Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 679,320 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583679,3200AT99.7% 678.4 / NA 284intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (138/145);  minor base G (0/1);  total (138/146)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583679,3210CG100.0% 678.7 / NA 284intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (138/146);  total (138/146)
*CP042583679,3220TA99.3% 673.8 / NA 284intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (137/144);  minor base C (1/1);  total (138/146)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 284 total aligned reads displayed.

TCATGCCCCTGATCGTCAATCGCCATCAGATCAACAGGATGCTCACTCATTGGAATCAAATGCGTATCCACTTTCAGCAGATTACGAATTAAATTGATGGCTTCCAGAGGCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCACTACGGCGAATACGCCCCGTGCTGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGAGCTAAGACTACTGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGGGAAACAGCAATTAACCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACG  >  CP042583/679042‑679601
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                         
 cATGCCCCTGATCGTCAATCGCCATCAGATCAACAGGATGCTCTGACATTGGAATCAAATGCGTATCCACTTTCAGCAGATTACGAATTAAATTGATGGCTTCCAGAGGCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAAt                                                                                                                                                                                                                                                                                  >  1:1880752/1‑289 (MQ=255)
           aTCGTCAATCGCCATCAGATCAACAGGATGCTCTGACATTGGAATCAAATGCGTATCCACTTTCAGCAGATTACGAATTAAATTGATGGCTTCCAGAGGCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGtc                                                                                                                                                                                                                                                                        >  1:1046291/1‑288 (MQ=255)
              gtaaaccGCCATCACATCATCAGGATGCACGGTCATTGGAATCAGATGCGTATCCACTTTCAGCACAGTACGAATTAAATTGATGGCTTGCAGGGGCCTCACGCTAAGGTGATCCAGCGCCTTTAATATCAAGTTTCCGAGATTATTACCGGAAAGTGCGCCAGTGCCACAAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGATTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCGCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCGCGtcgag                                                                                                                                                                                                                                                                     <  2:1067473/283‑5 (MQ=255)
                cAATCGCCATCAGATCAACAGGATGCTCTGACCTTGGAATCAAATGCGTATCCACTTTCAGCAGATTACGAATTAAATTGATGGCTTCCAGAGGCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCTCCATTGCCACCAAAACGGTATTCAAACATCGCGGAAGCGACCCTCGGTTCCGTTATCAGCTGGTTCAGGCAGTTGAGCATATCGCCCCAGGCACTTCCGCCTTCTGACCGGCGAAGACGCCCCGtcgagc                                                                                                                                                                                                                                                                    >  2:455280/1‑283 (MQ=255)
                cAATCGCCATCAGATCAACAGGATGCTCTGACATTGGAATCAAATGCGTATCCACTTTCAGCAGATTACGAATTAAATTGATGGCTTCCAGAGGCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGtcgagc                                                                                                                                                                                                                                                                    >  1:1013065/1‑283 (MQ=255)
                cAATCGCCATCAGATCAACAGGATGCTCTGACATTGGAATCAAATGCGTATCCACTTTCAGCAGATTACGAATTAAATTGATGGCTTCCAGAGGCCGAACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGtcgagcc                                                                                                                                                                                                                                                                   <  2:1631355/289‑7 (MQ=255)
                 aaTCGCCATCAGATCAACAGGATGCTCTGACATTGGAATCAAATGCGTATCCACTTTCAGCAGATTACGAATTAAATTGATGGCTTCCAGAGGCCGCACGCTAAGGTGATCCAGCGACTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGTTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATAGCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGtcgagcc                                                                                                                                                                                                                                                                   >  1:932254/1‑282 (MQ=255)
                        aTCAGATCAACAGGATGCTCTGACATTGGAATCAAATGCGTATCCACTTTCAGCAGATTACGAATTAAATTGATGGCTTCCAGAGGCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTa                                                                                                                                                                                                                                                            >  1:321801/1‑288 (MQ=255)
                          cAGATCAACAGGATGCTCTGACATTGGAATCAAATGCGTATCCACTTTCAGCAGATTACGAATTAAATTGATGGCTTCCAGAGGCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCg                                                                                                                                                                                                                                                         <  1:169613/289‑1 (MQ=255)
                           aGATCAACAGGATGCTCTGACATTGGAATCAAATGCGTATCCACTTTCAGCAGATTACGAATTAAATTGATGGCTTCCAGAGGCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCg                                                                                                                                                                                                                                                         <  2:635281/288‑1 (MQ=255)
                                aaagggATGCTCTGCCATAGGAATCAAATGCGTGTCCACTTTCAGCAGATAACGAATTAAATTGATGGCTTCCAGAGGCCGACAGCTAAGGGGATCCAGCTCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCGTTATCggtggtg                                                                                                                                                                                                                                                   <  2:1748577/285‑1 (MQ=255)
                                   aGGATGCTCTGACATTGAAATCAAATGCGTATCCACTTTCAGCAGATTACGAATTAAATTGATGGCTTCCAGAGGCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGgtggtggtg                                                                                                                                                                                                                                                <  1:1646854/289‑1 (MQ=255)
                                     gATGCTCTGACATTGGAATCAAATGCGTATCCACTTTCAGCAGATTACGAATTAAATTGATGGCTTCCAGAGGCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGTGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGGGAc                                                                                                                                                                                                                                              >  1:870619/1‑289 (MQ=255)
                                     gATGCTCTGACATTGGAATCAAATGCGTATCCACTTTCAGCAGATTACGAATTAAATTGATGGCTTCCAGAGGCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCgg                                                                                                                                                                                                                                                        >  2:140813/1‑279 (MQ=255)
                                     gATGCTCTGACATTGGAATCAAATGCGTATCCACTTTCAGCAGATTACGAATTAAATTGATGGCTTCCAGAGGCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCgg                                                                                                                                                                                                                                                        <  1:140813/279‑1 (MQ=255)
                                       tgctctgacaTTGGAATCAAATGCGTATCCACTTTCAGCAGATTACGAATTAAATTGATGGCTTCCAGAGGCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTACCGGTGGTGGGTACGa                                                                                                                                                                                                                                            >  2:483007/9‑289 (MQ=255)
                                         ctttgaaaTTGGAATCAAATGCGGATCCACTTTCAGCAGATTACGAATTAAATTGATGGCTTCCAGAGGCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGa                                                                                                                                                                                                                                            <  2:850068/280‑1 (MQ=255)
                                                  tGGAATCAAATGCGTATCCACTTTCAGCAGATTACGAATTAAATTGATGGCTTCCAGAGGCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTaa                                                                                                                                                                                                                                  >  1:1125588/1‑288 (MQ=255)
                                                   ggAATCAAATGCGTATCCACTTTCAGCAGATTACGAATTAAATTGATGGCTTCCAGAGGCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGt                                                                                                                                                                                                                                                                         >  2:497406/1‑248 (MQ=255)
                                                   ggAATCAAATGCGTATCCACTTTCAGCAGATTACGAATTAAATTGATGGCTTCCAGAGGCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGt                                                                                                                                                                                                                                                                         <  1:497406/248‑1 (MQ=255)
                                                      aTCAAATGCGTTTCCACTTTGAGAGGATTACGAATTAAATTGATGGCTTCCAGCAGCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACga                                                                                                                                                                                                                              <  2:1046291/288‑1 (MQ=255)
                                                          aaTGCGTATCCACTTTCAGCAGATTACGAATTAAATTGATGGCTTCCAGAGGCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCCCCATTCTCGGTGGTGGTGACGCTACCCGTCAAACTAGAAc                                                                                                                                                                                                                          >  2:1768778/1‑288 (MQ=255)
                                                              cGTATCCACTTTCAGCAGATTACGAATTAAATTGATGGCTTCCAGAGGCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCaaa                                                                                                                                                                                                                     >  1:1181578/1‑289 (MQ=255)
                                                                tATCCACTTTCAGCAGATTACGAATTAAATTGATGGCTTCCAGAGGCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCAAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCaacg                                                                                                                                                                                                                    >  1:1458969/1‑286 (MQ=255)
                                                                 aTCCACTTTCAGCAGATTACGAATTAAATTGATGGCTTCCAGAGGCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAagac                                                                                                                                                                                                                  >  1:1822944/1‑288 (MQ=255)
                                                                 aTCCACTTTCAGCAGATTACGAATTAAATTGATGGCTTCCAGAGGCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAaga                                                                                                                                                                                                                   <  1:399690/288‑1 (MQ=255)
                                                                 aTCCACTTTCAGCAGATTACGAAGTAAATTGATGGCTTCCAGAGGCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAaga                                                                                                                                                                                                                   <  1:844942/288‑1 (MQ=255)
                                                                        ttCAGCAGATTACGAATTAAATTGATGGCTTCCAGAGGCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGccacc                                                                                                                                                                                                                                                                >  2:758003/1‑236 (MQ=255)
                                                                             cagATTACGAATTAAATTGATGGCTTCCAGAGGCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCAGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATAc                                                                                                                                                                                                                                                                                >  2:1492452/1‑215 (MQ=255)
                                                                                           aaTTGATGGCTTCCAGAGGCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAg                                                                                                                                                                                      >  1:1538701/1‑289 (MQ=255)
                                                                                           aaTTGATGGCTTCCAGAGGCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGCGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAg                                                                                                                                                                                      >  2:42877/1‑289 (MQ=255)
                                                                                                 tGGCTTCCAGAGGCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCAt                                                                                                                                                                                 <  1:1755467/288‑1 (MQ=255)
                                                                                                    cTTCCAGAGGCCGGACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGcc                                                                                                                                                                              <  2:299348/288‑1 (MQ=255)
                                                                                                            ggCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTACCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTccgccg                                                                                                                                                                      <  1:895564/288‑1 (MQ=255)
                                                                                                              ccGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCgag                                                                                                                                                                    <  1:703326/288‑1 (MQ=255)
                                                                                                               cGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACGAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCgaga                                                                                                                                                                   >  1:1783110/1‑288 (MQ=255)
                                                                                                               cGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGACTACGCCCCGTCGAGCCACCATTATCGGTGTTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGCGATGAGCG‑‑AACGCGTCCCAGTCCATGACCTCCGCCgagcg                                                                                                                                                                  >  2:1730677/1‑287 (MQ=255)
                                                                                                               cGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCgaga                                                                                                                                                                   >  1:1363328/1‑288 (MQ=255)
                                                                                                               cGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCgaga                                                                                                                                                                   >  1:1237379/1‑288 (MQ=255)
                                                                                                               cGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAAAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCcaga                                                                                                                                                                   >  1:1728222/1‑288 (MQ=255)
                                                                                                               cGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGGTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCgaga                                                                                                                                                                   >  2:1153677/1‑288 (MQ=255)
                                                                                                                  aCGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGt                                                                                                                                                                                                                                                                         >  1:255303/1‑185 (MQ=255)
                                                                                                                  aCGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGt                                                                                                                                                                                                                                                                         <  2:255303/185‑1 (MQ=255)
                                                                                                                      tAAGGTAATCCAGGGCCTTTAACTACAAGTTTCCGAGATTATGCCCTGAATGTTCGCCATTGCGACCAAAACGGTATTCAAACATCGCGGAGGGTACGCTGGGTTCCGTTATCAGCTGGGTAAGGAAGTTGCGGATATCGCCCCAGAAAATGCCGCCTTCTGAACGGCGAATACGCCCCGGCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCGAAAGACGAAAGGGATGAGAG‑‑AACGCTTCCCAGTACATGCCCTCCGCCGAGAGCAACGac                                                                                                                                                           <  2:183595/289‑1 (MQ=255)
                                                                                                                       aaGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGaca                                                                                                                                                          <  1:1188157/289‑1 (MQ=255)
                                                                                                                            gttCCAGTGCCTTTAACATCAGGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGAt                                                                                                                                                      <  2:1363328/286‑1 (MQ=255)
                                                                                                                            gATCCGGCGCCTTTAACATAAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAACCATCGCGGAGGCGAGGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGAt                                                                                                                                                      <  2:818330/288‑1 (MQ=255)
                                                                                                                              tCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGa                                                                                                                                                                                                                                            >  1:500615/1‑202 (MQ=255)
                                                                                                                              tCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCaa                                                                                                                                                   >  2:1183428/1‑289 (MQ=255)
                                                                                                                              tCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCaa                                                                                                                                                   >  1:545653/1‑289 (MQ=255)
                                                                                                                              tCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCaa                                                                                                                                                   >  2:1577185/1‑289 (MQ=255)
                                                                                                                              tCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGCCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGTCGATACCCGTTAAACGACAACCCAAACCCGAAAGTGATGAGAG‑‑AACGCGTCCCCGTCCATGCCCCTCGCAGAGAGCAACGCCACgctaaa                                                                                                                                                   >  2:951100/1‑284 (MQ=255)
                                                                                                                               ccAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAg                                                                                                                                                  <  2:1877033/289‑1 (MQ=255)
                                                                                                                               ccAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCCCCCCCGAAAGCAACGACACGACCAAg                                                                                                                                                  >  2:1777504/1‑289 (MQ=255)
                                                                                                                                cAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGa                                                                                                                                                 <  1:1591368/289‑1 (MQ=255)
                                                                                                                                  gcgcCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGcc                                                                                                                                                                              >  1:1311523/1‑258 (MQ=255)
                                                                                                                                  gcgcCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATc                                                                                                                                               >  2:424443/1‑289 (MQ=255)
                                                                                                                                       tttAACATCAATGTTCCGAGGTTATGACCGGAAAGGTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATcagcca                                                                                                                                          <  2:566863/289‑1 (MQ=255)
                                                                                                                                        ttAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATcagcca                                                                                                                                          >  1:959704/1‑288 (MQ=255)
                                                                                                                                        ttAACATCAAGTTTCAGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGA‑CGAA‑AGTGATGAGCTAACGCGTCCCCGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATcagcca                                                                                                                                          >  1:1265348/1‑288 (MQ=255)
                                                                                                                                                aaGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCAGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGAt                                                                                                                                 >  1:989822/1‑289 (MQ=255)
                                                                                                                                                        gagaTTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCata                                                                                                                         <  1:904992/289‑1 (MQ=255)
                                                                                                                                                        gagaTTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCata                                                                                                                         <  1:294610/289‑1 (MQ=255)
                                                                                                                                                                  ccGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTg                                                                                                               <  1:1900278/289‑1 (MQ=255)
                                                                                                                                                                     gAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGtcgagc                                                                                                                                                                                                                                                                    >  2:1813590/1‑134 (MQ=255)
                                                                                                                                                                     gAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGGG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATcagc                                                                                                                                            >  2:1257001/1‑257 (MQ=255)
                                                                                                                                                                      aaaGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCAACTAGTCTCCTGGAg                                                                                                            >  2:167609/1‑288 (MQ=255)
                                                                                                                                                                           tCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGAACAAGATAAGCCAGCGTACTATTGCGCATATAGTTTCCTGGAGTCAGAt                                                                                                      >  1:301847/1‑289 (MQ=255)
                                                                                                                                                                               cATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATc                                                                                                  <  1:1155503/289‑1 (MQ=255)
                                                                                                                                                                               cATTGCAACCAAAACGGTATTGAACAATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATc                                                                                                  <  2:1538701/289‑1 (MQ=255)
                                                                                                                                                                                 ttGCCCCAAAAACGGTATTCAAACAGCGGGGCGGCGGCGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCcg                                                                                                <  2:904854/289‑1 (MQ=255)
                                                                                                                                                                                 ttGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCcg                                                                                                <  2:321801/289‑1 (MQ=255)
                                                                                                                                                                                      accaAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTa                                                                                           <  2:325529/289‑1 (MQ=255)
                                                                                                                                                                                           aaCGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGCCAGATTAACCGCGCCACAGTa                                                                                      >  2:1428814/1‑289 (MQ=255)
                                                                                                                                                                                                           cgcgGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGGGa                                                                      <  1:1092132/289‑1 (MQ=255)
                                                                                                                                                                                                              ggAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGGGaaa                                                                    <  1:776661/288‑1 (MQ=255)
                                                                                                                                                                                                               gAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGGGAAAc                                                                   <  1:365709/288‑1 (MQ=255)
                                                                                                                                                                                                               gAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGGGAAAc                                                                   <  1:802712/288‑1 (MQ=255)
                                                                                                                                                                                                                     aCGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAACTTGCGGGGAAACCGCAAtt                                                            >  1:628645/1‑289 (MQ=255)
                                                                                                                                                                                                                       ggccGGTTCCGTTACCGGCGGGTTGAGGCGATTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCACGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGGAAAACAGCAATTaa                                                          <  2:502957/286‑1 (MQ=255)
                                                                                                                                                                                                                            gTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACAAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGGGAAACAGCAATTAACCTg                                                      >  1:589871/1‑288 (MQ=255)
                                                                                                                                                                                                                               taaagggaccggggTTGAGGCAGTTCCCCATATCCCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCTTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGGGAAACAGCAATTAACCTGCCa                                                   <  2:682031/276‑1 (MQ=255)
                                                                                                                                                                                                                                     tCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGGGAAACAGCAATTAACCTGCCAATATTGa                                            >  2:354117/1‑289 (MQ=255)
                                                                                                                                                                                                                                         cTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGAGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGGGAAACAGCAATTAACCTGCCAATATTGAGGAt                                        >  1:734262/1‑289 (MQ=255)
                                                                                                                                                                                                                                         cTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCACCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGGGATGAGAG‑‑AACGCGTCCCAGTCCATGCGCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTAAGATGATCCGCGCCACAGTAGCGCAAATTGCGGGGAAACAGCAATTAACCTGCCAATATTAAGGAt                                        >  1:342247/1‑289 (MQ=255)
                                                                                                                                                                                                                                            gTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGGGAAACAGCAATTAACCTGCCAATATTGAGGATACa                                     >  1:1744007/1‑289 (MQ=255)
                                                                                                                                                                                                                                              tggggCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCt                                                                                                                <  2:371616/209‑1 (MQ=255)
                                                                                                                                                                                                                                                      ttGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGGGAAACAGCAATTAACCTGCCAATATTGAGGa                                         >  1:682031/1‑275 (MQ=255)
                                                                                                                                                                                                                                                          gcATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGGGAAACAGCAATTAACCTGCCAATATTGAGGATACAAACTATTTtcttct                       <  1:1426697/289‑1 (MQ=255)
                                                                                                                                                                                                                                                            atatCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACTCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGGGAAACAGCAATTAACCTGCCAATATTGAGGATACAAACTATTTTCTTCTAc                     <  2:715520/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                   cccAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGGGaaa                                                                    <  2:1644439/235‑1 (MQ=255)
                                                                                                                                                                                                                                                                       ggCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGGGAAACAGCAATTAACCTGCCAATATTGAg                                           <  1:1862027/256‑1 (MQ=255)
                                                                                                                                                                                                                                                                         cAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGGGAAACAGCAATTAACCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGa           <  1:1669595/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                           aTGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGGGAAACAGCAATTAACCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATg      <  2:1708965/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                            tGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATcagc                                                                                                                                            <  2:1298277/154‑1 (MQ=255)
                                                                                                                                                                                                                                                                            tGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGGGAAACAGCAATTAACCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGc     >  1:212184/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                             gccgccTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGGGAAACAGCAATTAACCTGc                                                     >  1:133137/1‑240 (MQ=255)
                                                                                                                                                                                                                                                                             gccgccTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGGGAAACAGCAATTAACCTGc                                                     <  2:133137/240‑1 (MQ=255)
                                                                                                                                                                                                                                                                             gccgccTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGGGAAACAGCAATTAACCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGc     >  2:1483383/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                               cgccTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGCGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGGGAAACAGCAATTAACCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACg  <  1:1632657/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                         
TCATGCCCCTGATCGTCAATCGCCATCAGATCAACAGGATGCTCACTCATTGGAATCAAATGCGTATCCACTTTCAGCAGATTACGAATTAAATTGATGGCTTCCAGAGGCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCACTACGGCGAATACGCCCCGTGCTGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGAGCTAAGACTACTGAG‑‑AACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAACGACACGATCAAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGGGAAACAGCAATTAACCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACG  >  CP042583/679042‑679601

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A