Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F210 I1 R1
|
4929 |
268.4 |
3907572 |
96.3% |
3762991 |
273.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
564,199 |
3 bp→TGA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 564,199 | 0 | A | T | 98.7%
| 529.8
/ NA
| 229 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (95/130); minor base G (2/1); total (97/132) |
| Fisher's exact test for biased strand distribution p-value = 5.76e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 564,200 | 0 | C | G | 99.1%
| 531.4
/ NA
| 229 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base G (95/131); minor base A (2/0); total (97/132) |
| Fisher's exact test for biased strand distribution p-value = 1.80e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
| * | CP042583 | 564,201 | 0 | T | A | 99.6%
| 544.8
/ NA
| 229 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base A (96/131); total (97/132) |
| Fisher's exact test for biased strand distribution p-value = 4.25e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 229 total aligned reads displayed.
GCGGACTCGATGATGACATCAAGACATTCGTCCAGCGTCTGGTTGCGTTTCAGGGTAATCATCTGGGAGCGGGGGATCATGATGTCGCGAACGCGTTGGTCTGCGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGACTATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTCGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTT > CP042583/563921‑564475
|||
gCGGACTCGATGATGACATCAAGACATTCGTCCAGCGTCTGGTTGCGTTTCAGGGTAATCATCTGGGAGCGGGGGATCATGATGTCGCGAACGCGTTGGTCTGCGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTgtcg < 1:77022/288‑1 (MQ=255)
aCTCGATGATGACATCAAGACATTCGTCCAGCGTCTGGTTGCGTTTCAGGGTAATCATCTGGGAGCGGGGGATCATGATGTCGCGAACGCGTTGGTCTGCGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGc > 2:1218242/1‑288 (MQ=255)
tgatgaCATCAAGACATTCGTCCAGCGTCTGGTTGCGTTTCAGGGTAATCATCTGGGAGCGGGGGATCATGATGTCGCGAACGCGTTGGTCTGCGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGc < 2:1255382/289‑1 (MQ=255)
tgatgaCATCAAGACATTCGTCCAGCGTCTGGTTGCGTTTCAGGGTAATCATCTGGGAGCGGGGGATCATGATGTCGCGAACGCGTTGGTCTGCGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TG‑TGATTGTCGTCGCTCAT‑GGcg < 1:473471/289‑1 (MQ=255)
agttggcATCACGAACTTCGTCCCACGTCTTGTTGCGTTTCAGGGTAATCGACTGGGAGCGGGGGGTCCTGGTGTTGCGACCGCGTTGGTCTGTAATGTCCCTCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑gg < 2:587366/282‑1 (MQ=255)
gaCATCAAGACATTCGTCCAGCGTCTGGTTGCGTTTCAGGGTAATCATCTGGGAGCGGGGGATCATGATGTCGCGAACGCGTTGGTCTGCGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATCAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGcgtcg > 1:1765757/1‑289 (MQ=255)
gaCATCAAGACATTCGTCCAGCGTCTGGTTGCGTTTCAGGGTAATCATCTGGGAGCGGGGGATCATGATGTCGCGAACGCGTTGGTCTGCGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGcgtcg > 1:1720352/1‑289 (MQ=255)
aCATCAAGACATTCGTCCAGCGTCTGGTTGCGTTTCAGGGTAATCATCTGGGAGCGGGGGATCATGATGTCGCGAACGCGTTGGTCTGCGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGGGTAA‑CAGGGAGAAAAACCCCTTCTTGTTGCTTATCGTGTCACTAT‑CG‑TGTGAATTGTCGTCGCTCAT‑GCcgtcgt > 2:1298199/1‑289 (MQ=255)
aCATCAAGACATTCGTCCAGCGTCTGGTTGCGTTTCAGGGTAATCATCTGGGAGCGGGGGATCATGATGTCGCGAACGCGTTGGTCTGCGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTTTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGctgcgg > 2:1423849/1‑284 (MQ=255)
atacggacctgcttCCGGCGTCTGGTTGCGTTTCTGAGTAATCATGTGGGTGCGGGGGATCATGATGTCGCGAACGCCTTGGTCTGCGCTGTCCATCACCCTTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCTGCGCCTGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGATAAGTTGGGTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTAt < 2:509915/276‑1 (MQ=255)
cAAGACATTCGTCCAGCGTCTGGTTGCGTTTCAGGGTAATCATCTGGGAGCGGGGGATCATGATGTCGCGAACGCGTTGGTCTGCGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCCACGTGGAACAGTTGGCTGAGTAG‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTACTTG‑TGGAT‑TTGTCGTCGCACAT‑GGCGTCGTagtg > 2:738691/1‑286 (MQ=255)
aCATTCGTCCAGCGTCTGGTTGCGTTTCAGGGTAATCATCTGGGGGCGGGGGATCATGATGTCGCGAACGCGTTGGTCTGCGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGtt < 2:721384/288‑1 (MQ=255)
cATTCGTCCAGCGTCTGGTTGCGTTTCAGGGTAATCATCTGGGAGCGGGGGATCATGATGTCGCGAACGCGTTGGTCTGCGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGtt < 1:1411280/287‑1 (MQ=255)
cATTCGTCCAGCGTCTGGTTGCGTTTCAGGGTAATCATCTGGGAGCGGGGGATCATGATGTCGCGAACGCGTTGGTCTGCGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGtt < 2:527903/287‑1 (MQ=255)
tCGTCCAGCGTCTGGTTGCGCTTCAGGGTAATCATCTGGGAGCGGGGGATCATGATGTCGCGAACGCGTTGGTCTGCGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCAt > 1:656270/1‑289 (MQ=255)
cGTCCAGCGTCTGGTTGCGTTTCAGGGTAATCATCTGGGAGCGGGGGATCATGATGTCGCGAACGCGTTGGTCTGCGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATg < 1:972411/289‑1 (MQ=255)
tCCAGCGTCTGGTTGCGTTTCAGGGTAATCATCTGGGAGCGGGGGATCATGATGTCGCGAACGCGTTGGTCTGCGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGCCGTATGGGTTCTCATgtt > 1:423276/1‑289 (MQ=255)
cAGGGTCTGGTTGCGTTTCAGGGTAATCATCTGGGAGCGGGGGATCATGATGTCGCGAACGCGTTGGTCTGCGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATgttag < 1:1138190/289‑1 (MQ=255)
cGTCTGGTTGCGTTTCAGGGTAATCATCTGGGAGCGGGGGATCATGATGTCGCGAACGCGTTGGTCTGCGATGTCTATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATgttagtta > 2:276904/1‑289 (MQ=255)
tttCAGGGTAATCAGCTGTGGCCAGGGGATAATGTTTTCGCTAACGCGTTGGTCTGCGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCcg < 2:1830211/289‑1 (MQ=255)
ggTAATCATCTGGGAGCGGGGGATCATGATGTCGCGAACGCGTTGGTCTGCGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTATTCAAAACGCCGTCGTTa > 1:1083932/1‑289 (MQ=255)
gTAATCATCTGGGAGCGGGGGATCATGAGGTCGCGAACGCGTTGGTCTGCGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTa < 2:458946/288‑1 (MQ=255)
aaTCATCTGGGAGCGGGGGATCATGATGTCGCGAACGCGTTGGTCTGCGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAAt < 1:1116430/288‑1 (MQ=255)
tcatcTGGGAGCGGGGGATCATGATGTCGCGAACGCGTTGGTCTGCGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCa > 1:26879/1‑288 (MQ=255)
tGGGAGCGGGGGATCATGATGTCGCGAACGCGTTGGTCTGCGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAAcg > 1:976839/1‑289 (MQ=255)
ggAGCGGGGGATCATGATGTCGCGAACGCGTTGGTCTGCGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAAcggc > 2:189490/1‑289 (MQ=255)
gggATCATGATGTCGCGAACGCGTTGGTCTGCGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCTTCGCTCAT‑GGCGTCGTATGGGTTCTGCTGTCAGTTAATAAAAACGCCGTCGTTAATCCCCATCGGCGGGGACg > 2:8636/1‑289 (MQ=255)
gggATCATGATGTCGCGAACGCGTTGGTCTGCGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGcg > 2:326794/1‑228 (MQ=255)
gggATCATGATGTCGCGAACGCGTTGGTCTGCGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGcg < 1:326794/228‑1 (MQ=255)
tCATGATGTCGCGAACGCGTTGGTCTGCGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTg < 2:26879/289‑1 (MQ=255)
caggatgTCGCGAACCCGTTGGTCTGCAATGTCCCTCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGc < 2:39917/286‑1 (MQ=255)
cATGATGTCGCGAACGCGTTGGTCTGCGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGc < 1:1519099/289‑1 (MQ=255)
tgTCGCGAACGCGTTGGTCTGCGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTc > 1:39917/1‑289 (MQ=255)
tCGCGAACGCGTTGGTCTGCGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCaa > 2:1173198/1‑289 (MQ=255)
cgcgAACGCGTTGGTCTGCGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTCGGGTTC‑CCGGGGGAAAGTTGGCTGGGGAACCAGGGGGAAAATCCCTTTTTTGTGGCTTATCGGTTCAC‑AC‑TGTTGGAATTTGTC‑TTGCCCATGGGCGTCGTTGGGTTTCCAATGTTGGTTAATC‑AAACGGCGCCGTTAAACCACCACGGGGGGGGCGGCTGTCACTCtaaa > 2:1135998/1‑288 (MQ=255)
cGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGATTTGTCGTCGCTACT‑GGCGTCGTATGGGTTCTTATTTTAGTTAATCTAAACGCCGTACTTAATCACCAACGGCGGGGACGTGTGCCAGACAAATTCCCGGCAAagtatctt > 2:1013518/1‑286 (MQ=255)
tGTCTATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTAttcttt < 1:276904/288‑1 (MQ=255)
tGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTAttctt > 1:84860/1‑287 (MQ=255)
tCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATTCCTGGCAAATTTATCTTtctc > 2:1461655/1‑289 (MQ=255)
tCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTtctc > 1:36378/1‑289 (MQ=255)
tCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCCCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCCGTCAAATGCCTGGCAAATTATTCTTtctc > 1:1654543/1‑289 (MQ=255)
cATCGCCCCTTTGAGCATATCGCGCTTATGTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCgg < 2:1083932/289‑1 (MQ=255)
tCACCCCTTCGGGGATATCGCGCGTATCTTCTTCGATAAGGTCGTTCTGCCCGGAAGCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCa < 2:36378/289‑1 (MQ=255)
tCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCa < 1:1848692/289‑1 (MQ=255)
ccTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTa < 1:822766/289‑1 (MQ=255)
cTTCGAGCATATCGCGGGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCCCGGCTCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAACGTTGGCTGAGTAA‑CAGGGCGAACAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAAGTGTCGTTGCTCAT‑GGCGTCGTCGGGGTTCTCATGTTAGTTAATCAAGACGCCGTCGTTAATCACCTACGGCGGGCGCGTGTGCCCGTCAAATGCCTGGCAAATTTTTCTGTCTCGGTAATGtcc > 2:231460/1‑287 (MQ=255)
cTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCcgtcgt > 2:1360187/1‑222 (MQ=255)
cTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCcgtcgt < 1:1360187/222‑1 (MQ=255)
cTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTAc > 2:941353/1‑289 (MQ=255)
cTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTAc > 2:962146/1‑289 (MQ=255)
tCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTtct > 2:438916/1‑193 (MQ=255)
gAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGAt < 1:1218242/289‑1 (MQ=255)
gAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTACCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGAt < 1:373186/289‑1 (MQ=255)
tatCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCa < 1:1013518/289‑1 (MQ=255)
catCGCGCGTAACTTCGTCGATAAGGTCGTTATGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTAACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCa < 2:1443205/288‑1 (MQ=255)
atCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGAt > 2:953210/1‑283 (MQ=255)
atCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGAt < 1:953210/283‑1 (MQ=255)
atCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCCTGGCAATGTACGGATCCGCAt > 1:156687/1‑289 (MQ=255)
tCGGGCGTATCGTCGTCGATAAGGTCGTTCTGCCCGGAAGCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGGTTGCTGAGTAA‑CAGGGAGAAAATTCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCa < 2:633405/287‑1 (MQ=255)
cgcgcgTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCCACCAGGCAAATGCCCGGCAAATTATTCTTTCTCGGCAATGGACGGAACCTCATa > 2:373186/1‑288 (MQ=255)
gcgTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCgg < 1:1164414/266‑1 (MQ=255)
gcgTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCATAGcc < 1:337519/288‑1 (MQ=255)
gcgTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCATAGcc < 1:50156/288‑1 (MQ=255)
cgTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCATAGcc < 1:198226/287‑1 (MQ=255)
cgTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCATAGcc > 2:198226/1‑287 (MQ=255)
cgTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAAAGGCGGGGACGGCTGCCAGGCAAACGCCTGGCAAATTTTTCATTCGTGGCAATGTTCGGAt > 2:1192770/1‑277 (MQ=255)
cgTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGGTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTTGCAAATTTTTCTTTTTCGGACATGTACGGGTCTTCACAGaccc > 2:1049984/1‑288 (MQ=255)
cgTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTAGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGGCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCCCGGCAATGTACGGATCCTCATAGcc > 1:1798047/1‑287 (MQ=255)
accttctgcaaTACGGGCGTTCTGCCCGGAACCACGGATCAGAGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCATAGCCCagag < 1:1049984/279‑1 (MQ=255)
cgATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAGATTATTCTTTCTCGGCAATGTACGGATCCTCATAGCCCAGAGCAAGCAt < 1:1015808/288‑1 (MQ=255)
tAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCATAGCCCAGAGCAAGCATAAtc < 1:1173198/289‑1 (MQ=255)
ttCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTc > 1:1737558/1‑289 (MQ=255)
cagcagTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTCGAGGGCTTCCATTTCTTCTGCTTCGt < 1:1059171/289‑1 (MQ=255)
ttCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTCGAGGGCTTCCATTTCTTCTGCTTCGTCATCtt < 2:1737558/289‑1 (MQ=255)
cGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGAt < 2:170025/221‑1 (MQ=255)
cGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGAt > 1:170025/1‑221 (MQ=255)
cACGGTTTTTCGGTTCACCGTGGAAAGGTTGGCTGAGTAA‑CAGGGAGTATAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAGCGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTCGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGAtg < 2:823926/289‑1 (MQ=255)
cACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTCGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGAtg < 1:1461655/289‑1 (MQ=255)
tGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTCGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAAt > 1:549185/1‑288 (MQ=255)
aaaaGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGc > 1:750224/1‑184 (MQ=255)
ttGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGCCAAATGCCTGGCAAATTCTTCTTTCTCGGCAATTTACGGATCCTCATAGCCCAGAGCAAACATAATCTCTGTTTCGAGGGCTTCCATTTCTTCTTCTTCGTCATCCTCGATGGTATCTTACCCTAACAAAttccaactg > 2:700134/1‑280 (MQ=255)
ttgCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTCGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGcc < 2:1206153/287‑1 (MQ=255)
tGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTCGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGcc < 1:525466/289‑1 (MQ=255)
ggCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGGCGTCTGCCAGTCAAATGCCTGGCACATTATTCTTTCTCGGCAATGTACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTTTTTCTAGGGCTTCACTTTCTTCTGCTTCGTCATCTTCGATGTGATCGTACCCTAACAAATGCGAACTGc > 2:1093527/1‑287 (MQ=255)
ggCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTCGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCg > 1:1318116/1‑289 (MQ=255)
tGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTCGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTg < 1:72987/288‑1 (MQ=255)
tGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTCGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTg < 1:587245/288‑1 (MQ=255)
tGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTCGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGc < 1:962146/289‑1 (MQ=255)
aGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTCGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGca > 1:1911935/1‑288 (MQ=255)
gTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCTCCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTCGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGcac < 1:925209/288‑1 (MQ=255)
aGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTCGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGCTGTGATCGTAACCTAACAAATGCAGACTCCCGTTCaccaccct > 2:33725/1‑287 (MQ=255)
agaAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTCGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATgc > 1:1490487/1‑289 (MQ=255)
agaAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTCGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTACCGTGCACCACCATATgc > 1:155031/1‑289 (MQ=255)
aaacTCCCTTCTGGTTGCGTAACGTGTCACTAC‑GG‑TGTGAATTTTGGTCGCTCTG‑GGCGTCGTATGGGTGCTCATGTTAGTTAATCAAAACGCCGTCGTTACTCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTCGAGGGCTTCCATTTCTTCTGCTGCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGcc < 2:1722061/289‑1 (MQ=255)
tCCCTGCTTGTTGCTTATCGGGTCAGTTC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATAAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTCGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGt < 2:423276/289‑1 (MQ=255)
cccTTCTTGTTGCTTATCTTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTCGAGGGCTTCCATTTCTTCTGCTTCGTCATCCTCGATGTGATCGTAACCTAACAAATGCAGACTGCAGTGCACCACCATATGCGCCCAGTg < 1:1190613/289‑1 (MQ=255)
ccTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTCGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTgc < 2:1776820/289‑1 (MQ=255)
gCTTATCGTGTCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTCGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTg > 1:690737/1‑289 (MQ=255)
gtgtCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTCGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGcc < 1:618499/289‑1 (MQ=255)
tCACTAC‑TG‑TGTGAATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTCGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGccc < 2:769636/264‑1 (MQ=255)
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GCGGACTCGATGATGACATCAAGACATTCGTCCAGCGTCTGGTTGCGTTTCAGGGTAATCATCTGGGAGCGGGGGATCATGATGTCGCGAACGCGTTGGTCTGCGATGTCCATCACCCCTTCGAGCATATCGCGCGTATCTTCGTCGATAAGGTCGTTCTGCCCGGAATCACGGATCAGCGCCAGCAGTTCGTCACGGTTTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAA‑CAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTAC‑TG‑TGACTATTGTCGTCGCTCAT‑GGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGTACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTCGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTT > CP042583/563921‑564475
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
