Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,948,623 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,948,6230GC98.9% 192.5 / NA 87intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (50/36);  total (50/37)
Fisher's exact test for biased strand distribution p-value = 4.25e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,948,6240CG98.8% 192.5 / NA 87intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (49/36);  total (50/37)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,948,6250TA98.9% 199.8 / NA 87intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base A (50/36);  total (50/37)
Fisher's exact test for biased strand distribution p-value = 4.25e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

ATGGCGGCAAGCGTTGCGCCATTATTGTTGCTGCGCAGCGCCACCAGCTCCCGGCGTTGATCGTCATTGAGACTGGCAAAAACAGGCTGTTGATACCAGTCGGCAAATACCGCCGTTAACGGTTCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑GCTGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCGCTACCACCGTGACCTGGGAGATCAACATACAACCGACTGTAGTCGGCAAACGCCTCGCCCACTTCTTGCCATTCGTGGCAATCGCCGGAAAAACCGTGCAAAAACACCAGCCAGGGTAAACCTGGTTTTCCGTGTTTTGCCTGCGCGTGCAGGATCATAAATGGCTTACCTGCGCCAGA  >  CP042583/1948345‑1948901
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                    
aTGGCGGCAAGCGTTGCGCCATTATTGTTGCTGCGCAGCGCCACCAGCTCCCGGCGTTGATCGTCATTGAGTGAGGCAAAAACAGGCTGTTGATACCAGTCGGCAAATACCGCCGTTAACGGTTCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCcca                                                                                                                                                                                                                                                                              <  1:1880293/289‑1 (MQ=255)
              tGCGCCATTATTGTTGCTGCGCAGCGCCACCAGCTCCCGGCGTTGATCGTCATTGAGTGAGGCAAAAACAGGCTGTTGATACCAGTCGGCAAATACCGCCGTTAACGGTTCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCa                                                                                                                                                                                                                                                                >  1:1039671/1‑289 (MQ=255)
                     ttttggtggctgcCCAGCGCACCCAGCTCCCGTAGTTGATCGTTATTGAGTGAGGCAAAAACGGGCTGTTGATACCATTCGGCAAGTACCGGCGTTAACGGTTCTGTGAGAAAACGGTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCAGCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGAtgt                                                                                                                                                                                                                                                         <  2:1426593/281‑1 (MQ=255)
                     ttattGTTGCTGCGCAGCGCCACCAGCTCCCGGCGTTGATCGTCATTGAGTGAGGCAAAAACAGGCTGTTGATACCAGTCGGCAAATACCGCCGTTAACGGTTCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGAtgt                                                                                                                                                                                                                                                         >  2:1410337/1‑289 (MQ=255)
                             gctgcGCAGCGCCACCAGCTCCCGGCGTTGATCGTCATTGAGTGAGGCAAAAACAGGCTGTTGATACCAGTCGGCAAATACCGCCGTTAACGGTTCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCCCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCACAAGCAAAGGATGTTGtaacta                                                                                                                                                                                                                                                 >  2:175758/1‑289 (MQ=255)
                               tgcGCAGCGCCACCAGCTCCCGGCGTTGATCGTCATTGAGTGAGGCAAAAACAGGCTGTTGATACCAGTCGGCAAATACCGCCGTTAACGGTTCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGtaactaa                                                                                                                                                                                                                                                >  2:745031/1‑288 (MQ=255)
                                gcgcAGCGCCACCAGCTCCCGGCGTTGATCGTCATTGAGTGAGGCAAAAACAGGCTGTTGATACCAGTCGGCAAATACCGCCGTTAACGGTTCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAAcc                                                                                                                                                                                                                                              >  2:1675682/1‑289 (MQ=255)
                                gcgcAGCGCCACCAGCTCCCGGCGTTGATCGTCATTGAGTGAGGCAAAAACAGGCTGTTGATACCAGTCGGCAAATACCGCCGTTAACGGTTCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAG‑CCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCa                                                                                                                                                                                                                                             >  1:1552380/1‑289 (MQ=255)
                                 cgcAGCGCCACCAGCTCCCGGCGTTGATCGTCATTGAGTGAGGCAAAAACAGGCTGTTGATACCAGTCGGCAAATACCGCAGTTAACGGTTCAGTTCGAAAACGCTGCATCCATT‑GGCGATCGGGACGATGACGTTCCGCTCGTTGGTCAGCATTTTGCAGCCCCGCATGCCCGCCTTCGACCATAACCCCCCAAACCCCCGCCAGCCCCTGTCAAGCCGCAACCATCTCCACCCGCCCACCACC‑CCAGCACCCCACCACCCAGAAGTCAAGCATGCTTTAACTAAcc                                                                                                                                                                                                                                              >  2:1196145/1‑288 (MQ=255)
                                  gcAGCGCCACCAGCTCCCGGCGTTGATCGTCATTGAGTGAGGCAAAAACAGGCTGTTGATACCAGTCGGCAAATACCGCCGTTAACGGTTCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCa                                                                                                                                                                                                                                             <  1:1675682/288‑1 (MQ=255)
                                   cAGCGCCACCAGCTCCCGGCGTTGATCGTCATTGAGTGAGGCAAAAACAGGCTGTTGATACCAGTCGGCAAATACCGCCGTTAACGGTTCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGCAACTAACCAAg                                                                                                                                                                                                                                           >  1:1870498/1‑289 (MQ=255)
                                     gcgcCACCAGCTCCCGGCGTTGATCGTCATTGAGTGAGGCAAAAACAGGCTGTTGATACCAGTCGGCAAATACCGCCGTTAACGGTTCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGt                                                                                                                                                                                                                                         <  1:1850345/289‑1 (MQ=255)
                                      cgcCACCAGCTCCCGGCGTTGATCGTCATTGAGTGAGGCAAAAACAGGCTGTTGATACCAGTCGGCAAATACCGCCGTTAACGGTTCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGtaactaac                                                                                                                                                                                                                                               <  1:1070447/282‑1 (MQ=255)
                                      cgcCACCAGCTCCCGGCGTTGATCGTCATTGAGTGAGGCAAAAACAGGCTGTTGATACCAGTCGGCAAATACCGCCGTTAACGGTTCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCACCCAGAAGTCAAGGATGTTGtaactaac                                                                                                                                                                                                                                               >  2:1070447/1‑282 (MQ=255)
                                       gcCACCAGCTCCCGGCGTTGATCGTCATTGAGTGAGGCAAAAACAGGCTGTTGATACCAGTCGGCAAATACCGCCGTTAACGGTTCTGTGAGAAACCGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAATCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGtt                                                                                                                                                                                                                                        <  2:746722/288‑1 (MQ=255)
                                                tCCCGGCGTTGATCGTCATTGAGTGAGGCAAAAACAGGCTGTTGATACCAGTCGGCAAATACCGCCGTTAACGGTTCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCa                                                                                                                                                                                                                                 <  1:660320/286‑1 (MQ=255)
                                                tCCCGGCGTTGATCGTCATTGAGTGAGGCAAAAACAGGCTGTTGATACCAGTCGGCAAATACCGCCGTTAACGGTTCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGt                                                                                                                                                                                                                               <  1:1410337/288‑1 (MQ=255)
                                                         tGATCGTCATTGAGTGAGGCAAAAACAGGCTGTTGATACCAGTCGGCAAATACCGCCGTTAACGGTTCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTg                                                                                                                                                                                                                      >  1:139662/1‑288 (MQ=255)
                                                               tCATTGAGTGAGGCAAAAACAGGCTGTTGATACCAGTCGGCAAATACCGCCGTTAACGGTTCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGAcatca                                                                                                                                                                                                                >  1:682790/1‑288 (MQ=255)
                                                                   tgagtgaggCAAAAACAGGCTGTTGATACCAGTCGGCAAATACCGCCGTTAACGGTTCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCaaa                                                                                                                                                                                                           >  2:1329133/8‑289 (MQ=255)
                                                                          ggCAAAAACAGGCTGTTGATACCAGTCGGCAAATACCGCCGTTAACGGTTCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAAACAAGGTTTTAAGCAGTAAGTCGGTGACATCATCAAATCAATCg                                                                                                                                                                                                    >  1:1386967/1‑289 (MQ=255)
                                                                          ggCAAAAACAGGCTGTTGATACCAGTCGGCAAATACCGCCGTTAACGGTTCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCCCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAATGCAAGGATGTTGTAACCAACCCAGGTTTTACGCAGTAAGTCGGTGACCTCCCCAAATCCaac                                                                                                                                                                                                     >  2:993844/1‑286 (MQ=255)
                                                                          ggCAAAAACAGGCTGTTGATACCAGTCGGCAAATACCGCCGTTAACGGTTCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAACCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCg                                                                                                                                                                                                    >  1:664171/1‑289 (MQ=255)
                                                                                            aTACCAGTGCGCAAATACCGCCTTTAACGGTTCTGTGAGACAACTCTGCACCCCTT‑GGCGCTAGGAACGCTGACGTTCCTCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCCCAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCAAGAAGTCACGGATGTTGCAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCTACGCTAATcgccgccgaa                                                                                                                                                                                  <  2:1386967/289‑5 (MQ=255)
                                                                                                   tCGGCAAATACCGCCGTTAACGGTTCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGCCAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCCGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATcgccgccgaatcaccgt                                                                                                                                                                           >  1:495436/1‑278 (MQ=255)
                                                                                                   tCGGCAAATACCGCCGTTAACGGTTCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGt                                                                                                                                                                           >  1:1542562/1‑289 (MQ=255)
                                                                                                     ggCAAATACCGCCGTTAACGGTTCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCAACCAAG‑CGAGTACCCCACCAGCCAGAAGAAAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGAAATCATCAAATCCATCGCCGCTAATagcctacgaaccaccgtg                                                                                                                                                                          >  2:1253643/1‑274 (MQ=255)
                                                                                                          aTACCGCCGTTAACGGTTCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTgc                                                                                                                                                                    >  2:180937/1‑288 (MQ=255)
                                                                                                          aTACCGCAGTTAACGGTTCTGGGAGAAAACGCTGCACCCAGT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTgg                                                                                                                                                                    <  2:390933/289‑1 (MQ=255)
                                                                                                             acgccgGTAACGGTTTTGTGGGCAACCGGTGCAACCGTTGGGCGTACAG‑ACGCAGACGTTACCCACGTTGTACAGCCTTTTGTCGCCGCGGATGCCCGCCGTTGAGAATAACCCCGCAAAGCCCCGCCAGCCCCGGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGGTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGgag                                                                                                                                                                 <  2:111653/288‑1 (MQ=255)
                                                                                                               gccgTTAACGGTTCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGAt                                                                                                                                                               <  1:1329133/289‑1 (MQ=255)
                                                                                                               gccgTTAACGGTTCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGAt                                                                                                                                                               <  1:1858340/289‑1 (MQ=255)
                                                                                                               gccgTTAACGGTTCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGAt                                                                                                                                                               <  1:391830/289‑1 (MQ=255)
                                                                                                               gccaTTAACGGCTCTGTGAGAAAACGCGTCACCAATT‑GCAGTTCGTAACGCTGACGCTCCGCACGTTGTTCAGCATTGCGCAGCGCCGGATGCCCGCCTTAGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGAt                                                                                                                                                               <  2:495436/289‑1 (MQ=255)
                                                                                                                ccgTTTACGGTGCTGGGAGAAAAGGCTGAACCCGTG‑GGCCATCGGAACGCTGAAGTGCCGAACGTTGTTCAGCATTGGGCAGCCCAGGGTGGCGGCATTCGACCATAACCCCACAATGCCCCGCCAGCACCTGGCAAGCCGCCATCATCGCCACACGTCCACCAAG‑CGAGTAGCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCGAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGAt                                                                                                                                                               <  2:1055104/288‑1 (MQ=255)
                                                                                                                   ttAACGGTTCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGAt                                                                                                                                                               >  1:31428/1‑285 (MQ=255)
                                                                                                                   ttAACGGTTCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGAt                                                                                                                                                               <  2:31428/285‑1 (MQ=255)
                                                                                                                      aCGGTTCTGTGAGAAAACGCTGCCCCCATG‑GGCGGTCGGAACGCGGACGTTCCGCCCGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATa                                                                                                                                                        <  2:1039671/289‑1 (MQ=255)
                                                                                                                      aCGGTTCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCCCAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATa                                                                                                                                                        <  1:453468/289‑1 (MQ=255)
                                                                                                                        ggTACTGGGAGAAAACGCGGCCCCCATG‑GGCGACCAGAACGCTGACATTCCGAACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACGATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACa                                                                                                                                                      <  2:1153138/289‑1 (MQ=255)
                                                                                                                           tCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATa                                                                                                                                                        >  2:1855292/1‑284 (MQ=255)
                                                                                                                           tCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATa                                                                                                                                                        <  1:1855292/284‑1 (MQ=255)
                                                                                                                           tCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAAcc                                                                                                                                                   >  1:1909670/1‑289 (MQ=255)
                                                                                                                             tgtgAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGTAGATCAACCAACAACCgt                                                                                                                                                 >  2:832036/1‑288 (MQ=255)
                                                                                                                             tgtgAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCgt                                                                                                                                                 >  1:300200/1‑288 (MQ=255)
                                                                                                                                 agaAAACGCGTGACCCAGT‑AGAGATCGGACCGCGGACGTTCCGCAGGTGGTTCATAAGTGTGCAGCCCCGGAGTCCCGCCGTCGACAGTAACCCCAAAAAGCCCCGCCAGTCCCGGGCCAGCCTCCATTATCGCCACCCGTACACCAAT‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCCAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCgtgag                                                                                                                                              <  2:1757706/288‑5 (MQ=255)
                                                                                                                                               cccttgggCGAGCGGAACGGTGACGTTCCGCGCGTGATGCAGCCTTCGCCAG‑CCCGGATGCCCCCCTTCGAAGATCACCCCACAAATCCCCGCCAGCCCCTGGCAAGCCGACATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGcc                                                                                                                               <  2:1552380/283‑1 (MQ=255)
                                                                                                                                                 aTT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCTTGACCTGGGAGCTCAATATACCACCGTGAGTAAGCGACAAACGccc                                                                                                                              >  2:1761198/1‑287 (MQ=255)
                                                                                                                                                       cGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCCCCAGCCAGAAGTCAAGGATGTTGTAACTAAACAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCCCCGCCGAACCACCGTTACCTGGGAGAACAACATACAACCGTGAGTACTCGGCAACcgccccgccc                                                                                                                         >  2:978019/1‑288 (MQ=255)
                                                                                                                                                         aTCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAG‑CCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCAACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGCCTCGCCCAct                                                                                                                      >  1:1216571/1‑288 (MQ=255)
                                                                                                                                                              aaCGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGCCTCGCCCActtctt                                                                                                                  >  1:260241/1‑288 (MQ=255)
                                                                                                                                                                     aCGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGCCTCGCCCACTTCTTGCCATTCg                                                                                                          >  1:1081991/1‑289 (MQ=255)
                                                                                                                                                                     aCGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGACCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGCAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGCCTCGCCCACTTCTTGCCATTCg                                                                                                          >  2:220736/1‑289 (MQ=255)
                                                                                                                                                                                            tttGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGCCTCGCCCACTTCTTGCCATTCGTGGCAATCGCCGGAAAAACCGt                                                                                    >  1:27920/1‑288 (MQ=255)
                                                                                                                                                                                            tttGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGCCTCGCCCACTTCTTGCCATTCGCTGCCATCGCCGGAAAAACCGt                                                                                    >  2:604325/1‑288 (MQ=255)
                                                                                                                                                                                            tttGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCCGCAAACGCCCCGCCCACTTCTTGCCATTCTTGGCAACGGCCGGAAAAACCGt                                                                                    >  2:708990/1‑288 (MQ=255)
                                                                                                                                                                                                   ccacgctaccccGCGTTAGACACTAACCCCACAAAGCCGCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCGGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAAGCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGCCTCGCCCACTTCTTGCCATTCGTGGCAATCGCCGG‑AAAACCGTGCAAAAaca                                                                           <  2:1909670/280‑1 (MQ=255)
                                                                                                                                                                                                    cccGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGCCTCGCCCACTTCTTGCCATTCGTGGCAATCGCCGGAAAAACCGTGCAAAAaca                                                                           <  1:993844/289‑1 (MQ=255)
                                                                                                                                                                                                    cccGGATGCCCGCCTCAGACAATAACCCCACAGAGCCCCCCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGCCTCGCCCACTTCTTGCCATTCGTGGCAATCGCCGGAAAAACCGTGCAAAAaca                                                                           <  2:300200/289‑1 (MQ=255)
                                                                                                                                                                                                        gATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGCCTCGCCCACTTCTTGCCATTCGTGGCAATCGCCGGAAAAACCGTGCAAAAACAcca                                                                        >  2:158564/1‑288 (MQ=255)
                                                                                                                                                                                                          tGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGCCTCGCCCACTTCTTGCCATTCGTGGCAATCGCCGGAAAAACCGTGCAAAAACAccagcc                                                                     <  1:429939/289‑1 (MQ=255)
                                                                                                                                                                                                          tGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGCCTCGCCCACTTCTTGCCATTCGTGGCAATCGCCGGAAAAACCGTGCAAAAACAccagc                                                                      <  1:175758/288‑1 (MQ=255)
                                                                                                                                                                                                                            aCCCCACAAAGCCCCCCCAGCCCCCGGAAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGCCTCGCCCACTTCTTGCCATTCGTGGCAATCGCCGGAAAAACCGTGCAAAAACACCAGCCAGGGTAAACCTGGTTTTc                                                   <  2:27920/289‑1 (MQ=255)
                                                                                                                                                                                                                             ccccACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGCCTCGCCCACTTCTTGCCATTCGTGGCAATCGCCGGAAAAACCGTGCAAAAACACCAGCCAGGGTAAACCTGGTTTTcc                                                  >  1:1689852/1‑289 (MQ=255)
                                                                                                                                                                                                                                  caAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGCCTCGCCCACTTCTTGCCATTCGTGGCAATCGCCGGAAAAACCGTGCAAAAACACCAGCCAGGGTAAACCTGGTTTTCCGTGtt                                             >  2:86632/1‑289 (MQ=255)
                                                                                                                                                                                                                                       acccGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGCCTCGCCCACTTCTTGCCATTCGTGGCAATCGCCGGAAAAACCGTGCAAAAACACCAGCCAGGGTAAACCTGGTTTTCCGTGTTTTGcc                                        <  1:220736/288‑1 (MQ=255)
                                                                                                                                                                                                                                        cccGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGCCTCGCCCACTTCTTGCCATTCGTGGCAATCGCCGGAAAAACCGTGCAAAAACACCAGCCAGGGTAAACCTGGTTTTCCGTGTTTTg                                          >  1:311834/1‑286 (MQ=255)
                                                                                                                                                                                                                                        cccGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGCCTCGCCCACTTCTTGCCATTCGTGGCAATCGCCGGAAAAACCGTGCAAAAACACCAGCCAGGGTAAACCTGGTTTTCCGTGTTTTGcc                                        >  2:721977/1‑288 (MQ=255)
                                                                                                                                                                                                                                         ccGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCAACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTTGGAGCTCAACATACAACCGTCAGTACTCGGCAAACGCCTCTCCCACTTCTTGCCATTCGTGGCAATCGCCCGCAAAACCGTGCACAACCACCAGCCAGGGTAAACATGGTTTCCCGGGTTTTGCCt                                       >  2:1647301/1‑288 (MQ=255)
                                                                                                                                                                                                                                          ccccAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCCAGCGATG‑ACCCCACCAGACAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGCCTCGCCCACTTCTTGCCATTCGTGGCAATCGCCGGAAAAACCGTGCAAAAACACCAGCCAGGGTAAACCTGGTTTTCCGTGTTTTGCCTgc                                     <  2:139662/287‑1 (MQ=255)
                                                                                                                                                                                                                                           gCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGCCTCGCCCACTTCTTGCCATTCGTGGCAATCGCCGGAAAAACCGTGCAAAAACACCAGCCAGCGTAAACCTGGTTTTCCGCGTTTTTCCTgc                                     >  2:1890159/1‑288 (MQ=255)
                                                                                                                                                                                                                                             cAGCCGCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGCCTCGCCCACTTCTTGCCATTCGTGGCAATCGCCGGAAAAACCGTGCAAAAACACCAGCCAGGGTAAACCTGGTTTTCCGTGTTTTGCCTGcgcg                                  <  1:30949/289‑1 (MQ=255)
                                                                                                                                                                                                                                                ccccTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCACACGCCCCGCCCACTTCTTGCCATTCGTGGCAATCGCCGGAAAAACCGTGCAAACACCACAGCCATGTTACAACGGGCTTTCCGTGTTTTCCCTGCGCGtc                                >  2:1329952/1‑287 (MQ=255)
                                                                                                                                                                                                                                                ccccTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGCCTCGCCCACTTCTTGCCATTCGTGGCAATCGCCGGAAAAACCGTGCAAAAACACCAGCCAGGGTAAACCTGGTTTTCCGTGTTTTGCCTGCGCGTGc                               <  1:721977/289‑1 (MQ=255)
                                                                                                                                                                                                                                                 cccTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGCCTCGCCCACTTCTTGCCATTCGTGGCAATCGCCGGAAAAACCGTGCAAAAACACCAGCCAGGGTAAACCTGGTTTTCCGTGTTTTGCCTGCGCGTGCa                              <  1:1253643/289‑1 (MQ=255)
                                                                                                                                                                                                                                                    tGGCAAGCCGCCATCCTCGCCACCCGTCCACCAAT‑CGAGTACCCCACCAGCCAGAAGGCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGCCTCGCCCACTTCTTGCCATTCGTGGCAATCGCCGGAAAAACCGTGCAAAAACACCAGCCAGGGTAAACCTGGTTTTCCGTGTTTTGCCTGCGCGTGCAGGa                           <  2:629105/289‑1 (MQ=255)
                                                                                                                                                                                                                                                    tGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCACACGCCTCGCCCACTTCTTGCCATTCGTGGCAATCGCCGGAAAAACCGTGCAAAAACACCAGCCACGTTAAACCCGGTTTTCCGTGTTTTTCTTgccccgcgagga                           >  2:1124360/1‑279 (MQ=255)
                                                                                                                                                                                                                                                    tGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGCCTCGCCCACTTCTTGCCATTCGTGGCAACCGCCGGAAAAACCGTGCAAAAACACCAGCCAACGTAAACCTGGTTTTCCAGGTTTTCCCCGCGCCTGCAggt                           >  2:30949/1‑288 (MQ=255)
                                                                                                                                                                                                                                                          gccgccATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGCCTCGCCCACTTCTTGCCATTCGTGGCAATCGCCGGAAAAACCGTGCAAAAACACCAGCCAGGGTAAACCTGGTTTTCCGTGTTTTGCCTGCGCGTGCAGGATCATaa                     >  1:912510/1‑289 (MQ=255)
                                                                                                                                                                                                                                                           ccgccATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGCCTCGCCCACTTCTTGCCATTCGTGGCAATc                                                                                                  >  2:500008/1‑211 (MQ=255)
                                                                                                                                                                                                                                                           ccgccATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGCCTCGCCCACTTCTTGCCATTCGTGGCAATc                                                                                                  <  1:500008/211‑1 (MQ=255)
                                                                                                                                                                                                                                                           ccgccATCATCGCCACCCGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGCCTCGCCCACTTCTTGCCATTCGTGGCAATCGCCGGAAAAACCGTGCAAAAACACCAGCCAGGGTAAACCTGGTTTTCCGTGTTTTGCCTGCGCGTGCAGGATCATaaa                    >  1:207504/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                           ccGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGCCTCGCCCACTTCTTGCCATTCGTGGCAATCGCCGGAAAAACCGTGCAAAAACACCAGCCAGGGTAAACCTGGTTTTCCGTGTTTTGCCTGCGCGTGCAGGATCATAAATGGCTTACCTGCGCCa    >  1:1878039/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                           ccGTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGGGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGCCTCGCCCACTTCTTGCCATTCGTGGCAATCGCCGGAAAAACCGTGCAAAAACACCAGCCAGGGTAAACCTGGTTTTCCGTGTTTTGCCTGCGCGTGCAGGATCATAAATGGCTTACCTGCGCCa    <  1:1196145/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                             gTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGCCTCGCCCACTTCTTGCCATTCGTGGCAATCGCCGGCAAAACCGTGCAAAAACACCAGCCAGGGTAAACCGGGTTTTCCGTGTTTTGCCTGCGCGTGCAGGATCATACATGGCTTCACTGCGCCAGa  >  2:615962/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                             gTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCCGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAAACGCCTCGCCCACTTCTTGCCATTCGTGGCAATCGCCGGAAAAACCGTGCAAAAACACCAGCCAGGGTAAACCTGGTTTTCCGTGTTTTGCCTGCGCGTGCAGGATCATa                      >  1:300726/1‑269 (MQ=255)
                                                                                                                                                                                                                                                                             gTCCACCAAG‑CGAGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGACGAACCACCGTGACCTGGGAGATCAACATACAACCGTGAGTAGTCGGCAACCGCCTCGCCCACTTCTTGCCATTCGTGGCAATCGCAGGAAAAACCGTGCAAAAACCCCAGCCAGGGTAAAACTGGTTTTCCGGTATTTGCCTGACCGTTCAGGATCATAAATGGCTTACCTgcgcagga  >  2:57348/1‑285 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                    
ATGGCGGCAAGCGTTGCGCCATTATTGTTGCTGCGCAGCGCCACCAGCTCCCGGCGTTGATCGTCATTGAGACTGGCAAAAACAGGCTGTTGATACCAGTCGGCAAATACCGCCGTTAACGGTTCTGTGAGAAAACGCTGCACCCATT‑GGCGATCGGAACGCTGACGTTCCGCACGTTGTTCAGCATTTTGCAGCCCCGGATGCCCGCCTTCGACAATAACCCCACAAAGCCCCGCCAGCCCCTGGCAAGCCGCCATCATCGCCACCCGTCCACCAAG‑GCTGTACCCCACCAGCCAGAAGTCAAGGATGTTGTAACTAACCAAGGTTTTACGCAGTAAGTCGGTGACATCATCAAATCCATCGACGCTAATCGCCGCGCTACCACCGTGACCTGGGAGATCAACATACAACCGACTGTAGTCGGCAAACGCCTCGCCCACTTCTTGCCATTCGTGGCAATCGCCGGAAAAACCGTGCAAAAACACCAGCCAGGGTAAACCTGGTTTTCCGTGTTTTGCCTGCGCGTGCAGGATCATAAATGGCTTACCTGCGCCAGA  >  CP042583/1948345‑1948901

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A