Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 669,201 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583669,2010AT98.8% 604.4 / NA 258intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (128/125);  minor base G (0/3);  total (129/129)
Fisher's exact test for biased strand distribution p-value = 2.47e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583669,2020CG99.6% 605.6 / NA 258intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (128/128);  total (129/129)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583669,2030TA99.2% 604.4 / NA 258intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (126/129);  minor base C (2/0);  total (129/129)
Fisher's exact test for biased strand distribution p-value = 2.47e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 258 total aligned reads displayed.

ATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTT‑CGTTGATGGCGCTATCACGGATCACCACC‑TGACCGTTGGTATTGGCATCAACATCCAGGC‑TGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGACTGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAATCTGTACCTGGTCACCATCAGTACGCAGTGCCACCGCCGGATGGTTACCTGCATCTACGCTATCGCCCAGCGTGTTTTCGATGGTCA  >  CP042583/668926‑669478
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                    
         ttATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTT‑CGTTGATGGCGCTATCACGGATCACCACC‑TGACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCgg                                                                                                                                                                                                                                                                  >  1:704360/1‑289 (MQ=255)
         ttATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTT‑CGTTGATGGCGCTATCACGGATCACCACC‑TGACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCgg                                                                                                                                                                                                                                                                  >  2:880868/1‑289 (MQ=255)
         ttATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTT‑CGTTGATGGCGCTATCACGGATCACCACC‑TGACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGACGGTGCAAACACATACGCTTCTTGCTGAGTACGTGCGTTAACCACGCGGAATTCgg                                                                                                                                                                                                                                                                  >  2:125589/1‑289 (MQ=255)
           atcatcTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTT‑CGTTGATGGCGCTATCACGGATCACCACC‑TGACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGgtg                                                                                                                                                                                                                                                                <  1:418690/289‑1 (MQ=255)
                   cGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTT‑CGTTGATGGCGCTATCACGGATCACCACC‑TGACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCACCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGaa                                                                                                                                                                                                                                                        <  2:1458056/289‑1 (MQ=255)
                                aCCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTT‑CGTTGATGGCGCTATCACGGATCACCACC‑TGACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑cgcc                                                                                                                                                                                                                                           >  2:1470471/1‑288 (MQ=255)
                                  ccGCAACCGGACGATTAGAGATCACCCGATCGGCCCCCGGTTTAGCCGTGTTAAAACCTT‑CGTTGATGGCCCTATCACGGATCACCACC‑TGGCCGTTGGGATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCcgcg                                                                                                                                                                                                                                        <  2:827264/289‑1 (MQ=255)
                                  ccGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTT‑CGTTGATGGCGCTATCACGGATCACCACC‑TGACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCcgcg                                                                                                                                                                                                                                        >  1:235420/1‑289 (MQ=255)
                                      aaaCGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTT‑CGTTGATGGCGCTATCACGGATCACCACC‑TGACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTcaccac                                                                                                                                                                                                                                                                             >  1:436274/1‑249 (MQ=255)
                                      aaaCGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTT‑CGTTGATGGCGCTATCACGGATCACCACC‑TGACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTcaccac                                                                                                                                                                                                                                                                             <  2:436274/249‑1 (MQ=255)
                                          ggACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTT‑CGTTGATGGCGCTATCACGGATCACCACC‑TGACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGaaa                                                                                                                                                                                                                                <  2:720447/289‑1 (MQ=255)
                                                ttAGAGACCCCCGCATCGGCCCACGGTTTAGCCGGGTTAAACCCTT‑CGTGGATGGCGCTATCACGGATCACCACC‑TGACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGata                                                                                                                                                                                                                           <  2:1204419/288‑1 (MQ=255)
                                                       tCACCGCGTCGGCCCACGGTTTAGCCGTGTTAAAACCTT‑CGTTGATGGCGCTATCACGGATCACCACC‑GGACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACAACATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCcaca                                                                                                                                                                                                                     <  2:1688206/287‑1 (MQ=255)
                                                       tCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTT‑CGTTGATGGCGCTATCACGGATCACCACC‑TGACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACAt                                                                                                                                                                                                                    <  1:333057/288‑1 (MQ=255)
                                                        cACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTT‑CGTTGATGGCGCTATCACGGATCACCACC‑TGACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTCCCCCCCCCCACCACCGAAACCATTGAACGGGCGGTTACCGCGGGGGAACCCGAAGAAATGGTTGGAAAGGGAAGCCGGT‑CAAACACATAAGCCTCCTTCTTAATAAGTGGGTTCCACCCCCGGAATTCGGTTGTATCCAACCCCACTGCCCCCGCGACCAGaaccaaaaccacactc                                                                                                                                                                                                                   >  2:687911/1‑274 (MQ=255)
                                                            gCATCGGCCCACGGTTTAGCCGTGTTAAAACCTT‑CGTTGATGGCGCTATCACGGATCACCACC‑TGACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCtt                                                                                                                                                                                                              <  1:658485/289‑1 (MQ=255)
                                                             cATCGGCCCACGGTTTAGCCGTGTTAAAACCTT‑CGTTGATGGCGCTATCACGGATCACCACC‑TGACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTc                                                                                                                                                                                                             >  1:1129063/1‑289 (MQ=255)
                                                                     cACGGTTTAGCCGTGTTAAAACCTT‑CGTTGATGGCGCTATCACGGATCACCACC‑TGACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACg                                                                                                                                                                                                                              <  2:1933091/264‑1 (MQ=255)
                                                                     cACGGTTTAGCCGTGTTAAAACCTT‑CGTTGATGGCGCTATCACGGATCACCACC‑TGACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACg                                                                                                                                                                                                                              >  1:1933091/1‑264 (MQ=255)
                                                                        ggTTTAGCCGTGTTAAAACCTT‑CGTTGATGGCGCTATCACGGATCACCACC‑TGACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGt                                                                                                                                                                                                  >  1:1154537/1‑289 (MQ=255)
                                                                             aGCCGTGTTAAAACCTT‑CGTTGATGGCGCTATCACGGATCACCACC‑TGACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTCTTGGTc                                                                                                                                                                                             >  1:1309972/1‑289 (MQ=255)
                                                                                cGTGTTAAAACCTT‑CGTTGATTGCGCTATCACGGATCACCACC‑TGACCTTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCa                                                                                                                                                                                            <  1:1228880/287‑1 (MQ=255)
                                                                                 gggtTAAAACCTTCCGTGGAGGGCGCT‑TCACGGATCACCACCTTGCCCTTGGGTATTGGCA‑CAACAACCAAGCGAGCGG‑CCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCa                                                                                                                                                                                         <  1:687911/287‑1 (MQ=255)
                                                                                    ttAAAACCTT‑CGTTGATGGCGCTATCACGGATCACCACC‑TGACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCAcg                                                                                                                                                                                                                                                                            <  2:1130783/204‑1 (MQ=255)
                                                                                               cGTTGATGGCGCTATCACGGATCACCACC‑TGACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTg                                                                                                                                                                            >  1:407100/1‑289 (MQ=255)
                                                                                                               acggctgcccacc‑TGCCCGGTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTTCGCCACACCATCGCCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCATCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGa                                                                                                                                                            <  2:369674/281‑1 (MQ=255)
                                                                                                               aCGGATCACCACC‑TGACCGTTGTTATTGGCATCAACATCCAGAG‑AGCGGCCCCGTTGCGCCACACCATCAACGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGa                                                                                                                                                            <  1:1532105/289‑1 (MQ=255)
                                                                                                               aCGGATCACCACC‑TGACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGa                                                                                                                                                            <  1:1716849/289‑1 (MQ=255)
                                                                                                               aCGGATCACCACC‑TGACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGa                                                                                                                                                            <  2:407100/289‑1 (MQ=255)
                                                                                                                  gATCACCACC‑TGACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACgg                                                                                                                                                         >  1:1805866/1‑289 (MQ=255)
                                                                                                                   aTCACCACC‑TGACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACTAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGt                                                                                                                                                        >  1:388357/1‑289 (MQ=255)
                                                                                                                       ccacc‑TGACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCg                                                                                                                                                                                                                                                          >  2:158215/1‑188 (MQ=255)
                                                                                                                       ccacc‑TGACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATcccc                                                                                                                                                                                                                >  2:137025/1‑229 (MQ=255)
                                                                                                                       ccacc‑TGACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATcccc                                                                                                                                                                                                                <  1:137025/229‑1 (MQ=255)
                                                                                                                       ccacc‑TGACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCt                                                                                                                                                     >  2:239409/1‑288 (MQ=255)
                                                                                                                       ccacc‑TGACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGAGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGgtgt                                                                                                                                                                                                                                                               <  2:339410/183‑1 (MQ=255)
                                                                                                                         cacacgaacGTTGGTATTGGCATCAACATCCAGCG‑GACGGCCAAGTTGCGAGACACCATCAACGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAAACGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCGTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTGATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGa                                                                                                                                                            <  2:1898540/272‑1 (MQ=255)
                                                                                                                           c‑TGACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGcaca                                                                                                                                                <  1:915678/289‑1 (MQ=255)
                                                                                                                              gACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGCTTCGTTTCCAGCCGGTTTTGCacac                                                                                                                                               >  2:1311089/1‑288 (MQ=255)
                                                                                                                              gACCGTTGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACAcc                                                                                                                                              >  1:343058/1‑289 (MQ=255)
                                                                                                                                   ttGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAACCGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGCCGATTCGTTTCCATCCGGTTCTGca                                                                                                                                                  >  1:1898540/1‑280 (MQ=255)
                                                                                                                                   ttGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCa                                                                                                                                                                                            <  2:1033912/238‑1 (MQ=255)
                                                                                                                                   ttGGTATTGGCATCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCa                                                                                                                                                                                            >  1:1033912/1‑238 (MQ=255)
                                                                                                                                              aTCAACATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTAACCAGCGTACGCGGCTGAAGATTCGTTTCCAGACGGTTCTGCCCACCGCTGTTGTTGACAaag                                                                                                                              >  1:842162/1‑289 (MQ=255)
                                                                                                                                                 aaCATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATAGCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCAGACGATTCGTTTCCAGACGGTTGTGCACACCGCTTTTGGTGCCAaaggag                                                                                                                           >  2:559913/1‑289 (MQ=255)
                                                                                                                                                   cATCCAGCG‑AGCGGCCCAGTTGCGCCACACCATCACCGCAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGgt                                                                                                                         <  1:1174350/289‑1 (MQ=255)
                                                                                                                                                       ccagcgagCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGgtgt                                                                                                                       >  1:501283/8‑288 (MQ=255)
                                                                                                                                                       ccagcgagCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCGGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGtt                                                                                                                      >  2:803065/8‑289 (MQ=255)
                                                                                                                                                           cgagCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTg                                                                                                                   >  2:1763728/4‑288 (MQ=255)
                                                                                                                                                            gagtggCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTGTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCt                                                                                                                    <  1:46039/282‑1 (MQ=255)
                                                                                                                                                            gagCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGa                                                                                                                                                            >  2:1113054/3‑246 (MQ=255)
                                                                                                                                                            gagCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGa                                                                                                                                                            <  1:1113054/244‑1 (MQ=255)
                                                                                                                                                               cGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACTCTATCCACATCCCCTTCAATGTACCTGTTGCTCACCAGCGTACGCGGCTGACGATTCGTCTCCAGACGGTTCTTCACACCGCTGTTGGGGACAAAGGAGGTGTTCTgacga                                                                                                               >  2:1825560/1‑288 (MQ=255)
                                                                                                                                                                   ccAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCgag                                                                                                          <  1:859611/289‑1 (MQ=255)
                                                                                                                                                                           gcCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTaa                                                                                                  <  1:1222391/289‑1 (MQ=255)
                                                                                                                                                                           gcCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTaa                                                                                                  <  1:1731916/289‑1 (MQ=255)
                                                                                                                                                                            ccACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACg                                                                                                                                                          >  2:666771/1‑232 (MQ=255)
                                                                                                                                                                            ccACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAAc                                                                                                 >  1:783291/1‑289 (MQ=255)
                                                                                                                                                                            ccACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAAc                                                                                                 >  1:473160/1‑289 (MQ=255)
                                                                                                                                                                            ccACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAAc                                                                                                 >  1:1574881/1‑289 (MQ=255)
                                                                                                                                                                                acCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTa                                                                                                                                                                                    <  1:1037270/202‑1 (MQ=255)
                                                                                                                                                                                acCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTa                                                                                                                                                                                    >  2:1037270/1‑202 (MQ=255)
                                                                                                                                                                                    tCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTaa                                                                                         >  1:1745393/1‑289 (MQ=255)
                                                                                                                                                                                     cACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCAGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAAt                                                                                        <  1:84453/289‑1 (MQ=255)
                                                                                                                                                                                          aaaGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGCCGATTCGTTTCCAGACGGTTCTGCAC‑CCGCTGTGGGTGACAAAGAAGGTGTTCGGACGACCGAGAATGTTAAGGTGGTTAATCTGTa                                                                                   >  2:693660/1‑288 (MQ=255)
                                                                                                                                                                                          aaaGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAATCTGt                                                                                    >  1:932841/1‑288 (MQ=255)
                                                                                                                                                                                           aaGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAAAGGTAACGTTGTTCAGCTGTa                                                                                   >  2:843861/1‑288 (MQ=255)
                                                                                                                                                                                            aGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAATCTGTa                                                                                   >  1:1829108/1‑287 (MQ=255)
                                                                                                                                                                                                ttGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAATCTGTACCTGGt                                                                             <  1:1580037/289‑1 (MQ=255)
                                                                                                                                                                                                ttGAAACGGCGGTTTAAGGCGGGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAATCTGTACCTGGt                                                                             <  2:759280/289‑1 (MQ=255)
                                                                                                                                                                                                 tGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTTCACACCGCTGTTGGTGGCAAGGAAGGGGTTCTGACGACGGAGAATGTTACGGTTGTTAATCGGTACCTGGt                                                                             >  2:578844/1‑288 (MQ=255)
                                                                                                                                                                                                 tGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAATCTGTACCTGGTc                                                                            <  1:1549906/289‑1 (MQ=255)
                                                                                                                                                                                                    aaCGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAATCTGTACCTGGTCAc                                                                          <  1:1138551/288‑1 (MQ=255)
                                                                                                                                                                                                    aaCGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAATCTGTACCTGGTCAc                                                                          <  2:1727701/288‑1 (MQ=255)
                                                                                                                                                                                                    aaCGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAATCTGTACCTGGTCAc                                                                          <  1:1783505/288‑1 (MQ=255)
                                                                                                                                                                                                      cGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAATCTGTACCTGGTCACCAt                                                                       <  1:803065/289‑1 (MQ=255)
                                                                                                                                                                                                         cTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAATCTGTACCTGGTCAc                                                                          <  2:1154212/283‑1 (MQ=255)
                                                                                                                                                                                                                   cGAGGAAACCGTAGTAAACGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAATCTGTACCTGGTCACCATCAGTACGCAGTg                                                           >  2:1280809/1‑288 (MQ=255)
                                                                                                                                                                                                                    gAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAATCTGTACCTGGTCACCATCAGTACGCAGTGc                                                          <  1:244731/288‑1 (MQ=255)
                                                                                                                                                                                                                      ggAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAATCTGTACCTGGTCACCATCAGTACGCAGTGCCa                                                        >  1:733731/1‑288 (MQ=255)
                                                                                                                                                                                                                            cGTAGTAAATGTTGAGCAGCGTAGCCGGTGCAAAGCCAGTCGCTTCTTGGTGAGTACGTGAGTTCACCAAGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCCCATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAATCTGTACCTGGTCACCATCAGTACGCAGTGCCACCGCCgg                                                 <  2:431559/289‑1 (MQ=255)
                                                                                                                                                                                                                            cGTAGTAAACGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAATCTGTACCTGGTCACCATCAGTACGCAGTGCCACCGCCgg                                                 <  1:1280809/289‑1 (MQ=255)
                                                                                                                                                                                                                               agtaAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAATCTGTACCTGGTCACCATCAGTACGCAGTGCCACCGCCGGATg                                              >  2:32850/1‑289 (MQ=255)
                                                                                                                                                                                                                                 tgagagTTGGACAGCCTAGCCGGTGCAATCACAGACGCTTCTTGCTGAGTACTGGAGGTACCCACACGGAATTCGGTGTTATCGAACACCACTG‑AGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAATCTGTACCTGGTCACCATCAGTACGCAGTGCCACCGCCGGATgg                                             <  2:505282/283‑1 (MQ=255)
                                                                                                                                                                                                                                    aTGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAATCTGTACCTGGTCACCATCAGTACGCAGTGCCACCGCCGGATGGTTAc                                         <  1:218838/289‑1 (MQ=255)
                                                                                                                                                                                                                                     tGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAATCTGTACCTGGTCACCATCAGTACGCAGTGCCACCGCCGGATGGTTAcc                                        <  1:1418343/289‑1 (MQ=255)
                                                                                                                                                                                                                                              gCGTGGCCGGTGCAAACAACTGCTCGTCTTGCTGAGTACGGGAGTTCGCCACGCGGCATTCGGTGTTATCGAACACCACGT‑GGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGGTGGTCACCAGCGTACGCCGCTGACGATTCGTGTCCAGACGGTTCTGCACACCGCTGGTTGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAATCTGTACCTGGTCACCATCAGTACGCAGTGCCACCGCCGGATGGTTACCTGCATCTa                                <  2:39653/288‑1 (MQ=255)
                                                                                                                                                                                                                                               cGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGCTAACGTTGTTAATCTGTACCTGGTCACCATCAGTACGCAGTTCCACCTCCGGATGATTACCTGCATCTAc                               >  2:288654/1‑288 (MQ=255)
                                                                                                                                                                                                                                                 tAGCCGGTGCAAACACATACGCTTCTTGCTTAGTACGTGAGTTCACCACGCGGAAGTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGCATCGTTTCCATACGGTTCTTCACACCGCTGGTGGCGACATAGAAGCTGTTCCGACGACCGAGGATGTTAACGGTGTAAATCTGTACCGCGTCCCCATCATTACTCACTCCCACCGCCGGATTGTTACCTGCATCTatctc                            >  2:1621395/1‑285 (MQ=255)
                                                                                                                                                                                                                                                  aGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAATCTGTACCTGGTCACCATCAGTACGCAGTGCCACCGCCGGATGGTTACCTGCATCTACGCTa                           <  2:1805866/289‑1 (MQ=255)
                                                                                                                                                                                                                                                        tGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGACACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAATCTGTACCTGGTCACCATCAGTACGCAGTGCCACCGCCGGATGGTTACCTGCATCTACGCTATCGcc                      <  1:288654/288‑1 (MQ=255)
                                                                                                                                                                                                                                                        tGCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAATCTGTACCTGGTCACCATCAGTACGCAGTGCCACCGCCGGATGGTTACCTGCATCTACGCTATCGccc                     >  1:1676206/1‑289 (MQ=255)
                                                                                                                                                                                                                                                         gCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAATCTGTACCTGGTCACCATCAGTACGCAGTGCCACCGCCGGATGGTTACCTGCATCTACGCTATCGccc                     >  2:1518620/1‑288 (MQ=255)
                                                                                                                                                                                                                                                         gCAAACACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAATCTGTACCTGGTCACCATCAGTACGCAGTGCCACCGCCGGATGGTTACCTGCATCTACGCTATCGCCCa                    >  1:268089/1‑289 (MQ=255)
                                                                                                                                                                                                                                                           aaaCACATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAATCTGTACCTGGTCACCATCAGTACGCAGTGCCACCGCCGGATGGTTACCTGCATCTACGCTATCGCCCAGc                  <  1:578844/289‑1 (MQ=255)
                                                                                                                                                                                                                                                             acacATACGCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAATCTGTACCTGGTCACCATCAGTACGCAGTGCCACCGCCGGATGGTTACCTGCATCTACGCTATCGCCCAGCgt                >  1:1490612/1‑289 (MQ=255)
                                                                                                                                                                                                                                                               cactACGCTTCTTGCGGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGACAACCACTT‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAATCTGTACCTGGTCACCATCAGTACGCAGTGCCACCGCCGGATGGTTACCTGCATCTACGCTATCGCCCAGCgtgt              <  2:1543573/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                     gCTTCTTGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAATCTGTACCTGGTCACCATCAGTACGCAGTGCCACCGCCGGATGGTTACCTGCATCTACGCTATCGCCCAGCGTGTTTTCGa        <  2:783291/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                         cttGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAATCTGTACCTGGTCACCATCAGTACGCAGTGCCACCGCCGGATGGTTACCTGCATCTACGCTATCGCCCAGCGTGTTTTCGATgg     >  1:1614523/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                           tGCTGAGTACGTGAGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAATCTGTACCTGGTCACCGTCAGTACGCCGTGCAACCGCCGGCTGGTTCCCTGCATCTACGCTACCCCCCAGCGTGCTTTCGCTGGTCa  >  2:1499314/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                    
ATTTCGTCGTTATCATCTACGCTGCCGGTATTACCCGCAAACGGACGATTAGAGATCACCGCATCGGCCCACGGTTTAGCCGTGTTAAAACCTT‑CGTTGATGGCGCTATCACGGATCACCACC‑TGACCGTTGGTATTGGCATCAACATCCAGGC‑TGCGGCCCAGTTGCGCCACACCATCACCGAAAGCATTGAAACGGCTGTTTACGGCGAGGAAACCGTAGTAAATGTTGGACAGCGTAGCCGGTGCAAACACATACGCTTCTTGCTGAGTACGACTGTTCACCACGCGGAATTCGGTGTTATCGAACACCACTG‑CGCCGCGACCAGAAACGATATCCACATCCCCTTCAATGTAGCTGTTGGTCACCAGCGTACGCGGCTGACGATTCGTTTCCAGACGGTTCTGCACACCGCTGTTGGTGACAAAGAAGGTGTTCTGACGACCGAGAATGTTAACGTTGTTAATCTGTACCTGGTCACCATCAGTACGCAGTGCCACCGCCGGATGGTTACCTGCATCTACGCTATCGCCCAGCGTGTTTTCGATGGTCA  >  CP042583/668926‑669478

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A