Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F210 I1 R1
|
4929 |
268.4 |
3907572 |
96.3% |
3762991 |
273.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
572,621 |
3 bp→CGA |
intergenic (–/–) |
– / – |
–/– |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 572,621 | 0 | G | C | 99.6%
| 572.7
/ NA
| 244 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base C (111/131); total (112/132) |
| Fisher's exact test for biased strand distribution p-value = 4.61e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 |
| * | CP042583 | 572,622 | 0 | C | G | 99.6%
| 570.5
/ NA
| 244 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base G (111/131); total (112/132) |
| Fisher's exact test for biased strand distribution p-value = 4.61e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 |
| * | CP042583 | 572,623 | 0 | T | A | 99.6%
| 575.5
/ ‑5.8
| 244 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (111/132); minor base G (1/0); total (112/132) |
| Fisher's exact test for biased strand distribution p-value = 4.59e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 |
Only 100 of 244 total aligned reads displayed.
TTAGCGACGAAATAGGCTGCTTTATGCATCATGTCCCAGTTGTAGGAACGCGTTTCGCCAACAATCACGAAATCAGGGTTCACATCGGTAATAGTGAAACCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGGCTA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGCCACTATAAAAGCACATTAATTTTCCAGCAAATGCTGGAGCAAAATACCGTTGAGCATGGCGCGTTTTACCAGCGCAAAAGCGCCGATTGCGCTGCGGTGATCCAGCTCA > CP042583/572352‑572899
|||
ttAGCGACGAAATAGGCTGCTTTATGCATCATGTCCCAGTTGTAGGAACGCGTTTCGCCAACAATCACGAAATCAGGGTTCACATCGGTAATAGTGAAACCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCa > 2:977442/1‑289 (MQ=255)
gCGACGAAATAGGCTGCTTTATGCATCATGTCCCAGTTGTAGGAACGCGTTTCGCCAACAATCACGAAATCAGGGTTCACATCGGTAATAGTGAAACCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGTAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATCGGTGGTCAGCaaa > 2:214358/1‑287 (MQ=255)
tAGGCTGCTTTATGCATCATGTCCCAGTTGTAGGAACGCGTTTCGCCAACAATCACGAAATCAGGGTTCACATCGGTAATAGTGAAACCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCa < 1:354818/289‑1 (MQ=255)
tAGGCTGCTTTATGCATCATGTCCCAGTTGTAGGAACGCGTTTCGCCAACAATCACGAAATCAGGGTTCACATCGGTAATAGTGAAACCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCa < 1:634310/289‑1 (MQ=255)
ggCTGCTTTATGCATCATGTCCCAGTTGTAGGAACGCGTTTCGCCAACAATCACGAAATCAGGGTTCACATCGGTAATAGTGAAACCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCa < 1:1592327/287‑1 (MQ=255)
ggCTGCTTTATGCATCATGTCCCAGTTGTAGGAACGCGTTTCGCCAACAATCACGAAATCAGGGGTCACATCGGTAATAGTGAAACCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCTCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATACAACACGCTGTCAGGTAC‑ATCGACACCGGCTGTGGCTAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAG‑GGAGAGGTGGGCAGCGACACCAGAGGCAg > 2:793860/1‑288 (MQ=255)
cttttggCATCATGTCCAAGTTGGAGGAACGCGTTTCGCCACAAATCAGCAAATCAGGGTTCCCATCGGTAATAGTGAAACCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCttt < 2:1339640/283‑1 (MQ=255)
ctTTATGCATCATGTCCCAGTTGTAGGAACGCGTTTCGCCAACAATCACGAAATCAGGGTTCACATCGGTATTAGTGAAACCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCttt > 1:1470495/1‑289 (MQ=255)
ctTTATGCATCATGTCCCAGTTGTAGGAACGCGTTTCGCCAACAATCACGAAATCAGGGTTCACATCGGTAATAGTGAAACCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAACCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGAGAGTTGGTCAGCAACACCAGCGGCAGGCCttt > 2:375937/1‑289 (MQ=255)
tttATGCATCATGTCCCAGTTGTAGGAACGCGTTTCGCCAACAATCACGAAATCAGGGTTCACATCGGTAATAGTGAAACCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCttt < 1:868425/288‑1 (MQ=255)
tGCATCATGTCCCAGTTGTAGGAACGCGTTTCGCCAACAATCACGAAATCAGGGTTCACATCGGTAATAGTGAAACCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTTGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCa > 1:992411/1‑289 (MQ=255)
catGTCCCAGTTGTAGGAACGCGTTTCGCCAACAATCACGAAATCAGGGTTCACATCGGTAATAGTGAAACCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAAt > 2:709814/1‑288 (MQ=255)
catGTCCCAGTTGTAGGAACGCGTTTCGCCAACAATCACGAAATCAGGGTTCACATCGGTAATAGTGAAACCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTC‑GGCGACGGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTAACCATAAt > 1:683497/1‑288 (MQ=255)
ttGTAGGAACGCGTTTCGCCAACAATCACGAAATCAGGGTTCACATCGGTAATAGTGAAACCGGCTTTGTACAGTTCATGAATCAGTCCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGATGGTCAGAAACACCAGCGGCAGCCCTTCAACCATAATCACGTGCacaa > 2:1367464/1‑289 (MQ=255)
tAGGAACGCGTTTCGCCAACAATCACGAAATCAGGGTTCACATCGGTAATAGTGAAACCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAAt > 1:208239/1‑288 (MQ=255)
aGGAACGCGTTTCGCCAACAATCACGAAATCAGGGTTCACATCGGTAATAGTGAAACCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCCTTATCCCGAAACCCGGTCAAAAATTc > 2:45967/1‑289 (MQ=255)
aCGCTTTTCGCCAACAATCACGAAATCATGTTTCACATCCGTAATCGTGAAACCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCGCCCACCACATTCGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGATCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCt < 1:1750206/289‑1 (MQ=255)
aCGCGCTTCGCCAACAAGCACGAGAGCAGGGTTCACATCGGTAATAGTGAAACCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCt < 2:1178626/289‑1 (MQ=255)
cgcgTTTCGCCAACAATCACGAAATCAGGGTTCACATCGGTAATAGTGAAACCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCt > 2:510914/1‑288 (MQ=255)
cgcgTTTCGCCAACAATCACGAAATCAGGGTTCACATCGGTAATAGTGAAACCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCt > 1:192681/1‑288 (MQ=255)
gcgTTTCGCCAACAATCACGAAATCAGGGTTCACATCGGTAATAGTGAAACCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCGCCCACCACACACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTg > 1:1026340/1‑288 (MQ=255)
catttCGCCAACAATCACGAGATAGAGGTTCACATCGAGAATAGTCAAACCGGCGTTGTACGGTTCATGAATGCGTGCGCCTCCGCACACCACATACGCTTTCTTGCCTGCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAACACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCa < 2:1193194/287‑1 (MQ=255)
gTTTCGCCAACAATCACGAAATCAGGGTTCACATCGGTAATAGTGAAACCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCa < 1:1416867/288‑1 (MQ=255)
tttCGCCAACAATCACGAAATCAGGGTTCACATCGGTAATAGTGAAACCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCttt < 2:1922918/256‑1 (MQ=255)
ttCGCCAACAATCACGAAATCAGGGTTCACATCGGTAATAGTGAAACCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCAccc < 1:892283/289‑1 (MQ=255)
ttCGCCAACAATCACGAAATCAGGGTTCACATCGGTAATAGTGAAACCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCAcc < 1:1652023/288‑1 (MQ=255)
cACGAAATCAGGGTTCAAATCGGTAATAGTGAAACCGGCTGTGTACAGTTCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACg < 2:1714528/289‑1 (MQ=255)
aCGAAATCAGGGTTCACATCGGTAATAGTGAAACCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAATC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGt < 2:249735/289‑1 (MQ=255)
aTCAGGGTTCACATCGGTAATAGTGAAACCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCg > 2:398510/1‑289 (MQ=255)
gTTCACATCGGTAATAGTGAAACCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCGCCCTCCACATACGCTTACTTGCCTTCCAGGCGACGCAGGAAATCGGCAGTC‑GCCAGCGCAGAGCTATAAAACACGCTGTCAGGTAC‑ATCGGCACCTGCGGTGGCAAAGCTGTTCGCCAGTTCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAATATTCCGCTGCACCCGGTACGGCGACGTGATCGTGCAt < 1:1793782/288‑1 (MQ=255)
tAATAGTGAAACCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGt < 1:45967/288‑1 (MQ=255)
aTAGTGAAACCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACgg < 1:1325938/259‑1 (MQ=255)
aTAGTGAAACCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACgg > 2:1325938/1‑259 (MQ=255)
aaaCCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGc > 1:833148/1‑289 (MQ=255)
aCCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCaa > 1:825436/1‑289 (MQ=255)
ggTTCCTGAATCAGCGCGCCTCGGACACCCCCATACGCTTTCCTGCCTTGCTGGCGACGCAGGACATCGGCAGTC‑GCCATCGCAGAGGTAGAAAACACGCTGCCAGGTAC‑ATCGACACCTGAGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATCTCGCAAATTACATTTTTaa < 2:1563898/288‑1 (MQ=255)
cgTTCAGGAAGCGATGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTaa < 2:1780136/288‑1 (MQ=255)
gTTCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCAcc < 1:80005/229‑1 (MQ=255)
gTTCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCCACGTTATCGTGCATTAGCCAGCCGGCGATCTCGCCAATTACATTTTTAAt > 2:887558/1‑289 (MQ=255)
ttCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCCAGCCGTCGATATCGCAAACTACATTTTTAATg > 2:1056774/1‑289 (MQ=255)
tCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTaa < 1:1018037/286‑1 (MQ=255)
tCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTaa < 1:977442/286‑1 (MQ=255)
tCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTaa < 2:923359/286‑1 (MQ=255)
tCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTaa < 1:1554125/286‑1 (MQ=255)
tCAGGAATCAGTGCGCGTTCGCCCCCACCATACGCTTACTTGCCTTCCTGGCGACGCATGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACAGGCTGTCAGGTAC‑ATCGGCACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGAAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTaa < 2:66732/286‑1 (MQ=255)
aTCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATg < 1:1698808/288‑1 (MQ=255)
tacatGCCCCCTCGCCCACCACCTACGCTTTCCTGCCCTCCCGGCGACGCAAGGAATCGGGAGGCGGCCACGGCAGA‑GTTTTAAACACGGTGTCCGGGACAATCG‑CACCCGGGGGTGGAAAACGGTTCGCCAGATCCTGGCCCGTTTGCGAA‑AGGTAGTTGGTCCACAAAACCAAGGGGCGGGCTTTTTCCATAAACCCCTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGa < 2:349294/285‑1 (MQ=255)
tCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGa < 1:619369/289‑1 (MQ=255)
aGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTaa < 2:597480/277‑1 (MQ=255)
aGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACt > 2:147487/1‑289 (MQ=255)
aGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACt > 1:1054193/1‑289 (MQ=255)
tGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTa > 2:796183/1‑288 (MQ=255)
tgcccctCGTCCACCACAGAAGCGTTCGTGCCCTCCTAGCGACGCAGGAAATCGGCAGTA‑GCCCTCGCAGGGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACt < 2:151803/280‑1 (MQ=255)
cgcCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCCAATCGGTTCGCCAGATCTTGCCCAGTTTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATCATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTAccc < 2:906367/289‑1 (MQ=255)
caccacATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGa < 1:214358/289‑1 (MQ=255)
cacaTACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGc > 1:746215/1‑245 (MQ=255)
tACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAAt > 1:1762216/1‑289 (MQ=255)
ttCTTGCCTTCCTGGCGACGCAGGCAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAgcgc < 1:117765/289‑1 (MQ=255)
ttCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGCTATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAgcg > 2:1025841/1‑288 (MQ=255)
ttCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAgcgc < 2:753594/289‑1 (MQ=255)
tctggctgtCCGGGCGACGCAGGAAATCCGCAGTC‑GCAATCGCGGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGcc < 2:1103500/281‑1 (MQ=255)
tCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGcc < 1:1629005/289‑1 (MQ=255)
tCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTAc > 1:1349381/1‑233 (MQ=255)
aTCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGCCACTATAAAAGCACATTAATTTTCCAGCAAATGCTGGAg < 1:398510/289‑1 (MQ=255)
cGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGCCACTATAAAAGCACATTAATTTTCCAGCAAATGCTGGAGCa < 1:1118744/289‑1 (MQ=255)
agagGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCTGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGACTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGCCACTATAAAAGCACATTAATTTTCCAGCAAATGCTGGAGCaaa < 1:317704/288‑1 (MQ=255)
agGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGCCACTATAAAAGCACATTAATTTTCCAGCAAATGCTGGAGCAAAATa > 2:936362/1‑289 (MQ=255)
agGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGATTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGCCACTATAAAAGCACATTAATTTTCCAGCAAATGCTGGAGCAAAAt > 1:706491/1‑288 (MQ=255)
ggTATAAAAAACGCTGTACGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGCCACTATAAAAGCACATTAATTTTCCAGCAAATGCTGGAGCAAAATa < 2:1568817/288‑1 (MQ=255)
cacGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGCCACTATAAAAGCACATTAATTTTCCAGCAAATGCTGGAGCAAAATACCGTTGAGCa > 1:930667/1‑289 (MQ=255)
cGCTGTCAGGTAT‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTaa > 2:196674/1‑192 (MQ=255)
cGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCCAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGCCACTATAAAAGCACATTAATTTTCCAGCAAATGATGGAGCAAAATACCGTTGAGCATg > 1:574377/1‑289 (MQ=255)
cGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGa < 1:1222308/202‑1 (MQ=255)
cGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGCCACTATAAAAGCCCATTAATTTTCCAGCAAATGCTGGAGCAAAATCCCGTTTAGCATg > 2:1913545/1‑289 (MQ=255)
cGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGCCACTATAAAAGCACATTAATTTTCCAGCAAATGCTGGAGCaaaa < 2:336450/275‑1 (MQ=255)
gcgtccgggTAC‑ATCGACACCTGGGGTGGCAAGGCGGTTCGCCAGATCTTGGCAAGTCTGCGAA‑GGATATTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGCCACTATAAAAGCACATTAATTTTCCAGCAAATGCTGGAGCAAAATACCGTTGAGCATgg < 2:14190/282‑1 (MQ=255)
gCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGCCACTATAAAAGCACATTAATTTTCCAGCAAATGCTg > 2:1869948/1‑266 (MQ=255)
gCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGCCACTATAAAAGCACATTAATTTTCCAGCAAATGCTg < 1:1869948/266‑1 (MQ=255)
gCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGCCACTATAAAAGCACATTAATTTTCCAGCAAATGCTGGAGCAAAATACCGTTGAGCATgg < 1:382137/289‑1 (MQ=255)
gCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGCCACTATAAAAGCACATTAATTTTCCAGCAAATGCTGGAGCAAAATACCGTTGAGCATgg < 1:647864/289‑1 (MQ=255)
gCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGCCACTATAAAAGCACATTAATTTTCCAGCAAATGCTGGAGCAAAATACCGTTGAGCATg > 1:1890659/1‑288 (MQ=255)
gCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGCCACTATAAAAGCACATTAATTTTCCAGCAAATGCTGGAGCAAAATACCGTTGAGCATg > 1:556238/1‑288 (MQ=255)
gCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGCCACTATAAAAGCACATTAATTTTCCAGCAAATGCTGGAGCAAAATACCGTTGAGCATg > 2:1006272/1‑288 (MQ=255)
gCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGCCACTATAAAAGCACATTAATTTTCCAGCAAATGCTGGAGCAAAATACCGTTGAGCATg > 1:1138299/1‑288 (MQ=255)
gCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGCCACTATAAAAGCACATTAATTTTCCAGACAATTCTGGAGCAAAAAACCGTTTAGCATgg > 2:1415054/1‑289 (MQ=255)
aTCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGCCACTATAAAAGCACATTAATTTTCCAGCAAATGCTGGAGCAAAATACCGTTTAGCATGGCCCGGTTTAca > 2:1614524/1‑287 (MQ=255)
cGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTaa > 2:84565/1‑177 (MQ=255)
cGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGa < 1:1354686/187‑1 (MQ=255)
cGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGCCACTATAAAAGCACATTAATTTTCCAGCaaa < 2:636994/247‑1 (MQ=255)
cGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGCCACTATAAAAGCACATTAATTTTCCAGCAAATGCTGGAGCAAAATACCGTTGAGCATGGCGCGTTTTACCAgc > 1:280025/1‑289 (MQ=255)
cGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGCCACTATAAAAGCACATTAATTTTCCAGCAAATGCTGGAGCAAAATACCGTTGAGCATGGCGCGTTTTACCAgc > 1:786377/1‑289 (MQ=255)
acacCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGCCACTATAAAAGCACATTAATTTTCCAGCAAATGCTGGAGCAAAATACCGTTGAGCATGGCGCGTTTTACCAgcgc > 2:1457166/1‑289 (MQ=255)
acacCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGCCACTATAAAAGCACATTAATTTTCCAGCAAATGCTGGAGCAAAATACCGTTGAGCATGGCGCGTTTTACCAgcgc > 2:1280045/1‑289 (MQ=255)
acacCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGCCACTATAAAAGCACATTAATTTTCCAGCAAATGCTGGAGCAAAATACCGTTGAGCATGGCGCGTTTTACCAgcgc > 2:112614/1‑289 (MQ=255)
acCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATACCGCAAATTACATTTTTAATGGTCATGGATTACCCAGAATATTGACAACAATAAGCGCCACCATAAAAGCACATTAATTTTCCAGCAAATGCTGGACCAAAATACCGTTGAGCATGGCGCGTTTTACCAGCGCaa > 1:1819971/1‑289 (MQ=255)
ccTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGCCACTATAAAAGCACATTAATTTTCCAGCAAATGCTGGAGCAAAATACCGTTGAGCATGGCGCGTTTTACCAGCGCaaa > 1:1412058/1‑289 (MQ=255)
gCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGCCACTATAAAAGCACATTAATTTTCCAGCAAATGCTGGAGCAAAATACCGTTGAGCATGGCGCGTTTTACCAGCGCAAAAg > 2:1502763/1‑288 (MQ=255)
gCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCAGTGCAATAATTCCGCTGCACCCGGTACGGCGACGGTATCGTGCATCAGCACGCCGACGATATCGCAAATTACTTTTTTAATGGTCCTGGACTAACCAGAATATTTACAACAATAAGCGCCACTATAAAAGCACATTAATTTACAAGCAAATGCTGGCGCAAAATACCGTTGAGCATTGAGAGTTTTACCACTGCACAAg > 2:740708/1‑288 (MQ=255)
tCGCCAGATCTTGCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGCCACTATAAAAGCACATTAATTTTCCAGCAAATGCTGGAGCAAAATACCGTTGAGCATGGCGCGTTTTACCAGCGCAAAAGCGCCGATTgccgagcgg < 1:273491/289‑8 (MQ=255)
gCCCAGTCTGCGAA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGCCACTATAAAAGCACATTAATTTTCCAGCAAATGCTGGAGCAAAATACCGTTGAGCATGGCGCGTTTTACCAGCGCAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCa < 1:1502763/289‑1 (MQ=255)
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TTAGCGACGAAATAGGCTGCTTTATGCATCATGTCCCAGTTGTAGGAACGCGTTTCGCCAACAATCACGAAATCAGGGTTCACATCGGTAATAGTGAAACCGGCTTTGTACAGTTCATGAATCAGTGCGCCTTCGCCCACCACATACGCTTTCTTGCCTTCCTGGCGACGCAGGAAATCGGCAGTC‑GCCATCGCAGAGGTATAAAACACGCTGTCAGGTAC‑ATCGACACCTGCGGTGGCAAAGCGGTTCGCCAGATCTTGCCCAGTCTGGCTA‑GGATAGTTGGTCAGCAACACCAGCGGCAGGCCTTTATCCATAATCCCGTGCAAAAATTCCGCTGCACCCGGTACGGCGACGTTATCGTGCATCAGCACGCCGTCGATATCGCAAATTACATTTTTAATGGTCATGGACTACCCAGAATATTGACAACAATAAGCGCCACTATAAAAGCACATTAATTTTCCAGCAAATGCTGGAGCAAAATACCGTTGAGCATGGCGCGTTTTACCAGCGCAAAAGCGCCGATTGCGCTGCGGTGATCCAGCTCA > CP042583/572352‑572899
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A