Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 672,646 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583672,6460AT97.6% 469.2 / NA 210intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (1/0);  major base T (92/112);  minor base C (4/1);  total (97/113)
Fisher's exact test for biased strand distribution p-value = 1.82e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583672,6470GC98.1% 475.6 / NA 210intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/4);  new base C (97/109);  total (97/113)
Fisher's exact test for biased strand distribution p-value = 1.26e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583672,6480CG99.0% 478.4 / NA 210intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (2/0);  new base G (95/111);  total (97/113)
Fisher's exact test for biased strand distribution p-value = 2.16e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 210 total aligned reads displayed.

CGCTACAAAACCGGGCTGGAAGCCGAGCGGTTGATGGAAGTTGAACAGGTGCTGGAGAGCGCGCGCAAAGCGAAAGCGGCAGGAAGCACGCGCTTCTGTATGGGCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCAGCCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGCCGCCGGAAAGCGTGCCAATCAACATGCTGGTGAAGGTGAAAGGCACGCCGCTTGCCGATAACGATGATGTCGATGCCTTTGATTTTATTCGCACCATTGCGGTCGCG  >  CP042583/672370‑672927
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                       
cGCTACAAAGCCGGGCTGGAAGCCGAGCGGTTGATGGAAGTTGAACAGGTGCTGGAGTCGGCGCGCAAAGCGAAAGCGGCAGGATCGACGCGCTTCTGTATGGGCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGttt                                                                                                                                                                                                                                                                                <  1:712645/288‑1 (MQ=255)
     cAAAACCGGGCTGGAAGCCGAGCGGTTGATGGAAGTTGAACAGGTGCTGGAGTCGGCGCGCAAAGCGAAAGCGGCAGGATCGACGCGCTTCTGTATGGGCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACgg                                                                                                                                                                                                                                                                           >  2:1771575/1‑288 (MQ=255)
     cAAAACCGGGCGGGAAGCCGAGCGGTTGATGGAAGTTGAACAGGTGCTGGAGTCGGCGCGCAAAGCGAAAGCGGCAGGATCGACGCGCTTCTGTATGGGCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGc                                                                                                                                                                                                                                                                          <  2:1662879/289‑1 (MQ=255)
        acacGGGCTGGAGGCAGAGCGGTGGGTGGAAGTTGAACGGGTGGTGGAGTGGGCGCGCAAAGCGAAAGCGGCAGGATCGACGCGCTTCTGTATGGGCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAat                                                                                                                                                                                                                                                                       <  2:106598/286‑1 (MQ=255)
             ggCTGGAAGCCGAGCGGTTGATGGAAGTTGAACAGGTGCTGGAGTCGGCGCGCAAAGCGAAAGCGGCAGGATCGACGCGCTTCTGTATGGGCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGCGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTGCTACAACCACAACCTGGG‑CACCCCGCCGGAGCTTTCCgggactctca                                                                                                                                                                                                                                                                   >  2:1302920/1‑280 (MQ=255)
              gCTGGAAGCCGAGCGGTTGATGGAAGTTGAACAGGTGCTGGAGTCGGCGCGCAAAGCGAAAGCGGCAGGATCGACGCGCTTCTGTATGGGCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATatcat                                                                                                                                                                                                                                                                  <  1:1579995/288‑1 (MQ=255)
                 ggAAGCCGAGCGGTTGATGGAAGTTGAACAGGTGCTGGAGTCGGCGCGCAAAGCGAAAGCGGCAGGATCGACGCGCTTCTGTATGGGCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATcacc                                                                                                                                                                                                                                                              <  1:1297501/289‑1 (MQ=255)
                    aGCCGAGCGGTTGATGGAAGTTGAACAGGTGCTGGAGTCGGCGCGCAAAGCGAAAGCGGCAGGATCGACGCGCTTCTGTATGGGCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACcaca                                                                                                                                                                                                                                                           <  1:1952962/289‑1 (MQ=255)
                       cGAGGGGTTTGTGGAAGTTGAACGGGTGCTGGGGTGGGCGCGCAAAGCGAAAGCGGCAGGATCGCGGGGGTTCTGTATGGGGGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACg                                                                                                                                                                                                                                                         <  2:1633465/288‑1 (MQ=255)
                         ggCGGTTGATGGAAGTGGAACAGGTGCTGGGGGCGGCGCGGAAAGCGAAAGCGGCAGGATGGACGCGCTTCTGTATGGGCGCGGCGTGGAAGAAGCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCa                                                                                                                                                                                                                                                       <  2:1445743/287‑1 (MQ=255)
                         ggCGGGTGGTGGAAGTTGGACAGGGGATGGAGTCGGGGCGCAAAGCGAAAGCGGCAGGACCGACGCGCTTCTGTATGGGGGGGGCGTGGGAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAGAGGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCa                                                                                                                                                                                                                                                       <  2:1865398/287‑1 (MQ=255)
                         aggcgTTGATGGAAGTTGAACAGGGGCTGGAGGCGGCGCGCAAAGCGCAAGCGGCAGGATCGACGCGCTTCTGTATGGGCGCGGCGTTGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCa                                                                                                                                                                                                                                                       <  2:823695/284‑1 (MQ=255)
                         aGCGGTTGATGGAAGTTGAACAGGTGCTGGAGTCGGCGCGCAAAGCGAAAGCGGCAGGATCGACGCGCTTCTGTATGGGCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCa                                                                                                                                                                                                                                                       <  1:1888918/288‑1 (MQ=255)
                         aGCGGTGGATGGAAGTTGAACAGGTGCTGGGGGCGGCGCGCAAAGCGAAAGCGGCAGGATCGACGCGCTTCTGTATGGGCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCa                                                                                                                                                                                                                                                       <  2:570067/288‑1 (MQ=255)
                          gCGGTTGATGGAAGTTGAACAGGTGCTGGGGTCGGCGCGCAAAGCGAAAGCGGCAGGATCGACGCGCTTCTGTATGGGCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCAc                                                                                                                                                                                                                                                      <  1:909533/288‑1 (MQ=255)
                          gCGGTTGATGGAAGTTGAACAGGTGCTGGAGTCGGCGCGCAAAGCGAAAGCGGCAGGATCGACGCGCTTCTGTATGGGCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCAc                                                                                                                                                                                                                                                      <  1:115382/288‑1 (MQ=255)
                          gCGGTTGATGGAAGTTGAACAGGTGCTGGAGTCGGCGCGCAAAGCGAAAGCGGCAGGATCGACGCGCTTCTGTATGGGCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCAc                                                                                                                                                                                                                                                      <  1:739744/288‑1 (MQ=255)
                                  tGGAAGTTGAACAGGGGAGGGAGTCGGCGCGCAAAGCGAAGGCGGCGCGAGCGACGCGCTCCTGGATGGTCTCGGCGTGGAAGAACCCCCACGCACGCGATATGCCGTACATGGAACAAATGGTGCAGGGGGTGAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGCGGACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGACCGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCACCGGAGTTGTACGGCAATATCATCACCACACGCACtttttcca                                                                                                                                                                                                                                              <  2:312584/288‑7 (MQ=255)
                                   ggAAGTTGAACAGGTGCTGGAGTCGGCGCGCAAAGCGAAAGCGGCAGGATCGACGCGCTTCTGTATGGGCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGaa                                                                                                                                                                                                                                            <  1:1347699/289‑1 (MQ=255)
                                    gAAGTTGAACAGGTGCTGGGGTCGGCGCGCAAAGCGAAAGCGGCAGGATCGACGCGCTTCTGTATGGGCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGaa                                                                                                                                                                                                                                            <  1:1697283/288‑1 (MQ=255)
                                    gAAGTGGAACAGGTGCTGGAGTCGGCGCGCAAAGCGAAAGCGGCAGGATCGACGCGCTTCTGTATGGGCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGaa                                                                                                                                                                                                                                            <  1:1108247/288‑1 (MQ=255)
                                      aGTTGAACAGGGGGTGGGGGCGGCGCGAAAAGCGAAAGCGGCAGGATCGACGCGCTTCTGTATGGGCGCGGCGTGGAAGAGTCCCCACGAACGCGATAGGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACg                                                                                                                                                                                                                                          <  2:1380885/288‑1 (MQ=255)
                                        ttGAACAGGTGCTGGAGTCGGCGCGCAAAGCGAAAGCGGCAGGATCGACGCGCTTCTGTATGGGCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTa                                                                                                                                                                                                                                                                              >  1:1833731/1‑250 (MQ=255)
                                        ttGAACAGGTGCTGGAGTCGGCGCGCAAAGCGAAAGCGGCAGGATCGACGCGCTTCTGTATGGGCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGcc                                                                                                                                                                                                                                        >  1:760524/1‑288 (MQ=255)
                                               ggTGCTGGAGTCGGCGCGCAAAGCGAAAGCGGCAGGATCGACGCGCTTCTGTATGGGCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGTCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CCCCTCGCCGGAGTTTTACGGCAATATCCTCCCCCAACGCACCTCTCAGGAACGCCTCtataa                                                                                                                                                                                                                                 >  2:1580619/1‑287 (MQ=255)
                                                gTGCTGGAGTCGGCGCGCAAAGCGAAAGCGGCAGGATCGACGCGCCTCTGTATGGGCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCCTGA‑CACATCGCCGGCGTTCTACGGCAATATCATCACCACACGCACTCATCCAGAACTCCGCGATAcc                                                                                                                                                                                                                                >  2:1132624/1‑287 (MQ=255)
                                                 tGCTGGAGTCGGCGCGCAAAGCGAAAGCGGCAGGATCGACGCGCTTCTGTATGGGCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCa                                                                                                                                                                                                                                                       <  1:1466535/264‑1 (MQ=255)
                                                          cggcgcgcAAAGCGAAAGCGGCAGGATCGACGCGCTTCTGTATGGGCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGt                                                                                                                                                                                                                     >  1:77549/3‑289 (MQ=255)
                                                           ggcgcgcAAAGCGAAAGCGGCAGGATCGACGCGCTTCTGTATGGGCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACCACAACCACAACCTGGA‑CACCCCGCCGGCGTTTTACGGCAATACCATCACCACACGCCCTTATCAGGAACCCCCCGCTCCCCCGGAAAAAGt                                                                                                                                                                                                                     >  2:1079092/2‑288 (MQ=255)
                                                                 cAAAGCGAAAGCGGCAGGATCGACGCGCTTCTGTATGGGCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCa                                                                                                                                                                                                                                                                         <  1:26406/230‑1 (MQ=255)
                                                                              gcaggatcgaCGCGCTTCTGTATGGGCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGc                                                                                                                                                                                                                                                                          <  1:1651974/207‑1 (MQ=255)
                                                                                           gcTTCTGTATGGGCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCAGACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTggcg                                                                                                                                                                                     <  1:1771575/288‑1 (MQ=255)
                                                                                            cTTCTGTATGGGCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGCACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCAGGGCACGTTGAGTGAAACTCAGGCGCAGCGCCTCGCGAACGCTGGGCTGGATTACTACAACCACAATCTGGA‑CACCCCCCCGGAGTTTCACGGCAATATCACCACCACACGCACTTACCAGGCACTCCTCGACACGCTGGAAAAACTGCGCGAACCCGGGTTAAAAGTCTGTTCTggct                                                                                                                                                                                     >  2:1834453/1‑286 (MQ=255)
                                                                                             ttCTGTATGGGCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTgg                                                                                                                                                                                       >  1:1358302/1‑284 (MQ=255)
                                                                                              tCTGTATGGGCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCAt                                                                                                                                                                                 >  1:1015822/1‑289 (MQ=255)
                                                                                                      ggCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGc                                                                                                                                                                          <  1:1302920/288‑1 (MQ=255)
                                                                                                       gcgcGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCtt                                                                                                                                                                        >  1:1741127/1‑289 (MQ=255)
                                                                                                       gcgcGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATAATCACCACACGCACTTATCAGCAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCCAAGTCTGGTCTTGCGGCATTGTGGGCtt                                                                                                                                                                        >  1:519900/1‑289 (MQ=255)
                                                                                                        cgcgGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCtt                                                                                                                                                                        <  1:1446142/288‑1 (MQ=255)
                                                                                                          cggcgTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CCCCTCGCCGGAGTTTTACGGCAATATCATCCCCACACGCACTTATCAGGACCGCCTCCATACGCAGCAAAAAGTCCGCGACGCCGGGATCCAAGTCTGTTCTGGCGGCGTTGTGGGCTTAg                                                                                                                                                                      >  2:1037037/1‑288 (MQ=255)
                                                                                                          cggcgTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAg                                                                                                                                                                      >  1:1216242/1‑288 (MQ=255)
                                                                                                          cagcgTGGAACAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGCGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGACTCGCTGAGTCAATCTCAGGCGCAGCTCCCCGCGAACGCCGGGCTTGATTACTACAACCACAACCTGGA‑CACCTCGCCGCAGTTTTACGTCAATAGCATCACCACACGCCCTTATCAGTACCGCCTCGATAGGCGGTAAAAAGTGCGCGATCCCGGGTACAAAGGCTACTCTGGCGGCTTtttgcgatgagg                                                                                                                                                                     >  2:1712207/3‑281 (MQ=255)
                                                                                                            gcgTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATACCATCACCACACGCACTTATCAGGAACGCCTCGATACGCCGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCg                                                                                                                                                                   >  2:675304/1‑289 (MQ=255)
                                                                                                                ggAAGGATCCCCCCGACCGGGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGGGATGGGGCTGGAGGCGTGTATGACGCGTGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGaaa                                                                                                                                                                <  2:776418/288‑1 (MQ=255)
                                                                                                                ggAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGaaa                                                                                                                                                                <  1:384046/288‑1 (MQ=255)
                                                                                                                       tCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCacac                                                                                                                                                                                                                                                          <  1:1832412/191‑1 (MQ=255)
                                                                                                                       tCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTaaaa                                                                                                                                                        >  1:225725/1‑289 (MQ=255)
                                                                                                                            aCGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCATTATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATCGTGGGCCTAGGCGAAAGGGTAAAAGATc                                                                                                                                                    >  2:221714/1‑288 (MQ=255)
                                                                                                                                aCGCGATAGTCCGGACCGGGAACAACTGGGGCAGGGGGGAAAAGGGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCgcgc                                                                                                                                                <  2:861128/288‑1 (MQ=255)
                                                                                                                                 cgggATATGCCGGACCTGGAACAAATGGGGCCGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCGGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCg                                                                                                                                              <  2:953572/286‑1 (MQ=255)
                                                                                                                                                  ggAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATatcatc                                                                                                                                                                                                                                                                 >  2:1833671/1‑157 (MQ=255)
                                                                                                                                                        aaTGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCg                                                                                                                                                                                                          >  2:1288476/1‑206 (MQ=255)
                                                                                                                                                        aaTGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCaaa                                                                                                                        >  1:1246099/1‑288 (MQ=255)
                                                                                                                                                         aTGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCaaa                                                                                                                        >  1:405442/1‑287 (MQ=255)
                                                                                                                                                         aTGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCGCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGCGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGACGCCGGGATCAAAGCCTGTTCTGGCGCCATTGTTGGCTTAGGCGAAACGGTAAAAGATCGCTCCGGATTCTTGATGCCACTTGCaaca                                                                                                                       >  2:1558790/1‑286 (MQ=255)
                                                                                                                                                              gCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCg                                                                                                                 >  1:1501936/1‑289 (MQ=255)
                                                                                                                                                                  ggggTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGAcg                                                                                                              >  1:328064/1‑288 (MQ=255)
                                                                                                                                                                  ggggTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGAcg                                                                                                              <  2:405442/288‑1 (MQ=255)
                                                                                                                                                                       aaaaGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGccgccg                                                                                                        >  1:460465/1‑289 (MQ=255)
                                                                                                                                                                            cGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGCCGCCGGaaa                                                                                                    >  2:1230257/1‑288 (MQ=255)
                                                                                                                                                                              aTGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAat                                                                                                                                                                                                                                                                       <  1:283153/123‑1 (MQ=255)
                                                                                                                                                                              aTGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAat                                                                                                                                                                                                                                                                       >  2:283153/1‑123 (MQ=255)
                                                                                                                                                                              aTGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGCCGCCGGAAAGCg                                                                                                 >  1:1526295/1‑289 (MQ=255)
                                                                                                                                                                              aTGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGAGCAAAGTCTGTTATGGCGGCATTATGGGCTTAGGCGAACCGGGAAAAGATCGCGCGGGATATATGCTGCAACTGTCAAACCGGCACAcgcccacacacagcg                                                                                                 >  2:253167/1‑278 (MQ=255)
                                                                                                                                                                                ggggCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGCCGCCGGAAAGCGt                                                                                                >  1:1313794/1‑288 (MQ=255)
                                                                                                                                                                                  ggCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGCCGCCGGAAAGCGTGc                                                                                              <  1:995923/288‑1 (MQ=255)
                                                                                                                                                                                     tGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGCCGCCGGAAAGCGTGCCAAt                                                                                          <  1:1867643/289‑1 (MQ=255)
                                                                                                                                                                                         ggggttgaTGACGCTGGGCACGTTGAGTGAATCTCAGGGGCAGCGCCTCGCGAACGCCGGGCTGGAGTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGCCGCCGGAAAGCGTGCCAATCaa                                                                                       <  2:1163788/281‑1 (MQ=255)
                                                                                                                                                                                           cgggtATGACGCTGGTCACGTTGAGTGAAGCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACACCCACAACCCGGA‑CACCTCGCCGGCGTTTTACGGCAATAGCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGCTGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGCCGCCGGAAAGCGTGCCAATCAAc                                                                                      <  1:1638142/284‑1 (MQ=255)
                                                                                                                                                                                             tgtATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATtg                                                                                                                                                                               <  1:1080612/196‑1 (MQ=255)
                                                                                                                                                                                             tgtATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGCCGCCGGAAAGCGTGCCAATCAACAt                                                                                    >  1:1906325/1‑287 (MQ=255)
                                                                                                                                                                                                  gACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCACCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGCCGCCGGAAAGCGTGCCAATCAACATGCTggtg                                                                             <  1:1372800/289‑1 (MQ=255)
                                                                                                                                                                                                    cGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGGGAAACGGTAAAAGATAGCGCCGGATTAGTGCTGCAACTGGCCAACCTGCCGACGCCGCCGGCAAGGGTGACAACCACCATTCCtgtgaa                                                                           >  2:1594716/1‑289 (MQ=255)
                                                                                                                                                                                                       tGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGCCGCCGGAAAGCGTGCCAATCAACATGCTggtgaaggt                                                                        >  2:715159/1‑289 (MQ=255)
                                                                                                                                                                                                         ggCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGGTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCGGACGCCGCCGGAAAGAGTGCCAATCAAAATGCTggtgaaggtga                                                                      >  2:540609/1‑289 (MQ=255)
                                                                                                                                                                                                         ggCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATcgcg                                                                                                                                                 <  1:489702/214‑1 (MQ=255)
                                                                                                                                                                                                         ggCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATcgcg                                                                                                                                                 >  2:489702/1‑214 (MQ=255)
                                                                                                                                                                                                                   gTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGCCGCCGGAAAGCGTGCCAATCAACATGCTGGTGAAGGTGAAAGGCAcgcc                                                            >  1:1603765/1‑289 (MQ=255)
                                                                                                                                                                                                                     gAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGCCGCCGGAAAGCGTGCCAATCAACATGCTGGTGAAGGTGAAAGGCAcgccgc                                                          <  1:1074862/289‑1 (MQ=255)
                                                                                                                                                                                                                        tctcAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCCTCGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGGTGCAACTGGCAAACCTGCCGACGCCACCCGAAAGCGTCCCAATCAACATGCTGGTGAAGGGGAAAGGcgacgcgc                                                          >  2:153417/1‑279 (MQ=255)
                                                                                                                                                                                                                        tctcAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGCCGCCGGAAAGCGTGCCAATCAACATGCTGGTGAAGGTGAAAGGCACGCCGCTTg                                                       <  1:142147/289‑1 (MQ=255)
                                                                                                                                                                                                                            aGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGCCGCCGGAAAGCGTGCCAATCAACATGCTGGTGCAGGTGGAAGGACCGCCGCTTGCCg                                                    >  2:136045/1‑288 (MQ=255)
                                                                                                                                                                                                                            aGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCAGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGCCGCCGGAAAGCGTGCCAATCAACATGCTGGTGAAGGTGAAAGGCACGCCGCTTGCCGa                                                   >  2:347329/1‑289 (MQ=255)
                                                                                                                                                                                                                               cgcATCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACCACCTGTA‑CCCCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTTCCGACGCCGCCGGAAAGCGTGCCAATCAACATGCTGGTGAAGGTGAAAGGCACGCCGCTTGCCGAt                                                  <  1:1121450/287‑1 (MQ=255)
                                                                                                                                                                                                                               cgcAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGCCGCCGGAAAGCGTGCCAATCAACATGCTGGTGAAGGTGAAAGGCACGCCGCTTGCCGAt                                                  <  1:1132867/287‑1 (MQ=255)
                                                                                                                                                                                                                                 cAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTgg                                                                                                                                                                                       <  1:1323908/152‑1 (MQ=255)
                                                                                                                                                                                                                                     gcCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGCCGCCGGAAAGCGTGCCAATCAACATGCTGGTGAAGGTGAAAGGCACGCCGCTTGCCGATAACga                                             <  1:1031048/286‑1 (MQ=255)
                                                                                                                                                                                                                                      ccTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGCCGCCGGAAAGCGTGCCAATCAACATGCTGGTGAAGGTGAAAGGCACGGCGCTTGCCGATAACgatgat                                         >  1:100900/1‑289 (MQ=255)
                                                                                                                                                                                                                                            gAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATGACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGCCGCCGGAAAGCGTGCCAATCAACATGCTGGTGAAGGTGAAAGGCACGCCGCTTGCCGATAACGATGATGTCGa                                    <  1:1159396/288‑1 (MQ=255)
                                                                                                                                                                                                                                            gAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGCCGCCGGAAAGCGTGCCAATCAACATGCTGGTGAAGGTGAAAGGCACGCCGCTTGCCGATAACGATGATGTCGAt                                   <  1:419363/289‑1 (MQ=255)
                                                                                                                                                                                                                                                       tagATTAATACAACCACAACCTGGA‑CACCTGGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCGTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGCCGCCGGAAAGCGTGCCAATCAACATGCTGGTGAAGGTGAAAGGCACGCCGCTTGCCGATAACGATGATGTCGATGCCTTTGAtt                         <  2:1149563/286‑1 (MQ=255)
                                                                                                                                                                                                                                                             acttaaacctaaaccTGGACCACCCG‑CCAGAGTTTTACGGCAATATCATCACCGCACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGCCGCCGGAAAGCGTGCCAATCAACATGCTGGTGAAGGTGAAAGGCACGCCGCTTGCCGATAACGATGATGTCGATGCCTTTGATTTTATTCg                  <  2:772678/278‑1 (MQ=255)
                                                                                                                                                                                                                                                              ctacAACCACAACCGGGA‑AACCTCGCCGGAGGTTTACGGCAATATCAACACCGCACGCACTGAGCAGGAAAGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCGGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGAAACTGGCAAACCTGACGACGCCGCCGGAAAGCGTGCCAATCAACATGCTGGTGAAGGTGAAAGGCACGCCGCTTGCCGATAACGATGATGTCGATGCCTTTGATTTGATTCGc                 <  2:1044491/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                   accacaaccTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGCAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGCCGCCGGAAAGCGTGCCAATCAACATGCTGGTGAAGGTGAAAGGCACGCCGCTTGCCGATACCGATGATGTCGATGCCTTTGATTTTATTCGCACCAt            >  1:1548017/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                   accacaaccTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGCCGCCGGAAAGCGTGCCAATCAACATGCTGGTGAAGGTGAAAGGCACGCCGCTTGCCGATAACGATGATGTCGATGCCTTTGATTTTATTCGCACCAt            >  2:1332552/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                    ccacaaccTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGCCGCCGGAAACCGTGCCACTCAACATGCTGGTGAAGGTGAAAGGCCCGCCGCTTGCCGCTAACGCTGATGTCCATGCCTTTGATTTTATTCGCACCAtt           >  2:1681309/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                        aaccTGGA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGCCGCCGGAAAGCGTGCCAATCAACATGCTGGTGAAGGTGAAAGGCACGCCGCTTGCCGATAACGATGATGTCGATGCCTTTGATTTTATTCGCACCATTGccg       >  1:679787/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                             ggA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGCCGCCGGAAAGCGTGCCAATCAACATGCTGGTGAAGGTGAAAGGCACGCCGCTTGCCGATAACGATGATGTCGATGCCTTTGATTTTATTCGCACCATTGCGGTcgcg  <  1:136045/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                             ggA‑CACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCAGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGCCGCCGGAAAGCGTGCCAATCAACATGCTGGTGAAGGTGAAAGGCACGCCGCTTGCCGATAACGATGATGTCGATGCCTTTGATTTTATTCGCACCATTGCGGTcgcg  <  1:347329/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                              gA‑CACCTGGCCGGGGTTTGACGGCAATAGCATCACCACACGCACTTATCAGGCACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTGCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGAGCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGCCGCCGGAAAGCGTGCCAATCAACATGCTGGTGAAGGTGAAAGGCACGCCGCTTGCCGATAACGATGATGTCGATGCCTTTGATTTTATTCGCACCATTGCGGTcgcg  <  2:1256060/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                       
CGCTACAAAACCGGGCTGGAAGCCGAGCGGTTGATGGAAGTTGAACAGGTGCTGGAGAGCGCGCGCAAAGCGAAAGCGGCAGGAAGCACGCGCTTCTGTATGGGCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGA‑CACCAGCCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGCCGCCGGAAAGCGTGCCAATCAACATGCTGGTGAAGGTGAAAGGCACGCCGCTTGCCGATAACGATGATGTCGATGCCTTTGATTTTATTCGCACCATTGCGGTCGCG  >  CP042583/672370‑672927

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A