Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F210 I1 R1
|
4930 |
262.8 |
3829204 |
96.6% |
3699011 |
272.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
755,857 |
3 bp→TCG |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 755,857 | 0 | A | T | 99.6%
| 525.2
/ NA
| 227 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base T (122/102); total (123/104) |
| Fisher's exact test for biased strand distribution p-value = 4.58e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 |
| * | CP042583 | 755,858 | 0 | G | C | 99.6%
| 526.2
/ NA
| 227 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base C (122/104); total (123/104) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 755,859 | 0 | C | G | 98.7%
| 519.4
/ NA
| 227 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (3/0); new base G (119/103); total (123/104) |
| Fisher's exact test for biased strand distribution p-value = 2.52e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 227 total aligned reads displayed.
CGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGAGCCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAATCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACAAGCCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGTTTTCTGCCATGGCGGAAGTCCGACCTAGTGCCGTATTGCCGCTGGCGGCGGATTTATCTGCCATCAATGCCAGTAGCCTGACCGTGAAAGCATTTCTTGATATGCAGGATGATAAT > CP042583/755582‑756135
|||
gcTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTcc < 1:1067012/288‑1 (MQ=255)
cTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCt < 1:1265825/288‑1 (MQ=255)
tGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCCCATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTTTCGAAAGAGGTTGTACAAAATTAGGACCTCTCT‑GGTTGTTCCttg > 2:1229496/1‑287 (MQ=255)
tGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTgg < 1:423603/289‑1 (MQ=255)
tGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGGTGTACAAAATTATGACATCGCT‑GGTCGTTCCTgg > 1:669570/1‑289 (MQ=255)
ggAGGTTGCTGGTGTGGAGATTCTGGGGGCGAATGGCGGGCCGTTGGTGAA‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑ACTAGAGAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTgg < 2:1368888/288‑1 (MQ=255)
gcgtgggtgtgtgggATATTCTGCGGGGTAATGGGGGGCCGTTGGTGGT‑GGAGGTGAAGGCGTCGCCGGGGCTTGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTc < 2:1808855/275‑1 (MQ=255)
tGGTTTGCATATTCTGCTGGCTAATCGCGGGCCGTTGTTGAT‑GGAGGTGAATGCGTCGCCGGAGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGACGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACg < 1:96464/289‑1 (MQ=255)
tgtgGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCt < 1:275941/288‑1 (MQ=255)
gATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTc > 1:165172/1‑289 (MQ=255)
gATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAC‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑ACTAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCCCATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATTGACCGAGGTTGTAAAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTTGATCCTCTGCGt > 1:1484680/1‑288 (MQ=255)
tCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTgg < 1:1216971/267‑1 (MQ=255)
tGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGc > 2:61237/1‑288 (MQ=255)
gTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATGCGCTGCGTCATTGGCTCGa > 2:1458163/1‑289 (MQ=255)
gTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGa > 1:1676518/1‑289 (MQ=255)
gTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AACAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATAACACGGCT‑GGTCTTTCCTGGTCTGGATACGCTGCGTCAATGGCTc > 2:1219018/1‑287 (MQ=255)
tggtAAGCGCGGGCCGGTGGTGATGGGGGGGGAAGGCTTG‑GCGGGGCTGGAAGGAAATAG‑AAAAACCCCCGGTATCGACATCGCGGGTAAAATGGTCCGGCTGG‑TTGAAAGGCAACCTACGGAAGGATATTGCCTGAAAACGGGTGGTTAGGCCCAATCACATTACTGTTTATGGTTTTTCCTGGGGTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGa < 2:251359/285‑1 (MQ=255)
tGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGCTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAGTCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTTTTTTATTCGACAGAGGTTGTACTAAATTCTGAAATCCTT‑GGTGGTTCCTCGTCTGGCTCCGCTGGGTGATGGGCCCGAt > 2:1689636/1‑289 (MQ=255)
gCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑g > 1:232832/1‑289 (MQ=255)
ggaaTAGCGGGGCGTTGGTGAT‑GGAGGTGGATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑g < 2:1074747/286‑1 (MQ=255)
tCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTg > 2:280919/1‑289 (MQ=255)
ggCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTc < 1:1139827/246‑1 (MQ=255)
ggCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTc > 2:1139827/1‑246 (MQ=255)
ggCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTgg < 1:644688/250‑1 (MQ=255)
ggCCGTTGGTGAT‑GGAGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGAt > 1:852317/1‑289 (MQ=255)
aGGTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑TAAtg > 1:333022/1‑289 (MQ=255)
ggTGAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAAtg < 1:920970/288‑1 (MQ=255)
gAATGCGTCGCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGGGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCGGGACACGCTGCGTCCATGGCCCGAT‑GACCTGGGGATGAGCTTTTTT‑GAAtggtat > 2:1303163/1‑285 (MQ=255)
aatcggtgCCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGAt < 2:74414/281‑1 (MQ=255)
atgcgtcgccGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATaa < 1:1640245/281‑1 (MQ=255)
tgcgtcgccGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGGTTTTTT‑GAATG‑TGATa > 1:223513/8‑287 (MQ=255)
cgccGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTCCTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAACGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGGCAATGGCCCGCG‑GACCCGGGTATGGGTTTTTTT‑GAAtggtgtacctggca > 2:383971/3‑277 (MQ=255)
cgccGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GATCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCa < 2:419241/287‑1 (MQ=255)
cgccGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATAATGGTTTTGCCTGCGCGTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGCTGTATAAAATTATGACATCGCT‑GGTCGTTCCGGGTCTGGATACGCTGCTGCAATGGCTCGAT‑GCACCGGCGATGAGTTTTGTT‑GAGTT‑GGATAACGGTCa > 2:6298/3‑289 (MQ=255)
ggCTGGGATA‑AATAGAAAAAGACGCCGGTATGGGAATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGTGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACAGCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGctc < 2:1403187/288‑1 (MQ=255)
gaagg‑aaTAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTTCGGCTCTGCa > 2:92740/1‑287 (MQ=255)
aaTAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGcc > 1:563268/1‑288 (MQ=255)
aTAGACAAAACCACCGGTATCGACATCGCTGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGcccc < 1:504400/289‑1 (MQ=255)
accaccGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑Ga < 2:1529030/248‑1 (MQ=255)
accaccGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGa > 1:1513442/1‑289 (MQ=255)
cGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTc < 2:310688/289‑1 (MQ=255)
tttCGACATCGAGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGa < 2:1123951/286‑1 (MQ=255)
aTCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACg < 2:329828/289‑1 (MQ=255)
aTCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACg < 2:366410/289‑1 (MQ=255)
cGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGgt < 2:1618929/289‑1 (MQ=255)
cgcgGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGATGTTGTACAAAATTATGACATCCCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTTAGAGGG‑TG‑TAACTGTCAGGATTGTCTCCGGCCCCATATGCCAAATTTCGACgtggcattg > 2:1888375/1‑281 (MQ=255)
cgcgGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGAGGAGTTTTTTT‑GAATG‑TGATAACTTTCAGGTTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGGCttt > 2:150146/1‑289 (MQ=255)
cgcgGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCGCGAT‑TACCTGGGGATGAGTCTGTTT‑GAATG‑TGATAACTGTTAGGCTCCGCATCTGCCTCATTTGCATACtttggcagtggtcctt > 2:1554772/1‑276 (MQ=255)
tAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGc < 1:480591/288‑1 (MQ=255)
c‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATc < 1:465479/289‑1 (MQ=255)
gtaTCGAACGCCACGCTACGACAGAATATTGACTTAAAACGGGTGGTTAGTCGCAATCACATTACTGATCCTGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGAt < 1:978199/287‑1 (MQ=255)
ggATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCAAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGAt < 2:232832/289‑1 (MQ=255)
gATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGa > 1:1736558/1‑186 (MQ=255)
gATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGa < 2:1736558/186‑1 (MQ=255)
gATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATc > 1:1195395/1‑289 (MQ=255)
gATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATc > 1:1551476/1‑289 (MQ=255)
tCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGa < 2:527481/289‑1 (MQ=255)
aaCGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑CGATCGATaa > 2:969421/1‑289 (MQ=255)
aaCGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGATGTCTTTGATGCCAAAATCGATC‑TGATCGATa > 1:600170/1‑288 (MQ=255)
aaCGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCGGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCAAAAATCCATC‑TGCTCGATa > 1:1158187/1‑288 (MQ=255)
cGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGAt > 1:738522/1‑288 (MQ=255)
cGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGAt > 2:1742690/1‑288 (MQ=255)
cGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATc < 1:1322724/289‑1 (MQ=255)
cGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGtt < 1:1463064/289‑1 (MQ=255)
cAGAATATTGCCTGAAAACGGGTCGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑Tg > 1:1743734/1‑266 (MQ=255)
aaTATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGTTTTCTg > 1:352250/1‑288 (MQ=255)
cggAAAACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATGATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGTTTTCTGCCATGGCg < 1:705457/286‑1 (MQ=255)
gCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGTTTTCTGCCATGGCGGAAGTCCGACCTTCAGCCGTa > 1:1035081/1‑289 (MQ=255)
aTCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGTTTTCTGCCATGGCGGAAGTCCGACCTTCAGCCGTAtt > 2:88821/1‑288 (MQ=255)
aTCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGTTTTCTGCCATGGCGGAAGTCCGACCTTCAGCCGTAtt > 1:949833/1‑288 (MQ=255)
aTTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTgggg < 1:410617/137‑1 (MQ=255)
cTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGTTTTCTGCCATGGCGGAAGTCCGACCTTCAGCCGTATTGCCGCTggcg < 2:1379322/289‑1 (MQ=255)
cTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGTTTTCTGCCATGGCGGAAGCCCGACCTTCAGCCGTATTGCCCGTggcg > 2:1338859/1‑289 (MQ=255)
cTGATCATGGTTTTGCCTGAGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGTTTTCTGCCATGGCGGAAGTCCGACCTTCAGCCGTATTGCCGCTggcg < 1:1348352/289‑1 (MQ=255)
aTCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TTATCGATAACACGCTCCTCTTTTCTCCCCTGGCGGAGATGCGAACCTCAGCCTAATTGCCTCTggcggcc > 2:1210273/1‑288 (MQ=255)
aTCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGTTTTCTGCCATGGCGGAAGTCCGACCTTCAGCCGTATTGCCGCTGgcggcg > 1:1312966/1‑289 (MQ=255)
tCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGTTTTCTGCCATGGCGGAAGTCCGACCTTCAGCCGTATTGCCGCTGGcggcgg > 2:463626/1‑289 (MQ=255)
cATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGTTTTCTGCCATGGCGGAAGTCCGACCTTCAGCCGTATTGCCGCTGGCGGCGGa > 2:1781026/1‑289 (MQ=255)
aTGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGTTTTCTGCCATGGCGGAAGTCCGACCTTCAGCCGTATTGCCGCTGGCGGCGGAt > 1:1364599/1‑289 (MQ=255)
aTGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGTTTTCTGCCATGGCGGAAGTCCGACCTTCAGCCGTATTGCCGCTGGCGGCGGAt > 2:584149/1‑289 (MQ=255)
aTGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGTTTTCTGCCATGGCGGAAGTCCGACCTTCAGCCGTATTGCCGCTGGCGGCGGAt > 1:143053/1‑289 (MQ=255)
tggttGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGTTTTCTGCCATGGCGGAAGTCCGACCTTCAGCCGTATTGCCGCTGGCGGCGGATTTATCTg < 2:669570/285‑1 (MQ=255)
tGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGTTTTCTGCCATGGCGGAAGTCCGACCTTCAGCCGTATTGCCGCTGGCGGCGGATTTATCt > 1:1589293/1‑288 (MQ=255)
tGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGTTTTCTGCCATGGCGGAAGTCCGACCTTCAGCCGTATTGCCGCTGGCGGCGGATTTATCt > 1:1575201/1‑288 (MQ=255)
tGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGTTTTCTGCCATGGCGGAAGTCCGACCTTCAGCCGTATTGCCGCTGGCGGCGGATTTATCt > 1:207092/1‑288 (MQ=255)
tGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGTTTTCTGCCATGGCGGAAGTCCGACCTTCAGCCGTATTGCCGCTGGCGGCGGATTTATCt > 1:190411/1‑288 (MQ=255)
ccTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGTTTTCTGCCATGGCGGAAGTCCGACCTTCAGCCGTATTGCCGCTGGCGGCGGATTTATCTGc > 2:590056/1‑288 (MQ=255)
gcgcTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGTTTTCTGCCATGGCGGAAGTCCGACCTTCAGCCGTATTGCCGCTGGCGGCGGATTTATCTGCCATc < 2:1195395/289‑1 (MQ=255)
cgcTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGTTTTCTGCCATGGCGGAAGTCCg > 1:1371666/1‑245 (MQ=255)
aGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTATTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGTTTTCTTCCATGGCGGAAGTCCGACCTTCAGCCGTATTGCCGATGGCGTCGGATTTATCTGCCAACAATGCCCGttc > 2:1650316/1‑284 (MQ=255)
gCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAGCTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGTTTTCTGCCATGGCGGAAGTCCGACCTTCAGCCGTATTGCCGCTGGCGGCGGATTTATCTGCCATCAATGCCAGTTCGCTGACCGt < 2:215592/289‑1 (MQ=255)
gCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTG‑CCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGTTTTCTGCCATGGCGGAAGTCCGACCTTCAGCCGTATTGCCGCTGGCGGCGGATTTATCTGCCATCAATGCCAGTTCGCTGACCGTg > 1:1839153/1‑289 (MQ=255)
cGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGTTTTCTGCCATGGCGGAAGTCCGACCTTCAGCCGTATTGCCGCTGGCGGCGGATTTATCTGCCATCAATGCCAGTTCGCTGACCGTGa < 2:136451/289‑1 (MQ=255)
tCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGTTTTCTGCCATGGCGGAAGTCCGACCTTCAGCCGTATTGCCGCTGGCGGCGGATTTATCTg > 1:745700/1‑259 (MQ=255)
agagGTTGTA‑AAAATTTAGACCACTCTGGGTCGTTCCTGTTCTGG‑TTCGGTGGGGTAAATGCTTGATGGACCT‑GGGATGGATTTTTTT‑GAAAGTTGATACCTTCAAGGTTTGGCATTTGCCCCTAATGAGAAATTTGGACGTTGT‑TTTGATGGCCAAATTGGTCTTGTTGAAAAACCCGTTCC‑GTTTTCTGCCATGGCGGAAGTCCGACCTTCAGCCGTATTGCCGCTGGCGGCGGATTTATCTGCCATCAATGCCAGTTCGCTGACCGTGAAAGCATTTCTTGATATg < 2:775076/289‑1 (MQ=255)
ggTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGTTTTCTGCCATGGCGGAAGTCCGACCTTCAGCCGTATTGCCGCTGGCGGCGGATTTATCTGCCATCAATGCCAGTTCGCTGACCGTGAAAGCATTTCTTGATATg < 1:859295/287‑1 (MQ=255)
ggTTGTACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGTTTTCTGCCATGGCGGAAGTCCGACCTTCAGCCGTATTGCCGCTGGCGGCGGATTTATCTGCCATCAATGCCAGTTCGCTGACCGTGAAAGCATTTCTTGATATGc < 2:468210/288‑1 (MQ=255)
tACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGCTCCTGTTTTCTGCCATGGCGGAAGTCCGACCTTCAGCCGTATTGCCGCTGGCGGCGGATTTATCTGCCATCAATGCCAGTTCGCTGACCGTGAAAGCATTTCTTGATATGCAGgatg > 2:1871627/1‑289 (MQ=255)
tACAAAATTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGTTTTCTGCCATGGCGGAAGTCCGACCTTCAGCCGTATTGCCGCTGGCGGCGGATTTATCTGCCCTCAATGCCAGTTCGCTGACCTTGAACGCATTTCTTGATATTCTGgatg > 2:1000115/1‑289 (MQ=255)
aaTTATGACATCGCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGTTTTCTGCCATGGCGGAAGTCCGACCTTCAGCCGTATTGCCGCTGGCGGCGGATTTATCTGCCATCAATGCCAGTTCGCTGACCGTGAAAGCATTTCTTGATATGCAGGATGATAAt < 1:380678/289‑1 (MQ=255)
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CGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGAT‑GGAGGTGAATGCGAGCCCGGGGCTGGAAGG‑AATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCC‑GCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAATCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACAAGCCT‑GGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGAT‑GACCTGGGGATGAGTTTTTTT‑GAATG‑TGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATC‑TGATCGATAACACGATCCTGTTTTCTGCCATGGCGGAAGTCCGACCTAGTGCCGTATTGCCGCTGGCGGCGGATTTATCTGCCATCAATGCCAGTAGCCTGACCGTGAAAGCATTTCTTGATATGCAGGATGATAAT > CP042583/755582‑756135
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
