Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F210 I1 R1
|
4930 |
262.8 |
3829204 |
96.6% |
3699011 |
272.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,931,540 |
3 bp→TGA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,931,540 | 0 | A | T | 99.6%
| 638.7
/ NA
| 272 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base T (141/128); total (143/129) |
| Fisher's exact test for biased strand distribution p-value = 4.78e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,931,541 | 0 | C | G | 99.3%
| 637.3
/ NA
| 272 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base G (142/126); minor base A (0/2); total (143/129) |
| Fisher's exact test for biased strand distribution p-value = 2.24e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,931,542 | 0 | T | A | 99.3%
| 637.4
/ NA
| 272 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/2); new base A (143/127); total (143/129) |
| Fisher's exact test for biased strand distribution p-value = 2.24e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 272 total aligned reads displayed.
ATTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTGCTACGGTCGAGAAACGCCAGCACATACAGCGCCAACATAAACGGAATTAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACACT‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTACTACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGAGCTACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGT > CP042583/1931262‑1931806
|||
aTTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACGCCAGCACATACAGCGCCAACATAAACGGAATTAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGaa < 2:937213/289‑1 (MQ=255)
acgacatccGGTATCAATCGGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGCAACGCCAGCACATACAGCGCCAACATAAACGGAATTAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATAc < 2:750560/282‑1 (MQ=255)
aaCCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACGCCAGCACATACAGCGCCAACATAAACGGAATTAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGAcc > 1:930862/1‑289 (MQ=255)
cccGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACGCCAGCACATACAGCGCCAACATAAACGGAATTAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGTAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCAt > 1:781010/1‑289 (MQ=255)
cccGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACGCCAGCACATACAGCGCCAACATAAACGGAATTAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCAt > 1:701/1‑289 (MQ=255)
aaTCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACGCCAGCACATACAGCGCCAACATAAACGGAATTAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGaa < 1:642957/289‑1 (MQ=255)
aTCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACGCCAGCACATACAGCGCCAACATAAACGGAATTAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGaa > 1:738832/1‑288 (MQ=255)
aGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACGCCAGCACATACAGCGCCAACATAAACGGAATTAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCa < 1:1116735/289‑1 (MQ=255)
aGGTCTGTTTGGCAAAACCGAGAGTCTAACGGTCGAGAAACTCCAGAAAATACAACGCCAACATAAACGGAATTAAACGCACACGGTTGTGCTTCACCCCGTCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAACTTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCa < 2:923386/289‑1 (MQ=255)
cTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACGCCAGCACATACAGCGCCAACATAAACGGAATTAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGa > 1:116391/1‑289 (MQ=255)
tttGGCAAAACCGATATTCGAACGGTCGAGAAACGCCAGCACATACAGCGCCAACATAAACGGAATTAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTTAGCa > 1:1515487/1‑289 (MQ=255)
gCAAAACCGATAATCGAACGGCCGAGAAACGCCAGCACATACAGCGCCAACATAAACGGAATTAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGaa < 2:1364753/288‑1 (MQ=255)
aaaaCCGATATTCGAACGGTCGAGAAACGCCAGCACATACAGCGCCAACATAAACGGAATTAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCg > 1:469920/1‑289 (MQ=255)
cGATATTCGAACGGTCGAGAAACGCCAGCACATACAGCGCCAACATAAACGGAATTAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCa < 1:1777526/289‑1 (MQ=255)
tattcgaaCGGTCGAGAAACGCCAGCACATACAGCGCCAACATAAACGGAATTAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAAc < 2:353975/282‑1 (MQ=255)
cGGTCGAGAAACGCCAGCACCATCATCGCCAACAAAAACGGAATTAAACGAACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACg < 2:1794734/289‑1 (MQ=255)
cGGTCGAGAAACGCCAGCACATACAGCGCCAACATAAACGGAATTAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCAGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACg < 1:1244121/289‑1 (MQ=255)
gTCGAGAAACGCCAGCACATACAGCGCCAACATAAACGGAATTAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCa > 2:1062233/1‑289 (MQ=255)
tCGAGAAACGCCAGCACATACAGCGCCAACATAAACGGAATTAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCa < 1:606312/288‑1 (MQ=255)
cGAGAAACGCCAGCACATACAGCGCCAACATAAACGGAATTAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATc > 1:1253782/1‑289 (MQ=255)
aaCGCCAGCACATACAGCGCCAACATAAACGGAATTAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGttga < 1:1267178/289‑4 (MQ=255)
aCGCCAGCAACTACAGCGCCAACATAAACGGAATTAAACGACAACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGttgaa < 2:107858/289‑5 (MQ=255)
cGCCAGCACATACAGCGCCAACATAAACGGAATTAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGttgaac > 1:1872626/1‑284 (MQ=255)
aCAGCGCCAACATAAACGGAATTAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTg > 2:1296555/1‑289 (MQ=255)
aCAGCGCCAACATAAACGGAATTAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTg > 1:185008/1‑289 (MQ=255)
gcCCACATAAACGGAATTAAACGCACACGGTTTTTCTTCACCGCGGCGGCAAGCAAAGCGGGGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGtcat < 2:1323206/289‑1 (MQ=255)
aaCATAAACGGAATTAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCGGTGCTCATCAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGCTTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑CTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCCAACTGCGGACGCCTCGGTGAACAATCCGGGCTGGGCATCAg > 2:375593/1‑289 (MQ=255)
aaCATAAACGGAATTAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAg > 1:382434/1‑289 (MQ=255)
cGGAATTAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCg > 2:12567/1‑288 (MQ=255)
aaTTAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGa > 1:1750592/1‑289 (MQ=255)
aTTAAACGCACACGTTTTTTCTTCACCACGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTACTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGaa < 2:325313/289‑1 (MQ=255)
tacaacacaaactgttttCTGCACCAGGGCGGCAAGCAAGGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATg < 2:961929/275‑1 (MQ=255)
tAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATg < 1:987606/289‑1 (MQ=255)
tAAACGCACACGGTTTTTCATCACCACGGCGTCAAGCAAAGCGGTGCTCATAAACAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGAGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATg < 2:1644056/289‑1 (MQ=255)
acacGGTTTTTCTTCACCACGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCACATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGCAATTCGCTGAATGGAGTagt > 2:1123191/1‑287 (MQ=255)
acacGGTTTTTCTTCACCACGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCACAATCGGGTCAAACTGCGGACGCCTCGTTGACCAATCCGGGCTGGTCATCAGGAAGTCCCTGAATGGAGTAtt > 2:121982/1‑289 (MQ=255)
agTTTTCCTTCACGTCGGCTGCAAGTAAATCGGTGGTCATAAAAAGCTCCTGAGAATATGTGTGCGTTACCGTTGCCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTTCAGTCACGATTGAGTTCGAGGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTg < 2:298442/288‑1 (MQ=255)
ttcttcACCACGGCGCAAAGAAAGGCGGTGCGCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTAACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGt < 2:1848121/289‑1 (MQ=255)
ttcttcACCACAGCGTAAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGGATAGGTGGGCGTTACCGTTGTCACAGTAACGCCCGGAGGGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATGCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGt < 2:781010/289‑1 (MQ=255)
ccacGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCAcc > 1:968918/1‑289 (MQ=255)
cacGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCg < 2:411892/289‑1 (MQ=255)
cacGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCg < 1:837260/289‑1 (MQ=255)
gTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATgg < 2:793243/288‑1 (MQ=255)
tCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTg < 1:301809/289‑1 (MQ=255)
cAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCGAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTga < 1:1194607/289‑1 (MQ=255)
cAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTg < 2:1696442/288‑1 (MQ=255)
cAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTg < 1:1677853/288‑1 (MQ=255)
cGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACa > 1:431159/1‑289 (MQ=255)
tGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATc > 1:438793/1‑265 (MQ=255)
tGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATc < 2:438793/265‑1 (MQ=255)
tCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACagacgaa < 1:717467/289‑5 (MQ=255)
aTAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGGGAAGGTGATCACCGCATGGTGAGAGTAAACagacgaac > 2:768180/1‑283 (MQ=255)
aagaaacTCCTGAGAATATGTGACAGTTACCGTTGCCACAGCAACGCCCGGAGAGGTTAGTGGCTGTAGGGACGTTTCAAATTGTAGTCACGATTGAGTTCAACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCGCCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACAGCGGGCGAATCGTTGAACAATCCGGGCTGGTCATCAAGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACAGCATGGTGAGAGTAAACagacgaaccgt < 2:903802/283‑9 (MQ=255)
aaGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCg > 1:51420/1‑289 (MQ=255)
ccTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTTAAGGTGATCACCGCATGGCGAGAGTAAACAGACGAACCGGTCGGcac > 2:264627/1‑288 (MQ=255)
ccTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGc < 1:1604996/255‑1 (MQ=255)
tatGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACACTCCGGGCTGGTCATCAGGCATTCGCTGAATGGCGTTTTGGGGAAGGTGATCCCCGCCTGGTGCGAGTAAACAGACGCACCGTGCCGcacgcgcagtt > 2:226700/1‑280 (MQ=255)
tgtgGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGc > 1:1710542/1‑288 (MQ=255)
gtgGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGc > 1:1600467/1‑195 (MQ=255)
gtgGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGc < 2:1600467/195‑1 (MQ=255)
gtgGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTgg > 2:657237/1‑228 (MQ=255)
gtgGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCg < 2:1541149/273‑1 (MQ=255)
gtgGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTTcc > 1:1405586/1‑288 (MQ=255)
gtgGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGcc > 1:1145436/1‑288 (MQ=255)
gtgGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGcc > 1:794196/1‑288 (MQ=255)
gtgGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGcc > 2:1675458/1‑288 (MQ=255)
gggCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAAATGCGGATGCATCGCTGAATCATCCGGGCTGGTAATCAGGAATTCGCTGAATGGCGTATTGGGTAAGGTTATCACCGACAGGTGAGGGTAAACAGAAGACCCGTGCGGCAACACCAGTTGccca > 2:241913/1‑287 (MQ=255)
cGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACGGA‑TGTATGAATACGACCATTCACCGGAACCGGCCCATTGAGCAGAATCGAGTCAAACTGCGGACGCATCGGTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGGACCACCAGTTGCCCCCTgg > 1:1057582/1‑289 (MQ=255)
ttACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGAt > 1:1345653/1‑289 (MQ=255)
aCCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTg > 1:1286461/1‑221 (MQ=255)
aaCGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCa < 1:1474283/288‑1 (MQ=255)
gCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAAtt > 2:1771714/1‑288 (MQ=255)
aGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTccacc > 2:471984/1‑288 (MQ=255)
gcttcggggCTGTAGGGCAGTTTCAAATTGCAGTGACAATTGCATTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCGCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAAGCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGc < 2:1458876/281‑1 (MQ=255)
gATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGc < 2:1732617/288‑1 (MQ=255)
gATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGc < 2:51625/288‑1 (MQ=255)
tAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTgg > 1:204893/1‑289 (MQ=255)
ggCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAATAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCggtgtgaa > 2:63463/1‑282 (MQ=255)
ggCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATg > 1:339419/1‑177 (MQ=255)
ggCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATgg < 1:143542/206‑1 (MQ=255)
ggCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATgg > 2:143542/1‑206 (MQ=255)
ggCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTa < 1:179032/288‑1 (MQ=255)
gTAGGGGCGTTTGAAATTGCAGTAACGATTGAGTTCTACAGCAAAACCGGGGTTATCAAGC‑CATTGGTTATTAATACTAACATTCACCGTAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGGGGAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCATCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAacca < 2:1515487/289‑1 (MQ=255)
gTAGGGGCGTTTCAAATTGCAGTCACGATTGATTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAacca < 1:304657/289‑1 (MQ=255)
gTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCCATTGCGGCAATTTCCACCAGCGTGGGTAAacc > 2:1716441/1‑288 (MQ=255)
gggCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCg > 2:695111/1‑288 (MQ=255)
gCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCa < 1:1296555/288‑1 (MQ=255)
gCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCa < 1:1187409/288‑1 (MQ=255)
tttCAAATTGCAGTCACGCTTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATCCGACCATTCACCGGAACCGGCCCATTGAGCAGAATCGGGCCAAACTGCGGAGTCATCGTCGAACAATCCAGGCTGGTCATCAGGAATTCGCTTAATGGCGTATTGGTGAAGGTGAGCACCGCATGGTGAGAGTAAAACGACGAACCGTTCGGGCCCACCAGTTGCCCCCTGGATTTTGCGATTCCGGCAAGTTTAACCAGCGTGGTTAACCCACCccacca > 2:1872473/1‑288 (MQ=255)
tttCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACg > 1:1088776/1‑120 (MQ=255)
tttCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCa > 1:891181/1‑288 (MQ=255)
tttCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATAAAGCACTTA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTTGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGTACCGTGCGGCACCATCAGTTGCCCCCTGTATTTGACGATTTGGGCCATTTCAACCATCGTTGTTAAACCccaccacca > 2:453748/1‑288 (MQ=255)
tGCAGTCACGATTGAGTTCAACGCCAAATCCGGGTTTATCCAGCACTAA‑TTTTTGAAGACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATc < 2:1405586/289‑1 (MQ=255)
cACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCgg < 1:505177/286‑1 (MQ=255)
cACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCgg < 2:1345653/286‑1 (MQ=255)
ttGAGTTCGCGGCCAAAACCGGGTTTATCAATAACTGA‑TTTATGAATACAACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGTAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATa < 2:1204925/288‑1 (MQ=255)
cGCCAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGAATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGTCAATTTCCACCAGCGTGGTTAAACCACCGCACCCGGCAACATCCGGCTGCACAATGTccaacc > 2:57222/1‑283 (MQ=255)
gCCAAAACCGGGTTTATCAAGCAATGA‑TTTATGAATACGTCCACTCACCGGAACCGGCTCATTGAGCAGAAGCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCg < 1:770483/289‑1 (MQ=255)
cAAAACCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGt < 1:260431/289‑1 (MQ=255)
aaCCGGGTTTATCAAGCACTGA‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCgg < 2:671600/265‑1 (MQ=255)
|||
ATTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTGCTACGGTCGAGAAACGCCAGCACATACAGCGCCAACATAAACGGAATTAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCGGTGCTCATAAAAAGCTCCTTAGAATATGTGGGCGTTACCGTTGTCACAGCAACGCCCGGAGTGATTAGTGGCTGTAGGGGCGTTTCAAATTGCAGTCACGATTGAGTTCGACGCCAAAACCGGGTTTATCAAGCACACT‑TTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTACTACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGAGCTACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGT > CP042583/1931262‑1931806
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
