Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 692,003 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583692,0030GC99.3% 676.3 / NA 290intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (2/0);  new base C (137/151);  total (139/151)
Fisher's exact test for biased strand distribution p-value = 2.29e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583692,0040CG99.0% 673.1 / NA 290intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (3/0);  new base G (136/150);  total (139/151)
Fisher's exact test for biased strand distribution p-value = 1.10e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583692,0050TA99.3% 677.9 / NA 290intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (138/149);  minor base C (0/2);  total (139/151)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 293 total aligned reads displayed.

CACCGTCCGGCCCCACCAACCCCGTCACATAACCGGCGTGAATGGTACAATCGAGCGGCGCGACGGCGGGCTTGTCCATGCCCGGAAAGCGTTTTTCCAGGCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGGCTAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGACTAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTACTGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGC  >  CP042583/691725‑692275
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                              
cACCGTCCGGCCCCACCAACCCCGTCACATAACCGGCGTGAATGGTACAATCGAGCGGCGCGACGGCGGGCTTGTCCATGCCCGGAAAGCGTTTTTCCAGGCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGcgaaacgaaa                                                                                                                                                                                                                                                                         >  1:100436/1‑288 (MQ=255)
cACCGTCCGGCCCCACCAACCCCGTCACATAACCGGCGTGAATGGTACAATCGAGCGGCGCGACGGCGGGCTTGTCCATGCCCGGAAAGCGTTTTTCCAGGCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGcgaaacgaaa                                                                                                                                                                                                                                                                         >  1:516368/1‑288 (MQ=255)
 aCCGTCCGGCCGCACCAACCCCGTCACATAACCGGCGTGAATGGTACAATCGAGCGGCGCGACGGCGGGCTTGTCCATGCCCGGAAAGCGTTTTTCCAGGCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAAcc                                                                                                                                                                                                                                                                       >  1:1158329/1‑289 (MQ=255)
     tCCGGCCCCACCAACCCCGTCACATAACCGGCGTGAATGGTACAATCGAGCGGCGCGACGGCGGGCTTGTCCATGCCCGGAAAGCGTTTTTCCAGGCCGTTCAGCGTGCTAACGGCCTCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGCAGTCGGTCACCACAATACGCAGGCGATAGACGAGTCCGGTACCCCAATCCGGCGCTTCGCCGGTTTTCGGGGTATATTCAGCAGTCGGCCAACCGAAAcaca                                                                                                                                                                                                                                                                     >  2:1015826/1‑284 (MQ=255)
     tCCGGCCCCACCAACCCCGTCACATAACCGGCGTGAATGGTACAATCGAGCGGCGCGACGGCGGGCTTGTCCATGCCCGGAAAGCGTTTTTCCAGGCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCaa                                                                                                                                                                                                                                                                     >  1:430657/1‑287 (MQ=255)
     tCCGGCCCCACCAACCCCGTCACATAACCGGCGTGAATGGTACAATCGAGCGGCGCGACGGCGGGCTTGTCCATGCCCGGAAAGCGTTTTTCCAGGCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCaa                                                                                                                                                                                                                                                                     >  1:387139/1‑287 (MQ=255)
     tCCGGCCCCACCAACCCCGTCACATAACCGGCGTGAATGGTACAATCGAGCGGCGCGACGGCGGGCTTGTCCATGCCCGGAAAGCGTTTTTCCAGGCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCaa                                                                                                                                                                                                                                                                     >  1:265959/1‑287 (MQ=255)
     tCCGGCCCCACCAACCCCGTCACATAACCGGCGTGAATGGTACAATCGAGCGGCGCGACGGCGGGCTTGTCCATGCCCGGAAAGCGTTTTTCCAGGCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCaa                                                                                                                                                                                                                                                                     >  1:22470/1‑287 (MQ=255)
     tCCGGCCCCACCAACCCCGTCACATAACCGGCGTGAATGGTACAATCGAGCGGCGCGACGGCGGGCTTGTCCATGCCCGGAAAGCGTTTTTCCAGGCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCaa                                                                                                                                                                                                                                                                     >  1:710839/1‑287 (MQ=255)
     tCCGGCCCCACCAACCCCGTCACATAACCGGCGTGAATGGTACAATCGAGCGGCGCGACGGCGGGCTTGTCCATGCCCGGAAAGCGTTTTTCCAGGCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCaa                                                                                                                                                                                                                                                                     >  1:76760/1‑287 (MQ=255)
     tCCGGCCCCACCAACCCCGTCACATAACCGGCGTGAATGGTACAATCGAGCGGCGCGACGGCGGGCTTGTCCATGCCCGGAAAGCGTTTTTCCAGGCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCaa                                                                                                                                                                                                                                                                     >  2:172087/1‑287 (MQ=255)
     tCCGGCCCCACCAACCCCGTCACATAACCGGCGTGAATGGTACAATCGAGCGGCGCGACGGCGGGCTTGTCCATGCCCGGAAAGCGTTTTTCCAGGCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCaa                                                                                                                                                                                                                                                                     >  1:1431775/1‑287 (MQ=255)
     tCCGGCCCCACCAACCCCGTCACATAACCGGCGTGAATGGTACAATCGAGCGGCGCGACGGCGGGCTTGTCCATGCCCGGAAAGCGTTTTTCCAGGCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCaa                                                                                                                                                                                                                                                                     >  1:1070358/1‑287 (MQ=255)
     tCCGGCCCCACCAACCCCGTCACATAACCGGCGTGAATGGTACAATCGAGCGGCGCGACGGCGGGCTTGTCCATGCCCGGAAAGCGTTTTTCCAGGCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAAt                                                                                                                                                                                                                                                                    >  2:556989/1‑288 (MQ=255)
     tCCGGCCCCACCAACCCCGTCACATAACCGGCGTGAATGGTACAATCGAGCGGCGCGACGGCGGGCTTGTCCATGCCCGGAAAGCG‑TTTTCCAGGCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGGCGGTTTTCGGGGTAAATTCAGCAGCTGGCGAAACGAAACCaa                                                                                                                                                                                                                                                                     >  2:408191/1‑286 (MQ=255)
        ggCGCCACCCACGCCGTCACATAACCGGCGTGAATGGTACAATCGGGCGGCGCGACGGCGCGCTTGTCCATGCCCGGAAAGCGTTTTTCCAGGCCGTTCAGCGTTATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGTTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGc                                                                                                                                                                                                                                                                <  1:1653684/289‑1 (MQ=255)
               ccaACCCCGTCACATAACCGGCGTGAATGGTACAATCGAGCGGCGCGACGGCGGGCTTGTCCATGCCCGGAAAGCGTTTTTCCAGGCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCCGATCCGGCGTTTCCACGGTTTTCGGGGTAACTTCAGCAGTCGGCGAAACGAAACCAACCTCCCCGTGAt                                                                                                                                                                                                                                                         >  2:1858392/1‑289 (MQ=255)
                        tCACATAACCGGCGTGAATGGTACAATCGAGCGGCGCGACGGCGGGCTTGTCCATGCCCGGAAAGCG‑TTTTCCAGGCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTAAGCAGTCGGCGAAACGACACCAATCTGCCCGTGCTCCGGCTTGt                                                                                                                                                                                                                                                >  2:1079767/1‑288 (MQ=255)
                            aTAACCGGCGTGAATGGTACAATCGAGCGGCGCGACGGCGGGCTTGTCCATGCCCGGAAAGCGTTTTTCCAGGCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACACTACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGCTGTCGGGGTAAAGTCATCAGTCGACGAAACGAAACCACTCTGCCCGTGCTCCGGCGTGTCggg                                                                                                                                                                                                                                            >  2:1219298/1‑289 (MQ=255)
                                  ggCGTGAATGGTACAATCGAGCGGCGCGGCGGCGGGCTTGTCCATGCCCGGAAAGCGTTTTTCCAGGCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGAcc                                                                                                                                                                                                                                      <  1:66933/289‑1 (MQ=255)
                                     gTGAATGGTACAATCGAGCGGCGCGACGGCGGGCTTGTCCATGCCCGGAAAGCGTTTTTCCAGGCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCAt                                                                                                                                                                                                                                    <  2:1271504/288‑1 (MQ=255)
                                     gTGAATGGTACAATCGAGCGGCGCGACGGCGGGCTTGTCCATGCCCGGAAAGCGTTTTTCCAGGCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCAt                                                                                                                                                                                                                                    <  1:637981/288‑1 (MQ=255)
                                     ctGACTGGCACGATCGCGAGGCGGTCCGGCGGCTTTGTCCATGCCCGGAAAGCGGTTTTCCAGGCCGTTCAGCGTGATAAAGGAATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGCCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCAt                                                                                                                                                                                                                                    <  2:843290/287‑1 (MQ=255)
                                      tGAATGGTACAATCGAGCGGCGCGACGGCGGGCTTGTCCATGCCCGGAAAGCGTTTTTCCAGGCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCg                                                                                                                                                                                                                                  >  1:809891/1‑289 (MQ=255)
                                             tACAATCGAGCGGCGCGACGGCGGGCTTGTCCATGCCCGGAAAGCGTTTTTCCAGGCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCAGGGCGGCCATCGGTATaaa                                                                                                                                                                                                                           >  1:105784/1‑289 (MQ=255)
                                                       cggcgCGACGGCGGGCTTGTCCATGCCCGGAAAGCGTTTTTCCAGGCCGTTCAGCGTGATAACGGCCTCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCCGGCGATAGACCAGGTCGGTACGCAGATCCGGCCTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTTCCCGTGTTACGGCTTGTCCGGGCGACACTCCGTCAAAAGCCGCACt                                                                                                                                                                                                                   >  2:1887376/1‑287 (MQ=255)
                                                       cggcgCGACGGCGGGCTTGTCCATGCCCGGAAAGCGTTTTTCCAGGCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACttt                                                                                                                                                                                                                 >  2:605552/1‑289 (MQ=255)
                                                       cggcgCGACGGCGGGCTTGTCCATGCCCGGAAAGCGTTTTTCCAGGCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGACTGTCCGGGCGACCACCGGTATAAAGCAGCCCttt                                                                                                                                                                                                                 >  2:158755/1‑289 (MQ=255)
                                                                   gggCTTGTCCATGCCCGGAAAGCGTTTTTCCAGGCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCt                                                                                                                                                                                                      <  1:967999/288‑1 (MQ=255)
                                                                       ttGTCCATGCCCGTAATGCGTTTTTCCAGGCCGTTCAGCGTGATAACTGCATCATTCATGTCCTGCCTCGTCACAGAATTGTACCGTCACTGGCATGCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCGGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGc                                                                                                                                                                                                  <  2:1786322/288‑1 (MQ=255)
                                                                          tCCATGCCCGGAAAGCGTTTTTCCAGGCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTgg                                                                                                                                                                                              <  2:516368/289‑1 (MQ=255)
                                                                              tGCCCGGAAAGCGTTTTTCCAGGCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCAGCGGTATAAAGCAGCACTTTGCGCCCCGGCTGCGCCCGGTCaa                                                                                                                                                                                          >  2:1468259/1‑289 (MQ=255)
                                                                                cccGGAAAGCGTTTTTCCAGGCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGa                                                                                                                                                                                        <  2:990424/289‑1 (MQ=255)
                                                                                    gAAAGCGTTTTTCCAGGCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGGATAAAGCAGCACTTTGCGCCCCGGCGGGGCCTGGTCCAGATTAc                                                                                                                                                                                    >  2:76082/1‑289 (MQ=255)
                                                                                         cGTTTTTCCAGGCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTtca                                                                                                                                                                               >  1:935128/1‑289 (MQ=255)
                                                                                           tttttCCAGGCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTtcatc                                                                                                                                                                             >  1:898431/1‑289 (MQ=255)
                                                                                                   ggCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCCCCGCGGCTGGGCCTGGTCAAGATTAACTTCATCAACCTaa                                                                                                                                                                      >  2:250647/1‑288 (MQ=255)
                                                                                                    gCCGTTCAGCGGGGTAACGGCATCATTCATGTCCTGCCTCGTCACCGAAGTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAg                                                                                                                                                                     <  2:168526/288‑1 (MQ=255)
                                                                                                      cGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAgcg                                                                                                                                                                   <  1:172087/288‑1 (MQ=255)
                                                                                                      cGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAgcc                                                                                                                                                                   <  1:1364849/288‑2 (MQ=255)
                                                                                                             cGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCAt                                                                                                                                                                                                                                    >  1:1242423/1‑216 (MQ=255)
                                                                                                             cGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCAt                                                                                                                                                                                                                                    <  2:1242423/216‑1 (MQ=255)
                                                                                                                    aaggCGTCATTCCTGGCATGCCTCGTCACCGATTTGTACCGTAACTGGCATGCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGa                                                                                                                                                    <  2:792631/287‑1 (MQ=255)
                                                                                                                    aCGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGa                                                                                                                                                    <  1:119603/289‑1 (MQ=255)
                                                                                                                         atcatTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGt                                                                                                                                               <  1:187886/289‑1 (MQ=255)
                                                                                                                                gtGTCCTGCCGAGTACCAGGATTGTTCCGAAACTGGCATTCCCGTGCGTAACGCATCATCGGCGTCGGGCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAgtgaa                                                                                                                                        <  2:1797498/288‑5 (MQ=255)
                                                                                                                                atGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAgtgaa                                                                                                                                        >  1:623782/1‑285 (MQ=255)
                                                                                                                                atGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAgtgaa                                                                                                                                        <  1:1791735/289‑5 (MQ=255)
                                                                                                                                   tCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAgtgaa                                                                                                                                        <  2:642702/286‑5 (MQ=255)
                                                                                                                                    ccTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAgtgaaacgg                                                                                                                                    >  2:653405/1‑281 (MQ=255)
                                                                                                                                        ccTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCACGATTACGTTCATCAACATAAGCGCGCACCCACCCCGGACGCGTTAGTCGACCGGTaaa                                                                                                                                >  1:1351527/1‑289 (MQ=255)
                                                                                                                                        ccTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTaaa                                                                                                                                >  1:1496843/1‑289 (MQ=255)
                                                                                                                                        ccTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTaaa                                                                                                                                >  2:530267/1‑289 (MQ=255)
                                                                                                                                        ccTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTaaa                                                                                                                                >  1:361925/1‑289 (MQ=255)
                                                                                                                                        ccTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTaa                                                                                                                                 >  1:911062/1‑288 (MQ=255)
                                                                                                                                             tCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGCCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCCCCCACAGCGGACGCGCTCGTTAAACGGTAAACACCg                                                                                                                           >  2:223231/1‑289 (MQ=255)
                                                                                                                                                ccGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAgcgcg                                                                                                                                                                 <  2:1913311/248‑1 (MQ=255)
                                                                                                                                                  gAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACCCCGGCAGCGTTAGTGAAACGGTAAACACCGTGcc                                                                                                                       >  2:957551/1‑288 (MQ=255)
                                                                                                                                                    tttGTACCGTCACTGGCCTGCCCTGGCGTACAGCATCATCGGCGTGGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCAc                                                                                                                     <  2:15580/287‑1 (MQ=255)
                                                                                                                                                    aTTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCAc                                                                                                                     <  1:209331/288‑1 (MQ=255)
                                                                                                                                                    aTTGTAACGTAAGTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCAc                                                                                                                     <  2:1093811/288‑1 (MQ=255)
                                                                                                                                                     ttGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCt                                                                                                                   <  1:1472422/289‑1 (MQ=255)
                                                                                                                                                          ccGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGc                                                                                                                                                                                                                                                    <  1:1923660/155‑1 (MQ=255)
                                                                                                                                                            ttgccTGGCATTCCCTGCCGTAACGGATCATCGGCTCCGTGCACCATCATCCGCATGCGCTAGGCGAGGTCGGTACGCAGATCCTGCGTTTCGACGGTTTTCGGGGTCACTTCCGCAGTCGGCGCAACGAAACCCATCTGCCCGTGATACGGCTTGTCCCGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGa                                                                                                            <  2:1429794/285‑1 (MQ=255)
                                                                                                                                                              cACTGGCATTCCCTGGCTTAACGCATAATCGGCGTCGGTCACCACAATACGCGGGCGATAGACGGGGTCGGTACGCAGACCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAg                                                                                                           <  2:731656/288‑1 (MQ=255)
                                                                                                                                                                    cATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCCTTGAGGACCGt                                                                                                     >  1:1326132/1‑288 (MQ=255)
                                                                                                                                                                       tCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCGGGGCCTGGTCAAGATTACGTTCCTCAACATCAGCGCCCACCCACACCGGACCCGCTAGTGAAACGGGTAACAACGTGCCACCTGCATTAGCGACCGTTccg                                                                                                 >  2:686760/1‑288 (MQ=255)
                                                                                                                                                                       tCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAAGACGCAGGCGATAGACGAGGTCGGTCCGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCATGTCCGGGCGGCCATCGGTATAAAGAATCCCTTTGCGCACCGGCTTGGCCTGGTTATGGTTACGGTCATTAACATAAGCACGAAACCACACCGGACGCGGCAGTGACACGGGACACATCGTTCCCCCTTCCTTGTCAACCGTGcat                                                                                                 >  2:1030750/1‑287 (MQ=255)
                                                                                                                                                                         ccTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTgg                                                                                               <  1:653405/289‑1 (MQ=255)
                                                                                                                                                                          cTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGa                                                                                                                                                    <  1:1275310/235‑1 (MQ=255)
                                                                                                                                                                                 accGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACcg                                                                                       <  1:1079767/287‑1 (MQ=255)
                                                                                                                                                                                 aaCGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACcg                                                                                       <  1:1024012/289‑1 (MQ=255)
                                                                                                                                                                                 aaCGAATCATCGGCGGCGGTAACCACAATACGCAGGCGATAGACTAGGTCGGTAGGCAGTTCCGGCGTTTCGACGGTGTTCGGGGTAAATACAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGGTACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTGTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACcg                                                                                       <  2:570966/289‑1 (MQ=255)
                                                                                                                                                                                  aCGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGAcgc                                                                                                                                                 <  2:1309075/230‑1 (MQ=255)
                                                                                                                                                                                   cGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGcc                                                                                                                                                                                                            <  1:590509/170‑1 (MQ=255)
                                                                                                                                                                                   cGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACcgcg                                                                                     <  1:556989/289‑1 (MQ=255)
                                                                                                                                                                                   cGCATAATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGCTCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACcgcg                                                                                     <  1:1636491/289‑1 (MQ=255)
                                                                                                                                                                                       tcatcGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACcgcgcgcg                                                                                 >  1:724059/1‑289 (MQ=255)
                                                                                                                                                                                        catggggggcGGTCCCCACAATACGCGGGCGATGGCCGAGGTCGGTACGAGGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGcc                                                                                                  <  2:902191/262‑1 (MQ=255)
                                                                                                                                                                                             gcggcgGTCACCCCAATACGCAGGCGATAGCCGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAAc                                                                            <  2:935128/288‑1 (MQ=255)
                                                                                                                                                                                                 cGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCg                                                                        <  1:1603700/288‑1 (MQ=255)
                                                                                                                                                                                                  ggTCACCACAATAGGCAGGCGATAGACGAGGGCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTg                                                                      <  1:33515/289‑1 (MQ=255)
                                                                                                                                                                                                          caATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGa                                                              <  1:1858392/289‑1 (MQ=255)
                                                                                                                                                                                                          caAGACGCAGGCGATAGACGGGGTCGGTACGCAGGTCCGGCGTTTCGACGGTTTTCGGGGTAAATGCAGCAGGCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGa                                                              <  2:1182815/289‑1 (MQ=255)
                                                                                                                                                                                                              aggcgggCGATAGACGAGGTCGGGAGGCAGGTCCCGCGTTTGGACGGGTTTCGGGGTAAATTCAGCGGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACggg                                                          <  2:710839/284‑1 (MQ=255)
                                                                                                                                                                                                              aCGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACggg                                                          <  1:760804/289‑1 (MQ=255)
                                                                                                                                                                                                                  aGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGCCCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCCCCTTCATTGAGGACCGTGCCTGGCTCCACCGCTCCCGTTAACAGCGGGCTATCCGCCGGGGCTa                                                      >  2:1059373/1‑289 (MQ=255)
                                                                                                                                                                                                                    gggaaaGACGAGGTGGGTACGCAGTTCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTAt                                                     <  2:329130/283‑1 (MQ=255)
                                                                                                                                                                                                                    gCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTAt                                                     <  2:623782/288‑1 (MQ=255)
                                                                                                                                                                                                                    gCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATc                                                    >  1:1480164/1‑289 (MQ=255)
                                                                                                                                                                                                                            cGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGttga                                            <  1:408191/289‑4 (MQ=255)
                                                                                                                                                                                                                              aGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACCTAAGCGCCCACCCACACCGGCCGCGTTACTGCAACGGTAAAAACCGTGCCACCTTCATTCAGGACCCTGCCTGGCTCCACCTCGCCCGTTAACAGCGTGCCATCCGACCGGGCTATCAAccttgtg                                           >  2:1760665/1‑282 (MQ=255)
                                                                                                                                                                                                                               ggTGGGTACGCAGATCCGGGCTGTGGACGGTTTTCGGGGGAAGTTAGTCAGTCGGCACAACGACACCACTCTGCCGGTGCTCCGGCTGGTCCGGGCGACCATCGGTATAAGGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATGAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCCACGttgagt                                          <  2:1650983/288‑6 (MQ=255)
                                                                                                                                                                                                                               ggTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGttgagt                                          <  2:376337/288‑6 (MQ=255)
                                                                                                                                                                                                                                          aGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACcgcg                                                                                     >  1:94692/1‑234 (MQ=255)
                                                                                                                                                                                                                                               cGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGt                                                                                                                                               <  1:999133/171‑1 (MQ=255)
                                                                                                                                                                                                                                               cGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCCTGCCTGGCTCCACCGCCCGCGTTAACAGCGTGCCATCAGACGGGGCTATCCACGTTGAGTCCCGTAAATTCACCTc                          >  2:1377827/1‑288 (MQ=255)
                                                                                                                                                                                                                                                      tCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTTTAAATTCAACTCCGCCTgc                   >  1:1391466/1‑288 (MQ=255)
                                                                                                                                                                                                                                                      tCGACGGTTTTCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAAAGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCCTTAACCGCGTTCCATCAGACGGGGCTTTCAACGATGAGTCCTGCAAATTCAACTCCGCCTgc                   >  2:778770/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                tCGGGGTAAATTCAGCAGTCGGCGAAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTtgcgc        <  1:538774/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                              
CACCGTCCGGCCCCACCAACCCCGTCACATAACCGGCGTGAATGGTACAATCGAGCGGCGCGACGGCGGGCTTGTCCATGCCCGGAAAGCGTTTTTCCAGGCCGTTCAGCGTGATAACGGCATCATTCATGTCCTGCCTCGTCACCGAATTGTACCGTCACTGGCATTCCCTGGCGTAACGCATCATCGGCGTCGGTCACCACAATACGCAGGCGATAGACGAGGTCGGTACGCAGATCCGGCGTTTCGACGGTTTTCGGGGTAAATTCAGCAGTCGGGCTAACGAAACCAATCTGCCCGTGATACGGCTTGTCCGGGCGACCATCGGTATAAAGCAGCACTTTGCGCCCCGGCTGGGCCTGGTCAAGATTACGTTCATCAACATAAGCGCGCACCCACACCGGACGCGTTAGACTAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTACTGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGC  >  CP042583/691725‑692275

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A