Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
A5 F210 I1 R1
|
4929 |
268.4 |
3907572 |
96.3% |
3762991 |
273.2 |
Breseq alignment
BRESEQ :: Evidence
|
evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
RA |
CP042583 |
603,211 |
3 bp→TCG |
intergenic (–/–) |
– / – |
–/– |
|
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
* | CP042583 | 603,211 | 0 | A | T | 99.5%
| 496.0
/ NA
| 212 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (83/127); minor base C (1/0); total (84/128) |
Fisher's exact test for biased strand distribution p-value = 3.98e-01 |
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
* | CP042583 | 603,212 | 0 | G | C | 100.0%
| 499.4
/ NA
| 212 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (84/128); total (84/128) |
* | CP042583 | 603,213 | 0 | C | G | 98.6%
| 485.1
/ NA
| 212 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base C (3/0); new base G (81/128); total (84/128) |
Fisher's exact test for biased strand distribution p-value = 6.09e-02 |
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 212 total aligned reads displayed.
TACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGGAGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGAGCGCCAGCCTGGCAACGGGCGGGTTAAGCCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCAGCTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAGCCAGTTTTCTGGTGAAAGATTTATTGATCGACTGGCGCGAAGGCGAGCGATATTTCATGAGCCAGCTGATTGATGGTGATTTGGCAGCCAATAACGGTGGCTGGCA > CP042583/602931‑603491
|||
cTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGGAGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCTACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGGCGTGTCTCGCTTAATGAGCTGATCCGGCGCGGGTTTTACGGTCGCCTGTGAACGTATGACCCCCCCTTGTTTaa > 2:1185957/1‑289 (MQ=255)
cTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGGAGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCCCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGTGCTGATCTGGCGCGAGTTTTACCGTCACCTGGTAACGTATCCGCCCTCGTTGTGTaa > 2:1926420/1‑289 (MQ=255)
cgcATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGGAGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTCGTGTCGGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATCACGTACCACCCCTCGTTGTTTAAAc > 2:1782447/1‑288 (MQ=255)
cgcATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGGAGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACa > 1:617800/1‑289 (MQ=255)
gcATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGGAGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACAt < 1:1373722/289‑1 (MQ=255)
gcATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGGAGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGACCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACa < 1:969745/288‑1 (MQ=255)
gcATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGGAGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTATCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACAt < 2:233605/289‑1 (MQ=255)
ttttCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGGAGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCg < 2:1067210/288‑1 (MQ=255)
ttttCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGGAGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGt < 1:58360/289‑1 (MQ=255)
ggTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGGAGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCAttt < 1:1535030/289‑1 (MQ=255)
ggTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGGAGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCAttt < 1:1455747/289‑1 (MQ=255)
aagaaAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGGAGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTg > 1:1800320/1‑288 (MQ=255)
aagaaAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGGAGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGc < 2:1093569/289‑1 (MQ=255)
aaccggcgATTCCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGGAGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCAACAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGAc < 1:545344/286‑1 (MQ=255)
aaGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGGAGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGAc < 1:1421810/289‑1 (MQ=255)
aaGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGGAGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGAc < 2:1873800/289‑1 (MQ=255)
aaGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGGAGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGAc < 2:1800320/289‑1 (MQ=255)
ggctgttgggaaaatACGCAGGTGTTGCCGGGACGGTGCCGAAGAATATGAGCAACAACGAGATGTTCCGGCAGTGGAAGGGCCCAGCCGTTTGTGGGCCAGCCGGGCAACGGGCGGGTTATCGCCTCGCCAG‑GGCTTGCATGGCTTGTTGGCTGGACAGCCGCGGGCGCTGGACGGGGGGG‑CCGGTAGTGTCTAGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGGAAACATCGTCCATTTATTGCCTGGACGGAt < 2:1140114/275‑1 (MQ=255)
gATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGGAGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCgt > 1:1532225/1‑289 (MQ=255)
gATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGGAGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCg < 1:681710/288‑1 (MQ=255)
gcgcAATTACGCCCGTTTTCCCAGAACGGGGCCGGTGAATATGCGCAACAACGATATTTTCCGGCAGTGGAAGGCACCATCCGTTTGTCGGCCAGCCTGTCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTAc < 2:1764380/289‑1 (MQ=255)
aTTACGCCAGTTTTGCCAGAACGGTGCCGGAGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTgg < 1:630637/289‑1 (MQ=255)
gCCAGTTTTGCCAGAACGGTGCCGGAGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCagag < 2:1660702/289‑1 (MQ=255)
gatgagggTGCAGGGGAAGAGGAGCAACAACGGTATGTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCAGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGca < 2:629786/282‑1 (MQ=255)
gAACGGTGCCGGAGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACCGAACGTTTACAGGGGCCGAGCAATCCCGcacct > 2:495663/1‑287 (MQ=255)
aCGGTGGCGGAGAATATGAGCAACAGCGAGATTTTGCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTCGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGGCCCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGcac < 2:1589243/286‑1 (MQ=255)
cgttGCCGGGGAATAGGAGAAACAACGGAATTTTCCGGCATTGGAAGGCACAGGCCGCTTGTCGGCCAGCCTGGCAACGGGCGGGTTGTCGCCTCGCCAG‑TGCTGGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTa < 2:852358/286‑1 (MQ=255)
cGGGGCCGAAGAATACAGGCAACAACGGAATATTCCGGCAGTGGAAGGCAGCAGCCGTTTGTCGGCCAGCCAGGCAACGGGCGGGTTCCCGCCTCGCCAG‑TGCTTGCATCGATTGTTGGGTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATATCGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTa < 2:685630/289‑1 (MQ=255)
tGCCGGAGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACa < 1:1926420/288‑1 (MQ=255)
tGCCGGAGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAg > 1:1508873/1‑289 (MQ=255)
tGCCGGAGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAg > 2:809294/1‑289 (MQ=255)
tGCCGGAGAATATGAGCAACAACGAGATTTTACGGCAGTGGAAGGCACAAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGGTATCGCCTCGCCAG‑TGCTTGCATCGCTTGGTGGCCGAACAGCCGCAGGCGCTGGACGGTGTGG‑CCGGGAGTGTCTGGCTTAATGACCTGATCTGGCGCGTGTTTGACCGTGACCCGACCACGTATCACCCCTCCGCGTGTATACCTCATCCTCTTATTGCTCGCAGGGCTCGTGTCCCATGGCAGTGGAAGCCCGCACAGTTAccg > 2:1280983/1‑287 (MQ=255)
gCCGGAGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCGCCAGCCGTTTGTCGGCCATCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAgg < 1:1251155/289‑1 (MQ=255)
ggAGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCt < 1:1359092/289‑1 (MQ=255)
tatGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAgg > 1:797919/1‑289 (MQ=255)
tatGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGCGTCTGGCTTAATGAGATGATCTGGCGCGAGTCGTACCGACACCTGATACAGTATCACCCCTCGTTGTGGAAACAACGTCCATATCTCTCCTGGACGGACCGTGTACAGTGGCAGGGCCATCCCGCACATTTTAACGGCTGGCAgg > 2:1903788/1‑289 (MQ=255)
aacaacGGGATGTTCCGGCAGGGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCaa < 2:370168/289‑1 (MQ=255)
acaacGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCaaa > 1:164262/1‑289 (MQ=255)
gagaTTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACggg < 1:1197942/289‑1 (MQ=255)
gttttCCGGCGGTGGAAGGCACCGGCCGTGTGTCGGCCAGGCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGAt < 2:1556870/287‑1 (MQ=255)
gTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CAGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGCGATTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGCTCGTGTAAAGTGGCAGAGCAATCCCGCACATTTACAGGCCTTGCAGGAAGGCCAAACGGGATACCCTAttgatg > 2:615302/1‑289 (MQ=255)
ggAGGGGACCCGCCGTGTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGa < 2:1532225/288‑1 (MQ=255)
agAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGa < 2:1173422/287‑1 (MQ=255)
gAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGAt > 1:557941/1‑288 (MQ=255)
cgtttgtcggcCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGt < 1:1739791/279‑1 (MQ=255)
gtgtgggcacggttGGCAACGGGCGGGGTATCGCCTGGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGGGGGG‑CCGGTAGTGTCTGGCTTAATGGGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAg < 2:1508873/275‑1 (MQ=255)
ggCCCGGCACCGGGCGGGTTATCTCCTCGCCAG‑TGCTTGCATCGCTGGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCa < 2:466192/288‑1 (MQ=255)
gacaCGGGCGGGGTATCGGCTCGCCAG‑TGCTGGCATCGCTTGTTGGCTGAACAGCCGCAGGTGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCActggc < 2:948487/285‑1 (MQ=255)
cAACGGGCGGGTTATGGCCTCGCCTGTTGTTTGC‑TCGCTTGTTGGCTGAACAGCCGCAGGCGGTGGACGGGGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCActggct < 2:1684642/288‑1 (MQ=255)
cAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCActggct < 1:110832/288‑1 (MQ=255)
cAACGGGCGGGTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCActggct < 2:797919/288‑1 (MQ=255)
ggcgggTTATCGCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCg > 1:539708/1‑243 (MQ=255)
cgggcgatcgctgcGCCAG‑TGCGTCACTCGCTTGTTGGCTGAACCGGCGGAGGCGCTGGGCGGTGGGG‑CCGGTAGTGTCTGGCTGAATGTGCTAATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTCTTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCa < 2:1046832/275‑1 (MQ=255)
gttatcgccTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATaa < 1:809294/281‑1 (MQ=255)
gttatcgccTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATaa < 1:952270/281‑1 (MQ=255)
gTTATGGCCTCGGCAG‑TGCTTGCATGGCTGGTTGGCTGAACAGCCGCAGGGGGTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATaa < 2:896664/288‑1 (MQ=255)
tatcgccTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACa < 1:1782447/283‑1 (MQ=255)
cGCCAG‑TGCTTGTATGGCTTGTTGGCTGAACGGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGga < 2:548541/289‑1 (MQ=255)
cGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGga < 1:228516/289‑1 (MQ=255)
gCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATa > 1:1403088/1‑223 (MQ=255)
gCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATa < 2:1403088/223‑1 (MQ=255)
tGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTTATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAg > 1:739043/1‑288 (MQ=255)
cGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAGCCAGtt > 1:1100890/1‑289 (MQ=255)
ttgttgGCTGAACAGCCGCAAGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAGCCAGtttt < 1:1011177/288‑1 (MQ=255)
tgGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAGCCAGTTTTCTGGt < 1:1304461/289‑1 (MQ=255)
cTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAGCCAGTTTTCTGGTGa < 1:1180814/288‑1 (MQ=255)
aaCAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAGCCAGTTTTCTGGTGAAAGa > 1:433026/1‑289 (MQ=255)
tGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTCCAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACACGATTGTTGATGCCGCTATGCGGCAGCTTAACAGCACTGTCTGGATGCATCACCGGCTACGGATGATTACAGCCAGTTTGCCGTTGAAAGATGTagttgcctaaga > 2:584765/1‑278 (MQ=255)
tGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAGCCAGTTTTCTGGTGAAAGATTTATTGATCGACTg > 1:231715/1‑289 (MQ=255)
g‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAGCCAGTTTTCTGGTGAAAGATTTATTGATCGACTGGCGCGAAGgc < 1:1664916/288‑1 (MQ=255)
ccGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAGCCAGTTTTCTGGTGAAAGATTTATTg < 2:324481/269‑1 (MQ=255)
ccGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAGCCAGTTTTCTGGTGAAAGATTTATTg > 1:324481/1‑269 (MQ=255)
cGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAGCCAGTTTTCTGGTGAAAGATTTATTGATCGACTGGCGCGAAGgcgag < 2:1417207/289‑1 (MQ=255)
cGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAGCCAGTTTTCTGGTGAAAGATTTATTGATCGACTGGCGCGAAGgcgag < 1:144902/289‑1 (MQ=255)
cGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAGCCAGTTTTCTGGTGAAAGATTTATTGATCGACTGGCGCGAAGgcgag < 1:1195480/289‑1 (MQ=255)
cGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAGCCAGTTTTCTGGTGAAAGATTTATTGATCGACTGGCGCGAAGgcgag > 2:876220/1‑289 (MQ=255)
tAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAGCCAGTTTTCTGGTGAAAGATTTATTGATCGACTGGCGCGAAGgcgagcg < 2:433026/288‑1 (MQ=255)
gtCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAGCCAGTTTTTGGGTGAAAGGTTTATTGATCTGCTGGCGCGGAGgccagcgaattt > 2:1727407/1‑285 (MQ=255)
tCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCActggctgg > 1:1836294/1‑206 (MQ=255)
cTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGAACTGGCTGGTTGCATAACAGGCTACGGAGGATTACAGCCAGTTTTACGGTGAACGATTTATTGATCGACTGGGTCGAAGgggggcggttctt > 2:205040/1‑282 (MQ=255)
cTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATc > 1:46519/1‑94 (MQ=255)
cTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAGCCAGTTTTCTGGTGAAAGATTTATTGATCGACTGGCGCGAAGGCGAGCGATATTTCATg < 1:1727407/288‑1 (MQ=255)
cTTAATGAGCTGATCTGGCGCGAGTTTTACCATCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAGCCAGTTTTCTGGTGAAAGATTTATTGATCGACTGGCGCGAAGGCGAGGGATATTTAATgt > 1:359369/1‑288 (MQ=255)
taagggtcTGATCTGGCGCCAGTTTTCCCGGCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTGTTGCCTGGACGGATCGTGTACAGTGGCGAAGCAATCCCGCACATTTACAGGCCTGGCAGTAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAGCCAGTTTTCTGGTGAAAGATTTATTGATCGACTGGCGCGAAGGCGAGCGATATTTCATgtcg < 2:1103107/282‑4 (MQ=255)
tAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAGCCAGTTTTCTGGTGAAAGATTTATTGATCGACTGGCGCGAAGGCGAGCGATATTTCATgtcg < 1:205040/289‑4 (MQ=255)
aaTGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAGCCAGTTTTCTGGTGAAAGATTTATTGATCGACTGGCGCGAAGGCGAGCGATATTTCATgtcgc > 1:286842/1‑285 (MQ=255)
cTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAGCCAGTTTTCTGGTGAAAGATTTATTGATCGACTGGCGCGAAGGCGAGCGATATTTCATGTCGCAGCtga > 2:407584/1‑289 (MQ=255)
cTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGATACGGATGATTACAGCCAGTTTTCTGGTGAAAGATTTATTGATCGACTGGCGCGAAGGCGAGCGATAtttgctgtcgcacgtta > 1:1893130/1‑275 (MQ=255)
gATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAGCCAGTTTTCTGGTGAAAGATTTATTGATCGACTGGCGCGAAGGCGAGCGATATTTCATGTCGCAGCtgatt > 1:311650/1‑289 (MQ=255)
cgcgAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGt < 2:1819391/162‑1 (MQ=255)
cgcgAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGt > 1:1819391/1‑162 (MQ=255)
aGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTACCAGCACTGGCCGGATGCATAACAGGCTACGGATGATTACAGCCAGTTTTCTGGTGAAAGCTTTATTGAACGACTGGCCCCAAGGCGAGCGATATTTCATGTCGCAGCtgagtgtcggggagtt > 2:1349339/1‑279 (MQ=255)
gTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAGCCAGTTTTCTGGTGAAAGATTTATTGATCGACTGGCGCGAAGGCGAGCGATATTTCATGTCGCAGCTGATTGATGGTGATTTg > 1:514942/1‑289 (MQ=255)
ttttACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAGCCAGTTTTCTGGTGAAAGATTTATTGATCGACTGGCGCGAAGGCGAGCGATATTTCATGTCGCAGCTGATTGATGGTGATTTgg < 2:164262/289‑1 (MQ=255)
tttccttccccTGATGACATATCACCCCTCGTTGTGTAAACATCGTCATGTTATTGCCTGGACGGATCGTGTACAGTGGCAGGGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAGCCAGTTTTCTGGTGAAAGATTTATTGATCGACTGGCGCGAAGGCGAGCGATATTTCATGTCGCAGCTGATTGATGGTGATTTGGCa < 2:521903/280‑1 (MQ=255)
ttACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAGCCAGTTTTCTGGTGAAAGATTTATTGATCGACTGGCGCGAAGGCGAGCGATATTTCATGTCGCAGCTGATTGATGGTGATTTGACa < 1:835240/289‑1 (MQ=255)
tACCGTCACCTGATAACGTATCACCCCTCGCTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCTGGAAGGAAAAAAGGGATACCCGATTGTTGTTGCCGCTGTGCGGCAGCTTAACAGCCCTGGCTGGATGCCTAACAGTCTACGGATGATTACCGCCAGTTTTCTGGTGAAAGATATATTGATAAAGTGGCGCCACGGCGAGCGTACGTTCATGTCCACGCAGATTGATggatttctggac > 2:248333/1‑278 (MQ=255)
cTGATAACGTAGCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATAACCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAGCCAGTTTTCTGGTGAAAGATTTATTGATCGACTGGCGCGAAGGCGAGCGATATTTCATGTCGCAGCTGATTGATGGTGATTTGGCAGCCAATAACg < 1:470562/289‑1 (MQ=255)
gATAACGTATCGCCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACTGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCGGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAGCCAGTTTTCTGGTGAAAGATTTATTGATCGACTGGCGCGAAGGCGAGCGATATTTCATGTCGCAGCTGATTGATGGTGATTTGGCAGCCAATAACGGt < 2:956082/289‑1 (MQ=255)
aTAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAGCCAGTTTTCTGGTGAAAGATTTATTGATCGACTGGCGAGAAGGCGAGCGATATTTCATGTCGCAGCTGCATGATGGTGATTTGGCAGCCAATAACGGtg > 1:844237/1‑289 (MQ=255)
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TACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGGAGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGAGCGCCAGCCTGGCAACGGGCGGGTTAAGCCCTCGCCAG‑TGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGG‑CCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCAGCTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAGCCAGTTTTCTGGTGAAAGATTTATTGATCGACTGGCGCGAAGGCGAGCGATATTTCATGAGCCAGCTGATTGATGGTGATTTGGCAGCCAATAACGGTGGCTGGCA > CP042583/602931‑603491
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Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A