Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 706,710 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583706,7100GC99.3% 682.6 / NA 294intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/2);  new base C (146/146);  total (146/148)
Fisher's exact test for biased strand distribution p-value = 4.98e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583706,7110CG99.0% 672.8 / NA 294intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/1);  major base G (144/144);  minor base A (0/3);  total (146/148)
Fisher's exact test for biased strand distribution p-value = 2.47e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01
*CP042583706,7120TA99.7% 694.3 / NA 294intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (146/147);  minor base C (0/1);  total (146/148)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 294 total aligned reads displayed.

TTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACGCTACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATGCTAGACCACGGAATGATGTGA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATGCTCATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGGC‑TACCAAAGCTGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCGCTCAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCGCTAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCGCTGAAGAAAAGAATGAGTGCGATACGGATCAGGATATCTACGGTTTT  >  CP042583/706434‑706991
                                                                                                                                                                                                                                                                                     ||||                                                                                                                                                                                                                                                                                        
 ttCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCGGCGTTTGCG‑AACCaaacgaga                                                                                                                                                                                                                                                                               >  2:1580683/1‑284 (MQ=255)
   cAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCaaacgagata                                                                                                                                                                                                                                                                             >  1:1571859/1‑282 (MQ=255)
           gATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGCGACAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCaaaa                                                                                                                                                                                                                                                                      >  2:118542/1‑285 (MQ=255)
                gCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAAt                                                                                                                                                                                                                                                                 >  2:1027710/1‑288 (MQ=255)
                          cATCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAc                                                                                                                                                                                                                                                       >  2:321554/1‑288 (MQ=255)
                           aTCTTCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATAACCCAGTGATAATATCTTTCACCAGCGTTTGCC‑AACCAAACGAGATAGCCCAACCTAAGTCCCCGGCAc‑c                                                                                                                                                                                                                                                     >  2:1761584/1‑288 (MQ=255)
                               tCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATACCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAAGCAGCCCTAATTCCCCGCCAc‑cgtcc                                                                                                                                                                                                                                                 >  2:957612/1‑284 (MQ=255)
                                cATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAc                                                                                                                                                                                                                                                       <  1:1154412/282‑1 (MQ=255)
                                       aTCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCCCCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATTCCCCCGCCC‑CCTCCAGCAACGgc                                                                                                                                                                                                                                        >  2:1819708/1‑289 (MQ=255)
                                       aTCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATgg                                                                                                                                                                                                                                         >  2:722800/1‑288 (MQ=255)
                                       aTCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTGTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTTCCAGCATTGgc                                                                                                                                                                                                                                        >  1:359577/1‑289 (MQ=255)
                                        tCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGCGTTCATGCCGTTTTCAAACTGAATAAATACCCCTGTGATAATATCTTTCACCAGCTGTTGCG‑AACGAAACCAACTAGCCAGACCTAATTCCCCAGCAC‑CCGCCCGCAATTgc                                                                                                                                                                                                                                        >  2:524333/1‑288 (MQ=255)
                                                    tttGCCACCACCGAGCAAATGCCGCGGACAAAGTTAGCAAAGGTCGTTAGCGAAGCCCACGGAATGATGGAA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGGTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGc                                                                                                                                                                                                                           <  2:582103/289‑1 (MQ=255)
                                                           ccaccgaaCCAGTCCCGCGGAAAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTc                                                                                                                                                                                                                    <  2:552424/282‑1 (MQ=255)
                                                                      aTGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCCCCAAATCTCCAGTGTTCATGCCGTTTTCCAACTGAATAAATACCCCGGGGATAATCTCTTTCACCAGCGTTCGCG‑AACCAAAAGAGATCGCCAGACATAATGCCCCGGCAC‑CTGCACCCAGCGCCGCGATATTCACCCCGGTGTCCGACAAcaca                                                                                                                                                                                                          >  2:1287112/1‑288 (MQ=255)
                                                                      aTGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACaa                                                                                                                                                                                                         >  1:1681734/1‑289 (MQ=255)
                                                                         ccacgGACAAAGTTACCAAAGCGGGTTATCGAAGACCGCGGAATGCT‑TGAGTACCCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCGCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGGGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAAt                                                                                                                                                                                                        <  2:1640164/284‑1 (MQ=255)
                                                                            cgGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATTCCCCTGCTC‑CTGCCAGCAATTGCCTGAGATGCACCCAGACTTCCCTCAaccaaacactag                                                                                                                                                                                                   >  2:1339476/1‑279 (MQ=255)
                                                                            cgGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCatga                                                                                                                                                                                                   >  1:1623039/1‑289 (MQ=255)
                                                                            cgGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCatg                                                                                                                                                                                                    <  2:1524633/288‑1 (MQ=255)
                                                                            cgGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAAAGGCGCGATATTGACGCCGATTTCCGACAACACAATCatga                                                                                                                                                                                                   >  1:324388/1‑289 (MQ=255)
                                                                             ggACAAAGTTAGCAAAGGTAGTTATCGAAGACCACGGAATGATGTGA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCatga                                                                                                                                                                                                   <  2:1860802/288‑1 (MQ=255)
                                                                                  aaGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCAtgatggtga                                                                                                                                                                                             <  2:1406965/289‑1 (MQ=255)
                                                                                       aGCCAAGGTGGTTATCGAAGCCCACGGAATGATGGTA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTa                                                                                                                                                                                        <  1:1214772/289‑1 (MQ=255)
                                                                                           aaGGTGGTTATCGAAGACCACGGAATGATGTGA‑GACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGa                                                                                                                                                                                    <  1:1868932/289‑1 (MQ=255)
                                                                                             ggtggtTATCGAAGACCACGGAATGATGTGA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGc                                                                                                                                                                                                                                                  >  1:916701/1‑225 (MQ=255)
                                                                                             ggtggtTATCGAAGACCACGGAATGATGTGA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATa                                                                                                                                                                                  >  2:933393/1‑289 (MQ=255)
                                                                                              gtggtTATCGAAGACCACGGAATGATGTGA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTCCCAACAATGGCGCGATATTGACGCCGATTTCCGACAACACAAACATGATGGCGATGGTACTGATaa                                                                                                                                                                                 >  1:527246/1‑289 (MQ=255)
                                                                                                        aaGACCACGGAATGATGTGA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCa                                                                                                                                                                        >  1:616815/2‑288 (MQ=255)
                                                                                                         aGACCACGGAATGATGTGA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAg                                                                                                                                                                       <  1:1926082/288‑1 (MQ=255)
                                                                                                         aGACCACGGAATGATGTGA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAg                                                                                                                                                                       <  1:321554/288‑1 (MQ=255)
                                                                                                            ccACGGAATGATGTGA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAgcg                                                                                                                                                                     <  2:136231/287‑1 (MQ=255)
                                                                                                               cGGAATGATGTGA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGtt                                                                                                                                                                 >  2:1261613/1‑288 (MQ=255)
                                                                                                                ggAATGATGTGA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATAACCGCCAGCGCGTTAc                                                                                                                                                               >  1:699471/1‑289 (MQ=255)
                                                                                                                   atgatgTGA‑TACTCCCCGTTATCCTGTCGTACGCCATCGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGaa                                                                                                                                                            <  1:39583/289‑1 (MQ=255)
                                                                                                                    tgatgTGA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGaaa                                                                                                                                                           <  1:1371699/289‑1 (MQ=255)
                                                                                                                       tgtgA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACa                                                                                                                                                         >  1:154533/1‑288 (MQ=255)
                                                                                                                          gA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCg                                                                                                                                                      <  2:1153448/288‑1 (MQ=255)
                                                                                                                             tACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTa                                                                                                                                                    <  1:128331/288‑1 (MQ=255)
                                                                                                                                gCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCa                                                                                                                                                <  1:94104/289‑1 (MQ=255)
                                                                                                                                  cccGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGaa                                                                                                                                                            <  1:768011/275‑1 (MQ=255)
                                                                                                                                  cccGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAgg                                                                                                                                              >  1:1894556/1‑289 (MQ=255)
                                                                                                                                            tGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCatgat                                                                                                                                                                                                  >  1:595883/1‑227 (MQ=255)
                                                                                                                                               cGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGgcg                                                                                                                                                                                                                                       <  2:838951/187‑1 (MQ=255)
                                                                                                                                               cGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGgcg                                                                                                                                                                                                                                       >  1:838951/1‑187 (MQ=255)
                                                                                                                                                 tACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGgc                                                                                                                                >  2:1719493/1‑288 (MQ=255)
                                                                                                                                                 tACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGGCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTGCCTAAACAGCCAAAGAAGGGTACACGTCCGGgc                                                                                                                                >  2:896797/1‑288 (MQ=255)
                                                                                                                                                  aCGCCCACGGAGCGAATCGACATCCGTTCCACTTTGCCGGTAAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGgcg                                                                                                                               <  1:1244560/288‑1 (MQ=255)
                                                                                                                                                     cccACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCCCGTTACGAAAACGACAAAGCAGGGTACGCGTGGGGgcgcgtg                                                                                                                           >  2:3419/1‑286 (MQ=255)
                                                                                                                                                        aCGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTa                                                                                                                        >  1:1115631/1‑289 (MQ=255)
                                                                                                                                                         cGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATAGACGCCGATTTTCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGTGTAAGAAGGGTACGCGTGCGGGCGCGGGGTAg                                                                                                                       >  1:1046653/1‑289 (MQ=255)
                                                                                                                                                               gaatcgacATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAgcggg                                                                                                                   <  1:1719493/280‑1 (MQ=255)
                                                                                                                                                                aatcgacATCCGTTCCCCTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCa                                                                                                                                                <  2:601392/251‑1 (MQ=255)
                                                                                                                                                                      cATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCAGGa                                                                                                          >  2:1505744/1‑289 (MQ=255)
                                                                                                                                                                       aTCCGTTCCACTGTGCCGATAAACGGCACGATAGTCACCAAATCTCCATTGTTCATGCCGGTTTCAAACGGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGaa                                                                                                         <  1:234160/289‑1 (MQ=255)
                                                                                                                                                                            ttCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCATAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATcc                                                                                                    >  2:889275/1‑288 (MQ=255)
                                                                                                                                                                                    tgCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGTGCGCTGGGTAGCGGGCGGCCATGAATATccgaagcca                                                                                             >  1:1639198/1‑280 (MQ=255)
                                                                                                                                                                                    tgCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATccgaagcca                                                                                             >  1:1786104/1‑280 (MQ=255)
                                                                                                                                                                                      ccGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAagccagcc                                                                                          >  1:1410058/1‑289 (MQ=255)
                                                                                                                                                                                         gTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTcc                                                                                                                                                                                                                   <  1:455531/165‑2 (MQ=255)
                                                                                                                                                                                              cGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCCGGAAAACCCGAAGCCAGCCGGGTTTCg                                                                                  >  2:1907473/1‑289 (MQ=255)
                                                                                                                                                                                              cGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACAAAATCATGATGGTGATGGTACTGATAATAACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTGCg                                                                                  >  1:261512/1‑289 (MQ=255)
                                                                                                                                                                                                   cGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCaa                                                                             >  1:984579/1‑289 (MQ=255)
                                                                                                                                                                                                    gATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCaaa                                                                            <  2:676799/289‑1 (MQ=255)
                                                                                                                                                                                                            ccAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAg                                                                    <  1:1021895/289‑1 (MQ=255)
                                                                                                                                                                                                            ccAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAg                                                                    <  1:1080627/289‑1 (MQ=255)
                                                                                                                                                                                                                aTCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAg                                                                                                                                                  <  2:413152/207‑1 (MQ=255)
                                                                                                                                                                                                                   tcCAGTTTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTc                                                             <  2:1681734/289‑1 (MQ=255)
                                                                                                                                                                                                                     cAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCa                                                                  <  2:1227773/282‑1 (MQ=255)
                                                                                                                                                                                                                     cAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCa                                                           >  1:230095/1‑289 (MQ=255)
                                                                                                                                                                                                                             aTGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCTGCGCGCTACGAAACAGCGTAAGCAGGGTAAGCGTGCGGGCGCTGGGTAGCGGGTGGCCATGAATATCCGAAGCCAGCCGGTTTTCGACCAATCTGTCGCGCACAGTCCAGCCAAcc                                                    >  2:254137/1‑288 (MQ=255)
                                                                                                                                                                                                                                   tattCAAACGGAAAAAATACCCCGGTGCTTATAACTATCACCAGCCTTTGCA‑CACCACACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAATCTGGCGAGCACCGTCCAGCCAACcgccgaga                                             <  2:261512/287‑6 (MQ=255)
                                                                                                                                                                                                                                    tttCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACcgccgagga                                            >  1:680434/1‑283 (MQ=255)
                                                                                                                                                                                                                                           cTGAATAAATACCCCGGTGATAATGTCTTGCACCAGCGTTGGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGaagaaaaga                                     <  1:1578988/289‑1 (MQ=255)
                                                                                                                                                                                                                                             gcataacaaCCCCGGTTATAGTAACTTTCACCA‑AGTTTGGCAAACGAAACGGGATAGCAAGACCTAATGCCCCGGCAC‑CTGCAGGAAAGTGCGCAGTATTGACACCGATTTCCGACAACAAAATCATGATGGTGATGGTACTGATAATGACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAAt                                   <  2:1894556/281‑1 (MQ=255)
                                                                                                                                                                                                                                             gAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCATAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAAt                                   <  1:889275/289‑1 (MQ=255)
                                                                                                                                                                                                                                               agaaataACCCTGTGATGATAGGTGTCACCGGCGGTGGCG‑AACCAAACGACATAACCTGTCCTATGGCCACGGCAC‑CTGCCAGCAAGGAGGCGATATTGACGCCGATTTCCGAAAACACAGTCAGGATGGGGATGGTACTGATAAGCACCGCCAGCGCTTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGAGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATAAAACTGGCGAGTACTGTCCAGCCAACCGCCGAGAAGAAAAGAAt                                   <  2:1117731/285‑1 (MQ=255)
                                                                                                                                                                                                                                                taaataCCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAg                                <  1:1910050/289‑1 (MQ=255)
                                                                                                                                                                                                                                                 aaataCCCCGAGGATACTATCTTTCCCCAGCGTTTGGG‑AACCAAACGAGATAGCACGACCTAATGCCCCGGCAC‑CTGCCA‑CAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTg                              <  2:1075640/289‑1 (MQ=255)
                                                                                                                                                                                                                                                    taCCCCGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCg                            <  1:896797/289‑1 (MQ=255)
                                                                                                                                                                                                                                                      ccccGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGAt                          <  1:1339476/289‑1 (MQ=255)
                                                                                                                                                                                                                                                       cccTGTGTTATTATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATa                         <  2:693615/289‑1 (MQ=255)
                                                                                                                                                                                                                                                       cccGTTGATATTATGTTTCCCCATCGTTTGCG‑AACCGAAGAGGTATGCCTAACCTACAGCCCC‑GCACGCTGACGGTAATGGCGCGAGATTGAGGCCGAGTTCCGACCACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGTGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATa                         <  2:437325/289‑1 (MQ=255)
                                                                                                                                                                                                                                                        ccGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGa                                                                                                                                                                                    >  2:1483718/1‑133 (MQ=255)
                                                                                                                                                                                                                                                        ccGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGa                                                                                                                                                                                    <  1:1483718/133‑1 (MQ=255)
                                                                                                                                                                                                                                                        ccGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCaa                                                      <  1:20537/259‑1 (MQ=255)
                                                                                                                                                                                                                                                        ccGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCaa                                                      >  2:20537/1‑259 (MQ=255)
                                                                                                                                                                                                                                                        ccGGTGATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATAc                        >  2:365149/1‑289 (MQ=255)
                                                                                                                                                                                                                                                        ccGGTGATAATATCTTTCACAAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCAGGTTTTCGATAAAACTGGCGAGCACCGTCCAGCAAACCGCCGAGAAGAAAAGAATGAGTGCGATAc                        >  1:736010/1‑289 (MQ=255)
                                                                                                                                                                                                                                                             gATAATATCTTTCACCAGCGTTTGCG‑AACCAACCGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATACGGAt                    <  1:1290371/288‑1 (MQ=255)
                                                                                                                                                                                                                                                             gATAATATCTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATACGGAt                    <  1:50683/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                     cTTTCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGATGGGTAGCGGGCGGCCATGGATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGACGAGAAGCAAATAATGAGTGCGATAAGAATCAGGataac           >  1:1750043/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                       ttCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATACGGATCAGGATATCTa         <  1:1432974/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                        tCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCa                                                                  <  1:1812580/231‑1 (MQ=255)
                                                                                                                                                                                                                                                                        tCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATACGGATCAgg                >  1:670054/1‑281 (MQ=255)
                                                                                                                                                                                                                                                                        tCACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATACGGATCAg                 >  2:621072/1‑280 (MQ=255)
                                                                                                                                                                                                                                                                         cACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATGATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATACGGATCAGGATATCTACg       <  2:230095/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                         cACCAGCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGAAAAGAATGAGTGCGATACGGATCAGGATATCTACg       <  1:426326/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                              gCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGgcgc                                                                                                                              >  1:1013460/1‑165 (MQ=255)
                                                                                                                                                                                                                                                                              gCGTTTGCG‑AACCAAACGAGATAGCCAGACCTAATGCCCCGGCAC‑CCGCCAGCAATGGCGCGATATTGACGCCGATTTCCGACAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCCGAAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCCGAGAAGACAAGAATGAGTGCGATACGGACCAGGATATCCACGGtttt  >  2:506795/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                     ||||                                                                                                                                                                                                                                                                                        
TTTCAGTGCCTGATTGGCTTTATCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCACGCTACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATGCTAGACCACGGAATGATGTGA‑TACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATGCTCATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCACCAAATCTCCAGTGTTCATGCCGTTTTCAAACTGAATAAATACCCCGGTGATAATATCTTTCACCAGCGTTTGGC‑TACCAAAGCTGATAGCCAGACCTAATGCCCCGGCAC‑CTGCCAGCAATGGCGCGATATTGACGCCGATTTCGCTCAACACAATCATGATGGTGATGGTACTGATAATCACCGCCAGCGCGTTACGAAACAGCGTAAGCAGGGTACGCGTGCGGGCGCTGGGTAGCGGGCGGCCATGAATATCGCTAGCCAGCCGGTTTTCGATCAAACTGGCGAGCACCGTCCAGCCAACCGCGCTGAAGAAAAGAATGAGTGCGATACGGATCAGGATATCTACGGTTTT  >  CP042583/706434‑706991

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A