Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F210 I1 R1
|
4930 |
262.8 |
3829204 |
96.6% |
3699011 |
272.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,806,869 |
6 bp→TCATCG |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,806,869 | 0 | A | T | 99.1%
| 501.0
/ ‑3.3
| 216 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (1/0); major base T (104/108); minor base . (0/2); total (105/111) |
| Fisher's exact test for biased strand distribution p-value = 4.98e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,806,870 | 0 | G | C | 99.5%
| 502.2
/ NA
| 216 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base C (105/108); total (105/111) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,806,871 | 0 | T | A | 99.1%
| 509.7
/ NA
| 216 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/1); major base A (105/108); minor base C (0/2); total (105/111) |
| Fisher's exact test for biased strand distribution p-value = 4.98e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,806,872 | 0 | A | T | 98.6%
| 496.7
/ NA
| 216 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/3); new base T (105/108); total (105/111) |
| Fisher's exact test for biased strand distribution p-value = 2.47e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 |
| * | CP042583 | 1,806,873 | 0 | G | C | 99.1%
| 502.3
/ NA
| 216 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/2); new base C (105/108); total (105/111) |
| Fisher's exact test for biased strand distribution p-value = 4.98e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,806,874 | 0 | C | G | 98.6%
| 499.8
/ NA
| 216 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/3); new base G (105/107); total (105/111) |
| Fisher's exact test for biased strand distribution p-value = 2.47e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 216 total aligned reads displayed.
CCGATTATTCTGGCAGTAATGGGCTAAAATTTGCGATGCGTCGCGCATTTTTGATGTATGTTTCACGCGTTGCATAATTAATGAGATTCAGATCACATATAAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑AGTAGCCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGAGCAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGG > CP042583/1806599‑1807143
||||||
ccGATTATTCTGGCAGTAATGGGCTAAAATTTGCGATGCGTCGCGCATTTTTGATGTATGTTTCACGCGTTGCATAATTAATGAGATTCAGATCACATATAAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCaa < 1:1632831/289‑1 (MQ=255)
attattCTGGCAGTAATGGGCTAAAATTTGCGATGCGTCGCGCATTTTTGATGTATGTTTCACGCGTTGCATAATTAATGAGATTCAGATCACATATAAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACgg > 1:1440468/1‑289 (MQ=255)
aaTGGGCTAAAATTTGCGATGCGTCGCGCATTTTTGATGTATGTTTCACGCGTTGCATAATTAATGAGATTCAGATCACATATAAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGAc > 1:167069/1‑289 (MQ=255)
aaaaATTGCGATGCGTCGGGCATTTTTGATGTATGTTTCACGCGTTGCATAATTAATGAGATTCAGATCACATATAAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGc < 1:62921/289‑1 (MQ=255)
attggcgcggCGTGGTGCATTTTTGAGGTGTGTTTCAGGCGTTGCATAGTTAATGAGATTCAGATCACAGATAAAGCCAACACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCACCTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCAtt < 2:450256/280‑1 (MQ=255)
tGCGATGCGTCGCGCATTTTTGATGTATGTTTCACGCGTTGCATAATTAATGAGATTCAGATCACATATAAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCaa < 1:546759/258‑1 (MQ=255)
gCGATGCGTCGCGCATTTTTGATGTATGTTTCACGCGTTGCATAATTAATGAGATTCAGATCACATATAAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGc > 1:563917/1‑288 (MQ=255)
cgcATTTTTGATGTATGTTTCACGCGTTGCATAATTAATGAGATTCAGATCACATATAAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTcc > 1:962182/1‑286 (MQ=255)
gATGTATGTTTCACGCGTTGCATAATTAATGAGATTCAGATCACATATAAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTggcggcggc < 1:1626590/289‑1 (MQ=255)
gATGTATGTTTCACGCGTTGCATAATTAATGAGATTCAGATCACATATAAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTggcggcggc < 2:1468980/289‑1 (MQ=255)
tatgtTTCACGCGTTGCATAATTAATGAGATTCAGATCACATATAAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCtgt > 2:334792/1‑289 (MQ=255)
tatgtGTCACGCTTTTCATAATTAATGAGATACAAATCACATATAAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATGATGAGTCAACGCCATGCATCCACTTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTGTTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCATCGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCtgt < 2:1047894/289‑1 (MQ=255)
tgtTTCACGCGTTGCATAATTAATGAGATTCAGATCACATATAAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTgc > 1:211933/1‑289 (MQ=255)
tgtTTCACGCGTTGCATAATTAATGAGATTCAGATCACATATAAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGATGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTTGCGGCGGCCtgtg > 1:1222457/1‑288 (MQ=255)
cACGCGTTGCATAATTAATGAGATTCAGATCACATATAAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTa < 2:1905112/289‑1 (MQ=255)
cACGCGTTGCATAATTAACGAGATTCAGATCACATATAAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTa < 1:1123215/289‑1 (MQ=255)
tGCATAATTAATGAGATTCAGATCACATATAAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCACTCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGCGGCGGGACGAAGACGCGCGGGCA‑TCGCGCCTACTTACCCTGGCGGCGGCCtgtggcgctacgc > 2:1787053/1‑276 (MQ=255)
cATAATTAATGAGATTCAGATCACATATAAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTCCGCCCttc > 2:6103/1‑287 (MQ=255)
taatGAGATTCAGATCACATATAAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTgtcgaatt > 1:783344/1‑282 (MQ=255)
gagaTTCAGATCACATATAAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTTCGCGTACGCCATTGTCGAATTTTaa > 2:376908/1‑289 (MQ=255)
aTTCAGATCACATATAAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGt > 1:1214839/1‑289 (MQ=255)
aTTCAGATCACATATAAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGATTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTTCGCGTACGCCATTGTCGAATTTTAATGt > 1:1087621/1‑289 (MQ=255)
ttacgATCACATATAAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGt < 2:1884571/284‑1 (MQ=255)
tCAGATCACATATAAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTg > 1:474386/1‑289 (MQ=255)
tCAGATCACATATAAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTg > 1:1409591/1‑289 (MQ=255)
cgATCACATATAGAGCCAAAACGGGTTCGTAAACTGTTGTCCCATTACATGATTCTGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACGTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGgc < 2:619432/288‑1 (MQ=255)
ataAAGCCACAGCGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAACCCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGATCCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTgcg < 1:1116957/289‑1 (MQ=255)
aaaGCCACAACGGTGTCGTAACCTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTgcgcg < 2:401179/289‑1 (MQ=255)
aaaGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTgcgcg < 2:939243/289‑1 (MQ=255)
aaGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCCTTGTCGAATTTTAATTTTGGCGCAATTtcgcgc > 2:1340195/1‑289 (MQ=255)
aaGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTgcgcgc < 1:1896499/289‑1 (MQ=255)
aaGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTgcgcgc > 1:651010/1‑289 (MQ=255)
aaGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTgcgcgc < 1:1340195/289‑1 (MQ=255)
aaGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTgcgcgc < 1:1463177/289‑1 (MQ=255)
caACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCtgt < 1:1273873/238‑1 (MQ=255)
aaaCGGGTTCTTAAACTGTTATCCCATTAAATGATTATGCGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACC‑‑GGAGCAAGTC‑TCATCGCTGAAAAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAg < 2:1799483/288‑1 (MQ=255)
aaCGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑CCTACTTCCGCTGGCGGCGGCCTGTGCGCGTCAGCCCTTGTCGAATTTTAATTTTGGCGCAATTGCGCGCGgtggca > 2:1682385/1‑286 (MQ=255)
aaCGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGACTTTTAATGTTGGCGCAATTGAGCGCGGTGTGa > 1:891749/1‑289 (MQ=255)
aCGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAg < 2:651010/289‑1 (MQ=255)
gTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGa > 1:1001824/1‑289 (MQ=255)
ttCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTgcgcgc < 2:436653/276‑1 (MQ=255)
tCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTgcgcg < 2:1630391/274‑1 (MQ=255)
cGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAGGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAAcc < 2:1526761/289‑1 (MQ=255)
cGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGaa > 1:400901/1‑287 (MQ=255)
tAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCtgt < 2:1778369/227‑1 (MQ=255)
tAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCtgt < 2:314839/227‑1 (MQ=255)
tAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTg > 2:1835290/1‑289 (MQ=255)
ttATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTc > 1:820397/1‑289 (MQ=255)
ttACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCa < 2:1542718/288‑1 (MQ=255)
ttACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCa > 1:116279/1‑288 (MQ=255)
ttACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCa > 1:1542718/1‑288 (MQ=255)
ttACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCa < 2:116279/288‑1 (MQ=255)
aCATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCaaga > 1:1551585/1‑287 (MQ=255)
tGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTa > 1:1183510/1‑289 (MQ=255)
tGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGACCGGAACCTGGTATTTCGGTGCCCATATGGAATTTa > 2:112813/1‑289 (MQ=255)
aGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCg < 1:1365961/254‑1 (MQ=255)
aGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCg > 2:1365961/1‑254 (MQ=255)
aGGCAACGCCATGCATACACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTGGGCGCAATTGACCGCGGTGTGAGCGGAACCTGGTATTTCGGGCCCAATCTGGAAtttttg > 2:1191139/1‑286 (MQ=255)
aaCGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGGGGAACCTGGTATTTCGGTGCCAATATCAATTTTCTTGGTg > 2:476816/1‑289 (MQ=255)
aaCGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTg < 1:724073/289‑1 (MQ=255)
aCGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAAt < 1:229023/232‑1 (MQ=255)
aCGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGc < 1:1595548/289‑1 (MQ=255)
cGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCATGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTCCTTCCGCCGGCGGCGGCCTGTTCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCCATTGCGCGCGGTCTGAACGGAAACCGGTATTTCGGGTCCGATATGGAACTTATTTGTGCg > 2:492282/1‑289 (MQ=255)
cGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGTACCTGGTATTTCGGTGCCAAGATGGAATTTAGTGGTGCg > 2:1595548/1‑289 (MQ=255)
tGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAAt > 1:1890720/1‑289 (MQ=255)
gCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGCACCTGGTATTTCGGTTCCACTATGGAATTTATTGGTTCGACAAt > 2:1295187/1‑288 (MQ=255)
ccACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGCGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATgcaga > 1:875968/1‑288 (MQ=255)
aCGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGTAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCaa < 1:1263111/289‑1 (MQ=255)
cGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTgcgcg > 1:248857/1‑224 (MQ=255)
cGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTgcgcg < 2:248857/224‑1 (MQ=255)
gTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAAc < 1:179139/289‑1 (MQ=255)
ttCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGa < 2:786778/273‑1 (MQ=255)
ttCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGt < 2:563917/289‑1 (MQ=255)
ttCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGt < 1:1880340/289‑1 (MQ=255)
ttCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGt < 2:1219830/289‑1 (MQ=255)
ccGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGc < 1:284327/289‑1 (MQ=255)
tttGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAAc < 1:320484/289‑1 (MQ=255)
gCCCGACTTGCGGGTAGCTTGCAATCTGCACTGGAAGCTATACTGGCAGGCAAGTATGTCCCCGCTTTGTTGAGCGGGGAGCAAGGCTCATAG‑CTGAAGAGCGCAGCGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACaaa < 2:1890720/289‑1 (MQ=255)
aCTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCCAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTAGGCCATTTTCGAATTTTAATGTTTGCGCAATTGCGCGCGGTGCGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTTCGACAATGCACCAAACCGTTCATGCCGAACAAAgcgca > 2:779446/1‑288 (MQ=255)
cTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGa > 2:1727770/1‑289 (MQ=255)
cTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATCTTAATGTTGGCGCAATTGCGCGCGGTGTGGGCGGAACCTGACATTTCGGTGCCAATATGGCATTGATTGGTGCGCGAAGGCGGCAAAACGTTATTGGCGAGCaaacaggg > 2:143116/1‑283 (MQ=255)
gCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCa > 1:175274/1‑289 (MQ=255)
gCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTgg < 2:742322/289‑1 (MQ=255)
gCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTgg < 1:1295187/289‑1 (MQ=255)
cTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAg < 1:376908/289‑1 (MQ=255)
cTGCACTGGAACCAATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAg < 2:591876/289‑1 (MQ=255)
aCCTATGCTGGCAGACAGGTACTTCCCCGCTTTGTTGGCCGGGGAGCACGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGt < 2:1009867/240‑1 (MQ=255)
ccTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGc < 2:473591/245‑1 (MQ=255)
aTTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGtt < 1:489777/272‑1 (MQ=255)
aTTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGtt > 2:489777/1‑272 (MQ=255)
tGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTAGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAACTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTCTTGGTTCGACAATGCAGCAAAACGTGCATGCCGAACAACGCCAGAGCAGCCACGCCTGTCTGAGTGGGTAAAAAGCGCTGGc > 2:1396721/1‑289 (MQ=255)
gCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑ACATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATGGTCGAATTTTACTGTTGGCGCAATTGCGCGCGGTAGGAGCGGAACCTGGTAGTTCGGTGCCAATATGGAATTTATTGGTTGGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGAACAGCCACGCCGTGGTGACTGGGTAACACGCGCTTGCa > 2:540730/1‑288 (MQ=255)
cAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCATACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCAt < 2:211933/288‑1 (MQ=255)
ccGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTa < 1:1027389/289‑1 (MQ=255)
cGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTac < 1:1835290/289‑1 (MQ=255)
cTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTacac > 1:419393/1‑289 (MQ=255)
cTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTacac > 1:457969/1‑289 (MQ=255)
cTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTacac > 1:327672/1‑289 (MQ=255)
tgttgACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTTCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTTGTGCGACAATGCAGCAAACCGTTCATTCCGAACAAAGCGCGACCAGCCACGCCTCGTGCAGGGGTGAAAAACCGCGTGCAGCCATCACCCTTAACTaccccc > 2:1095381/1‑284 (MQ=255)
ttgACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACTCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAAAGTTGGCGCAATTGCGAGCGGTGTAACCGGCACCTTGTTTTTCGGTGCCAATATGGACTCTTTTGGTCAGACAATGTACCACACTGTTCATTCCAACCAAAGCGCGATCAGCCACGCTGGGGTGAGTGGTGATAAAGAGCTCGCAGTACTCCCCGCTACCTCCACGcc > 2:1248395/1‑287 (MQ=255)
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CCGATTATTCTGGCAGTAATGGGCTAAAATTTGCGATGCGTCGCGCATTTTTGATGTATGTTTCACGCGTTGCATAATTAATGAGATTCAGATCACATATAAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑AGTAGCCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑ACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGAGCAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGG > CP042583/1806599‑1807143
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
