Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 798,245 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583798,2450AT99.6% 584.0 / NA 249intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (137/110);  minor base C (1/0);  total (138/111)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01
*CP042583798,2460GC99.6% 575.4 / NA 249intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (137/109);  total (138/111)
Fisher's exact test for biased strand distribution p-value = 4.45e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583798,2470CG99.6% 578.1 / NA 249intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base G (137/110);  total (138/111)
Fisher's exact test for biased strand distribution p-value = 4.48e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 249 total aligned reads displayed.

GTGCGGCGGAAGAAAAAGCCCGTGAAGCCCAGCGCAATCAGTACGATTCTGGCGATCAGTACAACGATGATGAAATCGATGCGATGCAGCAGGATGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCAGC‑CTGGATGATTTTGAATTTAGCCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCGCCGCAGCCGCAGTATCAGCAGCCACAACAGCCGGTTGCGCCGCAGCCACAATATCAGCAGCCGCAACAACCGGTTGCGCCACAGCAGCAATATCAGCAGCCGCAACAACCGGTTGCGCCGCAGCAGCAG  >  CP042583/797970‑798526
                                                                                                                                                                                                                                                                                   |||                                                                                                                                                                                                                                                                                         
gTGCGGCGGAAGAAAAAGCCCGTGAAGCCCAGCGCAATCAGTACGATTCTGGCGATCAGTACAACGATGATGAAATCGATGCGATGCAGCAGGATGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGAttt                                                                                                                                                                                                                                                                               >  1:854075/1‑289 (MQ=255)
 tGCGGCGGAAGAAAAAGCCCGTGAAGCCCAGCGCAATCAGTACGATTCTGGCGATCAGTACAACGATGATGAAATCGATGCGATGCAGCAGGATGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGAtttt                                                                                                                                                                                                                                                                              >  1:1825112/1‑289 (MQ=255)
 tGCGGCGGAAGAAAAAGCCCGTGAAGCCCAGCGCAATCAGTACGATTCTGGCGATCAGTACAACGATGATGAAATCGATGCGATGCAGCAGGATGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGAtttt                                                                                                                                                                                                                                                                              >  1:1774187/1‑289 (MQ=255)
 tGCGGCGGAAGAAAAAGCCCGTGAAGCCCAGCGCAATCAGTACGATTCTGGCGATCAGTACAACGATGATGAAATCGATGCGATGCAGCAGGATGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGGTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGAtttt                                                                                                                                                                                                                                                                              >  1:1789617/1‑289 (MQ=255)
                    cGTGAAGCCCAGCGCAAGCAGTACGATTCTGGCGATCAGTTCAACGATGATGAAATCGATGCGATGCAGCAGGATGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGAGGATTTTGAATTTTCGCCAATGAAAg                                                                                                                                                                                                                                                           <  1:1176952/289‑1 (MQ=255)
                                cgcAATCAGTACGATTCTGGCGATCAGTACAACGATGATGAAATCGATGCGATGCAGCAGGATGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGg‑atg                                                                                                                                                                                                                                              >  1:1727350/1‑289 (MQ=255)
                                     tCAGTACGATTCTGGCGATCAGTACAACGATGATGAAATCGATGCGATGAAGCAGGATGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAAGCCGGTCTCG‑CTGGCTGATTGTGCATTTTTGCCAATGAACGCGTCTCTGG‑ATGATgg                                                                                                                                                                                                                                          >  2:349935/1‑288 (MQ=255)
                                           cGATTCTGGCGATCAGTACAACGATGATGAAATCGATGCGATGCAGCAGGATGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCacac                                                                                                                                                                                                                                   <  1:420860/289‑1 (MQ=255)
                                            gagtCTGGGGGTCAGTACAACGATGATGAAATGGATGCGATGCAGCAGGATGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACg                                                                                                                                                                                                                                  <  2:1714732/286‑1 (MQ=255)
                                                     gATCAGTACAACGATGATGAAATCGATGCGATGCAGCAGGATGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCgttg                                                                                                                                                                                                                          <  1:465847/288‑1 (MQ=255)
                                                            aCAACGATGATGAAATCGATGCGATGCAGCAGGATGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTAc                                                                                                                                                                                                                     <  1:1743706/286‑1 (MQ=255)
                                                             cAACGATGATGAAATCGATGCGATGCAGCAGGATGGACTGGCACGTCAGTGCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCGGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACTTTATTCCGGCGAACAACCGGCTGCGGCGAATCCGGTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCa                                                                                                                                                                                                                 <  1:441223/289‑1 (MQ=255)
                                                             cAACGATGATGAAATCGATGCGATGCAGCAGGATGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCAACACGAACCGTTGTTTACGCCa                                                                                                                                                                                                                 >  1:888607/1‑289 (MQ=255)
                                                                  atgatgAAATCGATGCGATGCAGCAGGATAAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑ATGGATGATTTTGACTTTTCGCCAATGAAAGCGTTGCGGG‑CTGATGGTCCGCACGAACCGTTGTTTACGACAAtggt                                                                                                                                                                                                            >  2:578351/1‑289 (MQ=255)
                                                                   tgatgaAATCGATGCGATGCAGCAGGATGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCcac                                                                                                                                                                                                                                     <  2:1194446/263‑1 (MQ=255)
                                                                   tgatgaAATCGATGCGATGCAGCAGGATGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCcac                                                                                                                                                                                                                                     >  1:1194446/1‑263 (MQ=255)
                                                                    gatgaAATCGATGCGATGCAGCAGGATGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAAttgttg                                                                                                                                                                                                          <  1:1114854/289‑1 (MQ=255)
                                                                     atgaAATCGATGCGATGCAGCAGGATGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCTAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGATGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACCCCCAttcttta                                                                                                                                                                                                         >  2:1808122/1‑287 (MQ=255)
                                                                     atgaAATCGATGCGATGCAGCAGGATGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAAtttggta                                                                                                                                                                                                         >  2:1749763/1‑284 (MQ=255)
                                                                     atgaAATCGATGCGATGCAGCAGGATGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGa                                                                                                                                                                                                         >  2:1544378/1‑289 (MQ=255)
                                                                     atgaAATCGATGCGATGCAGCAGGATGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGa                                                                                                                                                                                                         >  1:100456/1‑289 (MQ=255)
                                                                     atgaAATCGATGCGATGCAGCAGGATGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGa                                                                                                                                                                                                         >  1:1846143/1‑289 (MQ=255)
                                                                     atgaAATCGATGCGATGCAGCAGGATGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGa                                                                                                                                                                                                         <  2:1398181/289‑1 (MQ=255)
                                                                      tgaAATCGATGCGATGCAGCAGGATGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAACCTCAACAACAGCGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGa                                                                                                                                                                                                         <  1:1411431/288‑1 (MQ=255)
                                                                      tgaAATCGATGCGATGCAGCAGGATGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGa                                                                                                                                                                                                         <  2:1846143/288‑1 (MQ=255)
                                                                      tgaAATCGATGCGATGCAGCAGGATGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGa                                                                                                                                                                                                         <  1:349935/288‑1 (MQ=255)
                                                                      tgaAATCGATGCGATGCAGCAGGATGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGa                                                                                                                                                                                                         <  1:1254533/288‑1 (MQ=255)
                                                                      tgaAATCGATGCGATGCAGCAGGATGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGa                                                                                                                                                                                                         <  2:515922/288‑1 (MQ=255)
                                                                      tgaAATCGATGCGATGCAGCAGGATGAACTGGCACGTCAGTACGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGa                                                                                                                                                                                                         <  2:893650/288‑1 (MQ=255)
                                                                       gaAATCGATGCGATGCAGCAGGATGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAAc                                                                                                                                                                                                       <  1:1589443/289‑1 (MQ=255)
                                                                                          agactGAACTGGACCGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGca                                                                                                                                                                                       <  2:1511797/282‑1 (MQ=255)
                                                                                          agGATGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGcaa                                                                                                                                                                                      <  2:1060517/287‑1 (MQ=255)
                                                                                           ggATGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGcaaca                                                                                                                                                                                    >  1:1171708/1‑288 (MQ=255)
                                                                                              tGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTTGGGCGAATCCGTTTTCG‑CTGGATGATTTTGGATTTTCGCCAATGAAAGCGTTGCCGG‑ATTATTGTCCACACGAACCGTTGCTTACGTCAATTGTTGAACCTGTACAGCCGCCGCAACCACCg                                                                                                                                                                                >  2:749762/1‑289 (MQ=255)
                                                                                              tGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCg                                                                                                                                                                                >  1:1060191/1‑289 (MQ=255)
                                                                                                aaCTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGGCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGCATCCGGTCTCG‑CTGGCGGCATTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATTATGGTGCACCCGAACCGTTGTTTACGCCAATGGCTTAACCTGTACCGCACCCGCAACAACCgg                                                                                                                                                                               >  2:1491654/1‑288 (MQ=255)
                                                                                                    gccACGTCCGCTGGTCCAGAAACAGCGGACACGCTATGGCGAACAGTATGAGGATGATGGGCGCGTGACCGGAGAAGATGCAGATGCTGCGGCAGAGGCTGAACGAGCTAGTCAGTTGGCGCAAAATCAACAACAACGTTATTCCGGCGAACAAGCGGCTGGGGCGAATTCGTTCGCG‑CTAGATGATTTTGAATTTTCGCCAATGAAAGCGTTACTGG‑ATGGAGGCCCACACGAACCGTTGTGTGCGCCAATTGTTGAACCTGTACAGCAGCCGCAACAGCCGGTTGc                                                                                                                                                                           <  2:1425585/286‑1 (MQ=255)
                                                                                                      cACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCAc                                                                                                                                                                         >  1:315640/1‑288 (MQ=255)
                                                                                                      cACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCAc                                                                                                                                                                         >  2:714329/1‑288 (MQ=255)
                                                                                                       aCGTCAGTTCGCCCATACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGcaaccggttgttgcggct                                                                                                                                                                       <  1:1883937/289‑15 (MQ=255)
                                                                                                          tCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGT‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTTTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCgca                                                                                                                                                                     >  1:462817/1‑288 (MQ=255)
                                                                                                               tCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCgcagca                                                                                                                                                                  <  1:303109/286‑1 (MQ=255)
                                                                                                                       acacAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCg                                                                                                                                                                                                                                                         <  1:1451695/192‑1 (MQ=255)
                                                                                                                            gcagcaACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGcc                                                                                                                                                   >  1:572365/1‑288 (MQ=255)
                                                                                                                              agcaACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCagcagc                                                                                                                                                    <  1:1122836/285‑1 (MQ=255)
                                                                                                                                 aaCGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAAttgt                                                                                                                                                                                                            <  2:17348/226‑1 (MQ=255)
                                                                                                                                 aaCGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAAttgt                                                                                                                                                                                                            >  1:17348/1‑226 (MQ=255)
                                                                                                                                     cTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCa                                                                                                                                         >  1:1751784/1‑289 (MQ=255)
                                                                                                                                          gCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTAGCACCCCAGCCGCAATCTCAGCAGCCACCACAACCAGTTc                                                                                                                                     >  2:1889732/1‑288 (MQ=255)
                                                                                                                                             aaCAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTccgc                                                                                                                                  >  2:272516/1‑288 (MQ=255)
                                                                                                                                              aCAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATCTCAGCAGCCGCAACAACCAGTTccgcc                                                                                                                                 >  1:1020184/1‑288 (MQ=255)
                                                                                                                                              aCAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTccgccg                                                                                                                                <  1:712285/289‑1 (MQ=255)
                                                                                                                                                aGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGCTGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCCACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCT‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCTTTTTTTAAGCCACTTTTTGCAGCTGTACAGCGGCCGCAACAACCGGTTCCACCGCAGCCGTCATAACAGCAGCCGCAACAAACCATTCCgccgca                                                                                                                              >  2:432326/1‑289 (MQ=255)
                                                                                                                                                  tATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAAttttcgccaa                                                                                                                                                                                                                                                                 >  1:1218886/1‑150 (MQ=255)
                                                                                                                                                  tATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATcagcag                                                                                                                                                     <  1:475576/264‑1 (MQ=255)
                                                                                                                                                  tATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATcagcag                                                                                                                                                     >  2:475576/1‑264 (MQ=255)
                                                                                                                                                  tATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCgccgcag                                                                                                                             >  1:1701735/1‑288 (MQ=255)
                                                                                                                                                  cgcaagctggatgTGACCGTAAAAGCAGGAGAGGCAGATGCAGCGGCAGAGCCTGAACTGGCTAGTCAGTTTGCGCAAACTCAACAACACCGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCgccgcagc                                                                                                                            <  2:1400506/280‑1 (MQ=255)
                                                                                                                                                   aTCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCgccgcagcc                                                                                                                           <  1:36179/289‑1 (MQ=255)
                                                                                                                                                       aCATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCGccgcagccgcag                                                                                                                       <  1:532366/289‑1 (MQ=255)
                                                                                                                                                         atgatgTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATAGTCCACACGAACCGCTGTTTACGCCAATTTTTGAACCTGTACAGCAGCCGCAACAACCGGTGTCACCGCAGCAGCAAAATCAGCAGCACCAACCACCCGTTCcgccgccaccccacta                                                                                                                     >  2:1603490/1‑279 (MQ=255)
                                                                                                                                                            atgTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATcagcag                                                                                                                                                     >  2:866913/1‑254 (MQ=255)
                                                                                                                                                            atgTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCGCCGCAGCCGCAGTATca                                                                                                                  >  2:424644/1‑289 (MQ=255)
                                                                                                                                                            atgTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCGCCGCAGCCGCAGTATca                                                                                                                  >  1:1510378/1‑289 (MQ=255)
                                                                                                                                                            atgTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCGCCGCAGCCGCAGTATca                                                                                                                  >  1:658318/1‑289 (MQ=255)
                                                                                                                                                            atgTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCGCCGCAGCCGCAGTATca                                                                                                                  >  1:595143/1‑289 (MQ=255)
                                                                                                                                                             tgtgCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCGCCGCAGCCGCAGTATca                                                                                                                  <  1:961220/288‑1 (MQ=255)
                                                                                                                                                             tgtgCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTGGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCGCCGCAGCCGCAGTATca                                                                                                                  <  2:1820155/288‑1 (MQ=255)
                                                                                                                                                                 cccGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTGTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCGCCGCAGCCGCAGTATcagcag                                                                                                              >  1:1658875/1‑288 (MQ=255)
                                                                                                                                                                  ccGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGcaaca                                                                                                                                                                                    >  2:839750/1‑217 (MQ=255)
                                                                                                                                                                  ccGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGcaaca                                                                                                                                                                                    <  1:839750/217‑1 (MQ=255)
                                                                                                                                                                  ccGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCGCCGCAGCCGCAGTATCAGCAGcc                                                                                                            >  1:80416/1‑289 (MQ=255)
                                                                                                                                                                     agagccaggaagaTGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCGCCGCAGCCGCAGTATCAGCAGCcaca                                                                                                         <  1:900021/281‑1 (MQ=255)
                                                                                                                                                                           tagaagaTGCAGATGCGACGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACACCAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCGCCGCAGCCGCAGTATCAGCAGCCACAACAGc                                                                                                    <  2:977837/287‑1 (MQ=255)
                                                                                                                                                                           cAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCGCCGCAGCCGCAGTATCAGCAGCCACAACAGcc                                                                                                   >  1:1027043/1‑289 (MQ=255)
                                                                                                                                                                               agatgcagatgcTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCCTG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGAGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATACAATCCGCCGCAACAACCAGTTCCGCCGCCGCCGCAGCATCAGCCACCCCAACAGcccgc                                                                                                >  2:1113221/1‑285 (MQ=255)
                                                                                                                                                                                           tgcGGCAGGAGCTGAACTGGTTCGTCAGTGTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCGTGGGAGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGGACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCGCCGCAGCCGCAGTATCAGCAGCCACAACAGCCGGTTGCGCCGCAGCca                                                                                   <  2:1177111/289‑1 (MQ=255)
                                                                                                                                                                                           tgcGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCGCCGCAGCCGCAGTATCAGCAGCCACAACAGCCGGTTGCGCCGCAGcc                                                                                    <  2:1701735/288‑1 (MQ=255)
                                                                                                                                                                                            gcGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCGCCGCAGCCGCAGTATCAGCAGCCACAACAGCCGGTTGCGCCGCAGCcac                                                                                  >  1:1074092/1‑289 (MQ=255)
                                                                                                                                                                                                     gCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGCATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGCACCGTTGTTTACTCCAATTGTTGAACATGTACAGCAGCCGCAACAACCGGTTGCACCGCTGCAGCAATATCCGCATGCGCAACAACCAGTTCCGCCGCAGCCGCACTATGCACAGACACAACAGGCTGTTCCGCCGCAGcccacacactag                                                                          >  2:1129520/1‑278 (MQ=255)
                                                                                                                                                                                                     gCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCGCCGCAGCCGCAGTAACAGCAGCCCCAACAGCCGGTTCCCCCGCCGCCACCATCTcaag                                                                         >  2:66383/1‑287 (MQ=255)
                                                                                                                                                                                                       tGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCGCCGCAGCCGCAGTATCAGCAGCCACAACAGCCGGTTGCGCCGCAGCCACAATATcagca                                                                        <  1:1544378/288‑1 (MQ=255)
                                                                                                                                                                                                         aaCTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGa                                                                                                                                                                                                         <  1:271699/157‑1 (MQ=255)
                                                                                                                                                                                                          aCTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCGCCGCAGCCGCAGTATCAGCAGCCACAACAGCCGGTTGCGCCGCAGCCACAATATCAGCAGCCg                                                                    <  2:1729087/289‑1 (MQ=255)
                                                                                                                                                                                                                tgggccgatggagcAAACTCAGCAAAAAGGGTATTCCGGCCAAACACCGGCTGGGGTGGATCCG‑TCTGCGCTGGGTGATTGTTAATGTTCCACAATGAGAGGGGTTCGGG‑ATGGTGGTCCACACGAAACGTTGTGTACGCCAATTGTTGAACCTGTACAGCAGCAGCAACAACCGGTTGCGCCGCAGCAGCAATCTCACAAGCCGCAACAACCAGTTCCGCCGCAGCCGCAGTATCAGCAGCCACAACAGCCGGTTGCGCCGCAGCCACAATAGCAGCAGCCGcaaca                                                               <  2:1047235/276‑1 (MQ=255)
                                                                                                                                                                                                                   tCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCGCCGCAGCCGCAGTATCAGCAGCCACAACCGCCGTCTGCGCCGCACCCACAAAATCGCCAGCCGCAACAAccc                                                           >  2:25233/1‑288 (MQ=255)
                                                                                                                                                                                                                           cgcAACCTCACAAAAAACGTTATTCCGGCAAACAGCCGGCTGGGGCGAATCCGGTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGACCCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCGCCGCAGCCGCAGTATCAGCAGCCACAACAGCCGGTTGCGCCGCAGCCACAATATCAGCAGCCGCAACAACCGGTTgcgc                                                    <  2:539453/288‑1 (MQ=255)
                                                                                                                                                                                                                                accaaacaacaacGTCATGCCGCCGAACAACCGGCTGTGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCGCCGCAGCCGCAGTATCAGCAGCCACAACAGCCGGTTGCGCCGCAGCCACAATATCAGCAGCCGCAACAACCGGTTGCGCCAcagc                                              <  2:595203/285‑1 (MQ=255)
                                                                                                                                                                                                                                aCTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGGAATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCGCCGCAGCCGCAGTATCAGCAGCCACAACAGCCGGTCGCACCCCACCCACAATAGCACCCGCCGCAACAACCGGTTGCGCccca                                                >  2:1771668/1‑288 (MQ=255)
                                                                                                                                                                                                                                 ctaaaaaacagcGTTATTCCGGCAAAAAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCAAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACATCCAGTTCCGCCGCAGCCGCAGTATCAGCAGCCACAACAGCCGGTTGCGCCGCAGCCACAATATCAGCAGCCGCAACAACCGGTTGCGCCAcagca                                             <  2:910206/283‑1 (MQ=255)
                                                                                                                                                                                                                                 cTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCGCCGCAGCCGCAGTATCAGCAGCCACAACAGCCGGTTGCGCCGCAGCCACAATATCAGCAGCCGCAACAACCGGTTGCGCCAcagca                                             <  1:234895/289‑1 (MQ=255)
                                                                                                                                                                                                                                     acaacaacGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCgccgcagccgc                                                                                                                         >  1:1399164/1‑209 (MQ=255)
                                                                                                                                                                                                                                     acaacaacGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCGCCGCAGCCGCAGTATCAGCAGCCACAACAGCCGGTTGCGCCGCAGCCACAATATCAGCAGCCGCAACACCCGGTTGCGCca                                                  >  2:218701/1‑280 (MQ=255)
                                                                                                                                                                                                                                            cGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCGCCGCAGCCGCAGTATCAGCAGCCACAACAGCCGGTTGCGCCGCAGCCACAATATCAGCAGCCGCAACAACCGGTTGCGCCACAGCCGCAATATcagc                                  >  1:923606/1‑289 (MQ=255)
                                                                                                                                                                                                                                               tATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCGCCGCAGCCGCAGTATCAGCAGCCACAACAGCCGGTTGCGCCGCAGCCACAATATCAGCAGCCGCAACAACCGGTTGCGCCACAGCAGCAATATCagcagc                               <  1:1151801/289‑1 (MQ=255)
                                                                                                                                                                                                                                                aTTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCGCCGCAGCCGCAGTATCAGCAGCCACAACAGCCGGTTGCGCCGCAGCCACAATATCAGCCGCCGCAACCACCGGTTCCGCTACAGCACCAACACCaacagc                               >  2:306508/1‑288 (MQ=255)
                                                                                                                                                                                                                                                    cGGCGAACAACCTGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACg                                                                                                                                                                                                                                  >  2:18659/1‑89 (MQ=255)
                                                                                                                                                                                                                                                    cGGCGAACAACCGGCTGGGGCGAATCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCCATATCAGCAGCCGCGACAACCAGTTCCGCCGCAGCCGCAGTATCACAACCCACAACCGCCGGTTCACCCGCAGCCAACATACCAGCAGCCGCAACAACCGGTTGCGCCACAACCACAatatgcgccgccaca                           >  2:1303718/1‑277 (MQ=255)
                                                                                                                                                                                                                                                                           aTCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCGCCGCAGCCGCAGTATCAGCAGCCACAACAGCCGGTTGCGCCGCAGCCACAATATCAGCAGCCGCAACAACCGGTTGCGCCACAGCAGCAATATCAGCAGCCGCAACAACCGGTTGCGCCgcagcagc    <  1:1808122/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                            tCCGTTCTCG‑CTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCGCCGCAGCCGCAGTATCAGCAGCCACAACAGCCGGTTGCGCCGCAGCCACAATATCAGCAGCCGCCACAACCGGTTGCGCCACAGCAGCAAAAACAGCAGCACCAACAACCGGTCCCGCCGcaccagcag  >  2:813178/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                   |||                                                                                                                                                                                                                                                                                         
GTGCGGCGGAAGAAAAAGCCCGTGAAGCCCAGCGCAATCAGTACGATTCTGGCGATCAGTACAACGATGATGAAATCGATGCGATGCAGCAGGATGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCAGC‑CTGGATGATTTTGAATTTAGCCCAATGAAAGCGTTGCTGG‑ATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCGCCGCAGCCGCAGTATCAGCAGCCACAACAGCCGGTTGCGCCGCAGCCACAATATCAGCAGCCGCAACAACCGGTTGCGCCACAGCAGCAATATCAGCAGCCGCAACAACCGGTTGCGCCGCAGCAGCAG  >  CP042583/797970‑798526

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A