Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 812,610 3 bp→TCA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583812,6100AT99.6% 672.0 / NA 282intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (132/148);  minor base C (1/0);  total (133/149)
Fisher's exact test for biased strand distribution p-value = 4.73e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583812,6110GC100.0% 670.5 / NA 282intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (133/149);  total (133/149)
*CP042583812,6120TA99.7% 673.6 / NA 282intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (133/148);  minor base G (0/1);  total (133/149)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 282 total aligned reads displayed.

CGTTGTTCCAGTGTTTTAATACTATGGCTAATGGCGGAGCTGGATAAGCCTAACTCATCGCCCGCTGCACGAAAGCTTTGATTACGGGCCACGGCAAAGAAAGTGGCAAAGTCAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATAGTTTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATAGTGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCAATGCTAAAAGGATATATTGACAGAGTATGGAATAATGGGCTG  >  CP042583/812332‑812891
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                        
cGTTGTTCCAGTGTTTTAATACTATGGCTAATGGCGGACGAGGATAAGCCTAACTCATCGCCCGCTGCACGAAAGCTTTGATTACGGGCCACGGCAAAGAAAGTGGCAAAGTCAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGAcc                                                                                                                                                                                                                                                                                    <  2:312723/287‑1 (MQ=255)
cGTTGTTCCAGTGTTTTAATACTATGGCTAATGGCGGACGAGGATAAGCCTAACTCATCGCCCGCTGCACGAAAGCTTTGATTACGGGCCACGGCAAAGAAAGTGGCAAAGTCAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCg                                                                                                                                                                                                                                                                                   <  2:1421396/288‑1 (MQ=255)
   tgttCCAGTGTTTTAATACTATGGCTAATGGCGGACGAGGATAAGCCTAACTCATCGCCCGCTGCACGAAAGCTTTGATTACGGGCCACGGCAAAGAAAGTGGCAAAGTCAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGcaca                                                                                                                                                                                                                                                                               >  1:509294/1‑289 (MQ=255)
              tttAATACTATGGCTAATGGCGGACGAGGATAAGCCTAACTCATCGCCCGCTGCACGAAATCTTTGATTACGGGCCACGGCAAAGAAAGTGGCAAAGTCAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATg                                                                                                                                                                                                                                                                   <  1:1352734/289‑1 (MQ=255)
              tttAATACTATGGCTAATGGCGGACGAGGATAAGCCTAACTCATCGCCCGCTGCACGAAAGCTTTGATTACGGGCCACGGCAAAGAAAGTGGCAAAGTCAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATg                                                                                                                                                                                                                                                                   <  1:1726300/289‑1 (MQ=255)
              tttAATACTATGGCCAATGGCGGACGAGGATAAGCCTAACTCATCGCCCGCTGCACGAAAGCTTTGATTACGGGCCACGGCAAAGAAAGTGGCAAAGTCAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATg                                                                                                                                                                                                                                                                   <  1:828735/289‑1 (MQ=255)
                       aTGGCTAATGGCGGACGGGGATAAGCCTAACTCATCGCCCGCTGCACGAAAGATTTGATTACGGGCAACGGCAAAGAAAGTGGCAAAGTCAGACATATTCATCCGCATTA‑GTGAAAATCCTTCACTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGAGTAAAGTGCGCTCCAGAACTTAACGTGGTGGTAAAATTATTCAGTCTGAACGTATTTG‑TGTGGTATGGGCCCATCCTCGTCAGGATCCATTGACGGCACA‑TACTGCTGATGCGATGCaac                                                                                                                                                                                                                                                          >  2:1136016/1‑287 (MQ=255)
                       aTGGCTAATGGCGGACGAGGATAAGCCTAACTCATCGCCCGCTGCACGAAAGCTTTGATTACGGGCCACGGCAAAGAAAGTGGCAAAGTCAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATc                                                                                                                                                                                                                                                          >  1:335670/1‑289 (MQ=255)
                       aTGGCTAATGGCGGACGAGGATAAGCCTAACTCATCGCCCGCTGCACGAAAGCTTTGATTACGGGCCACGGCAAAGAAAGTGGCAAAGTCAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATc                                                                                                                                                                                                                                                          >  1:395038/1‑289 (MQ=255)
                        tGGCTAATGGCGGACGAGGATAAGCCTAACTCATCGCCCGCTGCACGAAAGCTTTGATTACGGGCCACGGCAAAGAAAGTGGCAAAGTCAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCa                                                                                                                                                                                                                                                         <  1:148350/289‑1 (MQ=255)
                                   ggacgaggATAAGCCTAACTCATCGCCCGCTGCACGAAAGCTTTGATTACGGGCCACGGCAAAGAAAGTGGCAAAGTCAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATg                                                                                                                                                                                                                                               <  1:364774/283‑1 (MQ=255)
                                    gacgaggATAAGCCTAACTCATCGCCCGCTGCACGAAAGCTTTGATTACGGGCCACGGCAAAGAAAGTGGCAAAGTCAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGa                                                                                                                                                                                                                                             >  2:94892/6‑289 (MQ=255)
                                    gacgaggATAAGCCTAACTCATCGCCCGCTGCACGAAAGCTTTGATTACGGGCCACGGCAAAGAAAGTGGCAAAGTCAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGa                                                                                                                                                                                                                                             >  2:1149606/6‑289 (MQ=255)
                                                   aaCTCATCGCCCGCTGCACGAAAGCTTTGATTACGGGCCACGGCAAAGAAAGTGGCAAAGTCAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGGCAGGATTCATTGACCG‑ACACTATTGCTTATGACATCCATTAGCGGGCCATGGAGCGGAAAATACAGGt                                                                                                                                                                                                                              >  2:1652180/1‑289 (MQ=255)
                                                    aCTCATCGCCCGCTGCACGAAAGCTTTGATTACGGGCCACGGCAAAGAAAGTGGCAAAGTCAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTg                                                                                                                                                                                                                             >  1:1176825/1‑289 (MQ=255)
                                                     cTCATCGCCCGCTGCACGAAAGCTTTGATTACGGGCCACGGCAAAGAAAGTGGCAAAGTCAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTg                                                                                                                                                                                                                             >  2:1113218/1‑288 (MQ=255)
                                                     cTCATCGCCCGCTGCACGAAAGCTTTGATTACGGGCCACGGCAAAGAAAGTGGCAAAGTCAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGa                                                                                                                                                                                                                            <  1:846340/289‑1 (MQ=255)
                                                     cTCATCGCCCGCTGCACGAAAGCTTTGATTACGGGCCACGGCAAAGAAAGTGGCAAAGTCAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCAGGATTCATTTACCGCACA‑TATTTCTGATGCGATCCATCAGCGGGCAAGGGAGCGGAAAATAcctgtc                                                                                                                                                                                                                             >  2:1012358/1‑283 (MQ=255)
                                                          cGCCCGCTGCACGAAAGCTTTGATTACGGGCCACGGCAAAGAAAGTGGCAAAGTCAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGaa                                                                                                                                                                                                                       <  1:1538530/289‑1 (MQ=255)
                                                          cGCCCGCTGCACGAAAGCTTTGATTACGGGCCACGGCAAAGAAAGTGGCAAAGTCAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTCAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGaa                                                                                                                                                                                                                       >  1:1632389/1‑289 (MQ=255)
                                                                cTGCACGAAAGCTTTGATTACGGGCCACGGCAAAGAAAGTGGCAAAGTCAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCa                                                                                                                                                                                                                                                         <  1:1584126/249‑1 (MQ=255)
                                                                        aaGCTTTGATTACGGGCCACGGCAAAGAAAGTGGCAAAGTCAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTatat                                                                                                                                                                                                           <  2:1292608/287‑1 (MQ=255)
                                                                            tttGATTACGGGCCACGGCAAAGAAAGTGGCAAAGTCAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCg                                                                                                                                                                                                      <  2:433073/288‑1 (MQ=255)
                                                                            tttGATTACGGGCCACGGCAAAGAAAGTGGCAAAGTCAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGt                                                                                                                                                                                                     <  2:1615921/289‑1 (MQ=255)
                                                                            tttGATTACGGGCCACGGCAAAGAAAGTGGCAAAGTCAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGt                                                                                                                                                                                                     <  1:1034048/289‑1 (MQ=255)
                                                                                aTTACGGGCCACGGCAAAGAAAGTGGCAAAGTCAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAAtt                                                                                                                                                                                                 >  1:1010360/1‑289 (MQ=255)
                                                                                              cAAAGAAAGTGGCAAAGTCAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGtgat                                                                                                                                                                                    <  1:982978/288‑1 (MQ=255)
                                                                                              cAAAGAAAGTGGCAAAGACAGACATAGTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGtgat                                                                                                                                                                                    <  1:1206063/288‑1 (MQ=255)
                                                                                                    aagTGGCAAAGTCAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCg                                                                                                                                                                             <  1:1315580/289‑1 (MQ=255)
                                                                                                       tGGCAAAGTCAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGcaca                                                                                                                                                                                                                                                                               >  2:1530813/1‑189 (MQ=255)
                                                                                                        ggCAAAGTCAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGa                                                                                                                                                                           <  1:1075236/287‑1 (MQ=255)
                                                                                                        ggCAAAGTCAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACCCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAg                                                                                                                                                                         <  1:566548/289‑1 (MQ=255)
                                                                                                                cAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCa                                                                                                                                                                 <  2:748105/289‑1 (MQ=255)
                                                                                                                cAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCa                                                                                                                                                                 <  1:1718179/289‑1 (MQ=255)
                                                                                                                   aCATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAg                                                                                                                                                                >  1:1876145/1‑287 (MQ=255)
                                                                                                                       atTCCTACGCATTATGTGAC‑ATCCTTCATTAACTCATACTGAATCATCACGTTTACAGGATTATGCAGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGga                                                                                                                                                          <  2:106293/289‑1 (MQ=255)
                                                                                                                             ccGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAata                                                                                                                                                    >  2:850384/1‑289 (MQ=255)
                                                                                                                                cATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATgg                                                                                                                                                 >  2:1589926/1‑289 (MQ=255)
                                                                                                                                        gAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACg                                                                                                                                          <  1:759192/289‑1 (MQ=255)
                                                                                                                                         aaaaTCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGt                                                                                                                                         >  1:175005/1‑289 (MQ=255)
                                                                                                                                           attccttcctTAACCCATCCGGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGAACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTa                                                                                                                                       <  2:872673/287‑1 (MQ=255)
                                                                                                                                           aaTCCTTCATTAACTCAGCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGATCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTa                                                                                                                                       <  2:1417194/289‑1 (MQ=255)
                                                                                                                                                                gAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCt                                                                                                                  <  1:1149606/289‑1 (MQ=255)
                                                                                                                                                                gAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCt                                                                                                                  <  1:94892/289‑1 (MQ=255)
                                                                                                                                                                 aaTCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCtt                                                                                                                 >  2:914331/1‑289 (MQ=255)
                                                                                                                                                                      tcaCGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACTGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTtattc                                                                                                            >  1:606433/1‑287 (MQ=255)
                                                                                                                                                                      tcaCGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCt                                                                                                                  <  2:1390963/283‑1 (MQ=255)
                                                                                                                                                                          gTTTACAGGATTATGCCGCCTGCGTAAAGTGCGATCCAGAACTTAACGTGGAGGTAAAATTATGCAATCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGTAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTtattcagag                                                                                                        <  2:1729769/289‑7 (MQ=255)
                                                                                                                                                                                  gATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTg                                                                                                 <  2:509294/288‑1 (MQ=255)
                                                                                                                                                                                     tacgcagccTGCGTAAGGTGCGTTCCCGAACTTAACGTGGAGGTAAATTTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACa                                                                                             <  2:347419/283‑1 (MQ=255)
                                                                                                                                                                                     tATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCaga                                                                                                                              <  2:1170938/256‑1 (MQ=255)
                                                                                                                                                                                        gccgccTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGa                                                                                          <  1:408717/289‑1 (MQ=255)
                                                                                                                                                                                         ccgacTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGa                                                                                          <  1:800210/288‑1 (MQ=255)
                                                                                                                                                                                           gccTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGacac                                                                                       <  1:262457/289‑1 (MQ=255)
                                                                                                                                                                                            ccTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGCGCTGCTTGAACATGACACg                                                                                      >  1:965486/1‑289 (MQ=255)
                                                                                                                                                                                                cGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAg                                                                                  >  2:1773196/1‑289 (MQ=255)
                                                                                                                                                                                                          gcTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAgctgc                                                                                                    <  2:307865/261‑1 (MQ=255)
                                                                                                                                                                                                               aGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCctc                                                                   <  2:1571395/289‑1 (MQ=255)
                                                                                                                                                                                                                      aaCGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCtggtg                                                            >  1:1286068/1‑289 (MQ=255)
                                                                                                                                                                                                                      aaCGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCtggtg                                                            >  2:579299/1‑289 (MQ=255)
                                                                                                                                                                                                                           ggAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTAc                                                        <  1:228498/288‑1 (MQ=255)
                                                                                                                                                                                                                             aGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGaa                                                                                               >  2:23450/1‑247 (MQ=255)
                                                                                                                                                                                                                              ggTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTtcat                                                                                                                       >  1:140805/1‑222 (MQ=255)
                                                                                                                                                                                                                                      tATGCAGTGTGAAAGGATTTA‑TTTGGTATGGGCCCATCCTCGTCATGGTTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCa                                            <  2:125753/289‑1 (MQ=255)
                                                                                                                                                                                                                                      tATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACTGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCa                                            <  2:606433/289‑1 (MQ=255)
                                                                                                                                                                                                                                       aTGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCaa                                           >  2:191143/1‑289 (MQ=255)
                                                                                                                                                                                                                                       aTGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCaa                                           <  1:1003448/289‑1 (MQ=255)
                                                                                                                                                                                                                                         gCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAAGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCAAt                                          >  1:1671056/1‑288 (MQ=255)
                                                                                                                                                                                                                                             tCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCAATGCTaa                                     >  1:302663/1‑289 (MQ=255)
                                                                                                                                                                                                                                             tCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCATCTCTGGTGGTAc                                                        >  1:139015/1‑270 (MQ=255)
                                                                                                                                                                                                                                             tCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGGTTTTCCTCTTTGGTTGTACAGCTTCCCGGCAATGCTaa                                     >  2:1640741/1‑289 (MQ=255)
                                                                                                                                                                                                                                               tGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCAATGCTaaaa                                   >  2:11894/1‑289 (MQ=255)
                                                                                                                                                                                                                                               tGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCAATGCTaaaa                                   >  1:202468/1‑289 (MQ=255)
                                                                                                                                                                                                                                                  acttttttt‑tttGGGATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCGGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCAATGCTAAAAGGa                                <  2:8330/284‑1 (MQ=255)
                                                                                                                                                                                                                                                  aCGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCAATGCTAAAAGGa                                <  1:1809028/289‑1 (MQ=255)
                                                                                                                                                                                                                                                       ttta‑tttGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTTGTTTTTCCTCCCTTTTGGTACAGCTTCCCTGCAATGCTAAACggcattat                           >  2:140340/1‑283 (MQ=255)
                                                                                                                                                                                                                                                       ttta‑tttGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCctc                                                                   <  1:342122/249‑1 (MQ=255)
                                                                                                                                                                                                                                                       ttta‑tttGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCAATGCTAAAAg                                  <  2:275930/282‑1 (MQ=255)
                                                                                                                                                                                                                                                       ttta‑tttGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCAATGCTAAAAGGatat                             >  2:569712/1‑287 (MQ=255)
                                                                                                                                                                                                                                                            tttGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTATCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCAATGCTAAAAGGATATATTGAc                       <  2:175005/289‑1 (MQ=255)
                                                                                                                                                                                                                                                             ttGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCAATGCTAAAAGGATATATTGACa                      <  2:211505/289‑1 (MQ=255)
                                                                                                                                                                                                                                                             ttGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCAATGCTAAAAGGATATATTGACa                      <  2:395038/289‑1 (MQ=255)
                                                                                                                                                                                                                                                             ttGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCAATGCTAAAAGGATATATTGACa                      <  1:30979/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                  aTGGGCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCAATGCTAAAAGGATATATTGACAGAGTa                 <  1:1559653/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                    gggCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCAATGCTAAAAGGATATATTGACAGAGTATg               <  1:1130002/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                     ggCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCg                                                                                                                                                                                                                                          <  2:1366004/69‑1 (MQ=255)
                                                                                                                                                                                                                                                                     ggCCCATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCAATGCTAAAAGGATATATTGACAGAGTATg               <  2:1783839/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                         cATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCAATGCTAAAAGGATATATTGACAGAGTATGGaata          <  1:11894/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                         cATCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCAATGCTAAAAGGATATATTGACAGAGTATGGaata          <  1:1773196/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                           tCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTTCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCAATGCTAAAAGGATATATTGACAGAGTATGGtataat        >  1:929353/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                           tCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCAATGCTAAAAGGATATATTGACAGAGTATGGaataat        >  1:496670/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                           tCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCAATGCTAAAAGGATATATTGACAGAGTATGGaataat        >  2:1315787/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                           tCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAAAGCTGCTTGACAATGACACGTTAGTGGTGGTTTTTCCTCTCTTGTGGTACAGCTTCCCGGCAATGCTACACGGATATAATGACAGCGTATTGacttac        >  2:1502953/1‑284 (MQ=255)
                                                                                                                                                                                                                                                                           tCCTCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGAAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGAAACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGACAATGCTAAAAGGCTATATTGACAGAGAATGAcataat        >  1:1159816/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                              tCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCAATGCTAAAAGGATATATTGACAGAGTATGGAATAATggg     <  1:579299/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                              tCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCAATGCTAAAAGGATATATTGACAGAGTATGGAATAATggg     <  1:1640741/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                              tCGTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCAATGCTAAAAGGATATATTGACAGAGTATGGAATAATggg     <  2:33480/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                gTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGAc                                                                                                                                                              <  2:698867/134‑1 (MQ=255)
                                                                                                                                                                                                                                                                                gTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGAc                                                                                                                                                              >  1:698867/1‑134 (MQ=255)
                                                                                                                                                                                                                                                                                gTCATGATTCATTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTCGTGGTGGTTTTTCCTCTCTGGGGGTACAGCTTCCCGGCAATGCTAAAAGGACATATTGTCAGAGTATGGAATCATgg      >  2:1455387/1‑286 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                        
CGTTGTTCCAGTGTTTTAATACTATGGCTAATGGCGGAGCTGGATAAGCCTAACTCATCGCCCGCTGCACGAAAGCTTTGATTACGGGCCACGGCAAAGAAAGTGGCAAAGTCAGACATATTCATCCGCATTA‑GTGAAAATCCTTCATTAACTCATCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTA‑TTTGGTATGGGCCCATCCTCGTCATGATAGTTTGACCGCACA‑TATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATAGTGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCAATGCTAAAAGGATATATTGACAGAGTATGGAATAATGGGCTG  >  CP042583/812332‑812891

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A