Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F210 I1 R1
|
4929 |
268.4 |
3907572 |
96.3% |
3762991 |
273.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
744,365 |
3 bp→TCG |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 744,365 | 0 | A | T | 99.6%
| 595.8
/ ‑5.4
| 252 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (135/116); minor base C (1/0); total (136/116) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.53e-01 |
| * | CP042583 | 744,366 | 0 | G | C | 99.6%
| 584.7
/ NA
| 252 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base C (134/116); total (136/116) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 |
| * | CP042583 | 744,367 | 0 | C | G | 99.6%
| 593.1
/ NA
| 252 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base G (134/116); total (136/116) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 252 total aligned reads displayed.
GAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGG‑CCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGCGATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTAGCGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAAGAGCGAAGTGAATCTCGGGGC‑AGGTGAAGCGGGCAGTGTGACCATACCGCGTGGGCAGCTGAAAAACCTGAAAGCGAGTTATACGTTAACGGAACCGCAGCTTACC > CP042583/744085‑744646
|||
aTGGTTAAGCCAAAAAACTGGGTCCAACCAACACTACCTGCCAGGCGGTGCACGG‑CCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGCGATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCa < 2:174114/289‑1 (MQ=255)
tGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGG‑CCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGCGATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGCATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCTGCTACCCAg > 1:1722201/1‑289 (MQ=255)
aTGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGG‑CCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGCGATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATACAATCTGGTTGCTTCGGCTCCCCAGGGcca > 2:1899814/1‑287 (MQ=255)
ccAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGG‑CCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGCGATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGatat > 1:113845/1‑289 (MQ=255)
cAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGCGATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGata < 1:355896/288‑1 (MQ=255)
aaaCTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGG‑CCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGCGATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGtt > 1:689500/1‑289 (MQ=255)
aaCTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGG‑CCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGCGATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGttt < 2:1073465/289‑1 (MQ=255)
cTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGG‑CCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGCGATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTaa < 1:382245/289‑1 (MQ=255)
tGGGTCTGACCAACACTACCGTCCAGACGGTGCACGG‑CCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGCGATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAAt < 1:1545522/289‑1 (MQ=255)
ccTTCCAGACGGTGCACGG‑CCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGCGATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGc > 2:591088/1‑289 (MQ=255)
ccTTCCAGACGGTGCACGG‑CCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGCGATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGc > 2:1875263/1‑289 (MQ=255)
cgccGGTGCACGG‑CCTGGGTGCGCCGGGGCAGTTCAGAACCGCGCGCGATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAac < 2:1693868/286‑1 (MQ=255)
caaCGGTGCACGG‑CCTGGATGCGCCGGGGCAGTTCATCACCGCGCGCGATATTGAATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAATAGTACGCCATTCATAAAGACAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTTAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAac < 1:1556611/287‑1 (MQ=255)
tGCACGG‑CCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGCGATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAaccgaccg > 2:779453/1‑289 (MQ=255)
tGCACGG‑CCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGCGATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAaccgaccg > 1:535393/1‑289 (MQ=255)
tGCACGG‑CCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGCGATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATAGGCGTTGAATCCCCGTAGTGTTGGGGGCGAAAaccgaccg > 2:1305044/1‑289 (MQ=255)
aCGG‑CCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGCGATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTAt < 2:871837/289‑1 (MQ=255)
cgcCGGGGCAGTTCAGCACCGCGCGCGATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGa > 1:1534077/1‑289 (MQ=255)
ccGGGGCAGTTCAGCACCGCGCGCGATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAg > 1:600417/1‑288 (MQ=255)
ccGGGGCAGTTCAGCACCGCGCGCGATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGt > 1:1443282/1‑289 (MQ=255)
cGGGGCAGTTCAGCCACGCGCGGGATAGGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTc < 2:1396543/289‑1 (MQ=255)
cGGGGCAGTTCAGCACCGCGCGCGATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGt < 1:1737061/288‑1 (MQ=255)
gtcaattCAGCACCGCGCGCGATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑g < 1:1042919/283‑1 (MQ=255)
ttCAGCACCGCGCGCGATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGACGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCCGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTACCCGTTTTAATGAGTCT‑GAGAAat > 2:858930/1‑289 (MQ=255)
ttCAGCACCGCGCGCGATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAat > 1:1396543/1‑289 (MQ=255)
aCCGCGCGCGATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAattat < 1:1652102/286‑1 (MQ=255)
cgcgcgATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTACTCTCCGTAGGGTTGGGGGCGAAAACCGACCGTAGCCGTTTTAATGTGTCC‑TGTATATTATTGACCTg > 2:366145/1‑289 (MQ=255)
cgcgcgATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGt > 1:1614335/1‑229 (MQ=255)
cgcgcgATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTg > 1:648320/1‑289 (MQ=255)
cgcgcgATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTg > 1:1786509/1‑289 (MQ=255)
cgcgcgATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGATTTAATGAGTCT‑GAGAACTTATTGACCTg > 2:659478/1‑289 (MQ=255)
cgcgcgATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACATTCAACAAAATTCGTCAGCCTAACCGTAAACGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATAGAATCTGGTTGCTTCGGCTACCCAGGGCGCAATGCGGTTAATCTACGTAGTGTTGGGTGCGAAAACCGGACGTATCCGTTCTTATGAGGCT‑GAGAACTTATTGaacgt > 2:1947418/1‑285 (MQ=255)
cgcgcgAGATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGt < 2:1614335/229‑1 (MQ=255)
gcgcgATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTgg > 1:65506/1‑289 (MQ=255)
ggCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGc < 2:1534077/289‑1 (MQ=255)
tGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTACTCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGcttctt > 2:1729796/1‑289 (MQ=255)
cTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGACATTATTGACCTGGGGTTTCCGCTTCTTTg > 1:1117445/1‑289 (MQ=255)
cATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGAc > 2:1188520/1‑289 (MQ=255)
aTTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGAc > 1:503444/1‑288 (MQ=255)
aTCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGttt > 1:787361/1‑188 (MQ=255)
tCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTT‑GGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAAt < 1:48637/288‑1 (MQ=255)
tgCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAaccga > 2:885856/1‑208 (MQ=255)
tgCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGa > 2:1817940/1‑289 (MQ=255)
tgCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGa > 2:1037751/1‑289 (MQ=255)
ggAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGcc < 1:1188520/289‑1 (MQ=255)
agagTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCAc < 2:483289/288‑1 (MQ=255)
agagTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCAc < 1:1305044/288‑1 (MQ=255)
agTACGCAATTCATAAAGGGAAAAAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTGTGCTGTAAGACAGCAATCTAAATGTTGATGGCATGAAGACAGGAGCCACGGCAGGCGCGGGATATAATCTGATTACTTCGGCTACCCAGGGCAATATGCGTTTAATCTCCGt < 1:192994/178‑1 (MQ=255)
aCGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTtgt > 1:777348/1‑289 (MQ=255)
cATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCGCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTCCTTTGAAACCGTGCCGCCATTT‑AAACCTGATGCCACCTTTGTGAc > 2:1400958/1‑288 (MQ=255)
ttCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCa > 2:695124/1‑289 (MQ=255)
tCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGaaaa < 2:628570/185‑1 (MQ=255)
tCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCa > 1:1405305/1‑288 (MQ=255)
tCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAg < 1:1899814/289‑1 (MQ=255)
aagagaaagagTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGt < 2:535393/289‑1 (MQ=255)
agagaaagagTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTc < 2:649736/289‑1 (MQ=255)
aaagagTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGc < 2:1142219/228‑1 (MQ=255)
aaagagTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGt > 1:1278941/1‑289 (MQ=255)
aagagTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCG‑AAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGt < 1:932746/287‑1 (MQ=255)
gTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTg < 2:1278941/287‑1 (MQ=255)
cACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACCCCAATT‑AAACCTGATGACACCTCTGTGACTCAGCGCGTCTGTTgtggtgct > 2:80772/1‑287 (MQ=255)
cTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAag > 2:1307787/1‑289 (MQ=255)
ttcaaacaaTTCGTCAGCCTAACCGGAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGGCAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAagag < 1:879521/282‑1 (MQ=255)
caacaaAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAAGAGc > 1:1431125/1‑289 (MQ=255)
aTTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTTACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTGTTGACTCAGCGCTTCTGGTTTGGTGCTAAGAACGAAGTGa > 2:1159603/1‑289 (MQ=255)
aaccgtaaccgtCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAAGAGCGAAGTGAATCTCGGGGC‑Ag < 1:577890/289‑1 (MQ=255)
accgtCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAATAGCGAAGTGAATCTGGGGGC‑AGGTGAAGc > 1:1260507/1‑289 (MQ=255)
accgtCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAAGAGCGAAGTGAAtct > 1:1565979/1‑274 (MQ=255)
accgtCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAAGAGCGAAGTGAAtct < 2:1565979/274‑1 (MQ=255)
cgtCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAAGAGCGAAGTGAATCTCGGGGC‑AGGTGAAGCgg < 1:1037751/289‑1 (MQ=255)
gtCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAAGAGCGAAGTGAATCTCGGGGC‑AGGTGAAGCggg < 1:591088/289‑1 (MQ=255)
gtCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAAGAGCGAAGTGAATCTCGGGGC‑AGGTGAAGCggg < 1:695124/289‑1 (MQ=255)
tCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGcc < 2:1839469/220‑1 (MQ=255)
tCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAAGAGCGAAGTGAATCTCGGGGC‑AGGTGAAGCgg > 1:980735/1‑287 (MQ=255)
tCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAAGAGCGAAGTGAATCTCGGGGC‑AGGTGAAGCgg > 1:425095/1‑287 (MQ=255)
tgctgTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAAGAGCGAAGTGAATCTCGGGGC‑AGGTGAAGCGGGctc < 1:1817940/289‑3 (MQ=255)
tgctgTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAAGAGCGAAGTGAATCTCGGGGC‑AGGTGAAGCGGGctc < 1:555249/289‑3 (MQ=255)
tgctgAGGAGGAGAAATCTGAATGTTGATGGCATGAAGACAGGAACAACGGCAGGCGCGGGATGTAATCTGGTTGCTTCGGCTAACCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAAGAGCGAAGTGAATCTCGGGGC‑AGGTGAAGCGGGctc < 2:376395/289‑3 (MQ=255)
tgatgtgGGGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAAGAGCGAAGTGAATCTCGGGGC‑AGGTGAAGCGGGctc < 1:1850205/286‑3 (MQ=255)
ctgTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAAGAGCGAAGTGAATCTCGGGGC‑AGGTGAAGCGGGctcag > 2:271630/1‑285 (MQ=255)
tgtgGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAAGAGCGAAGTGAATCTCGGGGC‑AGGTGAAGCGGGctcag < 2:1459679/288‑5 (MQ=255)
tgGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAAGAGCGAAGTGAATCTCGGGGC‑AGGTGAAGCGGGctcagtg < 2:557107/288‑7 (MQ=255)
gAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAAGAGCGAAGTGAATCTCGGGGC‑AGGTGAAGCGGGCTCAGTGAcc > 1:1885909/1‑289 (MQ=255)
agcagcAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTTACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTGTGGTGAGAAGAGCGAAGTGAATCACGGGGC‑CGGTGAAGCCGGctcattgacc > 2:1793390/1‑279 (MQ=255)
agcagcAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAAGAGCGAAGTGAATCTCGGGGC‑AGGTGAAGCGGGctcaggtacca > 1:365292/1‑279 (MQ=255)
agcaATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAAGAGCGAAGTGAATCTCGGGGC‑AGGTGAAGCGGGCTCAGTGACCAt < 1:863414/287‑1 (MQ=255)
aaTGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCACTT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTTGTGATAACAGCGAAGTGATTCTCGGGCC‑AGGTGAAGCGGGCTCAGGGCCCATACCGCGGGGGc > 2:1126427/1‑289 (MQ=255)
gATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATATTTGGGTTCTTCGGCCAACCAAGGCGGTTATCCGTTT‑ATCTCCGGAATGGTTGGGGCGGAAACCCGCCGGAACCGGTTTTAAGAGTCTGGAGAATTAATGAACCTGGGGTTCCGGCTCCTTGGAAA‑CGTTACGGCAATTAAAACTTAATGCACCCTTTGGGCCCCTGCCCGCCTGGTTTGGTGAT‑AGAGGGGAGGGAATTCCGGGGCAAGGGGAACGGGGCGCGGTGACCATCCGGCGTGGGCaccgga > 2:295224/1‑284 (MQ=255)
aCAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATAGGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCAGTTTTAAGGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCAAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAAGAGCGAAGTGAATCTCGGGGC‑AGGTGAAGCGGGCTCAGTGACCATACCGCGTGGGCAGCTGAAAAACCTGAAAg < 1:209309/289‑1 (MQ=255)
aGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAAGAGCGAAGTGAATCTCGGGGC‑AGGTGAAGCGGGCTCAGTGACCATACCGCGTGGGCAGCTGAAAAACCTGAAAGCg > 2:1703145/1‑289 (MQ=255)
ggAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGAcc > 1:319848/1‑129 (MQ=255)
ggAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGAcc < 2:319848/129‑1 (MQ=255)
ggAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAAGAGCGAAGTGAATCTCGGGGC‑AGGTGAAGCGGGCTCAGTGACCATACcgcg < 2:466314/263‑1 (MQ=255)
ggAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAAGAGCGAAGTGAATCTCGGGGC‑AGGTGAAGCGGGCTCAGTGACCATACcgcg > 1:466314/1‑263 (MQ=255)
cGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTTACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCTTCTGGTTTGGTGATAAGAGCGAAGTGAATCTCGGGGC‑AGGTGATGCGGGCTCAGTGTCCATACCCCGTGGGCAGCTGACACACCTGCAAGCGTGTtat > 2:823338/1‑287 (MQ=255)
ggCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAAGAGCGAAGTGAATCTCGGGGC‑AGGTGAAGCGGGctc > 2:1422093/1‑234 (MQ=255)
gcgGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAAGAGCGAAGTGAATCTCGGGGC‑AGGTGAAGCGGGCTCAGTGACCATACCGCGTGGGCAGCTGAAAAACCTGAAAGCGAGTTATACGTTAACgg < 1:1703145/289‑1 (MQ=255)
gATATAATCTGGTTGCTTCGGCTACCCTGGGCGATATGTGTTTAATCTCCGTAGTGTTGTGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCTCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGTTGATAAGAGCGAAGTGAATCTCGGGGC‑AGGTGAAGCGGGCTCAGTGACCATACCGCGTGGGCAGCTGAAAAACCTGAAAGCGAGTta < 1:1601883/274‑1 (MQ=255)
ataATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAAGAGCGAAGTGAATCTCGGGGC‑AGGTGAAGCGGGCTCAGTGACCATACCGCGTGGGCAGCTGAAAAACCTGAAAGCGAGTTATACGTTAACGGAACCGCa < 1:271630/289‑1 (MQ=255)
ggTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAAGAGCGAAGTGAATCTCGGGGC‑AGGTGAAGCGGGCTCAGTGACCATACCGCGTGGGCAGCTGAAAAACCTGAAAGCGAGTTATACGTTAACGGAACCGCAGCTTac > 2:1477501/1‑288 (MQ=255)
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GAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGG‑CCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGCGATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTAGCGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCT‑GAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATT‑AAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAAGAGCGAAGTGAATCTCGGGGC‑AGGTGAAGCGGGCAGTGTGACCATACCGCGTGGGCAGCTGAAAAACCTGAAAGCGAGTTATACGTTAACGGAACCGCAGCTTACC > CP042583/744085‑744646
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
