Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F210 I1 R1
|
4930 |
262.8 |
3829204 |
96.6% |
3699011 |
272.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
755,650 |
3 bp→TCG |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 755,650 | 0 | A | T | 98.3%
| 546.2
/ NA
| 235 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (126/105); minor base G (2/2); total (128/107) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 755,651 | 0 | G | C | 97.9%
| 527.7
/ NA
| 235 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (3/2); new base C (123/105); total (128/107) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 755,652 | 0 | C | G | 98.7%
| 540.4
/ NA
| 236 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (2/1); new base G (124/106); total (128/108) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 236 total aligned reads displayed.
CGCATATTCTGGTGCAGGAATATATCAAAGAGGCGCAAGGGTGCGATATCCGCTGTCTGGTTGTTGGCGATGAAGTGGTCGCTGCGATTGAACGGCGGGCGAAAGAGGGCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGAGCCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAATCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACAAGCCTGGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGATGACCTGGGGATGAGTTTTTTTGAATGTGAT > CP042583/755375‑755931
|||
gTGCAGGAATATATCAAAGAGGCGCAAGGGTGCGATATCCGCTGTCTGGTTGTTGGCGATGAAGTGGTCGCTGCGATTGAACGGCGGGCGAAAGAGGGCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGaaa > 1:113619/1‑289 (MQ=255)
gTGCAGGAATATATCAAAGAGGCGCAAGGGTGCGATATCCGCTGTCTGGTTGTTGGCGATGAAGTGGTCGCTGCGATTGAACGGCGGGCGAAAGAGGGCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGaaa > 1:701669/1‑289 (MQ=255)
tGCAGGAATATATCAAAGAGGCGCAAGGGTGCGATATCCGCTGTCTGGTTGTTGGCGATGAAGTGGTCGCTGCGATTGAACGGCGGGCGAAAGAGGGCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTggaagg‑aa < 2:1815576/282‑1 (MQ=255)
gAATATATCAAAGAGGCGCAAGGGTGCGATATCCGCTGTCTGGTTGTTGGCGATGAAGTGGTCGCTGCGATTGAACGGCGGGCGAAAGAGGGCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAacc > 1:1123951/1‑288 (MQ=255)
cAAAGAGGCGCAAGGGTGCGATATCCGCTGTCTGGTTGTTGGCGATGAAGTGGTCGCTGCGATTGAACGGCGGGCGAAAGAGGGCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCTCGAACGATGGCGCTGGACGTTGGTGGTGTGGTTATTCTGCCGGCTAATCCCGGGCCTATGGTTGT‑GGAAGTGAATGAGTGCCCGGGGCTGGCAGG‑AATAGGAAAAacagctgttgt > 2:486904/1‑279 (MQ=255)
aaGAGGCGCACGGGTGCGATATCCGCTGTCTGGTTGTTGGCGATGAAGTGGTCGCTGCGATTGAACGGCGGGCGAAAGAGGGCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCTCAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTCATCCCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGTGCTGGAAGG‑AATAGAAAAAACGACCGGTATCg > 1:1843381/1‑288 (MQ=255)
aaGAGGCGCAAGGGTGCGATATCCGCTGTCTGGTTGTTGGCGATGAAGTGGTCGCTGCGATTGAACGGCGGGCGAAAGAGGGCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCg > 1:1819645/1‑288 (MQ=255)
aaGAGGCGCAAGGGTGCGATATCCGCTGTCTGGTTGTTGGCGATGAAGTGGTCGCTGCGATTGAACGGCGGGCGAAAGAGGGCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCg > 1:1311951/1‑288 (MQ=255)
gggggaaGGTTGGGATGTCCGCTGTTTGGTTGTTGGCGATGAAGTGGTCGCTGCGATTGAACGGCGGGCGAAAGAGGGCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACAt < 2:536604/283‑1 (MQ=255)
cgcAAGGGTGCGATATCCGCTGTCTGGTTGTTGGCGATGAAGTGGTCGCTGCGATTGAACGGCGGGCGAAAGAGGGCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AAGAGAAAAAACCACCGGTATCGACATcgc > 1:1305067/1‑289 (MQ=255)
cAAGGGTGCGATATCCGCTGTCTGGTTGTTGGCGATGAAGTGGTCGCTGCGATTGAACGGCGGGCGAAAGAGGGCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCCGGAAGG‑AATAGAAAAAACCACCGGTATCGACAGCGCgg > 1:1482880/1‑289 (MQ=255)
ggTGCGATATCCGCTGTCTGGTTGTTGGCGATGAAGTGGTCGCTGCGATTGAACGGCGGGCGAAAGAGGGCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTa < 1:1652440/288‑1 (MQ=255)
gTGCGATATCCGCTGTCTGGTTGTTGGCGATGAAGTGGTCGCTGCGATTGAACGGCGGGCGAAAGAGGGCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTa < 1:378179/287‑1 (MQ=255)
tCCGGTGTGTGGGTGTTGGGGATGGAGTGGTCGCTGCGATTGAACGGGGGGCGAAAGAGGGCGATTTTCGTTCCACTTTGCATCGGGGCGGCGCGGCAAGCGGCGCCAGTAGCAAACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑g < 2:701669/289‑1 (MQ=255)
tCCGCTGTCTGGTTGTTGGCGATGAAGTGGTCGCTGCGATTGAACGGCGGGCGAAAGAGGGCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATcc > 1:274426/1‑288 (MQ=255)
tCCGCTGTCTGGTTGTTGGCGATGAAGTGGTCGCTGCGATTGAACGGCGGGCGAAAGAGGGCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGGTGGTGAT‑GGTGGTGAATGCGTCGCCGGGGCGGGAAGG‑AAGAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGacgc > 2:1383092/1‑285 (MQ=255)
cggggtgtggggtgttgGCGGTGAAGGGGTCGGTGCGATTGACCGGCGGGCGAAAGAGGGCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑g < 2:1311951/276‑1 (MQ=255)
ggTTGTTGGCGATGAAGTGGTCGCTGCGATTGAACGGCGGGCGAAAGAGGGCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGaa < 1:49515/289‑1 (MQ=255)
ggCGATGAAGTGGTCGCTGCGATTGAACGGCGGGCGAAAGAGGGCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGCAGCGTGAAATCGCGATAAAAGCCGCGCGAACGCTGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGGCGGCCGTTGGGGAT‑GGTGGTGAATGCGTCGCCGGGGCTTGAAGG‑AATAGATAAAACCACCGGTATCCAGCACTCGGGTAAAATGCTCC‑GCTGCATAGaccacccc > 2:1348352/1‑281 (MQ=255)
gtgatttgagtgCTGCGATTGGACGAGTGGCGAAAATGGGGGATTTTCTTTCCAAGTGGACTCGGGGCGGCTCGGCCAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATGGCGATAAAAGCCGCTCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTa < 2:981232/277‑1 (MQ=255)
gtGAAGGGGTCGCTGCGATTGGACGGCGGGCGAAAGGGGGCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTa < 2:1324366/287‑1 (MQ=255)
aGTGGTCGCTGCGATTGAACGGCGGGCGAAAGAGGGCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACa < 2:113619/289‑1 (MQ=255)
aGTGGTCGCTGCGATTGAACGGCGGGCGAAAGAGGGCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACa > 2:516164/1‑289 (MQ=255)
gTCGCTGCGATTGAACGGCGGGCGAAAGAGGGCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGCGGTGAATGCGTCGCCGGGGCTGGGAGG‑AATAGCAAAAACCACCGGTATCCACATCGCGGGTACACTGATCC‑GCTTGATCCAACGCCACGCTACGACAgcc > 2:705457/1‑286 (MQ=255)
gTCGCTGCGATTGAACGGCGGGCGAAAGAGGGCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAat > 1:301133/1‑289 (MQ=255)
tGCGATTGAACGGCGGGCGAAAGAGGGCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTACTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTg > 1:1626003/1‑288 (MQ=255)
cGATTGAACGGCGGGCGAAAGAGGGCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTgga > 1:987501/1‑205 (MQ=255)
ttGAACGGCGGGCGAAAGAGGGCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGaa < 1:786961/289‑1 (MQ=255)
cggcggGCGAAAGAGGGCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACgg > 1:1372215/1‑289 (MQ=255)
gggcgAAAGAGGGCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCTCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACCGAAATTTCCCTGAATACgggggg > 2:1469853/1‑289 (MQ=255)
gAAAGAGGGCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGGGAT‑GGAGGTGAATGCGGCGCCGGGGCTGGAAGG‑AATAGAAAAAAACACCGGTATCGACCTCGCGGGGAAAATGATTC‑GCCGGATCCAACGCCACGCTACGACCGAATATTGCCTGAAAACGGGGGGTTat > 2:128243/1‑288 (MQ=255)
aaaGAGGGCGATTTTCGTTCCAATGTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTag < 2:1220618/288‑2 (MQ=255)
gggCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGc < 1:516164/287‑1 (MQ=255)
ggCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACCGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCCCGGGTAAAATGATCC‑GCCGGATCGAACGCACCCCTACGCCCGAATATTGCCTGAAACCGGGCGCGTAGTCGCaa > 2:1510087/1‑288 (MQ=255)
gCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCa < 2:632540/244‑1 (MQ=255)
gCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAAt < 1:1224188/288‑1 (MQ=255)
gCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAAt < 1:455295/288‑1 (MQ=255)
gCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGGGGTTAGTCGCAATc > 1:1604823/1‑289 (MQ=255)
ccATTTTGCATCGGGCCGGCGCGCTAAGCCTCGCTCGTATCACACCACAGGAGCGGTAAATCGCGATAAAAGCCGCGCGAACGATGGCTCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGTGCTGGAAGG‑AATAGAAAAATCCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACTCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATc < 1:1404087/289‑1 (MQ=255)
caaaTTTGCATCGTGGCGGGGCGGCAAGCGTGGCCAGACTCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATc < 2:274426/287‑1 (MQ=255)
tGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCt > 1:527481/1‑288 (MQ=255)
tGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTAGACGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATAC‑GCTGGATCGAACGCAACGCTCGGAGCGAGTATACGCTAAAAAAGGGTGGTTAGTGGCAACCAAAGTACTGGTTAATGTTTTgtgcg > 2:920970/1‑285 (MQ=255)
ggcggggcggCAAGCGTCGCCAGTATCACACCACAGGAGCTGGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTg < 1:1864473/288‑1 (MQ=255)
cgcggcAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCttt > 1:612310/1‑289 (MQ=255)
aaGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑g < 1:1804489/288‑1 (MQ=255)
aaGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑g < 1:249878/288‑1 (MQ=255)
aGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTa > 1:329828/1‑289 (MQ=255)
acacCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCtt > 2:691846/1‑289 (MQ=255)
caGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGCTGGCGCTGGGCGTTGCTGGTCTGGATATTCTGCGTGCTAATCGCGGGCCGCTAGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑CATAGAAAAAACCACCGGTATCGACATCCCGGGTAAAATGATCC‑GCTGGCTCGAACGCCGTGCTACGACAGAAACTCTCCTGAACAGGGGTGGGTAGGGGCAAGATCATTACGGCTGCTTGTTTTGCCGGC‑CGTTTTGCAGTACGCTGGGCCGGTCtcttcacc > 2:776199/1‑285 (MQ=255)
caGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATc > 2:161571/1‑289 (MQ=255)
caGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACAGTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATc > 1:218116/1‑289 (MQ=255)
aGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCgg > 2:247747/1‑156 (MQ=255)
cGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAaga > 1:1077870/1‑289 (MQ=255)
tGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAgg > 1:625381/1‑289 (MQ=255)
ggaaataggaaTAAGAGCCGCGCGTACGATGGCGGTGGACAGTGCTGGTGGGGATATACTGCGTGCTGAGCGCGGGCCGTTGGTGAT‑GGAGGAGAATGGGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGATATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAgg < 2:1843381/279‑1 (MQ=255)
gAAATCGGGATAAAAGCGGCGCGAACGGTGGCGCTGGAGTGTGCGGGGGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAgg < 2:44747/288‑1 (MQ=255)
gAAATCGCGATAAAAGCCGGGGGAAGGATGGCGCTGGACGTTGGTGGGGTGGAAATTATGCGTGCTAATGGAGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAgg < 2:1155558/288‑1 (MQ=255)
gAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAgg < 1:156588/288‑1 (MQ=255)
tCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTATTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGt > 1:1761917/1‑288 (MQ=255)
cgcgATAAAAGCCGCGCTAACGATGGCGCTGGACGGTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTTGTGAT‑GGAGGTGAATGAGTCGCCGGTGCTGGAAGG‑AATAGAAAAAACCACCTGTATAGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGCAAGAGGTTGTAc < 1:179799/289‑1 (MQ=255)
gcgAACGATTGTGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACatcg < 1:1259477/289‑4 (MQ=255)
cgcTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCTGGTCGTTc < 1:114582/288‑1 (MQ=255)
gcTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCTGGTCGTTcc < 1:1067012/288‑1 (MQ=255)
gcTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCTGGTCGTTCCt < 1:691846/289‑1 (MQ=255)
tGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCTGGTCGTTCCTgg < 1:423603/289‑1 (MQ=255)
gcgtgggtgtgtgggATATTCTGCGGGGTAATGGGGGGCCGTTGGTGGT‑GGAGGTGAAGGCGTCGCCGGGGCTTGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCTGGTCGTTCCTGGTc < 2:1808855/275‑1 (MQ=255)
tGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCTGGTCGTTCCTGGTCTGGa < 1:950186/288‑1 (MQ=255)
gtgtGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTTAAGGCGTCGCCGGGGATGGAAGG‑AATAGAAAAAACCACCGTTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCTGGTCGTTCCTGGTCTGGa < 2:1740095/285‑1 (MQ=255)
gATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGTCGGTCTTTTTATCGAAAGAGTTTGTCCAAAATTATGACATCGTTGGTCGTTCCTTGTCTGGCTCCGCTGCGTc > 2:1187939/1‑289 (MQ=255)
gATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCTGGTCGTACCTGGTCTGGATACGCTGCGTc > 2:1450404/1‑289 (MQ=255)
atTCTGCGTGCTAATCGCGGGCGGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCTGGTCGTTCCTGGTCTGGATACGCTGCGTCAAt < 1:71995/289‑1 (MQ=255)
tCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTa > 2:126227/1‑222 (MQ=255)
tCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCTGGTCGTTCCTgg > 2:1216971/1‑267 (MQ=255)
tCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCTGGTCGTTCCTgg < 1:1216971/267‑1 (MQ=255)
tGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCTGGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGc > 2:61237/1‑288 (MQ=255)
gCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTACGCTGCGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATTACATCGCTTGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTc > 2:84762/1‑289 (MQ=255)
gCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCTGGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTc > 1:759776/1‑289 (MQ=255)
gCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCTGGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTc > 1:366410/1‑289 (MQ=255)
gTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCTGGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGa > 1:1676518/1‑289 (MQ=255)
gTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCTGGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGa > 2:465479/1‑289 (MQ=255)
tggtAAGCGCGGGCCGGTGGTGATGGGGGGGGAAGGCTTG‑GCGGGGCTGGAAGGAAATAG‑AAAAACCCCCGGTATCGACATCGCGGGTAAAATGGTCCGGCTGG‑TTGAAAGGCAACCTACGGAAGGATATTGCCTGAAAACGGGTGGTTAGGCCCAATCACATTACTGTTTATGGTTTTTCCTGGGGTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCTGGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGa < 2:251359/285‑1 (MQ=255)
tGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACGGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCTGGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGa < 2:1791305/288‑1 (MQ=255)
tGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGCTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAGTCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTTTTTTATTCGACAGAGGTTGTACTAAATTCTGAAATCCTTGGTGGTTCCTCGTCTGGCTCCGCTGGGTGATGGGCCCGAt > 2:1689636/1‑289 (MQ=255)
gCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCTGGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGATg > 1:232832/1‑289 (MQ=255)
ggaaTAGCGGGGCGTTGGTGAT‑GGAGGTGGATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCTGGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGATg < 2:1074747/286‑1 (MQ=255)
tAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCTGGTCGTTCCTgg > 2:1366766/1‑258 (MQ=255)
tAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCTGGTCGTTCCTgg < 1:1366766/258‑1 (MQ=255)
tAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCTGGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGATGAc < 1:128243/289‑1 (MQ=255)
tCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCTGGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGATGACCTg > 2:280919/1‑289 (MQ=255)
gggCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCTGGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTGTATGACCTGGGGa > 1:1047763/1‑289 (MQ=255)
ggCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCTGGTCGTTc > 2:1139827/1‑246 (MQ=255)
ggCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCTGGTCGTTCCTgg > 2:644688/1‑250 (MQ=255)
ggCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCTGGTCGTTCCTgg < 1:644688/250‑1 (MQ=255)
ggCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCTGGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGATGACCTGGGGAt > 1:852317/1‑289 (MQ=255)
ttagTGAT‑GGAGGTGAATGCGTGGCCGGGGCGAGAAGG‑AATAGAAAAGGCCACCGGTATCGACATCGCGGGTAAAAGGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTAGCGAAAGAGGTTGTACAAAATTATGACATCGCTGGTCATTCCTGGTCTGGATACGCTGCGTCAATGGCTCGATGACCTGGGGATGAGt < 2:1058288/285‑1 (MQ=255)
gggAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCTGGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGATGACCTGGGGATGAGTTTTTTTg < 1:1510087/287‑1 (MQ=255)
ggTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAgg > 2:816519/1‑199 (MQ=255)
ggTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCTGGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGATGACCTGGGGATGAGTTTTTTTGAAtg < 1:920970/288‑1 (MQ=255)
tGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTAt > 1:346064/1‑211 (MQ=255)
tGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTAt < 2:346064/211‑1 (MQ=255)
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CGCATATTCTGGTGCAGGAATATATCAAAGAGGCGCAAGGGTGCGATATCCGCTGTCTGGTTGTTGGCGATGAAGTGGTCGCTGCGATTGAACGGCGGGCGAAAGAGGGCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGAGCCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAATCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGC‑GTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACAAGCCTGGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGATGACCTGGGGATGAGTTTTTTTGAATGTGAT > CP042583/755375‑755931
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
