Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F210 I1 R1
|
4930 |
262.8 |
3829204 |
96.6% |
3699011 |
272.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
780,279 |
3 bp→TCA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 780,279 | 0 | A | T | 99.6%
| 614.6
/ NA
| 259 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (148/109); minor base C (1/0); total (150/109) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 |
| * | CP042583 | 780,280 | 0 | G | C | 99.6%
| 609.5
/ NA
| 259 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (149/109); minor base A (1/0); total (150/109) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 |
| * | CP042583 | 780,281 | 0 | T | A | 98.5%
| 603.3
/ NA
| 259 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (1/0); major base A (146/108); minor base C (3/1); total (150/109) |
| Fisher's exact test for biased strand distribution p-value = 6.40e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 259 total aligned reads displayed.
ATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCAGCTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTAGTGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACAGCGGTGAGTTGCTTAGCTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCAGCCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGTACCGAAGATAGCCGACGCATATCCTTTCACATTCGTTTTAACCGTCCGAGTAGCCTGTTTGCACGCTGCTGGTTGCTGGTGGAAGGGGAAACGGAAACCTGGGTTATCAATGAACTGGCGCGT > CP042583/780000‑780560
|||
tGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGCAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTg > 1:1020540/1‑289 (MQ=255)
aCAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCa < 1:1749182/288‑1 (MQ=255)
aCAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCAt < 1:1355246/289‑1 (MQ=255)
ctgctTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGc > 2:609930/1‑283 (MQ=255)
gctTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGCTCGAAGATCCAGAAACCAGTGTACACCCCATTATAC‑TAGCAGTTGCGTGGCATCT‑GTTg > 2:76085/1‑289 (MQ=255)
gctTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACAACCCCATATGC‑GTTCAGTGTCCTGGCATCC‑GTTg > 2:709788/1‑289 (MQ=255)
ctTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGa > 1:1035069/1‑289 (MQ=255)
ctTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGa > 1:298910/1‑289 (MQ=255)
ctTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGa > 1:1270302/1‑289 (MQ=255)
ttGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGaa > 1:1081104/1‑289 (MQ=255)
ttGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGAGGATT‑AACGACCTGGTGGGCCCCCGTAACGGGTTTTTTTTCTCGGCCTATTTGCTTCTTTTGTGCCGGCAAAAGGGCAC‑TTTCGACTGGGTT‑AAAGA‑GCCCGGTCATTTTTGC‑TGATCGAAAATCCAGAAAACCGTTTACACCCCATTATTC‑TTTCAGTTTCCTGGCCTTT‑GTTGaaa > 2:960610/1‑288 (MQ=255)
tGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TTATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTTCCTGGCATCT‑GTTGat > 2:1141976/1‑287 (MQ=255)
tttttCTCGGGGGAGTGTGCCGGACAGGCTCGATATCGTGTATGGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGc < 2:293446/287‑1 (MQ=255)
tattTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTg > 1:1665800/1‑288 (MQ=255)
tGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAg < 1:1413012/289‑1 (MQ=255)
aGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGCT‑AACGACGCCCGTCCATTGTTGC‑CGATCGAAGATCCAGAAACCCGGTTACACCCCCTCATGCTTTCATGTT‑CCTGG‑ACCTCGTTGAATCTTTTCCCCTTGCAgc > 2:1165742/1‑288 (MQ=255)
aGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAgc > 2:182242/1‑288 (MQ=255)
aGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCACCTTATGC‑TTTCAGTTTCCTGGCATCT‑GTTGACTCTTCTGCCATTGCAgc > 2:948999/1‑288 (MQ=255)
cgggggCGGGACAGGCGGGATATGGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCa < 2:1579270/287‑1 (MQ=255)
ggggCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCAtt > 1:202786/1‑288 (MQ=255)
ggCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGc < 1:508516/288‑1 (MQ=255)
cGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGACGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTAGTTTGCTCGGCCCACTTGCTACTTTGTTGCAGGCAAAA‑GGCCCATTGCGACC‑GGAT‑CAAGACGCCCGTCCATTGTTGC‑TGCTCGAAGATCGAGAAACCCGTTTACACCCCACTCTGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTCCCCTTGCAGCGCATTGccac > 2:1834791/1‑288 (MQ=255)
cGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATCTCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTACTTGCTACTCTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTTC‑TGATCGAAGATCCAGAAATCCGTTTACACCCCATTATCA‑TTTCAGTTGCCTGTCACTG‑GTTGAATCTTACGTCTGTGCAGCCCATTGccac > 2:852302/1‑288 (MQ=255)
aGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCGGTTTACACCCAATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCCTTGCAGCGCATTGccagccccc > 2:473677/1‑282 (MQ=255)
aGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGccaccacca > 1:438857/1‑288 (MQ=255)
gcgcGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCAATTGTTGC‑CGATCGAAGATCCAGAAACCCGGTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCCTTGCAGTCAATTGTCACCACCAAc > 2:421607/1‑288 (MQ=255)
tatCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCCGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGATAAAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGCAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCCTCT‑GGTTAATCCTCTGCCCTTGCAGCCCATTGCCACCACCAActcgggt > 2:23153/1‑283 (MQ=255)
tGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTTCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTgcttt > 2:901114/1‑287 (MQ=255)
ggcggcgAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTgctttcgtt < 2:751611/289‑6 (MQ=255)
cggcgAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACG‑CCGTCCATTGTTTCTTGTTCGACGA‑CCAGAAACCCCTTTACCACCCAATATGC‑GTTCCCTTTCCTGGCACCT‑GTTCAAACTTTCTCACCTGCAGCGCCTTTCCACCCCCCACCCGGGTGAGtgtcttttgttca > 2:1728758/1‑276 (MQ=255)
cAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCgg < 1:1775454/287‑1 (MQ=255)
gCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTaga > 2:300543/1‑289 (MQ=255)
cGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGcc < 1:955909/289‑1 (MQ=255)
aGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCCCCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGAc < 1:421756/289‑1 (MQ=255)
tGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTg < 1:1838640/288‑1 (MQ=255)
tCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAg < 1:696115/289‑1 (MQ=255)
gATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTcc > 1:1585681/1‑288 (MQ=255)
atatCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTcct > 2:1245459/1‑287 (MQ=255)
tcatcaACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGccacc < 1:560991/218‑1 (MQ=255)
tcatcaACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTcctcgcg < 1:282606/289‑6 (MQ=255)
atcaACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAgcgc > 2:653615/1‑207 (MQ=255)
atcaACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAgcgc < 1:653615/207‑1 (MQ=255)
atcaACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAg < 2:793378/231‑1 (MQ=255)
atcaACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGc < 2:83977/264‑1 (MQ=255)
atcaACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTcctcgcgcg > 2:256228/1‑282 (MQ=255)
atcaACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTcctcgcgcg > 1:804093/1‑282 (MQ=255)
atcaACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTcctcgcgcg > 1:784379/1‑282 (MQ=255)
atcaACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTcctccctcg > 2:386953/1‑282 (MQ=255)
aCCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTg > 1:40137/1‑288 (MQ=255)
aCCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTg > 2:1343094/1‑288 (MQ=255)
aCCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACCCGGGTGCGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTg > 2:179894/1‑288 (MQ=255)
ggATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTgccgc < 1:1437020/289‑1 (MQ=255)
ggATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTCCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTgccgc < 1:1886261/289‑1 (MQ=255)
tgatTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTg < 1:1827490/289‑1 (MQ=255)
tgatTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTg < 1:1245459/289‑1 (MQ=255)
gatTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTg < 2:1665800/288‑1 (MQ=255)
gtggGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACTCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGa < 2:19314/288‑1 (MQ=255)
tggGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGt > 1:1910568/1‑289 (MQ=255)
gggcgctcgtATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGt < 2:1910568/279‑1 (MQ=255)
gctcgtATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCtt < 2:1081104/284‑1 (MQ=255)
ctcgtATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCtt < 1:1293747/284‑1 (MQ=255)
tcgtATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGa < 2:727104/286‑1 (MQ=255)
gcgtATCGGGTTATTTTGCTCGGCCTATTTGCTACTTGGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGa < 2:583885/286‑1 (MQ=255)
gtATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGt > 1:1737523/2‑289 (MQ=255)
tATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCCCGTTGCCGCCTGGCGTCCGGGTCCGCGTGGCTGGAGt > 2:352355/1‑288 (MQ=255)
aTCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGTa < 2:174496/288‑1 (MQ=255)
tATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGTACCGAAGa < 1:300543/288‑1 (MQ=255)
aTTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGTACCGAAGAtc > 1:148082/1‑288 (MQ=255)
aTTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGTACCGAAGATa > 1:1094495/1‑289 (MQ=255)
tttGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGTACCGAAGATAGc < 1:1115100/289‑1 (MQ=255)
ttGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGTACCGAAGATAGcc < 2:931051/289‑1 (MQ=255)
cTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTTGTATGAGTCCCGAAGCTAGCCGAc > 2:1420978/1‑289 (MQ=255)
tCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGTACCGAAGATAGCCGAc > 1:220658/1‑288 (MQ=255)
ggCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGTACCGAAGATAGCCGACGCa < 1:177252/289‑1 (MQ=255)
ggCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGTACCGAAGATAGCCGACGCa < 1:377296/289‑1 (MQ=255)
ggCCTATTTGCTACTTTGTTGAAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTGTC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGTACCGAAGATAGCCGACGCa < 2:1318387/289‑1 (MQ=255)
cTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGTACCGAAGATAGCCGACGCata < 1:1844877/288‑1 (MQ=255)
cTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGTACCGAAGATAGCCGACGCATATCCTTTc > 2:1786113/1‑288 (MQ=255)
aaaa‑GGCACATTGCGACT‑GTAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGTACCGAAGATAGCCGACGCATATCCTTTCACATTCGTTTTAACCg < 1:1500023/288‑1 (MQ=255)
ttGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGTACCGAAGATAGCCGACGCATATCCTTTCACATTCGTTTTAACCGTCCgtcatcgc < 1:333330/289‑8 (MQ=255)
aaGACGCCCGTCCATTTTTGG‑TGTCTGAAGACCCACAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGTGTCTGGGGCCGAGTGGCTTGAGTACCGAAGATAGCCGACGCATATCCTTTCACATTCGTTTTAACCGTCCGTCATCGCTGTTTGCACgctg < 2:1112236/289‑1 (MQ=255)
ggccgttCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACCCCCCGTTATGC‑TTTCAGTTGCCGGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGTACCGAAGATAGCCGACGCATATCCTTTCACATTCGTTTTAACCGTCCGTCATCGCTGTTTGCACGCtgctgg < 2:1442075/283‑1 (MQ=255)
cccGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGTACCGAAGATAGCCGACGCATATCCTTTCACATTCGTTTTAACCGTCCGTCATCGCTGTTTGCACGCtgctggtt > 1:1159463/1‑289 (MQ=255)
cccGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGTACCGAAGATAGCCGACGCATATCCTTTCACATTCGTTTTAACCGTCCGTCATCGCTGTTTGCACGCtgctggtt > 2:787909/1‑289 (MQ=255)
cccGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGGGGCTTGAGTACCGAAGGTAGCCGACGCATATCCTTTCCCCTTCGTTTTTACCGTCCGTCACTCCTGTTTGCCCGCtgctgggt > 2:1865584/1‑287 (MQ=255)
ccGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGTACCGAAGATAGCCGACGCATATCCTTTCACATTCGTTTTAACCGTCCGTCATCGCTGTTTGCACGCtgctggtt > 2:1697539/1‑288 (MQ=255)
tgttgC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGTACCGAAGATAGCCGACGCATATCCTTTCACATTCGTTTTAACCGTCCGTCATCGCTGTTTGCACGCTGCTGGTTGCTGGTGGa > 2:525936/1‑289 (MQ=255)
c‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGTACCGAAGATAGCCGACGCATATCCTTTCACATTCGTTTTAACCGTCCGTCATCGCTGTTTGCACGCTGCTGGTTGCTGGTGGAAgggg > 1:1801840/1‑289 (MQ=255)
tCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGTACCGAAGATAGCCGACGCATATCCTTTCACATTCGTTTTAACCGTCCGTCATCGCTGTTTGCACGCTGCTGGTTGCTGGTGGAAGGggaaac < 1:251636/289‑1 (MQ=255)
cGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGTACCGAAGATAGCCGACGCATATCCTTTCACATTCGTTTTAACCGTCCGTCATCGCTGTTTGCACGCTGCTGGTTGCTGGTGGAAGGggaaacg > 1:477499/1‑289 (MQ=255)
tCCAGGAACCCATTTGCACCCCGTGATGC‑TTTCACTTGCCTGGCATCT‑GTTGAATCTTCTGCCATGGCAGCGCATTGCCACCACCAACTCGGGTGGGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTGCTCGCGCGTTGCCGCCTGGCGTCGGGGGCCGAGTGGCTTGAGTACCGAAGATAGCCGACGCATATCCTTTCACATTCGTTTTAACCGGCCGTCATCGCTGTTTGCACGCTGCTGGTTGCTGGTGGAAGGGGAAACGGAAAcc < 2:1491208/289‑1 (MQ=255)
tCCAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGTACCGAAGATAGCCGACGCATATCCTTTCACATTCGTTTTAACCGTCCGTCATCGCTGTTTGCACGCTGCTGGTTGCTGGTGGAAGGGGAAACGGAAAcc < 1:930871/289‑1 (MQ=255)
cAGAAACCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTgct > 1:257748/1‑100 (MQ=255)
aaaCCCGTTTACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGTACCGAAGATAGCCGACGCCTATCCTTTCACACTCGTTTTAACCGTCCGTCATCGCTGTTTGCACGCTGCTGGTTGCTGGTGGAAGGGGAAACGGAAACCTGGGt > 1:1560577/1‑289 (MQ=255)
aaaCCCGTTGACCACCCTTTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCCACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGTACCGAAGATAGCCGACGCATATCCTTTCACATTCGTTTTAACCGTCCGTCATCGCTGTTTGCACGCTGCTGGTTGCTGGTGGAAGGGGAAACGGAAACCTGGGt < 2:1159463/289‑1 (MQ=255)
tttACACCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGCGTGGCTTGAGTAACGAAGATAGCCGACGCATATCCTTTCACATTCGGTTTAACCGTCCGTCATCGCTGTTTGCACGCTGCTGGTTGCTGGTGGCAGGGGAAACGGACACCTGGGTTATCAAt > 1:1195992/1‑289 (MQ=255)
cacCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGTACCGAAGATAGCCGACGCATATCCTTTCACATTCGTTTTAACCGTCCGTCATCGCTGTTTGCACGCTGCTGGTTGCTGGTGGAAGGGGAAACGGAAACCTGGGTTATCAATGAAc < 2:440527/289‑1 (MQ=255)
acCCCATTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGTACCGAAGATAGCCGACGCATATCCTTTCACATTCGTTTTAACCGTCCGTCATCGCTGTTTGCACGCTGCTGGTTGCTGGTGGAAGGGGAAACGGAAACCTGGGTTATCAATGa > 1:1296583/1‑286 (MQ=255)
aTTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGTACCGAAGATAGCCGACGCATATCCTTTCACATTCGTTTTAACCGTCCGTCATCGCTGTTTGCACGCTGCTGGTTGCTGGTGGAAGGGGAAACGGAAACCTGGGTTATCAATGAACTggacg > 1:814345/1‑286 (MQ=255)
aTTATGC‑TTTCAGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGTACCGAAGATAGCCGACGCATATCCTTTCACATTCGTTTTAACCGTCCGTCATCGCTGTTTGCACGCTGCTGGTTGCTGGTGGAAGGGGAAACGGAAACCTGGGTTATCAATGAACTGgcgc > 1:750399/1‑289 (MQ=255)
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ATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCAGCTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAA‑GGCACATTGCGACT‑GGAT‑AAAGACGCCCGTCCATTGTTGC‑TGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGC‑TTAGTGTTGCCTGGCATCT‑GTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACAGCGGTGAGTTGCTTAGCTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCAGCCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGTACCGAAGATAGCCGACGCATATCCTTTCACATTCGTTTTAACCGTCCGAGTAGCCTGTTTGCACGCTGCTGGTTGCTGGTGGAAGGGGAAACGGAAACCTGGGTTATCAATGAACTGGCGCGT > CP042583/780000‑780560
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
