Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 589,411 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583589,4110AT99.5% 438.8 / NA 186intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (95/90);  minor base G (1/0);  total (96/90)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583589,4120CG97.9% 422.9 / NA 186intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (92/90);  minor base T (4/0);  total (96/90)
Fisher's exact test for biased strand distribution p-value = 1.22e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583589,4130TA100.0% 439.0 / NA 186intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (96/90);  total (96/90)

Only 100 of 186 total aligned reads displayed.

TATCCATACATTGCCACTTTTTTCAAAGCATAAACCGATACCCAATACCGGTTTCAGTAATAAAATGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGACTTACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGAACTGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTACTGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATACTCAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGGCTCGGGCTAATGGTCATCAGTGCCAA  >  CP042583/589131‑589692
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                       
tATCCATACATTGCCACTTTTTTCAAAGCATAAACCGATACCCAATACCGGTTTCAGTAATAAAATGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAg                                                                                                                                                                                                                                                                                   >  1:605302/1‑289 (MQ=255)
      tACATTGCCACTTTTTTCAAAGCATAAACCGATACCCAATACCGGTTTCAGTAATAAAATGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCAt                                                                                                                                                                                                                                                                              >  1:616418/1‑288 (MQ=255)
      tACATTGCCACTTTTTTCAAAGCATAAACCGATACCCAATACCGGTTTCAGTAATAAAATGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATa                                                                                                                                                                                                                                                                             >  2:912392/1‑289 (MQ=255)
       acatgtccACTTTTTTCAAAGAATAAACCGATCACCATTACCGGTTTCAGTAATAAACTGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTATATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATa                                                                                                                                                                                                                                                                             <  2:1498665/282‑1 (MQ=255)
           tGCCACTTTTTTCAAAGCATAAACCGATACCCAATACCGGTTTCAGTAATACAATGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAACTCGTTGCTGTGTTTGATCGAGTTTAGACCCTACATCTGCTGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGCGTTTATTTTTTAGTTCAAAGCGTGGTGATACCAGTCAATACtgtg                                                                                                                                                                                                                                                                        >  2:1953463/1‑289 (MQ=255)
           tGCCACTTTTTTCAAAGCATAAACCGATACCCAATACCGGTTTCAGTAATAAAATGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCTTGGTTATACAAGACCATACAgat                                                                                                                                                                                                                                                                        >  2:784989/1‑287 (MQ=255)
           tGCCACTTTTTTCAAAGCATAAACCGATACCCAATACCGGTTTCAGTAATAAAATGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAgtg                                                                                                                                                                                                                                                                        >  2:747816/1‑289 (MQ=255)
           tGCCACTTTTTTCAAAGCATAAACCGATACCCAATACCGGTTTCAGTAATAAAATGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAgtg                                                                                                                                                                                                                                                                        >  2:1247272/1‑289 (MQ=255)
            gCCACTTTTTTCAAAGCATAAACCGATACCCAATACCGGTTTCAGTAATAAAATGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAgtgt                                                                                                                                                                                                                                                                       >  1:1191983/1‑289 (MQ=255)
            gCCACTTTTTTCAAAGCATAAACCGATACCCAATACCGGTTTCAGTAATAAAATGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAgtg                                                                                                                                                                                                                                                                        >  1:1319411/1‑288 (MQ=255)
            gCCACTTTTTTCAAAGCATAAACCGATACCCAATACCGGTTTCAGTAATAAAATGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAgtg                                                                                                                                                                                                                                                                        >  1:880257/1‑288 (MQ=255)
            gCCACTTTTTTCAAAGCATAAACCGATACACAATACCGGTTTCAGTAATAAAATGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAgtg                                                                                                                                                                                                                                                                        >  1:1941614/1‑288 (MQ=255)
               aCTTTTTTCAAAGCATAAACCGATACCCAATACCGGTTTCAGTAATAAAATGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACACACAGCAAGGACGAACATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAATGCGTGGTGATCCCAGACCATTACGTGTcca                                                                                                                                                                                                                                                                    >  2:955420/1‑289 (MQ=255)
                 ttttttCAAAGCATAAACCGATACCCAATACCGGTTTCAGTAATAAAATGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTTTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTTTacaac                                                                                                                                                                                                                                                                  >  2:552751/1‑289 (MQ=255)
                 ttttttCAAAGCATAAACCGATACCCAATACCGGTTTCAGTAATAAAATGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTATATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTccaa                                                                                                                                                                                                                                                                   >  1:1498665/1‑288 (MQ=255)
                                aaCCGATACCCAATACCGGTTTCAGTAATAAAATGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGa                                                                                                                                                                                                                                                   <  2:1304870/289‑1 (MQ=255)
                                   cgatctccatatccGGTTTCAGTAATAAAATGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATgg                                                                                                                                                                                                                                                <  2:736997/277‑1 (MQ=255)
                                     aTACCCAATACCGGTTTCAGTAATAAAATGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGaa                                                                                                                                                                                                                                              <  2:1203216/289‑1 (MQ=255)
                                      tACCCAATACCGGTTTCAGTAATAAAATGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTccaac                                                                                                                                                                                                                                                                  <  1:983512/268‑1 (MQ=255)
                                      tACCCAATACCGGTTTCAGTAATAAAATGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTccaac                                                                                                                                                                                                                                                                  >  2:983512/1‑268 (MQ=255)
                                      tACCCAATACCGGTTTCAGTAATAAAATGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACACAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGTGCGATCAGTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTGTAGTTCAAATCGTGGTTATATCAGACAATACAGTTGCCAACCAAGGAAGGTGACGATGGaa                                                                                                                                                                                                                                              >  2:1798131/1‑288 (MQ=255)
                                           aaTACCGGTTTCAGTAATAAAATGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAAGTCACGATGGAACCGTAc                                                                                                                                                                                                                                        >  1:736997/1‑289 (MQ=255)
                                             tACCGGTTTCAGTAATAAAATGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCTAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGTCCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAg                                                                                                                                                                                                                                      >  2:1928064/1‑289 (MQ=255)
                                                  gTTTCAGTAATAAAATGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGAcc                                                                                                                                                                                                                                                                                >  1:328186/1‑242 (MQ=255)
                                                  gTTTCAGTAATAAAATGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATgg                                                                                                                                                                                                                                 >  2:861779/1‑289 (MQ=255)
                                                     tCAGTAATAAAATGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATCGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGACCCGGCATACATACCGAACTATTTGCCCACAAACAGAAAGGGCGATCCTCCACTCGCCCTTCTTTACTTCGTTTTATTAACCGTGTTTCTTTTTCAGTTCAACGCGTGGTGATACTAGCCCATACACTGTCCAACCAACGAAGGTCACGATGGAACCGTACTGCATGGct                                                                                                                                                                                                                               >  2:1406251/1‑288 (MQ=255)
                                                       aGTAATAAAATGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGcttct                                                                                                                                                                                                                            >  1:1122407/1‑289 (MQ=255)
                                                           ataaAATGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTccc                                                                                                                                                                                                                        <  2:586021/289‑1 (MQ=255)
                                                           ataaAATGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTccc                                                                                                                                                                                                                        <  1:136709/289‑1 (MQ=255)
                                                           ataaAAAGGCGAGGCCGGTCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAGAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTccc                                                                                                                                                                                                                        <  1:1674731/289‑1 (MQ=255)
                                                             aaaaTGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCg                                                                                                                                                                                                                      <  2:604130/289‑1 (MQ=255)
                                                             aaaaTGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCg                                                                                                                                                                                                                      <  1:396764/289‑1 (MQ=255)
                                                              aaaTGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCgg                                                                                                                                                                                                                     >  2:367339/1‑289 (MQ=255)
                                                                   gCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGatgcg                                                                                                                                                                                                                >  2:1684338/1‑285 (MQ=255)
                                                                       ggccgggccgGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTTGTGATACCAGa                                                                                                                                                                                                                                                                                  <  2:135948/219‑1 (MQ=255)
                                                                        gccgggccggATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATa                                                                                                                                                                                                                                                                             >  2:265912/1‑223 (MQ=255)
                                                                        gccgggccggATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATa                                                                                                                                                                                                                                                                             <  1:265912/223‑1 (MQ=255)
                                                                         ccgggccggATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAg                                                                                                                                                                                                           <  1:1247272/288‑1 (MQ=255)
                                                                             gccggATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGat                                                                                                                                                                                                                   >  1:797195/1‑275 (MQ=255)
                                                                              ccggATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCAt                                                                                                                                                                                                      <  1:784989/288‑1 (MQ=255)
                                                                               cggATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATaa                                                                                                                                                                                                    <  2:605302/289‑1 (MQ=255)
                                                                               cggATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATaa                                                                                                                                                                                                    <  2:223149/289‑1 (MQ=255)
                                                                               cggATCCGGTGCCAGTTTTTGTAGCAGATGCCCCATATGATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATaa                                                                                                                                                                                                    <  2:314660/289‑1 (MQ=255)
                                                                                ggATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATaaa                                                                                                                                                                                                   <  1:1798131/289‑1 (MQ=255)
                                                                                       gTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCtata                                                                                                                                                                                            >  2:1885650/1‑289 (MQ=255)
                                                                                       gTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCtata                                                                                                                                                                                            >  2:1449073/1‑289 (MQ=255)
                                                                                         tCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGATTACAGCGCATAAAAGCTATACa                                                                                                                                                                                          >  2:119172/1‑289 (MQ=255)
                                                                                              tttttGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATcgc                                                                                                                                                                                      >  1:1921284/1‑288 (MQ=255)
                                                                                                  tGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCca                                                                                                                                                                                  >  1:1728167/1‑288 (MQ=255)
                                                                                                                  tataATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGAGCCAACAAAAGCAACAAAGtt                                                                                                                                                                 >  1:1558401/1‑289 (MQ=255)
                                                                                                                       ttACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCa                                                                                                                                                             >  1:1419265/1‑288 (MQ=255)
                                                                                                                        tACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCttcttc                                                                                                                                                                                                                          >  1:589307/1‑226 (MQ=255)
                                                                                                                          cGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTccc                                                                                                                                                                                                                        >  1:1084431/1‑226 (MQ=255)
                                                                                                                          cGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCCTCCCCGGATGAGTACAGCGCATaa                                                                                                                                                                                                    <  1:457474/246‑1 (MQ=255)
                                                                                                                          cGCAAATAGTTGCTGTGTTCCATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCATTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACACCGCGCCAACAAAAGCAACAAAGTTTGCAACtt                                                                                                                                                         >  1:641974/1‑289 (MQ=255)
                                                                                                                            cAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTc                                                                                                                                                       >  2:425245/1‑289 (MQ=255)
                                                                                                                             aaaTAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCg                                                                                                                                                      <  1:575773/289‑1 (MQ=255)
                                                                                                                               aTAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGTTAACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTAAAGCGCATAAAACGTATACATCGCGCCAACAAAAGCAACAAAGTCTGCCACTTTCGc                                                                                                                                                     >  1:1372568/1‑288 (MQ=255)
                                                                                                                                       tgtgTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCttttgaggg                                                                                                                                            <  1:747816/289‑7 (MQ=255)
                                                                                                                                         tgtTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCttttgaggggg                                                                                                                                          >  1:524683/1‑281 (MQ=255)
                                                                                                                                           ttCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGc                                                                                                                                        >  1:1623590/1‑289 (MQ=255)
                                                                                                                                           ttCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGc                                                                                                                                        >  1:935379/1‑289 (MQ=255)
                                                                                                                                            tCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAGCAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGca                                                                                                                                       <  1:803958/289‑1 (MQ=255)
                                                                                                                                                   cgTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATaa                                                                                                                                                                                                    <  2:100287/221‑1 (MQ=255)
                                                                                                                                                   cgTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATaa                                                                                                                                                                                                    >  1:100287/1‑221 (MQ=255)
                                                                                                                                                   cgTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGc                                                                                                                                >  1:433125/1‑289 (MQ=255)
                                                                                                                                                    gTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCg                                                                                                                               <  2:498641/289‑1 (MQ=255)
                                                                                                                                                    gTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCg                                                                                                                               <  2:652266/289‑1 (MQ=255)
                                                                                                                                                    gTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCg                                                                                                                               <  1:376947/289‑1 (MQ=255)
                                                                                                                                                    gTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCg                                                                                                                               <  1:32887/289‑1 (MQ=255)
                                                                                                                                                     tttAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTAAACATCGCCCCAACAAAAGCAACAAAGATTGGCACTTTCGCTTTTGAGGGGGGCACATTAGcc                                                                                                                               >  2:1208330/1‑287 (MQ=255)
                                                                                                                                                        aGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCt                                                                                                                           <  1:1449073/289‑1 (MQ=255)
                                                                                                                                                          aCCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTc                                                                                                                         <  1:1038646/289‑1 (MQ=255)
                                                                                                                                                           cccTACATCTGCCGGATGCGGCATAAATAACGAACTCTTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCtt                                                                                                                          <  2:700009/287‑1 (MQ=255)
                                                                                                                                                              tACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGat                                                                                                                                                                                                                   >  1:186438/1‑194 (MQ=255)
                                                                                                                                                               aCATCTGCCGTATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGat                                                                                                                                                                                                                   <  2:69220/194‑2 (MQ=255)
                                                                                                                                                                      ccGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACt                                                                                                             >  2:1535320/1‑289 (MQ=255)
                                                                                                                                                                      ccGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTAAAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATAACTCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACAATAACCACCTATTGaataaataca                                                                                                             >  2:718060/1‑284 (MQ=255)
                                                                                                                                                                                cATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCa                                                                                                   >  1:941973/1‑289 (MQ=255)
                                                                                                                                                                                        aCGAACTATTTGCCAACAACACGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGTCAGa                                                                                           <  2:1921284/289‑1 (MQ=255)
                                                                                                                                                                                         cGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCttttgaggg                                                                                                                                            >  2:328343/1‑233 (MQ=255)
                                                                                                                                                                                          gAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAat                                                                                         >  2:1501452/1‑289 (MQ=255)
                                                                                                                                                                                                        caaacaGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGatat                                                                           >  2:1155807/1‑289 (MQ=255)
                                                                                                                                                                                                               aaaGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGGGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTcac                                                                    <  2:619039/289‑1 (MQ=255)
                                                                                                                                                                                                                     cGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACgg                                                               <  1:1284720/288‑1 (MQ=255)
                                                                                                                                                                                                                     cGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACgg                                                               <  1:861779/288‑1 (MQ=255)
                                                                                                                                                                                                                             cAATCGCCCTTTTTTACTTTGTTTTATTAACCGAGTTTATTTTTCAGTTAAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTGTTGAGGGGGGCACATTAGCGAACTTATGAATAATGACTACTGCCGCAATTGACAGACTATACGGAATGATAATGGTCAGCACGGCCAGGTTaa                                                      >  2:1690645/1‑289 (MQ=255)
                                                                                                                                                                                                                                ttgCCCTTTTTTACTTTGTTTTATTAACCGTGTTTCTTTTTCGGTTCAATGGCTGATGATACCAGACCATCCAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCa                                                   <  2:1383433/287‑1 (MQ=255)
                                                                                                                                                                                                                                tCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCa                                                   <  2:492275/289‑1 (MQ=255)
                                                                                                                                                                                                                                tCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCa                                                   <  2:1283583/289‑1 (MQ=255)
                                                                                                                                                                                                                                   cccTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCAt                                                                                                                                                                                                      <  1:1334276/139‑1 (MQ=255)
                                                                                                                                                                                                                                              tttGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAactga                                     <  2:524683/289‑1 (MQ=255)
                                                                                                                                                                                                                                              tttGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAactga                                     <  2:721924/289‑1 (MQ=255)
                                                                                                                                                                                                                                                         aaCCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAgcga                          <  2:1053535/289‑4 (MQ=255)
                                                                                                                                                                                                                                                         aaCCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAgcga                          <  1:1606108/289‑4 (MQ=255)
                                                                                                                                                                                                                                                            cGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTa                                                                                                                                                                                                                                         <  2:1282430/79‑1 (MQ=255)
                                                                                                                                                                                                                                                            cGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAgcgacgg                       >  2:1066718/1‑283 (MQ=255)
                                                                                                                                                                                                                                                               gtTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGc                                                                                                                                >  1:718151/1‑181 (MQ=255)
                                                                                                                                                                                                                                                               gtTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAgcgacgggc                     <  1:1690645/288‑9 (MQ=255)
                                                                                                                                                                                                                                                                   atatttCAGTTCAAAGCGTGGTGATACCA‑ACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATgg               <  1:1687395/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                       
TATCCATACATTGCCACTTTTTTCAAAGCATAAACCGATACCCAATACCGGTTTCAGTAATAAAATGGCGAGGCCGGGCCGGATCCTGTTCCAGTTTTTGTCGCAGATGCCCCATATAATTACGCAAATAGTTGCTGTGTTCGATCGCGTTTAGACCCTACATCTGCCGGATGCGGCATAAATAACGAACTATTTGCCAACAAACAGAAAGGGCGATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGACTTACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGAACTGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTACTGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATACTCAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGGCTCGGGCTAATGGTCATCAGTGCCAA  >  CP042583/589131‑589692

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A