Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F210 I1 R1
|
4929 |
268.4 |
3907572 |
96.3% |
3762991 |
273.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
681,857 |
3 bp→TCG |
intergenic (–/–) |
– / – |
–/– |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 681,857 | 0 | A | T | 98.8%
| 578.7
/ NA
| 251 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (1/0); major base T (153/93); minor base G (3/0); total (158/93) |
| Fisher's exact test for biased strand distribution p-value = 2.95e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 681,858 | 0 | G | C | 99.2%
| 584.6
/ NA
| 251 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (2/0); new base C (156/93); total (158/93) |
| Fisher's exact test for biased strand distribution p-value = 5.32e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 681,859 | 0 | C | G | 99.6%
| 592.1
/ NA
| 251 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base G (157/93); total (158/93) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 252 total aligned reads displayed.
TGCGCGTATTGCCGGTATTCAGGCGGCAAAACGCACCTGGGATCTGATCCCGCTCTGTCATCCGCTGATGCTCAGCAAAGTTGAAGTCAATTTACAGGCCGAGCCGGAGCACAATCGGGTGCGTATAGAAACCTTATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGAGCGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTCAACCAGACGCTGGTGAGTTTTGACCATCCGCTGACTGACGGCGACGAAGTAGCTTTCTTCCCGCCGGTAACCGGAGGTTAAG > CP042583/681574‑682128
|||
aTTGCCGGTATTCAGGCGGCAAAACGCACCTGGGATCTGATCCCGCTCTGTCATCCGCTGATGCTCAGCAAAGTTGAAGTCAATTTACAGGCCGAGCCGGAGCACAATCGGGTGCGTATAGAAACCTTATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGACGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCCTTTATGACATGTGCAAAGCGGTGCAACAAGCGCTGGGGATTGTTCCGGTAAGTTTGCTGGCGAAGAGCGGCGGCCAGTCGGGTGAcatga > 2:1337815/1‑285 (MQ=255)
aTTGCACGTATTCAGGCGACACAACGCACCTAGGATCTGATCCCCCTCTGTCATCCCCTGATGCTCCGCAAAGTTGAAGTCAATTTACAGGCCGAGCCGGAGCACAATCGGGTGCGTATAGAAACCTTATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTa < 1:732923/289‑1 (MQ=255)
tATTCAGGCGGCAAAACGCACCTGGGATCTGATCCCGCTCTGTCATCCGCTGATGCTCAGCAAAGTTGAAGTCAATTTACAGGCCGAGCCGGAGCACAATCGGGTGCGTATAGAAACCTTATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGa < 1:343205/288‑1 (MQ=255)
gccggcACAACGCACCTGGGATCTGATCCCGCTCTGTCATCCGCTGACGCTCAGCAAAGTTGAAGTCCACTTACAGGCCGCGACGGAGCACAACCGGGCGCGTCTAGCAACCTTATGCCGCCTGACCGGGACAACCGGTGTCGCAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCCGACCCTTTATGACATGTGCAAAGCGGTGCACAAAGACATGGTGCTTTGTACGGTACGTTTGGTTGCGCAGAGCGGCGGCCAGGCGGGTGGCGTTACGGCGGAGGGGgat > 2:1753290/3‑289 (MQ=255)
gcAAAACGCACCTGGGATCTGATCCCGCTCTGTCATCCGCTGATGCTCAGCAAAGTTGAAGTCAATTTACAGGCCGAGCCGGAGCACAATCGGGTGCGTATAGAAACCTTATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGAtt > 2:807701/1‑289 (MQ=255)
cTGGGATCTGATCCCGCTCTGTCATCCGCTGATGCTCAGCAAAGTTGAAGTCAATTTACAGGCCGAGCCGGAGCACAATCGGGTGCGTATAGAAACCTTATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCtttt < 1:1110447/289‑1 (MQ=255)
ccGCTCTGTCATCCGCTGATGCTCAGCAAAGTTGAAGTCAATTTACAGGCCGAGCCGGAGCACAATCGGGTGCGTATAGAAACCTTATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGt > 1:1624503/1‑288 (MQ=255)
gCTCTGTCATCCGCTGATGCTCAGCAAAGTTGAAGTCAATTTACAGGCCGAGCCGGAGCACAATCGGGTGCGTATAGAAACCTTATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACttt > 2:869364/1‑244 (MQ=255)
gCTCTGTCATCCGCTGATGCTCAGCAAAGTTGAAGTCAATTTACAGGCCGAGCCGGAGCACAATCGGGTGCGTATAGAAACCTTATGCCGCCTGACCGGGAAAACCGGTGTCGAAATAGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTgcg < 2:222129/289‑1 (MQ=255)
ctGTCGTCGGCTGATGCTCGGCAAAGTTGAAGTCAATGTACGGGCCGAGCCGGAGCACAATCGGGGGCGTATAGAAACCTTATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGACTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGGGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGa < 2:1874626/289‑1 (MQ=255)
tGTCATCCGCTGATGCTCAGCAAAGTTGAAGTCAATTTACAGGCCGAGCCGGAGCACAATCGGGTGCGTATAGAAACCTTATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAg < 2:850058/289‑1 (MQ=255)
tGTCATCCGCTGATGCTCAGCAAAGTTGAAGTCAATTGACAGGCCGAGCCGGAGCACAATCGGGTGCGTATAGAAACCTTATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAg < 1:97150/289‑1 (MQ=255)
tCCGCTGATGCTCAGCAAAGTTGAAGTCAATTTACAGGCCGAGCCGGAGCACAATCGGGTGCGTATAGAAACCTTATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTtggt < 1:405196/289‑1 (MQ=255)
cGCTGATGCTCAGCAAAGTTGAAGTCAATTTACAGGCCGAGCCGGAGCACAATCGGGTGCGTATAGAAACCTTATGCCGCCTGAACGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCATAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGACGCGGATGATTAAAGTTCTTGTTTTCGCCCAGGTGCGCGAGTtggtgg > 1:1835613/1‑289 (MQ=255)
aTGCTCAGCAAAGTTGAAGTCAATTTACAGGCCGAGCCGGAGCACAATCGGGTGCGTATAGAAACCTTATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGGCGGGTGACTTGAAGGTGGAAGCGGATGAGTAAAGTTCTTTTTTTCGCCCAGGTTCCCGAGTTGTTGGGAACa > 2:1580398/1‑289 (MQ=255)
cAGCAAAGTTGAAGTCAATTTACAGGCCGAGCCGGAGCACAATCGGGTGCGTATAGAAACCTTATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGc > 1:282795/1‑289 (MQ=255)
aaaGTTGAAGTCAATTTACAGGCCGAGCCGGAGCACAATCGGGTGCGTATAGAAACCTTATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCa < 1:771742/286‑1 (MQ=255)
tGAAGTCAATTTACAGGCCGAGCCGGAGCACAATCGGGTGCGTATAGAAACCTTATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGaa < 2:143937/287‑1 (MQ=255)
tGAAGTCAATTTACAGGCCGAGCCGGAGCACAATCGGGTGCGTATAGAAACCTTATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGaa < 2:452185/287‑1 (MQ=255)
gcGAGCCGGAGCAGAATCGGGTGAGGATAGGAACCTTATGCCGCCTGACCGGGAAAACCGGTGGCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTccc < 2:956855/286‑1 (MQ=255)
gAGCCGGAGCACAATCGGGTGCGTATAGAAACCTTATGCCGCCTGACCGGGAAAACCGGTGTCGACATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTTCAAAGCTGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGATGAAGCGGCTGATAAAAGTTCTTTTTTTCGCACATGTACGCGAGTTGGGGGGAACAGATGCAA‑CCGAAGTGGCTGCGGGTTTccaa > 2:1429747/1‑284 (MQ=255)
ggAGCACAATCGGGTGCGTATAGAACCGTGTGGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGa < 2:539694/289‑1 (MQ=255)
ggAGCACAATAGGGTGCGGATAGAAACCTTATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGa < 1:43214/289‑1 (MQ=255)
acaATCGGGTGCGGATAGAAACCTTATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGACTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGt < 2:179630/289‑1 (MQ=255)
acaATCGGGGTCGTATAGAAACCTTATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGt < 2:735245/289‑1 (MQ=255)
cGGGTGCGTATAGAAACCTTATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGc < 1:376253/289‑1 (MQ=255)
cGGGTGCGTATAGAAACCTTATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGc < 1:1040271/289‑1 (MQ=255)
ataGAAACCTTATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGGGGGAACAGATGCAA‑CCGAAGTGGCTGCGGAGTTACCAACTGTTGAAGCGGTACGCCAGCCCATg > 1:151131/1‑289 (MQ=255)
taGAAACCTTATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATgg < 1:495401/289‑1 (MQ=255)
aaaCCTTATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCt > 1:750589/1‑288 (MQ=255)
ccTTATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTgcgc < 1:385835/289‑1 (MQ=255)
ccTTATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTgcgc < 2:1485032/289‑1 (MQ=255)
ccTTATGCCGCCTGACCGGGAAAACCGGTGTCGAAAT‑GAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCa > 1:464085/1‑289 (MQ=255)
ttATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCag < 1:807701/289‑1 (MQ=255)
ttATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCag > 1:1149782/1‑289 (MQ=255)
ttATGCCACCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGCCATGTGCAAAGCGGTGCAAAAAGACATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGTGCGGCGGCAATTCGGGGGACTTTAAGGGGGAAGCGGTGGATTAACGTTCTTTTTTTCGCCCGGGCGCGCGACTTGGGGGGAACAGAGGGGA‑CCGAAGTGTCCGCGGATTTCCCAACGGTTGAACCGTTACGTCAGCCGATGGCTgcgccg > 2:832565/1‑287 (MQ=255)
tATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGa < 2:1664428/245‑1 (MQ=255)
tATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGa > 1:1664428/1‑245 (MQ=255)
tATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATgg > 1:825171/1‑280 (MQ=255)
tATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCaga > 1:1359748/1‑289 (MQ=255)
aTGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCagag < 1:1948006/289‑1 (MQ=255)
aTGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCagag < 1:552894/289‑1 (MQ=255)
aTGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCagag < 2:785591/289‑1 (MQ=255)
aTGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGCTGACTGTAAGGTGTAAGCGGATGATTAAAGTTCTGTTTTTCGCCGATGTGCGCGAGTTGGTGGGACCAGATGGAA‑CCGATGTGGCTGCGGCTCTCCCAACCGTTGAACCGTTACGCGAGCACATGGCTGCCCagg > 2:1523410/1‑287 (MQ=255)
ccTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGACGCGGATTTTCCAACTGTTGGAGCGTTACGCCAGCACATGGTGGCGCAGAGCggac > 1:1748719/1‑285 (MQ=255)
cTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCg > 1:123472/1‑235 (MQ=255)
cTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCg < 2:123472/235‑1 (MQ=255)
cTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGGTTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGTTGTCCAGagcgagcg > 2:552894/1‑288 (MQ=255)
aaaaCCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCCGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGggcgct < 1:1004129/288‑1 (MQ=255)
cGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACAGGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGa < 1:1429747/289‑1 (MQ=255)
aaTGGAAGCATTAACCGCGGCTGCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATgg < 1:1810504/289‑1 (MQ=255)
aGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAAtt > 1:1177138/1‑289 (MQ=255)
aGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCCGCTCAGAGCGATCTCTGGCCGCTGGCCCTGGCAGATGGCAAAtt > 2:1615515/1‑289 (MQ=255)
tAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTgg < 2:583897/289‑1 (MQ=255)
ggCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGAGTTCCCAACTGTTTAAGCGTTACGCCAGCAAATGGCGGCGCAGAGCGATCGCTGGGCCGCGGCTCGTGAAGGCTGCACATTACTGGccgccg > 2:1195553/1‑288 (MQ=255)
gCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCGACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTc > 1:889840/1‑289 (MQ=255)
gCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGCGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGt > 2:1720878/1‑288 (MQ=255)
gCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACAGGGCTGCGCAGAGGGATCGCTGGCCGCTGGCGCTGGAAGATGGCAAATTACTGGTCGCCGt > 2:407440/1‑288 (MQ=255)
cgcTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGTGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTTCGGATTTCCCACCTGTTGAAGCGTTAATCCAGACCATTGCTGCGCACAGCGATCGCTGGGCGCTGGCGCTGGAAGCGGGCAAATGACTGGCTGCGGCCAACCAGAGACTgg > 2:1849315/1‑289 (MQ=255)
gcgtgccATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTCAACCAGACGCTGGt < 2:313127/284‑1 (MQ=255)
cTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTCAACCAGACGCTGGTg > 1:1622226/1‑289 (MQ=255)
aTGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGACCGCTGGGCGCTGGCCCGGGAGGATGGCAAATTACTGGCCGCCGGCAACCAGCCGCTgggtaggttttgca > 2:1733417/1‑277 (MQ=255)
cATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTCAACCAGACGCTGGTGAGTTTTGACCATc < 1:1765284/288‑1 (MQ=255)
aTGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTCAACCAGACGCTGGTGAGTTTTGACCATCCg < 1:1229039/289‑1 (MQ=255)
aTGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGAGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTCAACCAGACGCTGGTGAGTTTTGACCATCCg < 1:571882/289‑1 (MQ=255)
gtgCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTccc > 1:1304767/1‑169 (MQ=255)
gtgCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTccc < 2:1304767/169‑1 (MQ=255)
gtgCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTCAACCAGACGCTGGTGAGTTTTGACCATcc > 1:1192898/1‑286 (MQ=255)
tgCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCCAAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTAATGGCTGCCGGCAACCAGACGCTGGTGTGTTTTGACCATCCgtt > 2:1596557/1‑286 (MQ=255)
tgCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTCAACCAGACGCTGGTGAGTTTTGACCATCCGctg > 2:1124170/1‑289 (MQ=255)
tgCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCGGGAAGATGGCAAATTACTGGCTGCCGTCAACCAGACCCTGGTGAGTCTTGACCATCCGcgg > 2:274318/1‑287 (MQ=255)
cGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTCAACCAGACGCTGGTGAGTTTTGACCATCCGCtgactgac < 2:360175/288‑1 (MQ=255)
tGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTg < 2:249610/166‑1 (MQ=255)
tGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAGGATGGCAAATTACTGGCTGCCGTCAACCAGACGCTGGTGAGTTTTGACCATCCGCTGACTGACGGcg > 1:705027/1‑289 (MQ=255)
tGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTCAACCAGACGCTGGTGAGTTTTGAc > 1:1075846/1‑270 (MQ=255)
tGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTCAACCAGACGCTGGTGAGTTTTGAc < 2:1075846/270‑1 (MQ=255)
tGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTCAACCAGACGCTGGTGAGTTTTGACCATCCGCTGACTTACGGcg > 1:26184/1‑289 (MQ=255)
tGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTCAACCAGACGCTGGTGAGTTTTGACCATCCGCTGACTGACGGcg > 2:1378613/1‑289 (MQ=255)
tGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTCAACCAGACGCTGGTGAGTTTTGACCATCCGCTGACTGACGGcg > 1:1856197/1‑289 (MQ=255)
tGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATAGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTCAACCAGACGCTGGTGAGTTTTGACCATCCGCTGACTGACGGcg > 1:1888991/1‑289 (MQ=255)
tGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGAGGATTTCCCAACTGTTGAAGCGTTACGc < 2:378462/177‑1 (MQ=255)
tGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTAGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTCAACCAGACGCTGGTGAGTTTTGACCATCCGCTGACTGACGGcg > 1:1087156/1‑289 (MQ=255)
tGCAAAAAGATATGGTGATTGGTCAGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCAGATGATTAAAGTTC‑TTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTCAACCAGACGCTGGTGAGTTTTGAc < 1:1346835/269‑1 (MQ=255)
tGCAAAAAGATATGGTGATTGGTCAGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCAGATGATTAAAGTTC‑TTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTCAACCAGACGCTGGTGAGTTTTGAc > 2:1346835/1‑269 (MQ=255)
aaGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTCAACCAGACGCTGGTGAGTTTTGACCATCCGCTGACTGACGGCGACGAAg < 1:987389/289‑1 (MQ=255)
aaGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTCAACCAGACGCTGGTGAGTTTTGACCATCCGCTGACTGACGGCGACGAAg < 2:1133166/289‑1 (MQ=255)
tatGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTCAACCAGACGCTGGTGAGTTTTGACCATCCGCTGACTGACGGCGACGAAGTAGc < 1:1580398/289‑1 (MQ=255)
tGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGccc < 1:840609/91‑1 (MQ=255)
tGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTCAACCAGACGCTGGTGAGTTTTGACCATCCGCTGCCTGACGGCCACGAAGTAGCCTTCTTcc > 2:1052150/1‑288 (MQ=255)
gTCCGGGACGTTTGCTGGGGAAGAGCGGGGGCAAGTCGGGTGACTTTAAGGTGGAGGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTCAACCAGACGCTGGTGAGTTTTGACCATCCGCTGACTGACGGCGACGAAGTAGCTTTCTTCccg < 2:572775/288‑1 (MQ=255)
ccGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCAGTCAACCAGACGCTGGTGAGTTTTGACCATCCGCTGACTGACGGCGACGAAGTAGCTTTCTTCccgccg < 2:1766345/289‑1 (MQ=255)
cGGTACGTTTGCTGGTGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGAGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGATGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGACAACCAGACGCTGGTGAGTTTTGACCATACGCTGAATGACGGCGACGAAGTAGCTTTCTTCCCGCCgg > 1:1786560/1‑289 (MQ=255)
cGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTCAACCAGACGCTGGTGAGTTTTGACCATCCGCTGACTGACGGCGACGAAGTAGCTTTCTTCCCGCCgg > 1:916603/1‑289 (MQ=255)
aCGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTCAACCAGACGCTGGTGAGTTTTGACCATCCGCTGACTGACGGCGACGAAGTAGCTTTCTTCCCGCCGGTAAc < 2:475520/289‑1 (MQ=255)
cGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTCAGGCGGCAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGCTGGCACATTACTGGCTGCCGTCACCCACCAGCCGCTGAGTGTTGACCATCCTCTGACTGACGGCCACGAAGTAGCTCTCTTCCCGCCCGTaca > 2:12827/1‑286 (MQ=255)
tttGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTCCACCAGACGCGGGTGAGTTTTGACCATCCGCTCACTGACGGCGACGAAGTGGCTTTCTTCCGCCCGGTACCCgg > 2:1365068/1‑289 (MQ=255)
ttGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAACCCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTCAACCAGACGCTGGt > 1:1688542/1‑229 (MQ=255)
ttGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTCAACCAGACGCTGGTGAGTTTTGACCATCCGCTGACTGACGGCGACGAAGTAGCTTTCTTCCCGCCGGTAACCGGa > 1:422347/1‑289 (MQ=255)
ttGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTCAACCAGACGCTGGTGAGTTTTGACCATCCGCTGACTGACGGCGACGAAGTAGCTTTCTTCCCGCCGGTAACCGGa > 2:399436/1‑289 (MQ=255)
tGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGATCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTCAACCAGACGCTGGTGAGTTTTGACCATCCGCTGACTGACGGCGACGAAGTAGCTTTCTCCCCGCCGGTAACCGGAGGtt > 1:220864/1‑289 (MQ=255)
|||
TGCGCGTATTGCCGGTATTCAGGCGGCAAAACGCACCTGGGATCTGATCCCGCTCTGTCATCCGCTGATGCTCAGCAAAGTTGAAGTCAATTTACAGGCCGAGCCGGAGCACAATCGGGTGCGTATAGAAACCTTATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGAGCGGTGACTTTAAGGTGGAAGCGGATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAA‑CCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTCAACCAGACGCTGGTGAGTTTTGACCATCCGCTGACTGACGGCGACGAAGTAGCTTTCTTCCCGCCGGTAACCGGAGGTTAAG > CP042583/681574‑682128
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A