Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F210 I1 R1
|
4929 |
268.4 |
3907572 |
96.3% |
3762991 |
273.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
749,472 |
3 bp→CGA |
intergenic (–/–) |
– / – |
–/– |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 749,472 | 0 | G | C | 98.5%
| 459.8
/ NA
| 202 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/3); new base C (108/91); total (108/94) |
| Fisher's exact test for biased strand distribution p-value = 9.90e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 749,473 | 0 | C | G | 99.5%
| 466.8
/ NA
| 202 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base G (108/92); total (108/94) |
| Fisher's exact test for biased strand distribution p-value = 4.63e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 749,474 | 0 | T | A | 97.5%
| 457.3
/ NA
| 202 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (107/89); minor base G (0/5); total (108/94) |
| Fisher's exact test for biased strand distribution p-value = 2.11e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 202 total aligned reads displayed.
CGGTCGTTGCTACCACACTGACGCGGGTTGGTGCATCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGGCTGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGGC‑TGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGATTGCCTGAATGGCGATATAAATAGGTGCGATACCTACCAGCGCCGCCAATAAAATGTGCACCGTTGCCGGAACGCCAAAGGCCG > CP042583/749195‑749749
||||
cGGTCGTTGCTACCACACTGACGCGGGTTGGTGCATCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGt < 1:660534/289‑1 (MQ=255)
cGGTCGTTGCTACCACACTGACGCGGGTTGGTGCATCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGt < 1:1502771/289‑1 (MQ=255)
cTGACGCGGGTTGGTGCATCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAggg > 1:1043470/1‑276 (MQ=255)
cTGACGCGGGTTGGTGCATCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGa > 1:1793572/1‑288 (MQ=255)
ggcgGGTTGGTGCACCGGGGCCGGTAGCCGTGGCGGGAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCAAGAGTACAACGGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACGGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTc < 2:891545/288‑1 (MQ=255)
cgcgGGTTGGTGCATCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTc < 1:1619037/289‑1 (MQ=255)
gtgcgggaaTCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGCCACCCCAGCGACCCAGGCGATATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAAcc < 2:1630389/280‑1 (MQ=255)
gTTGGTGCATCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAAcc < 1:1086708/288‑1 (MQ=255)
gTGCATCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATtaa > 2:1204762/1‑289 (MQ=255)
tggaTCGGGGCCGGGATCCGTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATtaa < 2:1132460/285‑1 (MQ=255)
tGCAGCGGGGCCGGTATCGCTGGCGGCAGGAAGGGTCAGCGGGAAGGCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATtaa < 2:636105/288‑1 (MQ=255)
ggCATCGGGGGCTGTGTCCCTGCCGGCAGAAAGAGTGAACGGGAACCCCATCGCAGCACCAAGACCCCCGAGGACAGAAGACACCCCAGCGACCCTGGCGCGATCGCAAGAAATAATCAGCGCGGTACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGGAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCACtaa < 2:834586/287‑1 (MQ=255)
cctCGGAGCCGGTGTCGATGGCGGCAGCAATGGGCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGGACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAAAGACCACATAAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATtaata < 2:479460/286‑1 (MQ=255)
aaggggcaccGGGAAACCCAGCGAGGCACCCGGTCCCCAAAGAACAACAGACACCCCAACGACCCAGGCGCAATCGACAAAAATAATCAGCCCAAACACCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTACAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCtt < 2:1260996/278‑1 (MQ=255)
agcgaGCCAAGGGAGGAACCCGGACCCCAGAGAAAAACAGACACCCCAGGCACACAGGGGCTATCGACAGAAAGAAGCAGCACAAGTCCCACCGCCCCCATAAGTGACCTGGCCCGAACCGCGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGTTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAAGCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGcc < 2:1539920/284‑1 (MQ=255)
aaGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATc > 1:1299489/1‑288 (MQ=255)
ccagcacggCACCCAGTCCCCAAAGTACAACAGACACCCCCGCGCCCCCGGCGCGATCGACAAAAATAATCAGCCCAATACCCACCGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAg < 2:1052288/282‑1 (MQ=255)
gaggCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑cacca < 2:335690/287‑1 (MQ=255)
cccAGAGTACAACAGCCACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCACTACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCT‑AAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATcagc < 1:253253/289‑1 (MQ=255)
ccAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATcagc < 1:1398616/289‑1 (MQ=255)
ccAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATcagc < 1:344647/289‑1 (MQ=255)
agagTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATTAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCCATAATAAGGGTAACCAGACGTTGGCAGAACCTTCGGCAAAAGCCACAGCCAGACACCAC‑ACACCCATcagacg > 2:1699095/1‑286 (MQ=255)
gTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAgcagca < 1:1204762/288‑1 (MQ=255)
cgcaaaagaccacCCAACCGACCCAGACGCAAGAGAAAAAATGACTAAGCCCACTACCCGTCGCCCCAATCGGTGCACTGGCCCGAACCGGAGCAACGCGACAGAAACGATCGACGAACAAAACGCCGGTGAAGCGTCCAACAGTAATCCGCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAGGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCaa < 2:1071198/279‑1 (MQ=255)
aacaGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCacaa < 1:455827/269‑1 (MQ=255)
aacaGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCacaa > 2:455827/1‑269 (MQ=255)
acacCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAAcc > 1:1007381/1‑203 (MQ=255)
acacCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACCCCTATCAGCAGCAACCGGatac > 2:1899449/1‑287 (MQ=255)
cacCCCAGCGACCCAGGCGCAATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATcg < 1:1165332/289‑1 (MQ=255)
acCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATcg > 2:1927173/1‑288 (MQ=255)
acCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACAAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCGG‑CACCCCAACACCTATCACCCGCAACTGGaatacgc > 2:1594421/1‑283 (MQ=255)
cccAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑CGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGCGGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CCCCACAACACCTATCAACAGCAACCGGATATcgcgc > 1:974929/1‑288 (MQ=255)
gcgCGACCCAGGCGCGAACGACAAAAATCAGCGAGCCAATACCCAACGGCCCCAATAGGGCACTGGACCGAACCACGGCAACGCGACTGTAACGGTGGATGAACCAACCGCCGGTGAAGAGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATa < 2:1299489/287‑1 (MQ=255)
aGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATaa > 1:1371525/1‑289 (MQ=255)
aGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGCAGGGCTCAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATAGCCGG‑CACCACAACACCTATCAGCGACAACTGGATATCGCGATaa > 2:1242715/1‑289 (MQ=255)
cAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGt > 1:472908/1‑288 (MQ=255)
aTCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAATCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGTCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATAACGCCATAAAAAGGTACGCCgttt > 2:669420/1‑289 (MQ=255)
aTCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCg < 1:1631110/202‑1 (MQ=255)
aTCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCtttt > 2:1685081/1‑289 (MQ=255)
aTCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCtttt > 2:957082/1‑289 (MQ=255)
aaaaaaTAATCAGCCCAACACCCAACGCCCACATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGcc < 1:1256841/288‑1 (MQ=255)
aatCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTgg < 1:33498/289‑1 (MQ=255)
aaTACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCg > 1:1488223/1‑289 (MQ=255)
aaCGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCAt > 1:878835/1‑289 (MQ=255)
aCGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCAtt > 2:1620014/1‑289 (MQ=255)
cGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTTCCATCGGCAGCAttt > 1:316244/1‑289 (MQ=255)
cGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCAttt > 1:1537264/1‑289 (MQ=255)
ccccATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCAttttt > 2:373154/1‑288 (MQ=255)
ccccATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATAAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACTTATCAGCAGCCACTGGATATTGCGATAAAAAGGTACGCCTTTTTCGCCATTCTGTCTGCAATCCGCAGCATGTTTg > 2:469902/1‑289 (MQ=255)
ccccATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCAT‑CCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTg > 1:1867575/1‑288 (MQ=255)
ttAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGt < 1:639190/289‑1 (MQ=255)
taagggaCTGGCCCGAACCCCGGCAACGCGACTGTAACGGTCAATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTa < 2:593116/283‑1 (MQ=255)
tAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTa < 1:1564077/289‑1 (MQ=255)
gaGTGCACGGGCCCGAACAACGGCGACGCGACTGTAACGGTCGGTGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTa < 2:1652526/288‑1 (MQ=255)
gCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGt < 1:1685081/289‑1 (MQ=255)
tGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGTAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAgg > 2:224748/1‑289 (MQ=255)
tGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAgg > 1:1446475/1‑289 (MQ=255)
gCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCacaa < 1:1111821/193‑1 (MQ=255)
gCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTTCCCGTACCGTCAGGGa > 1:1777490/1‑289 (MQ=255)
gCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGt < 1:158860/283‑1 (MQ=255)
gCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGt > 2:158860/1‑283 (MQ=255)
gCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGa > 2:268398/1‑289 (MQ=255)
gCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGa > 1:1652526/1‑289 (MQ=255)
gCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAC‑CACCACAACACCGATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTGTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCGCGTCCCTCCAgg > 2:1280671/1‑287 (MQ=255)
cGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGATGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGAtt > 1:1359049/1‑288 (MQ=255)
cGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCAtt > 1:1702133/1‑125 (MQ=255)
cGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCCATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTACGGCATTGCCTGAAt > 2:1017926/1‑289 (MQ=255)
ggCACCGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACAGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGATTGCCTGAATg < 1:1551517/289‑1 (MQ=255)
gataCGCGACTGTCAAGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGTGCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATGAAGAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGATTGCCTGAATg < 2:1149375/285‑1 (MQ=255)
cacgccgACTGAAACGGTCGATGAACCAACCGCCGGGGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGATTGCCTGAATgg < 2:16457/283‑1 (MQ=255)
aaCGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGATTGCCTGAATGGCg < 1:224748/289‑1 (MQ=255)
aaCGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGATTGCCTGAATGGCg < 2:879785/289‑1 (MQ=255)
cgACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGATTGCCTGAATGGCGatat > 1:697470/1‑289 (MQ=255)
tGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGATTGCCTGAATGGCGATATAAAt < 1:1899449/289‑1 (MQ=255)
tAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAACGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGACTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGATTGCCTGAATGGCGATATAAATAg > 2:650677/1‑289 (MQ=255)
gTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGATTGCCTGAATGGCGATATAAATAGGTGCg > 1:197724/1‑289 (MQ=255)
tCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGATTGCCTGAATGGCGATATAAATAGGTGCg < 1:1927173/288‑1 (MQ=255)
cGATGAACCAACGGCAGGGGAAGCGTCGAACGGTCATCCCCAGGGTAAAACAGGAATAAATCAGCG‑AGCAGGAAGGAGGGCGAAAGACGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGATTGCCTGAATGGCGATATAAATAGGTg < 2:1753275/285‑1 (MQ=255)
cGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGATTGCCTGAATGGCGATATAAATAGGTGCGAt > 1:565052/1‑289 (MQ=255)
aaccGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGATTGCCTGAATGGCGATATAAATAGGTGCGATACCTACCa > 1:1183275/1‑288 (MQ=255)
aaccGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCAATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGATTGCCTGAATGGCGATAGAAATAGGTGCGATACCTACCa > 1:237322/1‑288 (MQ=255)
cgccgGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGATTGCCTGAATGGCGATATAAATAGGTGCGATACCTACCAgcgc < 1:669420/289‑1 (MQ=255)
cgGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGATTGCCTGAATGGCGATATAAATAGGTGCGATACCTACCAGcgccg < 2:512812/288‑1 (MQ=255)
gTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGATTGCCTGAATGGCGATATAAATAGGTGCGATACCTACCAGCGCCGCCa > 1:376818/1‑289 (MQ=255)
tGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAGGGTAAGCCTTTTTCGCCATGCTGGGTGCCCTCGGCAGCATTTTTGCCCGTACCGTCAGGGATTGCCTGAATGGCGATATAAATAGGTGCGATACCTCACACGGCCGCCaa > 2:1517632/1‑289 (MQ=255)
acgtgcaaagggTGATCCCAAGGGTAAACCCGGCAAAAATCGGCG‑AGCCGGAAGTAGGGATAAACCCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCGGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGATTGCCTGAATGGCGATATAAATAGGTGCGATACCTACCAGCGCCGCCAATaa < 2:646878/279‑1 (MQ=255)
aGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGATTGCCTGAATGGCGATATAAATAGGTGCGATACCTACCAGCGCCGCCAATaa > 2:197129/1‑289 (MQ=255)
gTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGATTGCCTGAATGGCGATATAAATAGGTGCGATACCTACCAGCGCCGCCAATaaa < 1:957082/287‑1 (MQ=255)
tCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGATTGCCTGAATGGCGATATAAATAGGTGCGATACCTACCAGCGCCGCCAATAAAAtg > 1:12392/1‑289 (MQ=255)
aCGGTCATCCCGAGTGTAAAACCGGAAACAAT‑AGGCAGGCAGGAAGGAGGGCTAAAACCGTGACCGTCAACCATGAATAAGGGTAACGAGACGTTGGCAGACCCTTCGGCAAAGGCCGTCGCCAG‑CACCACAACACCTAGCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCAGCGGCAGCATTTTTGCCCGTACCGTCAGGGATTGCCTGAATGGCGATATAAATAGGTGCGATACCTACCAGCGCCGCCAATAAAATGTGCa < 2:236974/289‑1 (MQ=255)
cGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGATTGCCTGAATGGCGATATAAATAGGTGCGATACCTACCAgcgc > 1:1325526/1‑271 (MQ=255)
cGGTCATCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGATTGCCTGAATGGCGATATAAATAGGTGCGATACCTACCAgcgc < 2:1325526/271‑1 (MQ=255)
aTCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCg > 2:1456423/1‑177 (MQ=255)
tCCCCAGGGTAAAACCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATg < 2:1405601/181‑1 (MQ=255)
aaaCCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGATTGCCTGAATGGCGATATAAATAGGTGCGATACCTACCAGCGCCGCCAATAAAATGTGCACCGTTCCCGACAAGCCaa > 2:734391/1‑289 (MQ=255)
cccGGCATAAATCAGCG‑GGCCGGAAGTAGGGCTAAAACCGTGACCGCCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑AACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGATTGCCTGAATGGCGATATAAATAGGTGCGATACCTACCAGCGCCGCCAATAAAATGTGCACCGTTGCCGGAACGCCAAAg < 2:697470/288‑1 (MQ=255)
aCCGGCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGATTGCCTGAATGGCGATATAAATAGGTGCGATACCTACCAGCGCCGCCAATAAAATGTGCACCGTTGCCGGAACGCCAAAg < 1:435138/289‑1 (MQ=255)
gCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGATTGCCTGACTGGCGATAGAAATAGGTGCGATACCTACCAGCGCCGCCAATAAAATGTGCACCGTTGCCGGAACGCCAAAGGCCg > 1:809102/1‑289 (MQ=255)
gCATAAATCAGCG‑AGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGATTGCCTGAATGGCGATATAAATAGGTGCGATACCTACCAGCGCCGCCAATAAAATGTGCACCGTTGCCGGAACGCCAAAGGCCg > 1:924603/1‑289 (MQ=255)
cATAAATCAGCG‑AGCCGGAAGTAGGACTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGATTGCCTGAATGGCGATATAAATAGGTGCg < 1:649521/233‑1 (MQ=255)
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CGGTCGTTGCTACCACACTGACGCGGGTTGGTGCATCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGGCTGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGGC‑TGCCGGAAGTAGGGCTAAAACCGTGACCGTCAACCATTAATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG‑CACCACAACACCTATCAGCAGCAACTGGATATCGCGATAAAAAGGTACGCCTTTTTCGCCATGCTGGGTGCCATCGGCAGCATTTTTGCCCGTACCGTCAGGGATTGCCTGAATGGCGATATAAATAGGTGCGATACCTACCAGCGCCGCCAATAAAATGTGCACCGTTGCCGGAACGCCAAAGGCCG > CP042583/749195‑749749
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A