Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 571,130 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583571,1300AT99.6% 587.3 / NA 246intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (78/167);  minor base G (0/1);  total (78/168)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583571,1310CG99.6% 580.3 / NA 246intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (78/167);  minor base T (0/1);  total (78/168)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP042583571,1320TA99.6% 581.5 / NA 246intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (78/167);  minor base C (0/1);  total (78/168)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 246 total aligned reads displayed.

CGGGCTGCGTATTTCTTGGTGATAGCGGAAATAATACTGGAATCCAGACCACCAGAAAGCAGCACACCGTAAGGCACATCAGACATCAGATGGCTTTTAACACTATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCACTGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCACTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCACCGTTTACCGCCAGTACG  >  CP042583/570852‑571400
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                            
cGGGCTGCGTATTTCTTGGTGATAGCGGAAATAATTGAGGAATCCAGACCACCAGAAAGCAGCACACCGTAAGGCACATCAGACATCAGATGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACAt                                                                                                                                                                                                                                                                      <  1:1834122/289‑1 (MQ=255)
              tgtggtggtgacGGAAATAAATGAGGAATCCAGACCACCCGAAAGCAGCACACCGGAAGGCACATCCGACATCAGATGGCTTTTAACTGAATCTTCCAGTGCCTGGCGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCgtgt                                                                                                                                                                                                                                                        <  2:1150839/278‑1 (MQ=255)
              cTTGGTGATAGCGGAAATAATTGAGGAATCCAGACCACCAGAAAGCAGCACACCGTAAGGCACATCAGACATCAGATGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGCATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCgtgt                                                                                                                                                                                                                                                        <  1:1210823/289‑1 (MQ=255)
              cTTGGTGATAGCGGAAATAATGGAGGAATCCAGACCACCAGAAAGCAGCACAACGTAAGGCACATCAGACATCAGATGGCGTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTGTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCgtgt                                                                                                                                                                                                                                                        <  1:710203/289‑1 (MQ=255)
                    gagaGCGCAAAGAATTCAGCAATCCAGGCCGCCAAAAAGCAGTACACCATAAGGCACATCAGACATCAGATGGCTTTTAACTGATCCTTCCAGGGCCTCACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAAC‑GATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCAt                                                                                                                                                                                                                                                 <  2:1645784/286‑1 (MQ=255)
                    gATAGCGGAAATAATTGAGGAATCCAGACCACCAGAAAGCAGCACACCGTAAGGCACATCAGACATCAGATGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTc                                                                                                                                                                                                                                                   <  1:1018269/288‑1 (MQ=255)
                    aaTAGCGGAAATAATTGCGAAAGCCAGCCCACCAGAAAGCAGCGAACCGTAAGGCACATCAGACATCAGATTGCTTTTGACTGAATCTGCCAGTGACTGACACAGCTCGTTTTTGTCAGTCAAGTTATCTTTCACCGCCTCGTAGTCGAACCGGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTc                                                                                                                                                                                                                                                   <  2:1215624/287‑1 (MQ=255)
                     tgaGCGGAAATAATTAAGGAATCCAGACGACCGTAAAGCAGCAAACCGTAAGGCAAATCAGACATCAGATGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTAACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCAt                                                                                                                                                                                                                                                 <  2:915137/287‑1 (MQ=255)
                      tAGCGGAAATAATTGAGGAATCCAGACCACCAGAAAGCAGCACACCGTAAGGCACATCAGACATCAGATGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCAt                                                                                                                                                                                                                                                 <  1:1145562/288‑1 (MQ=255)
                      tAGCGGAAATAATTGAGGAATCCAGACCACCAGAAAGCAGCACACCGTAAGGCACATCAGACATCAGATGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCAt                                                                                                                                                                                                                                                 <  2:1578804/288‑1 (MQ=255)
                      tAGCGGAAATAATTGAGGAATCCAGACCACCAGAAAGCAGCACACCGTAAGGCACATCAGACATCAGATGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCAt                                                                                                                                                                                                                                                 <  1:871099/288‑1 (MQ=255)
                      tAGCGGAAATAATTGAGGAATCCAGACCACCAGAAAGCAGCACACCGTAAGGCACATCAGACATCAGATGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCAt                                                                                                                                                                                                                                                 <  2:36845/288‑1 (MQ=255)
                      tAGCGGAAATAATTGAGGAATCCAGACCACCAGAAAGCAGCACACCGTAAGGCACATCAGACATCAGATGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCAt                                                                                                                                                                                                                                                 <  1:584538/288‑1 (MQ=255)
                      tAGCGGAAATAATTGAGGAATCCAGACCACCAGAAAGCAGCACACCGTAAGGCACATCAGACATCAGATGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCAt                                                                                                                                                                                                                                                 <  1:628856/288‑1 (MQ=255)
                      tAGCGGAAATAATTGAGGAATCCAGACCACCAGAAAGCAGCACACCGTAAGGCACATCAGACATCAGATGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCAt                                                                                                                                                                                                                                                 <  1:861674/288‑1 (MQ=255)
                      tAGCGGAAATAATTGAGGAATCCAGACCACCAGAAAGCAGCACACCGTAAGGCACAGAAGACATCAGATGGCTTTTAACTGAATAGTCCAGTGCCTGAAGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCAACGCATCGTAGTCGAAACAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTCGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTGGAATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCAt                                                                                                                                                                                                                                                 <  1:438340/288‑1 (MQ=255)
                      tAGCGGAAATAATTGAGGAATACAGCCAACCAGAAAGCAGAACACCGTAAGGCGAATCAGACATCTGTTGGCTTTTAACTGAATCTTCCAGTGCCTGACGCGGCTGGTTTTTGTCGGTCACGTTATCTTGCACCGCGTCGTAGTCGAACCAGTCGCGATGATAGTAAGATCGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCC‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCAt                                                                                                                                                                                                                                                 <  2:1302364/288‑1 (MQ=255)
                           gAAATAATTGAGGAATCCAGACCACCAGAAAGAAGCACACCGTAAGGCCCATCAGACATCAGATGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATAcccc                                                                                                                                                                                                                                            <  1:1664359/288‑1 (MQ=255)
                             aataattgaggAATCCAGACCACCAGAAAGCAGCACACCGTAAGGCACATCAGACATCAGATGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCata                                                                                                                                                                                                                                         <  2:610095/280‑1 (MQ=255)
                             aataattgaggAATCCAGACCACCAGAAAGCAGCACACCGTAAGGCACATCAGACATCAGATGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCata                                                                                                                                                                                                                                         <  2:1655249/280‑1 (MQ=255)
                             aataattgaggAATCCAGACCACCAGAAAGCAGCACACCGTAAGGCACATCAGACATCAGATGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCata                                                                                                                                                                                                                                         <  1:394064/280‑1 (MQ=255)
                             aataattgaggAATCCAGACCACCAGAAAGCAGCACACCGTAAGGCACATCAGACATCAGATGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCat                                                                                                                                                                                                                                          <  1:196420/279‑1 (MQ=255)
                               taattgaggAATCCAGACCACCAGAAAGCAGCACACCGTAAGGCACATCAGACATCAGATGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCAtata                                                                                                                                                                                                                                       <  1:11145/282‑1 (MQ=255)
                               taattgaggAATCCAGACCACAAGAAAGCAGCACTCCGTAAGGCACATCAGACATCAGATGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCAtata                                                                                                                                                                                                                                       <  1:1132779/282‑1 (MQ=255)
                               taattgagaaaTCCAGCCCACAAGAAAGCAGCACACCGTAAGGCACATCAGACATCAGATGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCAtata                                                                                                                                                                                                                                       <  1:1749477/280‑1 (MQ=255)
                               taatggaggAATCCCGGACACCAGAAAGCACCACACCTTAAGGCACATCCGACATGAGATGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTGGGTCACGTTATCTTTAACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTGTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCAtata                                                                                                                                                                                                                                       <  2:1352795/282‑1 (MQ=255)
                                 attgaggAATCCCGACCACCAGAAAGCAGCACACCGTAAGGCACATCAGACATCAGATGGCTTTTAACTGACGCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCTGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACa                                                                                                                                                                                                                                     <  2:180556/284‑1 (MQ=255)
                                       gaagacAGACCACCAGAAAGCAGCAAACCGTAAGGAACAGCAGACATCAGATGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGAGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTggg                                                                                                                                                                                                                                <  2:678420/283‑1 (MQ=255)
                                        aaTCCAGACCACCAGAAAGCAGCACACCGTAAGGCACATCAGACATCAGATGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGga                                                                                                                                                                                                                               <  2:1296053/288‑1 (MQ=255)
                                        aaTCCAGACCACCAGAAAGCAGCACACCGTAAGGCACATCAGACATCAGATGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGga                                                                                                                                                                                                                               <  1:65941/288‑1 (MQ=255)
                                        aaTCCAGACCACCAGAAAGCAGCACACCGTAAGGCACATCAGACATCAGATGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGga                                                                                                                                                                                                                               <  1:1621564/288‑1 (MQ=255)
                                           ccAGACCCACAGAAATCAGCACACCGTAAGGCACATCAGACATCAGATGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGTGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGgatgat                                                                                                                                                                                                                           <  2:1072221/289‑1 (MQ=255)
                                                             gcaCACCGTAAGGCACATCAGACATCAGATGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGAcc                                                                                                                                                                                                         >  2:110147/1‑289 (MQ=255)
                                                              cacaCCGTAAGGCACATCAGACATCAGATGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCa                                                                                                                                                                                                        >  1:99827/1‑289 (MQ=255)
                                                                cacctgcaGGCACATTAGACATCAGATGTCTTTTAACGGACTCTTCCAGTGCCTGCCGCAGCTCGTTTTGGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCACGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGTACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAAt                                                                                                                                                                                                      <  1:1243465/282‑1 (MQ=255)
                                                                   cGTAAGGCACATCAGACATCAGATGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGa                                                                                                                                                                                                                    <  1:1599607/272‑1 (MQ=255)
                                                                           acatcagacatcagATGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCa                                                                                                                                                                                            >  1:1259783/1‑288 (MQ=255)
                                                                             atcagacatcagaTGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATCCAGCTGACCGTTTTCGTCATACCCCATATACAGTGGGATGATCCCCAACTGGTCGCGACCACACAGGTAGGCATCt                                                                                                                                                                                         >  2:1917543/1‑289 (MQ=255)
                                                                             atcagacatcagaTGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACAGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCt                                                                                                                                                                                         >  1:293419/1‑289 (MQ=255)
                                                                               cagacatcagaTGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAACTAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACCGGCACCAGCG‑CTTTCATTTCTGAGGTCACATACATCTGACCGTGTTCGTCATACCCCATAAACAGTGGGATGCTCCCCAGACGGTCGCGACCAATCAGATAGGCATCgtt                                                                                                                                                                                       >  2:879689/1‑289 (MQ=255)
                                                                                   catcagaTGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCttttt                                                                                                                                                                                     <  1:1501927/287‑1 (MQ=255)
                                                                                   catcagaTGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCttttt                                                                                                                                                                                     <  1:528329/287‑1 (MQ=255)
                                                                                   catcagaTGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCttttt                                                                                                                                                                                     <  1:611231/287‑1 (MQ=255)
                                                                                   catcagaTGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCttttt                                                                                                                                                                                     <  1:1245988/287‑1 (MQ=255)
                                                                                   catcagaTGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCg                                                                                                                                                                                   <  1:411523/289‑1 (MQ=255)
                                                                                   catcagaTGGCTTTTAAATGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGGTAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCttttt                                                                                                                                                                                     <  1:428356/287‑1 (MQ=255)
                                                                                      cagaTGGCTTTTAACTGAATCTTCCATGGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTg                                                                                                                                                                                <  1:84475/289‑1 (MQ=255)
                                                                                      cagaTGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCCTCTTTTTCGCtt                                                                                                                                                                                >  2:973423/1‑288 (MQ=255)
                                                                                      cagaTGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTg                                                                                                                                                                                <  1:654193/289‑1 (MQ=255)
                                                                                      cagaTGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTg                                                                                                                                                                                <  2:1026371/289‑1 (MQ=255)
                                                                                       agaTGGCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCAt                                                                                                                                                                                                                                                 <  2:654554/223‑1 (MQ=255)
                                                                                           ggCTTTTAACTGAAGTTTCCAGGGCCTGACGCAGCTCCGTATTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCACTCGCGATGATAGCAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCCCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTTGCACCAGCG‑CTTTCATTTCTTAGGCCACATACAGCTGAGCGTGTTCGTCATACCCCATATACTGTGGGATGATCCCCAGATGGTCGCGACCAGTCAGGTAGGCATCTTTTTCGCTGTCGTa                                                                                                                                                                           <  2:762516/289‑1 (MQ=255)
                                                                                            gCTTTTAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCAt                                                                                                                                                                                                                                                 >  2:810536/1‑218 (MQ=255)
                                                                                              ttttAACTGAATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGa                                                                                                                                                                                                                                                              <  1:919222/203‑1 (MQ=255)
                                                                                                  aactgattCTTCAAGTGCCGGGCGCCGCTCTTTTTGGTCGGTAAAGTTATCTTTCACCGCGTCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCCCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCa                                                                                                                                                                    <  2:1244955/282‑1 (MQ=255)
                                                                                                        aTCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGACCGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTTATCGTCATACCCCATATACAGTGGGATGATCCTCAGATGGTCGCGACCAATCCGGTAGGCACATTTTTCGTCGTCGTACAGTGCAAAGGCa                                                                                                                                                              >  2:295897/1‑289 (MQ=255)
                                                                                                                 tGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGcc                                                                                                                                                      >  1:277893/1‑288 (MQ=255)
                                                                                                                   ccTGACGAAGCTCGTTTTTTTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGTTGATCGTAAGAACGGATTTCGCCGTCCTGGCTCCCCAAATAGCTCCCCGCCGGGAACTCTTTAATCGTTCGGCAAACTGGCACCAGCG‑CTTTCCTTTCTGAGGCCACTTACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCt                                                                                                                                                    >  2:927363/1‑288 (MQ=255)
                                                                                                                           aGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTc                                                                                                                                                                                                                                                   >  1:1402234/1‑185 (MQ=255)
                                                                                                                           aGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTc                                                                                                                                                                                                                                                   <  2:1402234/185‑1 (MQ=255)
                                                                                                                             cTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCg                                                                                                                                                                                   >  2:396248/1‑247 (MQ=255)
                                                                                                                                       tCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCAt                                                                                                                                                                                                                                                 >  1:1041183/1‑175 (MQ=255)
                                                                                                                                          gtaaCGTTATATTTCCCCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCACCGCCCTGGCTCCACAAATAGCCCCCCTCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGCGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGc                                                                                                                             <  2:469929/285‑1 (MQ=255)
                                                                                                                                            cACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCt                                                                                                                          <  1:907575/289‑1 (MQ=255)
                                                                                                                                             aCGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCtt                                                                                                                         <  1:1528705/289‑1 (MQ=255)
                                                                                                                                                     tttCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATATTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGa                                                                                                                 >  1:1898636/1‑289 (MQ=255)
                                                                                                                                                       tCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCtt                                                                                                                         >  2:429726/1‑279 (MQ=255)
                                                                                                                                                         aCCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACa                                                                                                             <  1:1448908/289‑1 (MQ=255)
                                                                                                                                                              aTCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATGCAgcgc                                                                                                         <  1:1553857/288‑1 (MQ=255)
                                                                                                                                                                          cacgTCGCGATGTAAGTAAGAACGGATTTCGCCGTCCGGGCTCCACAAATGGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCACTTca                                                                                            <  2:551772/286‑1 (MQ=255)
                                                                                                                                                                                    tgatAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCACTTCACAGTCAGAcc                                                                                  <  1:1009028/289‑1 (MQ=255)
                                                                                                                                                                                        aGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCgaga                                                                                                                                      >  1:1947956/1‑233 (MQ=255)
                                                                                                                                                                                        aGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCgaga                                                                                                                                      <  2:1947956/233‑1 (MQ=255)
                                                                                                                                                                                          tAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCACTTCACAGTCAGACCCgg                                                                               >  1:699821/1‑286 (MQ=255)
                                                                                                                                                                                           aaGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCACTTCACAGTCAGACCCGGTc                                                                             <  1:1917543/287‑1 (MQ=255)
                                                                                                                                                                                            aGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCACTTCACAGTCAGACCCGGTCTgg                                                                          <  1:1854979/289‑1 (MQ=255)
                                                                                                                                                                                                cGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCCCTTCACAGTCAGACCCGGTCCGGa                                                                         >  1:1175740/1‑286 (MQ=255)
                                                                                                                                                                                                 ggATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCa                                                                                                                                                                                                    >  2:1849126/1‑162 (MQ=255)
                                                                                                                                                                                                   aTTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAATTTCCGGCCTTTTTTCCTGATACAGCGCGAGGATAACTTCACAGTCAGACCCggcgcgcaacgtgt                                                                   >  2:1123499/1‑277 (MQ=255)
                                                                                                                                                                                                    tttCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCa                                                                                                                                                                                                        <  1:420849/155‑1 (MQ=255)
                                                                                                                                                                                                        gccgccCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCACTTCACAGTCAGACCCGGTCTGGAACTGGTAACGa                                                              <  1:1095045/289‑1 (MQ=255)
                                                                                                                                                                                                                     cacaAATGGCTCCCCGCCGGGAACTCTTTAACCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTTTTCGTCATACCCCATATACAGTGAGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCACTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTctg                                                 <  1:1291655/289‑3 (MQ=255)
                                                                                                                                                                                                                      acaAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCACTTCACAGTCAGACCCGGTCTgg                                                                          <  2:287663/263‑1 (MQ=255)
                                                                                                                                                                                                                      acaAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCAAATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCACCAGATGGTCGCGACCAATCAGGTAGGAATCTTTTTCGCTGTCGTACAGTGCAAATGCAAACCTGCCCTGCAAGTCGTCGCGCAATTCCGGCGCTTTTTCGTCATACAGCGCGAGGATCACTTCACACTCAGCCCAGGTGTGGAACCGGGAACGacaggcatgtcaggg                                                >  2:152966/1‑275 (MQ=255)
                                                                                                                                                                                                                          acaGCTCCCCACCGGGAAATTCTTCATCGTGCGGCAAACTGGCACCAGCG‑CTTTCAATTCTGAGGCCACATACAGCTGACCGTGTTCGTCATCCCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCACTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGgcgcgc                                            <  1:793674/287‑1 (MQ=255)
                                                                                                                                                                                                                          aTAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCACTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGgcgcgc                                            <  1:1647044/289‑1 (MQ=255)
                                                                                                                                                                                                                                   cgccgGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCACTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCtgg                                   >  2:168225/1‑289 (MQ=255)
                                                                                                                                                                                                                                   cgccgGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCACTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCtgg                                   >  1:480641/1‑289 (MQ=255)
                                                                                                                                                                                                                                          acctctTGAACCGGTCGGCAAACTGGCCACATAC‑CATTCATGTCTGAGGCCACATACAGCTGACCGTTTTCGTCATACCCCATATACAGTGTGTTGATCCCCAGATTGTCGCGACCAATCAGGGAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCACTTTACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGt                            <  2:1898636/287‑1 (MQ=255)
                                                                                                                                                                                                                                           aCTCTTTTATCGTGGGGACAACGGGC‑CCCGCGTCTTTCATTACGGAGGCCACATACCGCTGCCGGTGTTGGTCATGCCCCATATACAGTGGGATGCTCCCCCGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCACTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTa                           <  2:1746346/289‑1 (MQ=255)
                                                                                                                                                                                                                                           aCTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCACTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGt                            <  1:825253/288‑1 (MQ=255)
                                                                                                                                                                                                                                               tttAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCACTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGAtt                       <  1:269462/289‑1 (MQ=255)
                                                                                                                                                                                                                                                       tGCGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCACTTCACAGt                                                                                        >  2:238456/1‑216 (MQ=255)
                                                                                                                                                                                                                                                         cGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCACTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCACCGttt              >  1:136327/1‑288 (MQ=255)
                                                                                                                                                                                                                                                         cGGCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCACTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCACCGttt              >  2:182767/1‑288 (MQ=255)
                                                                                                                                                                                                                                                          ggCAAACTGGCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCACTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCACCGTTTa             <  1:1811392/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                   gCACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCACGTCGTCGAGAAACTCCGGCCCTTTTTCCTGATACAGCGCGAGGGTCACTTCACAGTCAGACCCGGTCTGGGACTGGTCACGATCGCCATATTCGGCGCGCCATCCCTGGGGGTTGTTGATTTCACCTTTTAcctcgcgtac   >  2:1711128/1‑281 (MQ=255)
                                                                                                                                                                                                                                                                    cACCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCACTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCACCGTTTACCGCCAGTACg  <  2:480641/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                     aCCAGCG‑CTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCACTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCACCGTTTACCGCCAGTACg  <  2:1779125/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                          cg‑cTTTCATTTCTGAGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCACTTCACAGTCAGAcc                                                                                  <  2:1256228/203‑1 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                            
CGGGCTGCGTATTTCTTGGTGATAGCGGAAATAATACTGGAATCCAGACCACCAGAAAGCAGCACACCGTAAGGCACATCAGACATCAGATGGCTTTTAACACTATCTTCCAGTGCCTGACGCAGCTCGTTTTTGTCGGTCACGTTATCTTTCACCGCATCGTAGTCGAACCAGTCGCGATGATAGTAAGAACGGATTTCGCCGTCCTGGCTCCACAAATAGCTCCCCGCCGGGAACTCTTTAATCGTGCGGCAAACTGGCACCAGCG‑CTTTCATTTCACTGGCCACATACAGCTGACCGTGTTCGTCATACCCCATATACAGTGGGATGATCCCCAGATGGTCGCGACCAATCAGGTAGGCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCACTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCACCGTTTACCGCCAGTACG  >  CP042583/570852‑571400

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A