Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 604,191 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583604,1910GC98.4% 694.7 / NA 304intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/4);  new base C (158/140);  total (159/145)
Fisher's exact test for biased strand distribution p-value = 1.95e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583604,1920CG99.3% 697.1 / NA 304intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/1);  new base G (158/141);  total (159/145)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583604,1930TA99.7% 712.3 / NA 304intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base A (159/143);  total (159/145)
Fisher's exact test for biased strand distribution p-value = 4.75e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 304 total aligned reads displayed.

TTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAAGCTAGCCTGGCTTGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGGCTCATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATGCTCTGGAACATCGCGGTCGGAACGGTA  >  CP042583/603909‑604473
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                        
       tCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCg                                                                                                                                                                                                                                                                               <  2:851269/289‑1 (MQ=255)
       tCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCg                                                                                                                                                                                                                                                                               <  1:1349048/289‑1 (MQ=255)
       ccccccgccagcgcGCGTTGTCTGAATTTCAGCTCCTGATACAGCCAAGTCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAACTACTTCAATATAAGCATTGATGGAGTAGTGGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCg                                                                                                                                                                                                                                                                               <  2:1786756/284‑1 (MQ=255)
         cagcgccagcgcGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCggg                                                                                                                                                                                                                                                                             <  1:732899/289‑1 (MQ=255)
            cgccagcgcGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAG‑AAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCg                                                                                                                                                                                                                                                                          >  1:1925648/1‑288 (MQ=255)
                           gcggAATTTCAGCGCCTGATACAGCCAAATCATCATTACCAGGCCTACACACGCCAGTGCGACCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCa                                                                                                                                                                                                                                                           <  2:105259/286‑1 (MQ=255)
                                 tttCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGcc                                                                                                                                                                                                                                                      >  2:1928130/1‑288 (MQ=255)
                                          cTGATACAGCCAACTCATAAGTACCTGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGcc                                                                                                                                                                                                                                            <  2:585368/289‑1 (MQ=255)
                                          cTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGcc                                                                                                                                                                                                                                            <  1:526187/289‑1 (MQ=255)
                                              tACAGCCAAATCCTCAGTACCATTCCTACACACGCCGGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCAACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGc                                                                                                                                                                                                                                        <  2:1426960/289‑1 (MQ=255)
                                                   ccAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAAt                                                                                                                                                                                                                                   >  1:1168666/1‑289 (MQ=255)
                                                    cAAATCATCAGCACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATa                                                                                                                                                                                                                                  <  1:1749956/289‑1 (MQ=255)
                                                             aGTACCAGTCGGAGAAGCGCCAGAGCGCACCAGGTAATTTAAGAAAATACTTAAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGAGCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTg                                                                                                                                                                                                                         <  2:1347693/289‑1 (MQ=255)
                                                                aCCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCa                                                                                                                                                                                                                      >  1:439947/1‑289 (MQ=255)
                                                                 ccAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATCTGCATTGATGGAGTAGTTGACCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTGCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCTGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCag                                                                                                                                                                                                                     <  1:1606354/289‑1 (MQ=255)
                                                                 ccAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCag                                                                                                                                                                                                                     <  1:1111742/289‑1 (MQ=255)
                                                                    gTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAgaga                                                                                                                                                                                                                  >  1:1260816/1‑289 (MQ=255)
                                                                    gTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAgaga                                                                                                                                                                                                                  >  2:1922444/1‑289 (MQ=255)
                                                                      ccTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGagaag                                                                                                                                                                                                                <  1:137997/289‑1 (MQ=255)
                                                                        tACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCGACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAagag                                                                                                                                                                                                              <  1:337404/289‑1 (MQ=255)
                                                                        aacacacCGCGGTGCGCCCCATGTAATTTGACCAAATACTTCAATAGATGCATTGAGGGAGTAGTTGAGCGCCCCGGAAGCATCAAACGAGGCCTGCGATGTCGGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAagag                                                                                                                                                                                                              <  2:374484/288‑1 (MQ=255)
                                                                         acacacGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTTCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCATGCCTAATACCATCAGGGGCAGagaaggtg                                                                                                                                                                                                             >  2:912588/1‑286 (MQ=255)
                                                                         acacacGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGt                                                                                                                                                                                                             >  2:1938465/1‑289 (MQ=255)
                                                                          cacacGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATACCCGCCAGGCCTAATACCATCAGTAGCAGAAAAGAGTg                                                                                                                                                                                                            >  2:1705309/1‑289 (MQ=255)
                                                                               gCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATCAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCAt                                                                                                                                                                                                       >  1:1216452/1‑289 (MQ=255)
                                                                               gCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGcc                                                                                                                                                                                                                                            >  2:502851/1‑252 (MQ=255)
                                                                               gCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGcc                                                                                                                                                                                                                                            <  1:502851/252‑1 (MQ=255)
                                                                               gCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCCGGACCACAACCATCAGTGGCAGGGAAGAGTGACCAt                                                                                                                                                                                                       >  2:1195994/1‑289 (MQ=255)
                                                                               gCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTg                                                                                                                                                                                                                         <  2:268709/271‑1 (MQ=255)
                                                                               gCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGagaag                                                                                                                                                                                                                <  2:1687146/280‑1 (MQ=255)
                                                                               gCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCAt                                                                                                                                                                                                       >  1:191276/1‑289 (MQ=255)
                                                                               gCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCAt                                                                                                                                                                                                       >  1:1536799/1‑289 (MQ=255)
                                                                               gCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCAt                                                                                                                                                                                                       >  2:1296212/1‑289 (MQ=255)
                                                                               gCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGCCGAGAAACAGTTCCGCAAAGCCCATCCACGCCAGGCCCAATAACAACAGTGGCAGAGAAGAGTGAccct                                                                                                                                                                                                       >  2:256862/1‑287 (MQ=255)
                                                                               gCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCAACAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCACAAAGCAGCATGTAGATGCCGGCTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCCCCCCCCGGCCCAATACCATCAGCGGCAGACAAGAGTGAccct                                                                                                                                                                                                       >  2:1403982/1‑287 (MQ=255)
                                                                                  aGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGCTAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAAGACCATCCGTAGCAGACAAGAGAGACCATaaa                                                                                                                                                                                                    >  2:592728/1‑287 (MQ=255)
                                                                                    tGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCggg                                                                                                                                                                                                                                                                             >  1:1882089/1‑214 (MQ=255)
                                                                                    tGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACAtt                                                                                                                                                                                                  >  1:692123/1‑289 (MQ=255)
                                                                                    tGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACAtt                                                                                                                                                                                                  >  1:143716/1‑289 (MQ=255)
                                                                                         cccAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCgg                                                                                                                                                                                              >  2:404461/1‑288 (MQ=255)
                                                                                         cccAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGa                                                                                                                                                                                             >  2:1027968/1‑289 (MQ=255)
                                                                                           cAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGAc                                                                                                                                                                                            >  2:1367544/1‑288 (MQ=255)
                                                                                                 aTTTGATCAAATACTTCAATATAGGCATTGAGGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCggg                                                                                                                                                                                     <  1:1195994/289‑1 (MQ=255)
                                                                                                  tttGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCg                                                                                                                                                                                                                                                             >  2:1750932/1‑216 (MQ=255)
                                                                                                       tCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCACCAGTGGCAGAGAACAGTGACCATACATTGCGGACCAGCGGGGGCTTa                                                                                                                                                                               >  2:796015/1‑289 (MQ=255)
                                                                                                                tCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGTGTAATACGCCGGTAACACAGGGGATTTACATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGACAAGCCCATAACCCCCACGCCTAATACCATCAGTAGCCAAGTAGCGTGACCATACATTGCGGACCAGTGGGCCCTTAAGGtaaaaa                                                                                                                                                                      >  2:1116601/1‑284 (MQ=255)
                                                                                                                        tGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAAt                                                                                                                                                              >  2:1845813/1‑289 (MQ=255)
                                                                                                                         gCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATCCCATCAGTGGCAGAGAAGGGTGACCATACATTGCGGACCAGCGGGCGCTTACGGTCAgcagtccagac                                                                                                                                                              >  2:1666725/1‑278 (MQ=255)
                                                                                                                              gATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGgcg                                                                                                                                                        <  1:558805/289‑1 (MQ=255)
                                                                                                                              gATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGACTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGgc                                                                                                                                                         >  1:285019/1‑288 (MQ=255)
                                                                                                                              gATGGAGTAGTGTATCGCCCCGGAAGAATCAAACGAAGCCTGCGATGTCTGATCGGCAAGCACGCCCGCCAGATAGTTCGCGAACGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGgcg                                                                                                                                                        <  1:1324523/289‑1 (MQ=255)
                                                                                                                               agggggtagtTGATCGCCCCGGAAGCATCAAACGAAGCGTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGgcg                                                                                                                                                        <  2:298319/283‑1 (MQ=255)
                                                                                                                                tGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAagag                                                                                                                                                                                                              <  1:1784738/233‑1 (MQ=255)
                                                                                                                                  gAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCCGCGGGCGCTTAAGGTCAGAATGCAGAATCCGgcggcca                                                                                                                                                    >  1:150084/1‑285 (MQ=255)
                                                                                                                                    gtagtTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGGCAGAATGCAGAATCCGGCGCtcatc                                                                                                                                                  >  1:267997/1‑289 (MQ=255)
                                                                                                                                       gtTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCagag                                                                                                                                                                                                                   <  2:692564/221‑1 (MQ=255)
                                                                                                                                         tGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGcc                                                                                                                                                                                                                                            >  2:1234177/1‑194 (MQ=255)
                                                                                                                                         tGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGcc                                                                                                                                                                                                                                            <  1:1234177/194‑1 (MQ=255)
                                                                                                                                         tGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAagag                                                                                                                                                                                                              >  1:888369/1‑224 (MQ=255)
                                                                                                                                           aTCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCaggccaa                                                                                                                                           >  1:544000/1‑289 (MQ=255)
                                                                                                                                             cGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCaggccaag                                                                                                                                          >  2:622419/1‑288 (MQ=255)
                                                                                                                                               ccccGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATc                                                                                                                                                                                                                             <  1:1248286/203‑1 (MQ=255)
                                                                                                                                               ccccGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCACTGGCAGAGAAGAGAGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCaggccaaggcc                                                                                                                                       >  1:1018393/1‑289 (MQ=255)
                                                                                                                                                                        cgatGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCTAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATgcg                                                                                                               >  2:1586103/4‑288 (MQ=255)
                                                                                                                                                                                             gcccgccAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGaca                                                                                         <  1:809341/289‑1 (MQ=255)
                                                                                                                                                                                              cccgccAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGacac                                                                                        <  1:59678/289‑1 (MQ=255)
                                                                                                                                                                                                            cgcgATGCCGCCAGAAAGACGCATGTAGATGCCGGTTAAAACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTaccacc                                                                          <  2:1536799/289‑1 (MQ=255)
                                                                                                                                                                                                            cgcgATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTaccacc                                                                          <  1:1705309/289‑1 (MQ=255)
                                                                                                                                                                                                            cgcgATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTaccac                                                                           >  2:1312123/1‑288 (MQ=255)
                                                                                                                                                                                                            cgcgATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAAGGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGGTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTaccacc                                                                          <  2:1501796/289‑1 (MQ=255)
                                                                                                                                                                                                             gcgATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGTGTAATTTGCGACAGGGCAACCGGGTCGATAAACAGTTCCGCAAAGCGCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTaccacc                                                                          <  2:1628271/288‑1 (MQ=255)
                                                                                                                                                                                                             gcgATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGaca                                                                                         >  1:1814749/1‑273 (MQ=255)
                                                                                                                                                                                                                 tCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGAGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGc                                                                     <  1:1042291/289‑1 (MQ=255)
                                                                                                                                                                                                                           aaGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAacaca                                                           <  1:758850/289‑1 (MQ=255)
                                                                                                                                                                                                                               agcaTGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCa                                                                                                             >  2:605223/1‑235 (MQ=255)
                                                                                                                                                                                                                               agcaTGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCg                                                        <  2:447980/288‑1 (MQ=255)
                                                                                                                                                                                                                               agcaTGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCg                                                        >  1:485315/1‑288 (MQ=255)
                                                                                                                                                                                                                               agcaTGGAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCg                                                        <  1:1930312/288‑1 (MQ=255)
                                                                                                                                                                                                                                 caTGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGcac                                                     >  1:1732697/1‑289 (MQ=255)
                                                                                                                                                                                                                                 aaTGTAGAGGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGAAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGca                                                      <  2:1732697/287‑1 (MQ=255)
                                                                                                                                                                                                                                  aTGGAGTTGCCGGGTAATCCGCCGGTCAACCCGGGGATTTAAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGca                                                      <  2:1899080/287‑1 (MQ=255)
                                                                                                                                                                                                                                      aGATGCCGGTTAATACGCCGGTAACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCAt                                                <  1:1677941/289‑1 (MQ=255)
                                                                                                                                                                                                                                         tGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATaa                                              <  1:1837394/288‑1 (MQ=255)
                                                                                                                                                                                                                                             ggTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCg                                         >  2:665937/1‑289 (MQ=255)
                                                                                                                                                                                                                                              ggtaaagcggcGGTCACACCGGGGGTTTCAAGGCGCGTAAGTTGCGGCATGGCAACCGGGTCGATGAACAGGTCCGGAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCg                                         <  2:1815443/278‑1 (MQ=255)
                                                                                                                                                                                                                                              gTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCaggccaaggcc                                                                                                                                       <  2:551248/194‑1 (MQ=255)
                                                                                                                                                                                                                                              gTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGa                                        >  2:1250213/1‑289 (MQ=255)
                                                                                                                                                                                                                                               ttAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCCTAACTGCGaa                                       >  1:657573/1‑289 (MQ=255)
                                                                                                                                                                                                                                               ttAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACACTCTTTTACCACCCACGCCAGGAACACACCCCACAGCATAACTCCGaa                                       >  1:1630210/1‑289 (MQ=255)
                                                                                                                                                                                                                                                tAATACGCCGGTAAGACCGAGAATTTCCAAAGGGGTAATTTGCGAAATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCAGCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGaa                                       <  2:115561/288‑1 (MQ=255)
                                                                                                                                                                                                                                                       ctgttaccacaGGTGATTTCAATGAGAGTAATTTGCTACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAGTACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTaa                               <  1:95628/282‑1 (MQ=255)
                                                                                                                                                                                                                                                         ggTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAAtc                             >  1:865088/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                     gATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCGACTGGAACAt                  <  1:1946340/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                        ttCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCGACTGGAACATcgcg              >  1:622564/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                         tCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTaccacc                                                                          <  2:1386748/228‑1 (MQ=255)
                                                                                                                                                                                                                                                                          cAATGCGCGTAATTTGGGACATGGAAACCGGGTCCATAAACAGTTCCGGAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCGACTGGAACATCGCGGt            <  2:745730/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                             tGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCGACTGGAACATCGCGGTCgg         >  2:1868313/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                              gggcgTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCGACTGGAACATCGCGGTCGGa        <  1:223392/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                              gggcgTAATTTGCGAAATGGAAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCAGCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCACTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCGACTGGAACATCGCGGTCGGa        <  2:222398/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                                gcgTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCGACTGGAACATCGCGGTCGGaa       <  1:1401283/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                        
TTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAAGCTAGCCTGGCTTGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGGCTCATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAGCAAATTTCCCCCAGATGCGCACGGTACGATTACCCGCGACACTCTCTTTTACCACCCACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATGCTCTGGAACATCGCGGTCGGAACGGTA  >  CP042583/603909‑604473

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A