Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 710,875 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583710,8750AT99.6% 581.9 / NA 244intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (102/141);  minor base G (1/0);  total (103/141)
Fisher's exact test for biased strand distribution p-value = 4.22e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583710,8760CG99.6% 576.6 / NA 244intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (103/140);  minor base T (0/1);  total (103/141)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583710,8770TA99.6% 579.2 / NA 244intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base A (103/140);  total (103/141)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.96e-01

Only 100 of 244 total aligned reads displayed.

TTTTTTACGCTCGTCGGTGATGGTAATGCCCGCCAGCGCCAGATCGACGTTTTTGGTTTGCAGTGCCGGAATGATCCCACTGAAATCCATCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGACTAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTGATTATTTAGCGTAAAACCTGATGAAAAAACAATCTTTATGTAACGATTGTGTGATGA  >  CP042583/710602‑711153
                                                                                                                                                                                                                                                                                 |||                                                                                                                                                                                                                                                                                    
ttttttACGCTCGTCGGTGATGGTAATGCCCGCCAGCGCCAGATCGCCGTTTTTGGTTTGCAGTGCCGGAATGATCCCACTGAAATCCATCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACa                                                                                                                                                                                                                                                                         <  1:723755/289‑1 (MQ=255)
ttttttACGCTCGTCGGTGATGGTAATGCCCGCCAGCGCCAGATCGCCGTTTTTGGTTTGCAGTGCCGGAATGATCCCACTGAAATCCATCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGAGGGCAGCCCACAGATCAACGTCAAAGCCCACATATGTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACa                                                                                                                                                                                                                                                                         <  1:513518/289‑1 (MQ=255)
              gcgTGATGGTAATGCCCGCCAGCGACAGATCCACGTTTTTGGTTTGCAGTGCCGGAATGATCCCACTGAAATCCATCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCAt                                                                                                                                                                                                                                                            <  2:1575582/286‑1 (MQ=255)
                      gTAATGCCCGCCAGCGCCAGATCGACGTTTTTGGTTTGCAGTGCCGGAATGATCCCACTGAAATCCATCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCttttt                                                                                                                                                                                                                                                   >  1:1359957/1‑289 (MQ=255)
                         aTGCCCGCAACCGCCGGTTGGACGTTTTGGGTTTGCAGTGCCGGAAGTATCCCACGGAAATCCATCGGCTTCAGTTCGAAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCt                                                                                                                                                                                                                                                <  2:45100/289‑1 (MQ=255)
                          tGCCCGCCAGCGCCAGATCGACGTTTTTGGTTTGCAGTGCCGGAATGATCCCACTGAAATCCATCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTa                                                                                                                                                                                                                                               >  1:222560/1‑289 (MQ=255)
                              cgccagcgccagATCGACGTTTTTGGTTTGCAGTGCCGGAATGATCCCACTGAAATCCATCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCa                                                                                                                                                                                                                                           <  1:893563/289‑1 (MQ=255)
                                ccagcgccagATCGACGTTTTTGGTTTGCAGTGCCGGAATGATCCCACTGAAATCCATCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACg                                                                                                                                                                                                                                         >  1:802254/1‑289 (MQ=255)
                                ccagcgccagATCGACGTTTTTGGTTTGCAGTGCCGGAATGATCCCACTGAAATCCATCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACg                                                                                                                                                                                                                                         <  1:937860/289‑1 (MQ=255)
                                 cagcgccagATCGACGTTTTTGGTTTGCAGTGCCGGAATGATCCCACTGAAATCCATCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACg                                                                                                                                                                                                                                         <  1:659380/288‑1 (MQ=255)
                                    cgccagATCGACGTTTTTGGTTTGCAGTGCCGGAATGATCCCACTGAAATCCATCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCt                                                                                                                                                                                                                                                <  2:381774/278‑1 (MQ=255)
                                    cgccagATCGACGTTTTTGGTTTGCAGTGCCGGAATGATCCCACTGAAATCCATCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGAc                                                                                                                                                                                                                                     >  1:580308/1‑289 (MQ=255)
                                     gccagATCGACGTTTTTGGTTTGCAGTGCCGGAATGATCCCACTGAAATCCATCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACg                                                                                                                                                                                                                                    <  2:114839/289‑1 (MQ=255)
                                     gccaagtCGACGTTTTTGGTTTGCAGGCCCGGAATGATCCCCCTGAAATCCATCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCCCAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACggg                                                                                                                                                                                                                                       <  2:898358/280‑1 (MQ=255)
                                          aTCGACGTTTTTGGTTTGCAGTGCCGGAATGATCCCACTGAAATCCATCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATAACGACTTCATAGCATTTCCTTTTTTTTATCAACGGGACGATcc                                                                                                                                                                                                                                >  2:86064/1‑288 (MQ=255)
                                           tCGACGTTTTTGGTTTGCAGTGCCGGAATGATCCCACTGAAATCCATCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATccc                                                                                                                                                                                                                               <  1:346345/288‑1 (MQ=255)
                                           tCGACGTTTTTGGTTTGCAGTGCCGGAATGATCCCACTGAAATCCATCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATc                                                                                                                                                                                                                                 <  2:535728/286‑1 (MQ=255)
                                                 gttttTGTGTGCAGTGCCGGAATGATCCCACTGAAATCCATCGGCTTCAGTTCGTAATCCAACTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGt                                                                                                                                                                                                                         <  2:845729/287‑1 (MQ=255)
                                                         ttGCAGTGCCGGAATGATCCCACTGAAATCCATCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTcac                                                                                                                                                                                                                >  2:1925155/1‑289 (MQ=255)
                                                          tGCAGTGCCGGAATGATCCCACTGAAATCCATCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTcaca                                                                                                                                                                                                               <  1:158258/289‑1 (MQ=255)
                                                                         aTCCCACTGAAATCCATCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACCTATATGAAAAAATCg                                                                                                                                                                                                >  1:1559808/1‑289 (MQ=255)
                                                                         aTCCCACTGAAATCCATCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCg                                                                                                                                                                                                >  1:1274518/1‑289 (MQ=255)
                                                                         aTCCCACTGAAATCCATCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCg                                                                                                                                                                                                >  1:1588807/1‑289 (MQ=255)
                                                                         aTCCCACTGAAATCCATCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCg                                                                                                                                                                                                >  1:1936531/1‑289 (MQ=255)
                                                                           cccACTGAAATCCATCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGt                                                                                                                                                                                               >  2:1686067/1‑288 (MQ=255)
                                                                           cccACTGAAATCCATCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACAAATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGt                                                                                                                                                                                               >  2:957515/1‑288 (MQ=255)
                                                                             cACTGAAATCCATCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGcc                                                                                                                                                                                            <  2:1798779/289‑1 (MQ=255)
                                                                               cTGAAATCCATCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAg                                                                                                                                                                                          <  1:1714375/289‑1 (MQ=255)
                                                                                tGAAATCCATCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGAc                                                                                                                                                                                                                      >  1:543820/1‑260 (MQ=255)
                                                                                  aaaTCCATCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGt                                                                                                                                                                                               >  2:575685/1‑281 (MQ=255)
                                                                                    aTCCATCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGtttt                                                                                                                                                                                      >  1:433347/1‑288 (MQ=255)
                                                                                        aTCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCaa                                                                                                                                                                                  >  2:1952225/1‑288 (MQ=255)
                                                                                          cGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACt                                                                                                                                                                                >  2:1417156/1‑288 (MQ=255)
                                                                                                             cgCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGATATGCg                                                                                                                                                            >  2:1366297/2‑289 (MQ=255)
                                                                                                              gCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATc                                                                                                                                                                                                                                 >  2:778039/1‑219 (MQ=255)
                                                                                                              gCTTCAGCTCTTTAGCGATGGCAGACCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATc                                                                                                                                                                                                                                 <  1:778039/219‑1 (MQ=255)
                                                                                                               cTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGc                                                                                                                                                          >  1:592144/1‑289 (MQ=255)
                                                                                                                    gCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTcc                                                                                                                                                                                                                                                        >  2:1404499/1‑190 (MQ=255)
                                                                                                                      tctTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACg                                                                                                                                                   <  1:316695/289‑1 (MQ=255)
                                                                                                                          tAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGAt                                                                                                                                               >  1:1462084/1‑289 (MQ=255)
                                                                                                                              gATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGc                                                                                                                                             <  2:1462084/287‑1 (MQ=255)
                                                                                                                                tGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACg                                                                                                                                          <  2:802254/288‑1 (MQ=255)
                                                                                                                                  gCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACg                                                                                                                                          <  1:1813805/286‑1 (MQ=255)
                                                                                                                                      cccACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGcc                                                                                                                                                                                            <  1:922487/232‑1 (MQ=255)
                                                                                                                                      cccACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCa                                                                                                                                            >  1:438633/1‑280 (MQ=255)
                                                                                                                                       ccACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTta                                                                                                                                     <  1:86064/286‑1 (MQ=255)
                                                                                                                                       ccACAAATCAAAGACAAAGCCCACATATTTAACGCCCCGTTTAAATACAAAGGGAACGAAGGCGGTATCCGCCGCGACAACTAAATTGTTATCCACGGCATGAGAAGAAACGCCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGAGTta                                                                                                                                     <  2:72428/286‑1 (MQ=255)
                                                                                                                                              tCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAACCGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCa                                                                                                                              <  1:1316884/286‑1 (MQ=255)
                                                                                                                                                aaCGTCAAGGCCCACATATTTATCACCCTGTTTAAATTCAACCGGAACGAAGGCGGTATCCGTACCGACAACTAGTTTTTTATTCGCGGCCTGCGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTGTTAATACAGACTCCATAGCATTTCCTTTTTTCTGTACTCGGGACGGTCCCCTGCGGTACATTTTCGTATGAGAAAAAATCGTGGCGACGTTGCAATCTCTTCATATTTCGAGAGCTGGGAACAACTGTATGACCGAGTTATAGGGCAATAc                                                                                                                          >  2:456105/1‑288 (MQ=255)
                                                                                                                                                aaCGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTACTTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGCCTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGACTTTTCGAGATGCGGCCAAAACGAGATTCACGATTTATAGGGCAATAc                                                                                                                          >  2:911604/1‑288 (MQ=255)
                                                                                                                                                 cggTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAAGGGAAAGAAGGAGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATAccc                                                                                                                        <  2:181084/287‑1 (MQ=255)
                                                                                                                                                 aagTCAAAGCCCACATATATATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATAccc                                                                                                                        <  1:1256229/287‑1 (MQ=255)
                                                                                                                                                 aCGTCAAAGCCCACCTATTTATCGCCCAGTTTAAATTCCAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCAAAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATAccc                                                                                                                        <  2:669278/289‑1 (MQ=255)
                                                                                                                                                    acagaaccagcaTATTTATCGCCCATTTTAAATTCAAACGAAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGa                                                                                                                     <  2:435159/279‑1 (MQ=255)
                                                                                                                                                       aaGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCCCATATATGAAAAAATCGGGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAACCGTGATGCACGATTTATAGGGCAATACCCTGAAGa                                                                                                                  >  2:286018/1‑289 (MQ=255)
                                                                                                                                                           ccaccaatTTATCGCCCTGTTTTAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCa                                                                                                              <  2:1274518/283‑1 (MQ=255)
                                                                                                                                                           ccACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCa                                                                                                              <  1:972852/289‑1 (MQ=255)
                                                                                                                                                                   ttATCGGCCGGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTg                                                                                                      <  1:1196867/289‑1 (MQ=255)
                                                                                                                                                                      tcccccgtgttAAATTCCAACGGAACGAAGGCTGTATCCGTCGCGACAACTTATTTTTTTACCGCGGCATGAGAAGAAACCCCAAAAGCCAGGGTCAGTGCAGCCAATGAAACTTTTAATTCAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATTTGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTgggg                                                                                                   <  2:580308/280‑1 (MQ=255)
                                                                                                                                                                        gCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCCCGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCa                                                                                                 <  1:827448/289‑1 (MQ=255)
                                                                                                                                                                        gCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCa                                                                                                              >  1:215181/1‑276 (MQ=255)
                                                                                                                                                                        gCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAATGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCa                                                                                                              <  2:215181/276‑1 (MQ=255)
                                                                                                                                                                         cccTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTTATGCAGGAATTCTAGGGCAATACCCTGAATATGCACCATTCTgggggc                                                                                                 >  2:1873882/1‑286 (MQ=255)
                                                                                                                                                                            tGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCaa                                                                                             >  1:1065698/1‑289 (MQ=255)
                                                                                                                                                                             gTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTta                                                                                                                                     <  2:63489/248‑1 (MQ=255)
                                                                                                                                                                             gTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTta                                                                                                                                     >  1:63489/1‑248 (MQ=255)
                                                                                                                                                                             gTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCaa                                                                                             >  1:1510612/1‑288 (MQ=255)
                                                                                                                                                                              tttAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAAt                                                                                            >  2:1758239/1‑288 (MQ=255)
                                                                                                                                                                                 aaaTTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTgg                                                                                        <  2:112567/289‑1 (MQ=255)
                                                                                                                                                                                        aaCGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTa                                                                                 >  1:1016306/1‑289 (MQ=255)
                                                                                                                                                                                        aaCGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTa                                                                                 >  1:1079064/1‑289 (MQ=255)
                                                                                                                                                                                        aaCGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTa                                                                                 >  1:1665857/1‑289 (MQ=255)
                                                                                                                                                                                        aaCGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTa                                                                                 >  2:12070/1‑289 (MQ=255)
                                                                                                                                                                                              aCGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAAtt                                                                            <  2:1364188/288‑1 (MQ=255)
                                                                                                                                                                                               cGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATtgt                                                                          <  1:1421770/289‑1 (MQ=255)
                                                                                                                                                                                                  aGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCa                                                                       <  2:1359957/289‑1 (MQ=255)
                                                                                                                                                                                                  aGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCC‑TTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCa                                                                       <  1:1149777/288‑1 (MQ=255)
                                                                                                                                                                                                  aGGCCGTACCCGTAGCGACAACTAATTTTTTATCCGCGGAATAAGAAAAAACCGCAAAAGCCAGGGTACGTGCACCCAGTGAACCTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCCCGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGc                                                                        <  2:1426787/288‑1 (MQ=255)
                                                                                                                                                                                                     cGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACATACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACAAATATGAAAAAATCGTGCCAGTATTGCAACTCCGTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAACGTGTGCACt                                                                     <  2:1256362/288‑1 (MQ=255)
                                                                                                                                                                                                       gTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTTCACTCa                                                                   >  1:482681/1‑288 (MQ=255)
                                                                                                                                                                                                          tCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAacac                                                               <  1:711116/289‑1 (MQ=255)
                                                                                                                                                                                                          cccGTCGCGACAACTAATTTTTTAGCCTCGGCATGAGAAGAAACCCCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAacac                                                               <  2:1079064/288‑1 (MQ=255)
                                                                                                                                                                                                              tCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTg                                                           >  1:1212392/1‑289 (MQ=255)
                                                                                                                                                                                                                               ttATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTGATTATTTAGCGTAAAAc                                          <  1:1536905/289‑1 (MQ=255)
                                                                                                                                                                                                                                      cgGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTTCGCTAACATTGTGAACTCAACACAGTGATTATTTAGCGTAAAACCtgatga                                   >  2:1533374/1‑289 (MQ=255)
                                                                                                                                                                                                                                           tGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTGATTATTTAGCGTAAAACCTGATGaaaaaa                              <  2:1827914/289‑1 (MQ=255)
                                                                                                                                                                                                                                                   caCCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTATTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTGATTATTTAGCGTAAAACCTGATGAAAAAACAATCt                        <  2:1584015/286‑1 (MQ=255)
                                                                                                                                                                                                                                                   aaCCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAACAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCCGGTGCGCTAAAATCGTGCACTCAACACAGGGATCATTTAGCTTAAAACCTGATGAAAAACCAAACtta                      >  2:1606221/1‑288 (MQ=255)
                                                                                                                                                                                                                                                    aCCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGTGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTGATTATTTAGCGTAAAACCTGATGAAAAAACAATCTTTa                     >  2:1527514/1‑289 (MQ=255)
                                                                                                                                                                                                                                                        cAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTGATTATTTAGCGTAAAACCTGATGAAAAAACAATCTTTATGTa                 >  2:1623401/1‑289 (MQ=255)
                                                                                                                                                                                                                                                         aaaaGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAac                                                                 >  1:1932769/1‑240 (MQ=255)
                                                                                                                                                                                                                                                         aaaaGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTGATTATTTAGCGTAAAACCTGATGAAAAAACAATCTTTATGTaa                <  1:1299024/289‑1 (MQ=255)
                                                                                                                                                                                                                                                            aGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTGATTATTTAGCGTAAAACCTGATGAAAAAACAATCTTTATGTAACGa             <  1:1810771/289‑1 (MQ=255)
                                                                                                                                                                                                                                                            aGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTGATTATTTAGCGTAAAACCTGATGAAAAAACAATCTTTATGTAACGa             <  1:407304/289‑1 (MQ=255)
                                                                                                                                                                                                                                                            aGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTGATTATTTAGCGTAAAACCTGATGAAAAAACAATCTTTATGTAACGa             <  2:1212392/289‑1 (MQ=255)
                                                                                                                                                                                                                                                            aGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTGCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTGATTATTTAGCGTAAAACCTGATGAAAAAACAATCTTTATGTAACGa             <  1:1366297/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                    tCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTGATTATTTAGCGTAAAACCTGATGAAAAAACAATCTTTATGTAACGATtgtgtg      <  2:930435/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                    tCAGTGAAGCTAGTTAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTGGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTGATTATTTAGCGTAAAACCTGATGAAAAAACAATCTTTATGTAACGATtgtgtg      <  2:1552473/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                       gTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAaca                                                                >  2:497884/1‑227 (MQ=255)
                                                                                                                                                                                                                                                                       gTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTGATTATTTAGCGTAAAACCTGATGAAAAAACAATCTTTATGTAACGATTGTGtgatga  >  2:1034922/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                 |||                                                                                                                                                                                                                                                                                    
TTTTTTACGCTCGTCGGTGATGGTAATGCCCGCCAGCGCCAGATCGACGTTTTTGGTTTGCAGTGCCGGAATGATCCCACTGAAATCCATCGGCTTCAGTTCGTAATCCAGCTTCAGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGACTAACTTTTAATACAGACTTCATAGCATTTCCTTTTTTCTATCCACGGGACGATCCCCTGCGTGACATTCACATATATGAAAAAATCGTGCCAGTTTTGCAACTCCTTGATTTTTCGAGATGCGGCAAAAACGTGATGCACGATTTATAGGGCAATACCCTGAAGATGCACCATTCTGGGGCACCAATCTGGTGCGCTAAAATTGTGCACTCAACACAGTGATTATTTAGCGTAAAACCTGATGAAAAAACAATCTTTATGTAACGATTGTGTGATGA  >  CP042583/710602‑711153

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A