCCACATCCCCTTCAATTTAGCTGGTGGTCCACAGCGTCCGCGGcgg                                                   >  2:1838417/1‑287 (MQ=255)
                                                                                                                                                                                                                                          aTCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGCGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTcc                                      >  1:1854400/1‑289 (MQ=255)
                                                                                                                                                                                                                                             ccGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGa                                   <  1:1656474/288‑1 (MQ=255)
                                                                                                                                                                                                                                             aCGGATCACCTCCTGACCGTTAGTA‑TTGGCATCAACATCCCGCGAG‑CGGCCCAGTTGCGCAACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGa                                   <  1:1550607/289‑1 (MQ=255)
                                                                                                                                                                                                                                             aCGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGa                                   <  1:1154828/289‑1 (MQ=255)
                                                                                                                                                                                                                                             aCGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGa                                   <  1:1876268/289‑1 (MQ=255)
                                                                                                                                                                                                                                             aCGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGa                                   <  2:1018630/289‑1 (MQ=255)
                                                                                                                                                                                                                                             aCGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGa                                   <  1:1018113/289‑1 (MQ=255)
                                                                                                                                                                                                                                             aCGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGa                                   <  2:1347695/289‑1 (MQ=255)
                                                                                                                                                                                                                                             aCGGATCACCACCTGACCGTTGGTA‑GTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGCGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGa                                   <  2:1854400/289‑1 (MQ=255)
                                                                                                                                                                                                                                                     ccaccTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGgtgt                                                                                                                                     <  2:922445/183‑1 (MQ=255)
                                                                                                                                                                                                                                                     ccaccTGACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGGGCCGCGACCAGCAACGATATCCACATCCCCTCCAATGTAACCGTTGGTCACCAGCGTCCGCGGTGGACGATCCGTTCACAGACgaggctg                           >  2:1656474/1‑283 (MQ=255)
                                                                                                                                                                                                                                                           gACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCacac                      >  1:1433688/1‑288 (MQ=255)
                                                                                                                                                                                                                                                           gACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCacac                      >  1:162478/1‑288 (MQ=255)
                                                                                                                                                                                                                                                           gACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCacac                      >  2:1199032/1‑288 (MQ=255)
                                                                                                                                                                                                                                                           gACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCacac                      >  1:332106/1‑288 (MQ=255)
                                                                                                                                                                                                                                                           gACCGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACAcc                     >  1:761001/1‑289 (MQ=255)
                                                                                                                                                                                                                                                             ccGTTGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCg                    >  1:1820022/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                ttGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGa                                                                                                         <  2:1596084/200‑1 (MQ=255)
                                                                                                                                                                                                                                                                ttGGTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGt                >  1:344330/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                 tGGTA‑TTGGCATCATCATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGtt               <  1:1343201/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                  ggTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTg              <  1:1447212/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                   gTA‑TTGGCATCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGc                                                                            >  1:956814/1‑226 (MQ=255)
                                                                                                                                                                                                                                                                            aTCAACATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGATGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAaag     >  1:172415/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                               aaCATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGCTTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAaagaag  >  1:1769490/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                               aaCATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGCCCGTTCTGCACACCCCTGTTGGTGAAAaagaag  >  2:727389/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                               aaCATCCAGCGAG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAaagaag  >  1:831917/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                      
TTACGCCGCATCCGGCAAATAGTTAATTGCTCTTAC‑TTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGTAGTTAGTGTCATTCAGATTGCGCTGTATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTTCGTTGATGGCGCTATCACGGATCACCACCTGACCGTTGGTA‑TTGGCATCAACATCCAGGCTG‑CGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGACTGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTGCGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAG  >  CP042583/668800‑669357

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A