Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F210 I1 R1
|
4929 |
268.4 |
3907572 |
96.3% |
3762991 |
273.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
610,827 |
3 bp→CGA |
intergenic (–/–) |
– / – |
–/– |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 610,827 | 0 | G | C | 99.5%
| 511.4
/ ‑4.9
| 219 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (116/102); minor base . (1/0); total (117/102) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 |
| * | CP042583 | 610,828 | 0 | C | G | 99.5%
| 507.7
/ NA
| 219 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base G (116/101); total (117/102) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 |
| * | CP042583 | 610,829 | 0 | T | A | 99.5%
| 513.7
/ NA
| 219 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (116/102); minor base G (1/0); total (117/102) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 |
Only 100 of 219 total aligned reads displayed.
CCAATAGAAAGGAGAAGACTTAGCACACATAACATTCCCCACTGCAAAACTGGCATCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGAGCTAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGGCTGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTCGTTTTAATACTGAACGTTTTGCTCATTGTGTGGCGACGTATATCCAGCA > CP042583/610548‑611104
|||
ccAATAGAAAGGAGAAGTGATAGCACACATAACATTCCCCACTGCAAAACTGGCATCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCa < 1:1665110/289‑1 (MQ=255)
cAATAGAAAGGAGAAGTGATAGCACACATAACATTCCCCACTGCAAAACTGGCATCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAg < 1:564265/289‑1 (MQ=255)
atAGCACACATAACATTCCCCACTGCAAAACTGGCATCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGt > 1:1483938/2‑289 (MQ=255)
atAGCACACATAACATTCCCCACTGCAAAACTGGCATCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGCTTTTTCGt > 1:1552128/2‑289 (MQ=255)
aGCACACATAACATTCCCCACTGCAAAACTGGCATCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAg > 2:852415/1‑289 (MQ=255)
cacacaTAACATTCCCCACTGCAAAACTGGCATCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGAc < 2:1607007/289‑1 (MQ=255)
cacacaTAACATTCCCCACTGCAAAACTGGCATCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGAc < 2:1659440/289‑1 (MQ=255)
aTAACATTCCCCACTGCAAAACTGGCATCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTAAAGGTTTTTACGTACACCAACa > 2:820970/1‑289 (MQ=255)
aCATTACCCACGGCAAAAATGGCATCCATAGCTCCCGAATTATTTTCTCTTTGGTGTATCGATACAGAATAAAGAAAGCTAGGCCAGGAAAAAAAAACAGCAATCGAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTGTCCGGCGGAAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TGCAGCCGTATAGGTTTTTTCGTAGACCAACATGt < 2:1473872/289‑1 (MQ=255)
tCCCCACTGCAAAACTGGCATCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTc > 1:1269533/1‑286 (MQ=255)
cccACTGCAAAACTGGCATCCTTCGCCCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTCGGCCCGGAAAAAATAACAGCAATCAGGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCACTTTCCGGCGGCAAAGGGCATCATGGTAAACCAGTAATAGTTAATCTTACAAAGCACCACTCTATCGAAGTGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TGCAGCAGTATAGGTTTTTCAGTAGAACAACATTGCACTgg > 2:190545/1‑289 (MQ=255)
ccACTGCAAAACTGGCATCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCa > 1:490022/1‑284 (MQ=255)
ccACTGCAAAACTGGCATCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCAGTGGt > 1:330041/1‑289 (MQ=255)
ccACTGCAAAACTGGCATCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCAACACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTGTTTTCGTAGACCAACATGTCACAGGt > 1:572354/1‑289 (MQ=255)
ccACTGCAAAACTGGCACCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGtat > 1:1713776/1‑258 (MQ=255)
aCTGCAAAACTGGCATCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGAACCACTGTATCGAAGGGGCCAGCCTAGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTGTCGTAGACCAACATGTCACTGGTGa > 2:968951/1‑289 (MQ=255)
tGCAAAACTGGCCTCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGaaa < 2:1231776/289‑1 (MQ=255)
tGCAAAACTGGCATCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGaaa < 1:1216597/289‑1 (MQ=255)
tGCAAAACTGGCATCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGaaa < 1:380488/289‑1 (MQ=255)
tGCAAAACTGGCATCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGaaa < 2:530126/289‑1 (MQ=255)
tGCAAAACTGGCATCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCAAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGACGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGAGGGGGGTGCCTGGAATGGA‑CGAAGTTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTACCTGGTGaaa > 2:1420350/1‑289 (MQ=255)
gCAAAACTGGCATCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGaaa > 1:1338735/1‑288 (MQ=255)
cTGGAATCCTTCGGTCCCTCATTTTTTTCTCTTTAGTGTAACGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAGAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGt < 2:933999/289‑1 (MQ=255)
gCATCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCTTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAAACCGACATGTCACTGGTGAAATCGGCGtct > 2:1015377/1‑286 (MQ=255)
aTCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTc < 1:1751433/288‑1 (MQ=255)
tCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTTGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAg < 2:1885217/289‑1 (MQ=255)
tcggccccTAATTATGTTTGTTTTGGTGATTCGATAAAGCAGAAAGAAAGCTGGACCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCata < 2:1780635/284‑1 (MQ=255)
cGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATACCAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGACAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCCGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TACGTCCGTATAGGTTTTTTGGTAGACCAACATGACCCTGGTGAAATCTGAGTATTCAGCatat > 2:1140258/1‑289 (MQ=255)
cTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTg < 1:661974/289‑1 (MQ=255)
cTCATTATTTTCTCTTTGGTGTATAGATACAGCATAAAGAAAGCTGGGCCAAGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTg < 1:363838/289‑1 (MQ=255)
tCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTg < 2:33349/288‑1 (MQ=255)
tCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGa < 1:1905089/289‑1 (MQ=255)
tCATTATTTTCTCTTTAGGGTATCGATACAGCATAAAGGAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAGAGGGGAAAATCAGCAATTTTCTGAAAGGGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGa < 2:1949389/289‑1 (MQ=255)
ttGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAATGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCTGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAggcgag > 2:208775/1‑285 (MQ=255)
cGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGAGTTTTCa > 2:652192/1‑289 (MQ=255)
aTACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCAt > 1:212746/1‑288 (MQ=255)
cAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTAGAGGCTTTTTCGTAGACCAACATGTACCTGGTGAAATCGGCGTATTAAGCATATTTATGGAAGGTATACGGCGAGGAGTTTTCATCAAg > 1:1856173/1‑289 (MQ=255)
agaaagCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCGGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGt > 1:1080125/1‑205 (MQ=255)
agaaagCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTa > 2:1310344/1‑289 (MQ=255)
agaaagCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATAAGTTATAGTTAATATTAAAAATCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTGCGTAGACCAACATGTCACTGGGGAAATCGGCGTATTCAGCATATTCATTGAAGGTATCAGGCGATGCGTTTTCATCCAGAAAACGTa > 2:262644/1‑289 (MQ=255)
gggCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAACCTTAAAAAGCACCACTGTATCGAAGGGGCGAGCCTCGCTGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGATCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATCAGGCGAGGAGTTTTCATCCAGTAAACGTAGCTGCAg > 2:593035/1‑288 (MQ=255)
ggCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGa < 2:1842355/288‑1 (MQ=255)
aaCAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGTCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATcaac < 2:568967/289‑1 (MQ=255)
acaacaAACAAGGCAAAGGGTAAAATCAGCAATTTTCTGAAAGAGAGGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATcaaca < 2:789610/289‑1 (MQ=255)
aTCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCtt > 1:452640/1‑289 (MQ=255)
aTCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCtt > 2:1103828/1‑289 (MQ=255)
aaaGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTAtcttct > 1:742533/1‑289 (MQ=255)
aaGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTAt < 1:1575405/283‑1 (MQ=255)
gAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTcaacc > 1:208869/1‑289 (MQ=255)
aaTCGGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGACAAAGGGCATCATGGTAAATCAGTTATAGTTAAGCGTAAAAAGCACCACGGTATCGAAGGGGCCAGCCTCGATTGGGGGGCCTGGAATGGACGAAAG‑GTCAGCCGTATAGGGGTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTGAGTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTcaaccaac < 1:1140258/289‑1 (MQ=255)
aTTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTttcttc < 1:39231/289‑1 (MQ=255)
aaGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATaaa < 2:1723026/288‑1 (MQ=255)
cggcAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTaaa > 1:1740246/1‑289 (MQ=255)
cAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATc < 1:1511833/288‑1 (MQ=255)
aaGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGt < 1:852415/289‑1 (MQ=255)
aGGGCAGCAGGGTAAATCAGTTATAGTTAATCTTGAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTc < 2:354250/289‑1 (MQ=255)
aaTCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGt > 1:1953384/1‑289 (MQ=255)
aaTCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGt > 1:1689780/1‑289 (MQ=255)
ttATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAACTCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAACCCGTCGGTGCCTGGATCGTTTTggt > 2:1899776/1‑288 (MQ=255)
ttATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGTTGCATTGATCGTTTTg > 1:765298/1‑287 (MQ=255)
ttATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTg > 2:70405/1‑287 (MQ=255)
ttATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTg > 1:1043562/1‑287 (MQ=255)
ttAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGTTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTgg > 1:1815347/1‑289 (MQ=255)
aaTCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTc > 2:921299/1‑289 (MQ=255)
aaTCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTc > 1:261313/1‑289 (MQ=255)
tCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATc < 2:1858485/255‑1 (MQ=255)
tCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTCGt > 1:1173942/1‑289 (MQ=255)
tCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTCGt > 2:1624957/1‑289 (MQ=255)
caccacTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTCGTTTTAATACTg > 1:1443744/1‑289 (MQ=255)
aactcatggttggAAGGGGCCAGCCTCGATGGGGGTGGCTGGAATGGACGAAAG‑TTAAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTCGTTTTAATACTg < 2:1862121/277‑1 (MQ=255)
accacTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTCGTTTTAATACTGa < 1:1015377/289‑1 (MQ=255)
cTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTCGTTTTAATACTGAACGt > 2:403039/1‑289 (MQ=255)
tATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTCGTTTTAATACTGAACGtttt > 1:46961/1‑289 (MQ=255)
aaGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTCGTTTTAATACTGAACGttttcgaca > 2:1331274/1‑284 (MQ=255)
aGGTGCCAGCCTCGATGGGGGTGCCTGGAATGGACTAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTCGTTTTAATACTGAACGttttcgaca < 2:1295798/288‑6 (MQ=255)
aGGGGCCAGCGTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTCGTTTTAATACTGAACGttttcgaca < 2:1361834/288‑6 (MQ=255)
aGGGGCCAGCCTTGATTGGGGGGCCTGGAATGGGCGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTCGTTTTAATACTGAACGttttcgaca < 1:797080/288‑6 (MQ=255)
aGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTCGTTTTAATACTGAACGttttcgaca < 2:1396845/288‑6 (MQ=255)
aGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTCGTTTTAATACTGAACGttttcgaca < 1:1103828/288‑6 (MQ=255)
ggggCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTCGTTTTAATACTGAACGttttcgacatt > 2:556687/1‑282 (MQ=255)
ggggCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGCCGTTTTAATACTGCACGttttcgacatg > 2:1805662/1‑282 (MQ=255)
gggCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTCGTTTTAATACTGAACGttttcgacattg > 1:67315/1‑281 (MQ=255)
gggCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTCGTTTTAATACTGAACGttttcgacatgg > 2:733132/1‑281 (MQ=255)
gCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGt > 1:161420/1‑258 (MQ=255)
gCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTCGTTTTAATACTGAACGTTTTCGACATtgtg > 1:1843783/1‑289 (MQ=255)
gCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTCGTTTTAATACTGAACGTTTTCGACATtgtg > 1:1303665/1‑289 (MQ=255)
gCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTCGTTTTAATACTGAACGTTTTCGACATtgtg > 2:768702/1‑289 (MQ=255)
ccAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTCGTTTTAATACTGAACGTTTTCGACATtgtg < 2:1043562/288‑1 (MQ=255)
cAGCCTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTCGTTTTAATACTGAACGTTTTCGACATtgtgtg < 1:70405/289‑1 (MQ=255)
atccTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTCGTTTTAATACTGAACGTTTTCGACATTGTGTgg < 1:92840/287‑1 (MQ=255)
gcgcGAGGGGGGTGGCGGGAATTGACGAAAA‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTCGTTTTAATACTGAACGTTTTCGACATTGTGTGGc < 2:1542483/285‑1 (MQ=255)
ccTCGATTGGGGTGCCTGGAAGGGACGAAAG‑TTAAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCTGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCACCAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAATTGACTTTAAATCCGTCGGTGCGTTGATCGTTTTGGCTCTTGGTCGTTTGAATACTGAACGTTTTCGACATTGTGGGGc < 2:370661/288‑1 (MQ=255)
ccTCGATGGGGGTGCCTGGAATGGGCGAAAG‑TTCAGCCGTATATGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGTCTCTTGGTCGTTTTAATACTGAACGTTTTCGACATTGTGTGGc < 2:572354/288‑1 (MQ=255)
cTCGATGGGGGTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTCGTTTTAATACTGAACGTTTTCGACATTGTGTGGc < 1:984895/287‑1 (MQ=255)
gcGATGGGGGTGCCTGGAATGGACGAAAC‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGGAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATGAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTCGTTTTAATACTGAACGTTTTCGACATTGTGTGGCGAc < 1:952811/288‑1 (MQ=255)
ggTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTCGTTTTAATACTGAACGTTTTCGACATTGTGTGGCGACGTATATcc > 1:1830199/1‑289 (MQ=255)
gTGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTCGTTTTAATACTGa > 2:1696929/1‑256 (MQ=255)
tGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTCGTTTTAATACTGAACGTTTTCGACATTGTGTGGCGACGTATATCCa < 1:1335447/288‑1 (MQ=255)
tGCCTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTCGTTTTAATACTGAACGTTTTCGACATTGTGTGGCGACGTATATCCa < 2:46961/288‑1 (MQ=255)
ccTGGAATGGACGAAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGCGAGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTCGTTTTAATACTGAACGTTTTCGACATTGTGTGGCGACGTATATCCAGCa > 1:618010/1‑289 (MQ=255)
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CCAATAGAAAGGAGAAGACTTAGCACACATAACATTCCCCACTGCAAAACTGGCATCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGAGCTAAG‑TTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTGAAATCGGCGTATTCAGCATATTTATTGAAGGTATAAGGGCTGGCGTTTTCATCCAGTAAACGTAGCTTCAGACCATTACCAATCAACAATGCTTTATCTTCTTCAACCAACGTTTCTTCGGTATAAAAGGAGGAACTGACTTTAAATCCGTCGGTGCATTGATCGTTTTGGCTCTTGGTCGTTTTAATACTGAACGTTTTGCTCATTGTGTGGCGACGTATATCCAGCA > CP042583/610548‑611104
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A